The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 2: Transcription termination/antitermination protein ...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Bacterial-type RNA polymerase core enzyme binding GO:0001000
Interacting selectively and non-covalently with the bacterial-type RNA polymerase core enzyme, typically consisting of two alpha, one beta, one beta prime, and one omega subunit.
|
113 |
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
(103 more) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
113 |
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
(103 more) |
|
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
113 |
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
P0AFF6 (/IPI)
(103 more) |
|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
10 | P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) |
There are 4 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Transcription termination from bacterial-type RNA polymerase promoter GO:0001125
The process in which the synthesis of an RNA molecule by a bacterial-type RNA polymerase using a DNA template is completed.
|
113 |
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
(103 more) |
|
Transcription antitermination GO:0031564
Regulation of transcription by a mechanism that allows RNA polymerase to continue transcription beyond termination site(s).
|
113 |
P0AFF6 (/IMP)
P0AFF6 (/IMP)
P0AFF6 (/IMP)
P0AFF6 (/IMP)
P0AFF6 (/IMP)
P0AFF6 (/IMP)
P0AFF6 (/IMP)
P0AFF6 (/IMP)
P0AFF6 (/IMP)
P0AFF6 (/IMP)
(103 more) |
|
DNA-templated transcription, termination GO:0006353
The cellular process that completes DNA-templated transcription; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.
|
53 |
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
A0A1J9VGC8 (/ISS)
(43 more) |
|
Transcription antitermination GO:0031564
Regulation of transcription by a mechanism that allows RNA polymerase to continue transcription beyond termination site(s).
|
10 | P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) P9WIV3 (/IDA) |
There are 3 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
116 |
O51740 (/IDA)
O51740 (/IDA)
O51740 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
P0AFF6 (/IDA)
(106 more) |
|
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
10 | P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) |
|
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
10 | P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) P9WIV3 (/HDA) |