CATH Superfamily 3.30.70.330

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Enzyme?	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
43755	50S ribosomal protein L23	33671	EC	3D	3j7zT00	-	88.2
43271	Embryonic polyadenylate-binding protein B	7853	EC	3D	1cvjA02	-	82.0
43624	Multiple RNA-binding domain-containing protein 1	6616	EC	3D	1whxA00	-	80.5
43661	Peptidyl-prolyl cis-trans isomerase-like 4	5746	EC	3D	1x5tA01	-	80.7
43574	RNA-binding motif, single-stranded-interacting protein 2	4858	EC	3D	1b7fA02	-	83.2
43727	Splicing factor u2af large subunit	4826	EC	3D	1o0pA00	-	84.3
43242	Splicing factor, arginine/serine-rich 1	3724		3D	2i2yA02	-	88.9
43241	RNA recognition motif 1	3356	EC	3D	1u6fA00	-	87.4
42484	ELAV-like protein 2	3331	EC	3D	3hi9A00	-	86.5
42834	ELAV-like protein 2	3299	EC		-	-	84.3
43231	Nucleolysin TIA-1 isoform p40	3278	EC	3D	2dgoA01	-	81.8
43268	Cleavage stimulation factor subunit 2	3157	EC	3D	2g4bA02	-	82.1
43620	Nucleolysin TIA-1 isoform p40	2842	EC	3D	2mjnA02	-	84.5
43715	Pre-mRNA-splicing factor SLT11, putative	2661		3D	2ytcA01	-	88.6
42156	Bruno-3 transcript variant 3	2659	EC	3D	2khcA00	-	84.2
43148	Embryonic polyadenylate-binding protein B	2631	EC	3D	1cvjA01	-	86.8
43688	Small nuclear ribonucleoprotein U	2598	EC	3D	4pkdB01	-	94.5
43708	Heterogeneous nuclear ribonucleoprotein Q	2597	EC	3D	2dguA00	-	77.6
42613	Heterogeneous nuclear ribonucleoprotein Q	2493	EC		-	-	82.1
43739	Splicing factor, arginine/serine-rich 4	2446	EC	3D	1wg4A01	-	70.7
42518	Nuclear cap-binding protein subunit 2	2436		3D	1h2tZ00	-	80.0
43381	Heterogeneous nuclear ribonucleoprotein R	2403	EC	3D	2disA01	-	81.2
43362	RNA-binding protein 8A	2237	EC	3D	1hl6A00	-	81.8
42820	Embryonic polyadenylate-binding protein 2	2120		3D	3b4dA00	-	88.7
43405	Heterogeneous nuclear ribonucleoprotein H	2117		3D	2hgmA01	-	81.7
42446	Heterogeneous nuclear ribonucleoprotein A1	2089		3D	1ha1A01	-	90.8
42042	Heterogeneous nuclear ribonucleoprotein A1	1969		3D	1ha1A02	-	88.7
43225	RNA recognition motif-containing protein	1940	EC	3D	2cqdA01	-	93.6
43138	RNA-binding protein Musashi homolog 1	1916		3D	2mssA00	-	89.9
43546	Heterogeneous nuclear ribonucleoprotein L	1904	EC	3D	1qm9A01	-	90.5
43051	U1 small nuclear ribonucleoprotein	1888		3D	4pkdB02	-	82.5
43210	Eukaryotic translation initiation factor	1745	EC	3D	2cq0A00	-	83.7
43123	Polypyrimidine tract-binding protein 1	1687	EC	3D	1sjrA00	-	88.7
43587	HIV Tat-specific factor 1	1569	EC	3D	2ditA01	-	96.7
43402	Heterogeneous nuclear ribonucleoprotein H	1471		3D	2hgnA00	-	92.0
43560	Negative regulator of differentiation 1	1396		3D	2rt3A00	-	97.3
42416	CUGBP Elav-like family member 4	1395		3D	2dnoA00	-	70.8
42329	Heterogeneous nuclear ribonucleoprotein HRP1	1374		3D	2cjkA01	-	86.8
43371	Protein MEI2-like 3	1356			-	-	83.4
42808	RNA binding protein fox-1 homolog	1342		3D	2cq3A00	-	85.3
43071	Transformer-2 protein homolog alpha	1308		3D	2kxnB01	-	87.4
43197	Splicing factor 3B subunit 4	1258	EC	3D	1x5uA01	-	87.5
43550	RNP-1 like RNA-binding protein	1095	EC		-	-	89.3
43396	Split ends, isoform F	1006	EC	3D	4p6qA02	-	89.3
42409	Heterogeneous nuclear ribonucleoprotein A/B	976			-	-	89.1
43127	Cytoplasmic polyadenylation element-binding protein 3	974		3D	2mkiA02	-	82.4
42175	CUGBP Elav-like family member 2	962		3D	2dhsA01	-	80.6
41837	CUGBP Elav-like family member 2	947		3D	2dhsA02	-	72.3
42925	Splicing factor, arginine/serine-rich 2	933		3D	2kn4A02	-	77.7
42637	Polypyrimidine tract-binding protein 1	930	EC	3D	1qm9A02	-	98.9
43921	Histone-lysine N-methyltransferase, H3 lysine-4 specific	923	EC		-	-	87.1
42000	Nucleolysin TIA-1 isoform p40	921		3D	2cqiA00	-	67.8
42335	Cytoplasmic polyadenylation element-binding protein 3	913		3D	2dnlA01	-	86.4
43555	Eukaryotic translation initiation factor 4B	894		3D	1wi8A01	-	84.9
43876	Cleavage and polyadenylation-specificity factor subunit 7	854		3D	3p5tL00	-	90.1
43777	Nucleolar protein 12	843			-	-	86.8
43483	Probable RNA-binding protein 18	836			-	-	75.6
42087	Probable RNA-binding protein 23	832		3D	2jrsA01	-	92.7
43019	U2 small nuclear ribonucleoprotein B''	808		3D	2aymA00	-	99.7
42390	Trinucleotide repeat-containing gene 6B protein	804			-	-	71.6
43261	Multiple RNA-binding domain-containing protein 1	802		3D	2cpfA00	-	93.3
43084	RNA recognition motif-containing protein	765			-	-	94.8
42427	RNA-binding protein with multiple splicing	763	EC	3D	5cyjA00	-	89.0
42356	Splicing factor, arginine/serine-rich 1	753		3D	2m7sA01	-	66.4
42230	Polypyrimidine tract-binding protein 1	725		3D	1sjqA00	-	93.3
43653	RNA-binding protein with serine-rich domain 1	720			-	-	88.7
43117	Single-strand telomeric DNA-binding protein GBP2	720	EC	3D	2mzqA00	-	87.9
43504	MEI2-like protein 5 isoform 1	678			-	-	82.4
41603	Poly U	677	EC	3D	2kxfA01	-	84.1
43344	Putative splicing factor C222.18	675			-	-	90.5
42372	RNA-binding motif, single-stranded-interacting protein 1	666		3D	1x4eA00	-	74.8
42615	Splicing factor U2AF 65 kDa subunit	641		3D	1u2fA00	-	83.1
42990	Epithelial-splicing regulatory protein 1	623		3D	2rvjA01	-	91.9
42504	Insulin-like growth factor 2 mRNA-binding protein 3	600		3D	2e44A01	-	82.9
82	Probable RNA-binding protein 23	598		3D	2mhnA01	-	78.0
42341	CUGBP Elav-like family member 4	597		3D	2dgqA00	-	86.6
42020	Heterogeneous nuclear ribonucleoproteins C1/C2	596		3D	1wf2A00	-	96.3
42309	Heterogeneous nuclear ribonucleoprotein D0	588		3D	1hd0A00	-	88.7
43097	Splicing factor, proline-and glutamine-rich	587		3D	4wiiA02	-	74.2
43559	40S ribosomal protein S24	574		3D	1ywxA01	-	98.5
41962	Epithelial-splicing regulatory protein 1	570			-	-	75.1
42092	Scaffold attachment factor B1	558			-	-	89.5
42610	Multiple rna-binding domain-containing protein 1	557			-	-	87.8
43118	Protein MEI2-like 2	556			-	-	97.6
42466	La ribonucleoprotein domain family, member 4	553			-	-	84.4
43342	Heterogeneous nuclear ribonucleoprotein H	522		3D	2hglA01	-	92.4
43604	RNA binding protein AFU_orthologue; AFUA_5G08330	521			-	-	90.1
41627	Poly U	512		3D	2kxfA02	-	72.9
43069	THO complex subunit 4	510		3D	3ulhA00	-	92.2
43589	Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1	508			-	-	84.3
42762	Heterogeneous nuclear ribonucleoprotein M	500		3D	2do0A01	-	91.2
42908	RNP domain protein AFU_orthologue AFUA_6G12300	498			-	-	68.1
43690	Regulatory protein E2	490		3D	1by9A00	-	92.0
42796	Pre-mRNA splicing factor cwc2	487			-	-	84.4
43647	Nuclear transport factor 2 family protein	472			-	-	83.4
41967	Poly U	466		3D	3dxbA02	-	39.3
42839	Splicing factor, arginine/serine-rich 15	464			-	-	92.7
43304	Pre-rRNA-processing protein ESF2	454			-	-	94.7
43186	29 kDa ribonucleoprotein, chloroplastic	452			-	-	91.6
43020	29 kDa ribonucleoprotein, chloroplastic	445			-	-	89.0
43029	RNA-binding motif protein, X chromosome	430		3D	2mb0B01	-	98.8
43413	tRNA selenocysteine 1-associated protein 1	415		3D	2divA01	-	92.0
42225	Heterogeneous nuclear ribonucleoprotein L	400		3D	2e5iA01	-	87.1
43576	RNA-binding protein 34	395			-	-	87.8
43833	Heterogeneous nuclear ribonucleoprotein L	392		3D	3r27A01	-	91.9
42451	Cold-inducible RNA-binding protein A	391		3D	1x5sA01	-	88.3
41928	Polyadenylate-binding protein-interacting protein 11	389			-	-	69.6
43636	Mitochondrial escape protein 2	382	EC		-	-	99.0
42342	Paraspeckle component 1	378		3D	4wiiA01	-	77.7
42895	mRNA binding post-transcriptional regulator	370			-	-	87.7
43527	RNA recognition motif RRM	368			-	-	85.9
42852	Insulin-like growth factor 2 mRNA-binding protein 3	366		3D	2cqhA00	-	93.8
43704	Serine/arginine-rich splicing factor RS40	364			-	-	87.2
42866	Polypyrimidine tract-binding protein-like protein	364	EC		-	-	82.8
42353	Regulator of nonsense transcripts 3B	356		3D	1uw4A00	-	85.7
42636	Glycine-rich RNA-binding protein 2	346		3D	2mpuA00	-	84.4
42756	Serrate RNA effector molecule homolog	344			-	-	86.4
41624	Polypyrimidine tract-binding protein 1	342	EC		-	-	78.2
20448	DAZ-associated protein 1	338		3D	2dh8A01	-	48.9
42611	Nuclear RNA export factor 1	337		3D	1kohA01	-	97.0
42382	RNA-binding post-transcriptional regulator cip2	333			-	-	84.5
43082	RNA-binding motif protein 4B	329		3D	2dnqA01	-	92.6
41794	Serine/arginine-rich splicing factor 10	324			-	-	92.2
43612	Ribosome biogenesis Nop4	312			-	-	83.8
42221	RNA-binding protein 25	311			-	-	88.0
43063	Splicing factor, arginine/serine-rich 11	307			-	-	80.3
41759	Splicing factor U2af large subunit A	299			-	-	76.3
43164	RNA-binding protein 28	294			-	-	89.8
41775	TAR DNA-binding protein 43	289		3D	1wf0A01	-	87.9
43176	Zinc finger CCCH domain-containing protein 18	288			-	-	73.7
41918	cDNA clone:J013002B05, full insert sequence	287			-	-	79.9
43380	TAR DNA-binding protein 43	287		3D	2cqgA01	-	69.1
41799	TATA-binding protein-associated factor 2N	285		3D	2la6A01	-	79.4
43529	Chloroplast 30S ribosomal protein 2	282			-	-	94.1
41625	Ecto-NOX disulfide-thiol exchanger 2	278			-	-	67.0
16920	Nuclear cap-binding protein, putative	277			-	-	35.4
43388	Peroxisome proliferator-activated receptor gamma coactivator 1-alpha	274			-	-	93.6
42824	Cytoplasmic polyadenylation element-binding protein 1	253		3D	2mkhA02	-	66.4
42876	RNA-binding protein 12	253		3D	2ek1A00	-	84.6
27251	Serine/arginine-rich splicing factor 5	253			-	-	36.6
42039	Polyadenylate-binding protein-interacting protein 11	253			-	-	84.7
42255	Serine/arginine-rich splicing factor 4	252			-	-	83.3
33524	Regulator of calcineurin 2	249			-	-	44.4
43630	Single-stranded TG1-3 DNA-binding protein	246			-	-	95.1
2410	Uncharacterized protein	237			-	-	51.8
43315	Zinc finger CCCH domain-containing protein 16	236			-	-	79.0
32275	Heterogeneous nuclear ribonucleoprotein M	235		3D	2dgvA01	-	61.7
41906	RNA-binding motif protein 4B	234		3D	2dgtA01	-	60.7
42587	Deleted in azoospermia protein 2	223		3D	2xs2A00	-	80.2
43121	Probable RNA-binding protein 19	222			-	-	87.6
42906	Myelin expression factor 2	219			-	-	84.4
41825	Non-POU domain-containing octamer-binding protein	219		3D	3sdeB01	-	77.7
14126	Msx2-interacting protein	215		3D	4p6qA03	-	70.8
43421	Flowering time control protein FCA	208			-	-	94.6
43111	Cytoplasmic polyadenylation element-binding protein 1	207			-	-	75.1
43851	Ribonucleoprotein PTB-binding 1-like protein	207		3D	3h2uB03	-	80.4
42016	Putative RNA-binding protein 15B	203			-	-	45.9
153	Ras GTPase-activating protein-binding protein 2	203			-	-	50.2
43855	tRNA uracil-5-	201	EC		-	-	86.0
42473	Probable RNA-binding protein 19	198		3D	2cphA01	-	83.0
43383	Flowering time control protein FCA	196			-	-	88.6
42070	Ras GTPase-activating protein-binding protein 1	194	EC		-	-	81.3
18274	Splicing regulatory glutamine/lysine-rich protein 1	192			-	-	68.7
42886	Sex lethal, isoform X	189		3D	1b7fA01	-	86.6
43061	Eukaryotic translation initiation factor 3 subunit B	188			-	-	64.1
3940	Peroxisome proliferator-activated receptor gamma coactivator-related protein 1	186			-	-	81.8
13920	Uncharacterized protein	185			-	-	46.3
42488	MKI67 FHA domain-interacting nucleolar phosphoprotein	183			-	-	90.9
41832	Poly A	182	EC	3D	1whvA00	-	58.7
44001	Nuclear RNA export factor 1	182			-	-	83.5
42294	Mitochondrial ribosomal protein L23	182		3D	3j7yU00	-	93.9
43565	U1 small nuclear ribonucleoprotein usp102	179			-	-	90.0
43090	Activator of basal transcription 1	172			-	-	88.9
31382	Hsh49p	171			-	-	2.5
27135	Hsh49p	170			-	-	0.0
34902	Uncharacterized protein	170			-	-	14.8
41500	THO complex subunit 4	166	EC	3D	2f3jA02	-	71.9
43935	Synaptojanin-2	165	EC		-	-	90.7
1653	U2 snRNP-associated SURP motif-containing protein	165			-	-	72.8
4194	Spen homolog, transcriptional regulator Drosophila	164			-	-	33.2
42702	Nucleolin, isoform CRA_c	163		3D	2krrA02	-	90.8
43533	AT-rich interactive domain-containing protein 4B	162			-	-	94.9
42721	Lupus La protein homolog	159		3D	1s79A00	-	90.2
6252	Protein boule-like protein	157			-	-	91.4
43277	Eukaryotic translation initiation factor 3 subunit G	156			-	-	93.1
20643	Ist3p	156		3D	2mkcA00	-	36.4
43540	Poly A	155			-	-	89.0
42157	Polyadenylate-binding protein, cytoplasmic and nuclear	154			-	-	85.3
43881	RNA annealing protein YRA2	154		3D	2wbrA00	-	90.7
42467	Nucleolin, isoform CRA_c	152		3D	2fc9A00	-	85.6
43336	RNA recognition motif-containing protein	150			-	-	88.5
43840	BRCA1 associated protein variant	149	EC		-	-	77.2
15327	Polymerase delta-interacting protein 3	147			-	-	61.7
42950	Uncharacterized RNA-binding protein C660.15	146			-	-	90.8
19844	Heterogeneous nuclear ribonucleoprotein A0	145			-	-	76.7
41424	Heterogeneous nuclear ribonucleoprotein M	145			-	-	57.6
41782	RNA-binding protein 26	142			-	-	51.5
42487	Lupus La protein homolog	142		3D	1owxA00	-	94.3
43629	50S ribosomal protein L23P	142			-	-	91.9
43609	Polyadenylate-binding protein, cytoplasmic and nuclear	142			-	-	89.5
43746	RNA-binding RRM/RBD/RNP motifs	141			-	-	88.0
41557	Putative RNA-binding protein 20	140			-	-	34.3
21672	Poly A	140			-	-	26.8
31549	Myelin expression factor 2	140			-	-	26.0
41453	Apoptotic chromatin condensation inducer 1	134			-	-	60.3
42348	Nucleolin, isoform CRA_c	132		3D	2fc8A00	-	64.2
16411	Peptidyl-prolyl cis-trans isomerase E	129	EC		-	-	57.4
7674	RNA-binding protein 48	125			-	-	69.6
2599	RNA-binding protein 27	125			-	-	65.6
42579	Polyadenylate-binding protein RBP45A	124			-	-	87.2
5180	A-kinase anchor protein 17A	122			-	-	71.7
6256	Whi4p	122			-	-	1.2
41535	RNA-binding protein with serine-rich domain 1	122			-	-	66.9
34267	YPL184C-like protein	121			-	-	59.1
22576	RNA recognition motif, putative	121			-	-	30.6
43511	60S ribosomal protein L41, mitochondrial	121			-	-	68.1
35334	RNA-binding protein 14	119			-	-	15.5
33717	cDNA FLJ53172, highly similar to Matrin-3	118			-	-	30.5
42729	DnaJ subfamily C member 17	118		3D	2d9oA00	-	75.9
41446	RNA-binding motif protein 5	118			-	-	67.8
43969	Putative RNA exonuclease NEF-sp	116			-	-	86.1
42055	RNA-binding protein 5	116		3D	2lkzA01	-	35.6
42105	Bruno-2, isoform E	115	EC		-	-	60.1
39649	Bruno-3 transcript variant 28	113			-	-	40.9
42938	Regulator of rDNA transcription protein 5	113			-	-	61.6
12406	RNA binding motif protein 12	112		3D	1welA00	-	34.1
42179	RNA-binding protein 12B	112			-	-	66.0
42803	Alkylated DNA repair protein alkB homolog 8	112	EC	3D	2cq2A01	-	75.3
35340	RNA binding motif protein 12	112		3D	2dnnA01	-	22.0
42887	AGL038Cp	111			-	-	88.7
41923	Synaptojanin-1 isoform 1	110	EC	3D	2dnrA00	-	58.5
20387	Serine/threonine-protein kinase Kist isoform 2	109	EC		-	-	21.5
43440	WGS project CCBQ000000000 data, contig 00102	108			-	-	77.2
19496	RNA-binding protein 45	107			-	-	76.0
43637	Single-strand telomeric DNA-binding protein GBP2	107		3D	2mzsA00	-	84.0
311	Couch potato, isoform P	107			-	-	22.4
43844	FOG-1 protein	107		3D	2m88A01	-	55.6
43348	Nucleolar protein 8, isoform CRA_a	107			-	-	89.2
43119	RNA-binding region-containing protein, putative	105			-	-	87.6
43456	Uncharacterized RNA-binding protein C1861.04c	103		3D	2ghpA02	-	67.5
18343	Protein PTI1	101			-	-	1.1
42223	TAR DNA-binding protein 43	101			-	-	45.1
36806	G-rich sequence factor 1	101		3D	4qu7A00	-	71.0
42126	Nucleolar protein 12	100			-	-	77.8
42440	La ribonucleoprotein domain family, member 7	98			-	-	73.8
152	Oncorhynchus mykiss genomic scaffold, scaffold_4855	97			-	-	7.8
29139	RNA-binding protein 14	96		3D	2dnpA01	-	32.2
42109	SRA stem-loop-interacting RNA-binding protein, mitochondrial	94			-	-	83.6
15631	CUGBP Elav-like family member 6	91			-	-	50.2
36050	YPL184C-like protein	91			-	-	0.0
41539	Probable RNA-binding protein 19	90			-	-	61.9
28580	Histone-lysine N-methyltransferase SETD1A	90	EC	3D	3s8sA00	-	16.0
4219	SART3 protein	90			-	-	57.9
6105	cDNA FLJ55637, highly similar to Matrin-3	90		3D	1x4fA00	-	32.9
43443	RNA-binding protein 28	89			-	-	65.3
17643	Regulator of rDNA transcription protein 5	88			-	-	9.7
43219	MKI67 FHA domain-interacting nucleolar phosphoprotein	88			-	-	83.1
505	Ubiquitin-like modifier-activating enzyme 1	88		3D	2lxiA00	-	63.0
41657	Protein alan shepard	88			-	-	53.7
1429	RNA-binding protein 10	87		3D	2m2bA00	-	31.6
42228	Putative RNA exonuclease NEF-sp	87			-	-	83.3
22765	Ribonucleoprotein PTB-binding 1	87		3D	3h2uB01	-	33.4
12770	Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1	85			-	-	21.3
43087	Speckle targeted PIP5K1A-regulated poly A	83	EC	3D	2e5gA01	-	69.6
43818	RNA-binding protein 44	83			-	-	76.0
1485	Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1	82			-	-	2.3
42668	RNA-binding protein 47C isoform 6	82			-	-	86.1
15649	Rnp1p	82			-	-	1.1
18158	Bruno-2, isoform A	82	EC		-	-	36.2
43874	Nonsense-mediated mRNA decay protein 3	81			-	-	92.8
43911	RNA-binding RRM/RBD/RNP motifs	81			-	-	87.5
37454	G-rich sequence factor 1	81		3D	2lmiA01	-	61.6
43095	RAD52 motif-containing protein 1	80			-	-	80.6
42779	Pre-mRNA-splicing factor CWC2	79		3D	3tp2A02	-	77.4
43606	Eukaryotic translation initiation factor 3 subunit B	78			-	-	54.9
41721	RNA-binding protein 12B	78			-	-	67.0
42743	Dead end homolog 1 Zebrafish	78			-	-	69.4
41413	RNA-binding protein 6	76			-	-	42.2
8798	Lhp1p	75			-	-	17.4
43068	CCR4-NOT transcription complex subunit 4	74			-	-	88.3
17566	RNA-binding protein 40	74			-	-	68.3
43463	Uncharacterized RNA-binding protein C1861.04c	74		3D	2go9A01	-	6.2
42123	Germinal-center associated nuclear protein	72			-	-	65.7
24044	U4/U6 snRNP-associated protein	72			-	-	1.4
43998	La ribonucleoprotein domain family, member 6	71			-	-	91.2
43597	mRNA export factor crp79	71			-	-	93.9
42821	Nucleolin, isoform CRA_c	70			-	-	75.6
8165	YHL034Cp-like protein	70			-	-	25.8
41458	EWS RNA-binding protein variant 6	69			-	-	36.0
108	RNA-binding protein 39 isoform c	69			-	-	17.6
42750	Multiple RNA-binding domain-containing protein 1	68			-	-	86.3
33865	Ribonucleoprotein PTB-binding 2	68			-	-	33.3
36131	RNA-binding protein 12	68		3D	2cpyA01	-	20.6
14069	RNA-binding protein 12B	68			-	-	28.7
43832	Pre-mRNA splicing factor Prp24	66			-	-	92.1
42325	Multiple RNA-binding domain-containing protein 1	66			-	-	82.9
37276	RNA-binding protein NAB6	65			-	-	11.1
16570	Heterogeneous nuclear ribonucleoprotein C	65			-	-	20.4
14878	Translation initiation factor eIF4B	65			-	-	10.6
41762	50S ribosomal protein L23	63			-	-	33.6
26702	Heterogeneous nuclear ribonucleoprotein A1	63			-	-	67.0
6073	Uncharacterized protein YHR127W	63			-	-	39.4
42919	Eukaryotic translation initiation factor 3 subunit B	63		3D	3ns5A00	-	50.3
12747	Nuclear localization sequence-binding protein	63			-	-	24.6
43733	Mitochondrial escape protein 2	61			-	-	74.0
4532	RNA-binding protein 45-like protein	61			-	-	48.7
32046	RNA-binding protein 45	61			-	-	43.5
21422	RNA-binding protein MIP6	59			-	-	23.6
26119	Putative uncharacterized protein	59			-	-	8.8
43819	Pes4p	58			-	-	38.5
42521	Nucleolin 1	58			-	-	86.6
13694	Diacylglycerol kinase theta	58	EC		-	-	19.3
42361	Serine/arginine-rich splicing factor RS41	58			-	-	71.6
41496	Heterogeneous nuclear ribonucleoprotein A0	57			-	-	58.7
43957	Histone-lysine N-methyltransferase, H3 lysine-4 specific	56	EC	3D	2j8aA01	-	11.2
10316	Protein PES4	56			-	-	18.0
5010	Hephaestus, isoform L	56			-	-	53.8
20641	RNA-binding protein 45	55			-	-	42.7
28045	Pes4p	55			-	-	2.5
43185	Methenyltetrahydrofolate synthase domain-containing protein	54		3D	2e5jA01	-	78.2
42425	Meiosis arrest female protein 1	54			-	-	27.6
14046	RNA-binding protein Musashi 1	54		3D	2rs2A00	-	59.2
6259	Poly A	53			-	-	10.5
28026	YGR250C-like protein	52			-	-	24.7
43558	Eukaryotic translation initiation factor 3 subunit B	52			-	-	90.8
13970	Arrest, isoform F	52			-	-	24.4
2738	Serrate RNA effector molecule homolog	51			-	-	77.6
796	Nuclear localization sequence-binding protein	51			-	-	3.9
27109	B52, isoform O	51			-	-	39.3
42438	Heterogeneous nuclear ribonucleoprotein A1	50			-	-	74.0
26004	Ribonucleoprotein, PTB-binding 1	50			-	-	17.1
25601	Uncharacterized protein	49			-	-	0.0
41580	RNA-binding protein 28	48			-	-	42.4
41717	TAR DNA-binding protein-43 homolog, isoform A	47			-	-	36.3
41426	RNA-binding protein 6	47			-	-	57.1
15973	Hrp1p	47			-	-	18.4
43501	CG4887, isoform A	45			-	-	89.0
15896	Splicing factor 3B subunit 4, putative	45			-	-	19.8
42396	No-on transient A-like protein	45			-	-	54.4
8454	RNA-binding protein MIP6	45			-	-	9.6
20002	Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1	45			-	-	51.3
42324	Meiosis arrest female protein 1	44			-	-	42.8
43641	Eukaryotic initiation factor 4B	43			-	-	83.3
1392	Splicing factor, putative	42			-	-	54.0
3338	Nop13p	42			-	-	13.3
43883	Tudor domain-containing protein 10	42			-	-	93.9
12359	CSC1-like protein 2	41			-	-	1.3
4232	Cus2p	40			-	-	22.5
43531	RNA recognition motif-containing protein	40			-	-	78.7
4358	Transcription initiation factor TFIID subunit 15b	39			-	-	55.8
13469	60S ribosome subunit biogenesis protein NOP8	39			-	-	4.8
17888	Split ends, isoform H	39			-	-	30.3
42077	Spargel, isoform D	39			-	-	72.7
11470	RNA binding protein, putative	38			-	-	33.0
5271	RNA-binding protein SGN1	38			-	-	16.2
14869	Nam8p	38			-	-	1.3
16212	Protein BM-ETR-1, isoform f	37			-	-	66.3
31527	Mud1p	37			-	-	11.9
24035	Splicing regulator RBM11	36			-	-	22.4
42049	CSC1-like protein 1	35			-	-	41.8
43577	Putative lupus la protein	34			-	-	80.8
42059	Ribosomal RNA-processing protein 7 homolog A	34			-	-	70.2
38774	At4g39880	34			-	-	58.4
29681	Boule, isoform F	33			-	-	1.3
16176	RNA annealing protein YRA1	33			-	-	0.0
42988	Multiple RNA-binding domain-containing protein	31			-	-	62.9
43314	Pre-rRNA-processing protein esf2	31			-	-	74.3
43108	Eukaryotic translation initiation factor 3B-2	31			-	-	46.7
2675	CG10948, isoform D	29			-	-	33.3
25825	Cus2p	29			-	-	8.3
36859	Poly [ADP-ribose] polymerase 10	29	EC	3D	2dhxA01	-	11.0
18199	Glycine-rich RNA-binding protein	29			-	-	12.2
25205	RNA-binding protein MIP6	29			-	-	0.0
41430	RNA-binding protein 40	28			-	-	22.4
43549	YPL043Wp-like protein	28			-	-	5.6
43857	Putative RNA-binding protein R05D3.8	28			-	-	82.3
43635	Eukaryotic translation initiation factor 3 subunit B	28			-	-	15.9
7499	Rna15p	28			-	-	20.2
7716	U1 small nuclear ribonucleoprotein A	28			-	-	12.2
29697	RNA-binding protein MIP6	27			-	-	0.0
2745	RNA binding motif protein 28	27			-	-	30.4
9813	Squid, isoform E	27			-	-	30.7
29662	Serine/arginine-rich splicing factor RS2Z33	27			-	-	22.8
10223	Smooth, isoform T	26			-	-	2.3
16470	50S ribosomal protein L23	25			-	-	0.0
364	Embryonic lethal abnormal vision protein	25			-	-	56.5
24085	Polypyrimidine tract-binding protein 3	25			-	-	25.6
10760	Putative uncharacterized protein At5g54580	22			-	-	51.2
43532	Uncharacterized RNA-binding protein C4F6.14	22			-	-	83.9
9096	YPL043Wp-like protein	22			-	-	27.8
6636	Scaffold attachment factor B, isoform A	21			-	-	49.6
42125	Ribonucleoprotein PTB-binding 2	21			-	-	22.8
27639	Strain CBS138 chromosome M complete sequence	21			-	-	26.0
22973	Multiple RNA-binding domain-containing protein 1	21			-	-	25.5
36240	RNA recognition motif-containing protein	21			-	-	24.6
43320	Serine/arginine-rich splicing factor SR45a	20			-	-	79.8
20913	MAN1, isoform A	20			-	-	47.0
28020	Heterogeneous nuclear ribonucleoprotein 27C	20			-	-	3.4
43866	GE12598	20			-	-	73.4
9878	Zinc finger protein 638	20			-	-	13.2
334	Nuclear polyadenylated RNA-binding protein 3	19			-	-	1.3
43712	U1 snRNP-associated protein usp107	19			-	-	69.3
43757	Dead end protein homolog 1	19			-	-	26.8
12889	Multiple RNA-binding domain-containing protein 1	19			-	-	8.0
13054	Heterogeneous nuclear ribonucleoprotein 27C	19			-	-	3.1
6426	Smooth, isoform L	19			-	-	12.4
41629	Eukaryotic translation initiation factor 3 subunit B	18			-	-	18.8
43850	RNA-binding protein 43	18			-	-	61.8
37768	GH15941	18			-	-	29.7
26065	Ribonuclear protein at 97D, isoform C	18			-	-	12.2
41957	RNA recognition motif-containing protein	18			-	-	50.5
9890	Negative elongation factor E	18			-	-	18.0
43528	Glycine-rich RNA-binding protein RZ1C	17			-	-	64.7
41963	Myelin expression factor 2	17			-	-	27.7
22433	Peptidyl-prolyl cis-trans isomerase E	17	EC		-	-	22.2
43125	Cabeza, isoform D	16			-	-	48.0
18332	Poly U	16			-	-	12.9
42909	Small RNA degrading nuclease 3	16			-	-	49.5
35865	GH11495p	15			-	-	24.7
26371	Rox8, isoform B	15			-	-	18.6
10394	Nucleolin 2	15			-	-	26.3
43817	Protein terminal ear1 homolog	15			-	-	65.8
15303	RNA recognition motif-containing protein	15			-	-	65.8
11744	Zinc finger protein 638	14			-	-	13.5
33762	Similar to Drosophila melanogaster CG1316	14			-	-	10.7
8084	Putative heterogeneous nuclear ribonucleoprotein	14			-	-	61.1
7204	A-kinase anchor protein 17B	14			-	-	36.4
15082	RNA recognition motif-containing protein	14			-	-	51.6
38965	Cytoplasmic polyadenylation element-binding protein 3	13			-	-	26.0
41475	U2-associated protein SR140	13			-	-	54.4
42959	Putative RNA-binding protein 15B	13			-	-	39.3
11224	Eukaryotic translation initiation factor 3 subunit G	13			-	-	8.6
16148	Glycine-rich RNA-binding protein 5, mitochondrial	12			-	-	8.1
453	Putative second mitotic wave missing	12			-	-	13.6
28767	CG7879, isoform A	12			-	-	9.1
29101	GM23745	12			-	-	7.7
19557	SPOC domain protein	12			-	-	8.5
42840	Signal peptidase complex subunit	11			-	-	58.3
14579	RNA recognition motif-containing protein	11			-	-	22.3
31152	NONO-1, isoform d	10		3D	5ca5A02	-	7.4
16759	RNA-binding protein BRN1	10			-	-	21.1
21018	GK13947	10			-	-	36.3
29658	Putative uncharacterized protein AT4g20030	10			-	-	49.4
16009	Serine/arginine-rich SC35-like splicing factor SCL33	10			-	-	40.0
28042	Deleted in azoospermia-like	10			-	-	12.7
43072	DNA-damage-repair/toleration protein DRT111, chloroplastic	10			-	-	4.3
43203	Cytoplasmic polyadenylation element-binding protein 3	10			-	-	15.1
42735	RNP domain protein AFU_orthologue AFUA_6G12300	9			-	-	67.0
12929	GM11822	9			-	-	9.6
22336	U2 small nuclear ribonucleoprotein, putative	9			-	-	11.8
15597	RNA recognition motif-containing protein	9			-	-	19.5
15088	Ribonuclear protein at 97D, isoform F	9			-	-	0.0
34275	Protein terminal ear1 homolog	9			-	-	0.0
23936	Squid, isoform E	9			-	-	29.8
42737	39S ribosomal protein L23, mitochondrial	9			-	-	12.9
27564	Neosin, isoform A	9			-	-	23.9
25810	Uncharacterized protein	9			-	-	0.0
9688	Serine/arginine-rich SC35-like splicing factor SCL30	8			-	-	25.5
39680	CG1316	8			-	-	20.5
12204	CG1316	8			-	-	21.2
4947	RNA-binding protein 33	8			-	-	5.9
43543	Cytoplasmic polyadenylation element-binding protein 1	8			-	-	40.5
8294	Heterogeneous nuclear ribonucleoprotein A1	8			-	-	29.3
32163	DNA-binding protein modulo	8			-	-	30.8
43143	SUP-26, isoform r	8			-	-	10.9
17491	Painting of fourth, isoform C	8			-	-	15.3
25424	RNA recognition motif-containing protein	7			-	-	9.3
32658	GI14443	7			-	-	17.1
13789	CG17187	7			-	-	28.8
17085	RNA-binding protein BRN1	7			-	-	6.5
15871	PIP-1	7			-	-	29.6
34878	Polypyrimidine tract-binding protein 3	7			-	-	7.7
13756	GM13065p	7			-	-	34.4
4448	CUGBP Elav-like family member 4	6			-	-	63.4
41572	Heterogeneous nuclear ribonucleoprotein L-like	6			-	-	1.7
37183	RNA-binding protein rnp-1	6			-	-	8.9
29839	Polyadenylate-binding protein RBP47B'	6			-	-	9.6
43982	RNA-dependent RNA polymerase 1	6	EC		-	-	71.7
1211	Multiple RNA-binding domain-containing protein 1	6			-	-	17.6
1720	Musashi, isoform E	6			-	-	12.3
28014	Probable splicing factor, arginine/serine-rich 1	6			-	-	22.2
9716	Uncharacterized protein	6			-	-	0.0
12010	Putative RNA-binding protein 15B	6			-	-	19.1
32889	DNA-binding protein modulo	6			-	-	17.7
42915	Nucleotide/nucleic acid binding protein	6			-	-	44.6
447	SD14970p	6			-	-	18.5
585	Nucleolin	6			-	-	0.0
43353	Polynucleotide adenylyltransferase domain and RNA recognition motif-containing protein	6			-	-	41.1
43626	Polyadenylate-binding protein, cytoplasmic and nuclear	6			-	-	68.0
25818	Spliceosome-associated protein, putative	5			-	-	0.0
17535	RNA-binding protein 4	5			-	-	26.3
20607	RNA-binding protein Seb1	5			-	-	14.6
21936	Peptidyl-prolyl cis-trans isomerase E	5	EC		-	-	9.2
43451	Putative RNA-binding protein	5			-	-	70.6
31288	Polyadenylate-binding protein 1	5			-	-	25.2
5786	CG4806	5			-	-	16.8
15003	CG11454	5			-	-	26.6
31201	UBP1-associated protein 2C	5			-	-	5.9
4876	CG3335	5			-	-	20.0
42222	Maternal effect lethal protein 47	5			-	-	41.5
42428	La-related protein 7	5			-	-	20.6
37722	Eukaryotic translation initiation factor 3 subunit B	5			-	-	12.7
3140	Small RNA degrading nuclease 3	5			-	-	0.0
28956	RNA-binding protein 4	5			-	-	17.6
906	RNA-binding protein 39	5			-	-	21.2
28976	CG7903, isoform B	5			-	-	1.6
29688	RNA-binding protein lark	5			-	-	0.0
11385	GG15393	5			-	-	9.2
14059	Multiple RNA-binding domain-containing protein 1	5			-	-	3.3
15653	Probable RNA-binding protein CG14230	5			-	-	16.3
12887	Multiple RNA-binding domain-containing protein 1	5			-	-	14.9
43495	Uncharacterized RNA-binding protein C365.04c	5			-	-	76.9
25181	Probable splicing factor, arginine/serine-rich 6	5			-	-	11.3
11433	RBD-1, isoform a	5			-	-	16.5
38206	Probable splicing factor ECU05_1440	5			-	-	12.9
3388	LD25519p	5			-	-	19.0
10734	Zinc finger protein 638	5			-	-	0.0
7014	Glycine-rich RNA-binding protein 3, mitochondrial	5			-	-	1.8
20283	PTB-1, isoform a	4			-	-	21.5
38527	Polynucleotide adenylyltransferase domain and RNA recognition motif-containing protein	4			-	-	26.7
2325	Exu-associated protein	4			-	-	10.3
806	Protein embryo defective 140	4			-	-	9.4
43994	U1 snRNP-associated protein Usp109	4			-	-	67.0
19508	Pre rRNA processing protein Mrd1	4			-	-	0.0
13651	Actin cytoskeleton protein	4			-	-	0.0
42980	Regulator of rDNA transcription protein 5	4			-	-	49.1
6917	RNA binding RRM/RBD/RNP motifs	4			-	-	0.0
4473	RNA recognition motif-containing protein	4			-	-	13.1
8170	Serine/arginine-rich SC35-like splicing factor SCL28	4			-	-	0.0
17556	50S ribosomal protein L23	4			-	-	0.0
9530	TDP-1, isoform c	4			-	-	7.9
32648	Protein terminal ear1	4			-	-	17.3
30586	33 kDa ribonucleoprotein, chloroplastic	4			-	-	15.2
222	FI03862p	4			-	-	14.0
11854	Polyadenylate-binding protein, cytoplasmic and nuclear	4			-	-	26.7
28889	Probable splicing factor, arginine/serine-rich 7	4			-	-	13.4
23	Multiple RNA-binding domain-containing protein 1	4			-	-	0.0
17241	RNA binding protein, putative	4			-	-	0.0
32098	Flowering time control protein FPA	4			-	-	7.1
35527	Putative uncharacterized protein At1g70200	4			-	-	20.7
42972	Pre-mRNA-splicing factor cwf5	4			-	-	0.0
12838	IGF-II mRNA-binding protein, isoform L	4			-	-	16.6
9180	RNA recognition motif RRM	4			-	-	3.8
43859	DIN-1, isoform a	3			-	-	39.6
16472	Protein MEI2-like 3	3			-	-	0.0
43722	Putative pre-rRNA-processing protein esf2	3			-	-	35.4
29919	Probable splicing factor, arginine/serine-rich 2	3			-	-	8.4
13011	Nucleotide/nucleic acid binding protein	3			-	-	11.2
31466	RNA-binding RRM/RBD/RNP motifs	3			-	-	8.1
14190	CG14506, isoform B	3			-	-	7.1
39192	FOG-1, isoform a	3			-	-	3.2
8796	Pentatricopeptide repeat-containing protein At5g04810, chloroplastic	3			-	-	7.6
28878	Flowering time control protein FPA	3			-	-	4.4
25180	Probable splicing factor, arginine/serine-rich 5	3			-	-	0.0
6887	Mec-8 protein	3			-	-	8.4
28902	Heterogeneous nuclear ribonucleoprotein 1	3			-	-	11.5
7353	La-related protein 6A	3			-	-	0.0
43691	Putative uncharacterized protein At1g14340	3			-	-	45.0
32901	Probable 39S ribosomal protein L23, mitochondrial	3			-	-	17.3
36160	Protein MEI2-like 1	3			-	-	9.4
6036	GG23320	3			-	-
5722	Multiple RNA-binding domain-containing protein 1	3			-	-	9.1
9288	RBD-1, isoform a	3			-	-	20.8
20051	GF19208	3			-	-	22.8
10740	Cell wall integrity protein scw1	3			-	-	12.9
9299	RNP-8, isoform a	3			-	-	18.2
25301	Nuclear export factor-a isoform 2	3			-	-	11.8
7890	RNA-binding protein 48	3			-	-	2.3
33206	tRNA methyltransferase 9	3			-	-	8.8
16598	Putative uncharacterized protein At2g44720	3			-	-	6.6
7891	Multiple RNA-binding domain-containing protein 1	2			-	-	18.8
25712	SMG-4, isoform b	2			-	-	0.0
43974	Putative RNA exonuclease NEF-sp	2			-	-	45.2
42288	Regulator of rDNA transcription protein 5	2			-	-	38.4
30629	Protein xmas-2	2			-	-	8.0
43841	La protein homolog	2			-	-	45.0
15358	Putative uncharacterized protein	2			-	-	0.0
42856	Putative uncharacterized protein F12E4_250	2			-	-	0.0
6767	La protein homolog	2			-	-	5.3
37783	Polypyrimidine tract-binding protein 1	2			-	-	10.3
18636	Putative chloroplast RNA binding protein	2			-	-	10.5
29019	RNA recognition motif-containing protein	2			-	-	3.0
28449	Uncharacterized protein	2			-	-	4.4
3958	Phragmoplastin interacting protein 1	2			-	-	15.5
18733	Putative uncharacterized protein At5g58130	2			-	-	2.7
43494	Putative RNA binding protein RNP	2			-	-	38.0
18518	RNA and export factor binding protein 2	2			-	-	2.4
27073	Polyadenylate-binding protein 3	2			-	-	11.7
5306	CG7879, isoform A	2			-	-	9.8
43349	Sart3 protein	2			-	-	0.0
27129	Speckle targeted PIP5K1A-regulated poly A	2	EC		-	-	0.0
1486	HIV Tat-specific factor 1	2			-	-	0.0
21898	La protein 2	2			-	-	0.0
20984	Phragmoplastin interacting protein 1	2			-	-	4.3
7604	RNA recognition motif-containing protein	2			-	-	14.5
43479	Meiotically up-regulated gene 28 protein	2			-	-	43.0
41584	Ewing sarcoma breakpoint region 1b	2			-	-	0.0
31465	Putative uncharacterized protein At2g44720	2			-	-	4.3
31413	RNA recognition motif-containing protein	2			-	-	2.5
36857	Nuclear RNA export factor 1	2			-	-	0.0
43410	mRNA export factor crp79	2			-	-	42.5
25515	Peptidyl-prolyl cis-trans isomerase E	2	EC		-	-	1.2
34260	Epithelial-splicing regulatory protein 2	2			-	-	0.0
37583	GM18998	2			-	-	11.9
32880	Flowering time control protein FPA	2			-	-	0.0
1857	Rbm19 protein	2			-	-	12.3
43547	Eukaryotic translation initiation factor 3 subunit B	2			-	-	6.3
7997	CG7879, isoform A	2			-	-	4.5
35790	Probable splicing factor, arginine/serine-rich 7	2			-	-	0.0
43487	Pumilio domain-containing protein P35G2.14	2			-	-	42.1
10423	Putative chloroplast RNA binding protein	2			-	-	5.9
39016	DIN-1, isoform b	2			-	-	0.0
10313	DAZ protein 1	2			-	-	0.0
2193	Sart3 protein	2			-	-	0.0
40979	Glycine-rich RNA-binding protein 3	1			-	-	0.0
29424	RNA-binding protein 1	1			-	-	0.0
38783	mRNA-binding protein PUF2	1			-	-
41425	Squamous cell carcinoma antigen recognized by T-cells 3	1			-	-
17177	Uncharacterized protein	1			-	-	0.0
35059	RNA-binding region RNP-1 domain-containing protein	1			-	-	0.0
8400	Nucleic acid binding protein, putative	1			-	-	0.0
38963	Hrp65 protein	1			-	-	0.0
2304	YGR250C-like protein	1			-	-	0.0
4084	Peptidyl-prolyl cis-trans isomerase E	1	EC		-	-	0.0
42897	Multiple RNA-binding domain-containing protein 1	1			-	-	0.0
7313	Splicing factor U2AF-associated protein 2	1			-	-	0.0
2233	Uncharacterized protein	1			-	-	0.0
43431	Regulator of rDNA transcription protein 5	1			-	-	0.0
817	Oo18 RNA-binding protein, isoform B	1			-	-
42926	CG11417	1			-	-	0.0
23121	Putative RNA binding protein RNP	1			-	-	0.0
9491	Polyadenylate-binding protein 1-B	1			-	-	0.0
37218	Conserved Plasmodium protein	1			-	-	0.0
24613	Polypyrimidine tract binding protein, putative	1			-	-	0.0
36743	Alkylated DNA repair protein alkB homolog 8	1			-	-	0.0
10307	mRNA export protein mlo3	1			-	-	0.0
33620	Uncharacterized RNA-binding protein C428.12c	1			-	-	0.0
43318	Nuclear transport factor 2 and RNA recognition motif domain-containing protein	1			-	-	0.0
12447	Mxc	1			-	-	0.0
15645	Uncharacterized protein At1g27050	1			-	-	0.0
41105	Putative uncharacterized protein F8J2_150	1			-	-	0.0
25192	Uncharacterized RNA-binding protein C902.04	1			-	-	0.0
2347	RNA-binding region RNP-1 domain-containing protein	1			-	-	0.0
5158	Hrp65 protein	1			-	-	0.0
34271	Pre-mRNA-splicing factor srp2	1			-	-	0.0
18359	Dead end protein homolog 1	1			-	-	0.0
41333	Rbp2 protein	1			-	-	0.0
36162	U1 snRNP-associated protein usp109	1			-	-	0.0
41324	Rbp4 protein	1			-	-	0.0
11450	Polypyrimidine tract binding protein, putative	1			-	-	0.0
21774	Uncharacterized RNA-binding protein C1861.04c	1			-	-	0.0
8471	Rbm19 protein	1			-	-	0.0
13652	Uncharacterized protein	1			-	-	0.0
14036	DRR-2	1			-	-	0.0
27278	Uncharacterized protein	1			-	-	0.0
22965	mRNA export factor crp79	1			-	-	0.0
8570	NONO-1, isoform a	1			-	-	0.0
9171	GM16461	1			-	-	0.0
22513	Putative glycine-rich RNA binding protein	1			-	-	0.0
1967	RNA-binding protein rnp24	1			-	-	0.0
3181	La-related protein 7 isoform 2	1			-	-	0.0
40815	CG14414, isoform C	1			-	-	0.0
41410	Rbp12 protein	1			-	-	0.0
3860	Putative RNA-binding protein	1			-	-	0.0
942	RNA-binding protein 10	1			-	-
20649	Splicing factor U2AF 59 kDa subunit	1			-	-	0.0
40711	RNA-binding region RNP-1 domain-containing protein	1			-	-	0.0