PDB Information

PDB4YHH
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Structural characterization of an alternative mode of tigecycline binding to the bacterial ribosome.
Schedlbauer, A., Kaminishi, T., Ochoa-Lizarralde, B., Dhimole, N., Zhou, S., Lopez-Alonso, J.P., Connell, S.R., Fucini, P.
Antimicrob.Agents Chemother.
HeaderRibosome
Released2015-02-27
Resolution3.420
CATH Insert Date28 Jun, 2015

PDB Images (47)

PDB Prints

PDB Chains (21)

Chain ID Date inserted into CATH CATH Status
A 29 Jun, 2015 Rejected
B 29 Jun, 2015 Chopped
C 29 Jun, 2015 Chopped
D 29 Jun, 2015 Chopped
E 29 Jun, 2015 Chopped
F 29 Jun, 2015 Chopped
G 29 Jun, 2015 Chopped
H 29 Jun, 2015 Chopped
I 29 Jun, 2015 Chopped
J 29 Jun, 2015 Chopped
K 29 Jun, 2015 Chopped
L 29 Jun, 2015 Chopped
M 29 Jun, 2015 Chopped
N 29 Jun, 2015 Chopped
O 29 Jun, 2015 Chopped
P 29 Jun, 2015 Chopped
Q 29 Jun, 2015 Chopped
R 29 Jun, 2015 Chopped
S 29 Jun, 2015 Chopped
T 29 Jun, 2015 Chopped
V 29 Jun, 2015 Rejected

CATH Domains (25)

Domain ID Date inserted into CATH Superfamily CATH Status
4yhhB01 22 Jul, 2015 3.40.50.10490 Assigned
4yhhB02 22 Jul, 2015 1.10.287.610 Assigned
4yhhC01 22 Jul, 2015 3.30.300.20 Assigned
4yhhC02 22 Jul, 2015 3.30.1140.32 Assigned
4yhhD01 22 Jul, 2015 1.10.1050.10 Assigned
4yhhD02 22 Jul, 2015 3.10.290.10 Assigned
4yhhE01 22 Jul, 2015 3.30.160.20 Assigned
4yhhE02 22 Jul, 2015 3.30.230.10 Assigned
4yhhF00 22 Jul, 2015 3.30.70.60 Assigned
4yhhG00 22 Jul, 2015 1.10.455.10 Assigned
4yhhH01 22 Jul, 2015 3.30.1370.30 Assigned
4yhhH02 22 Jul, 2015 3.30.1490.10 Assigned
4yhhI00 22 Jul, 2015 3.30.230.10 Assigned
4yhhJ00 22 Jul, 2015 3.30.70.600 Assigned
4yhhK00 22 Jul, 2015 3.30.420.80 Assigned
4yhhL00 22 Jul, 2015 2.40.50.140 Assigned
4yhhM01 22 Jul, 2015 1.10.8.50 Assigned
4yhhM02 22 Jul, 2015 4.10.910.10 Assigned
4yhhN00 22 Jul, 2015 4.10.830.10 Assigned
4yhhO00 22 Jul, 2015 1.10.287.10 Assigned
4yhhP00 22 Jul, 2015 3.30.1320.10 Assigned
4yhhQ00 22 Jul, 2015 2.40.50.140 Assigned
4yhhR00 22 Jul, 2015 4.10.640.10 Assigned
4yhhS00 22 Jul, 2015 3.30.860.10 Assigned
4yhhT00 22 Jul, 2015 1.20.58.110 Assigned

UniProtKB Entries (17)

Accession Gene ID Taxon Description
P80372 RS3_THET8 Thermus thermophilus HB8 30S ribosomal protein S3
P80376 RS11_THET8 Thermus thermophilus HB8 30S ribosomal protein S11
Q5SHQ5 RS5_THET8 Thermus thermophilus HB8 30S ribosomal protein S5
P17291 RS7_THET8 Thermus thermophilus HB8 30S ribosomal protein S7
P80377 RS13_THET8 Thermus thermophilus HB8 30S ribosomal protein S13
Q5SHP2 RS19_THET8 Thermus thermophilus HB8 30S ribosomal protein S19
Q5SHN3 RS12_THET8 Thermus thermophilus HB8 30S ribosomal protein S12
Q5SJH3 RS16_THET8 Thermus thermophilus HB8 30S ribosomal protein S16
P80371 RS2_THET8 Thermus thermophilus HB8 30S ribosomal protein S2
Q5SLQ0 RS18_THET8 Thermus thermophilus HB8 30S ribosomal protein S18
Q5SLP8 RS6_THET8 Thermus thermophilus HB8 30S ribosomal protein S6
P80380 RS20_THET8 Thermus thermophilus HB8 30S ribosomal protein S20
P80373 RS4_THET8 Thermus thermophilus HB8 30S ribosomal protein S4
P80374 RS9_THET8 Thermus thermophilus HB8 30S ribosomal protein S9
A0A0N0BLS5 RS17_THEAQ Thermus aquaticus 30S ribosomal protein S17
Q5SHN7 RS10_THET8 Thermus thermophilus HB8 30S ribosomal protein S10
A0A0N0BLP2 RS14Z_THEAQ Thermus aquaticus 30S ribosomal protein S14 type Z