The name of this superfamily has been modified since the most recent official CATH+ release (v4_2_0). At the point of the last release, this superfamily was named:
"SET domain
".
FunFam 5100: Putative histone-lysine n-methyltransferase ehmt2
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 53 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
17 |
A0A0G2JTA5 (/IPI)
A0A0G2JZM5 (/IPI)
A0A0G2K8H1 (/IPI)
A2ABF9 (/IPI)
O22781 (/IPI)
O43463 (/IPI)
O54864 (/IPI)
O60016 (/IPI)
Q32KD2 (/IPI)
Q5DW34 (/IPI)
(7 more) |
|
Histone-lysine N-methyltransferase activity GO:0018024
Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.
|
9 | M9PGH7 (/IDA) O43463 (/IDA) O54864 (/IDA) Q95RU8 (/IDA) Q96KQ7 (/IDA) Q9EQQ0 (/IDA) Q9H9B1 (/IDA) Q9V3K8 (/IDA) Q9Z148 (/IDA) |
|
Histone methyltransferase activity (H3-K9 specific) GO:0046974
Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 9) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 9). This reaction is the addition of a methyl group onto lysine at position 9 of the histone H3 protein.
|
9 | O43463 (/IDA) O54864 (/IDA) O60016 (/IDA) P45975 (/IDA) Q32KD2 (/IDA) Q5DW34 (/IDA) Q8GZB6 (/IDA) Q9H5I1 (/IDA) Q9Z148 (/IDA) |
|
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
|
6 | O43463 (/ISS) Q2NL30 (/ISS) Q32PH7 (/ISS) Q4R3E0 (/ISS) Q5RB81 (/ISS) Q9H5I1 (/ISS) |
|
Methyltransferase activity GO:0008168
Catalysis of the transfer of a methyl group to an acceptor molecule.
|
5 | O54864 (/IDA) O60016 (/IDA) Q8VZ17 (/IDA) Q9EQQ0 (/IDA) Q9H9B1 (/IDA) |
|
Histone methyltransferase activity GO:0042054
Catalysis of the reaction: S-adenosyl-L-methionine + histone = S-adenosyl-L-homocysteine + methyl-histone. Histone methylation generally occurs on either an arginine or lysine residue.
|
5 | O22781 (/ISS) O82175 (/ISS) Q294B9 (/ISS) Q9C5P0 (/ISS) Q9C5P4 (/ISS) |
|
Histone methyltransferase activity (H3-K9 specific) GO:0046974
Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 9) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 9). This reaction is the addition of a methyl group onto lysine at position 9 of the histone H3 protein.
|
5 | Q2NL30 (/ISS) Q5RB81 (/ISS) Q96KQ7 (/ISS) Q9EQQ0 (/ISS) Q9H9B1 (/ISS) |
|
Histone methyltransferase activity (H3-K9 specific) GO:0046974
Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 9) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 9). This reaction is the addition of a methyl group onto lysine at position 9 of the histone H3 protein.
|
4 | Q06ZW3 (/IMP) Q32KD2 (/IMP) Q5DW34 (/IMP) Q9Z148 (/IMP) |
|
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
3 | O54864 (/IDA) Q9EQQ0 (/IDA) Q9Z148 (/IDA) |
|
Histone-lysine N-methyltransferase activity GO:0018024
Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.
|
3 | Q32KD2 (/IMP) Q96KQ7 (/IMP) Q9Z148 (/IMP) |
|
Histone-lysine N-methyltransferase activity GO:0018024
Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.
|
3 | O54864 (/ISO) Q5DW34 (/ISO) Q9Z148 (/ISO) |
|
Histone methyltransferase activity GO:0042054
Catalysis of the reaction: S-adenosyl-L-methionine + histone = S-adenosyl-L-homocysteine + methyl-histone. Histone methylation generally occurs on either an arginine or lysine residue.
|
3 | O43463 (/IDA) O82175 (/IDA) P45975 (/IDA) |
|
C2H2 zinc finger domain binding GO:0070742
Interacting selectively and non-covalently with a C2H2-type zinc finger domain of a protein. The C2H2 zinc finger is the classical zinc finger domain, in which two conserved cysteines and histidines co-ordinate a zinc ion.
|
3 | Q5DW34 (/IPI) Q96KQ7 (/IPI) Q9Z148 (/IPI) |
|
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
|
2 | O54864 (/IDA) Q9EQQ0 (/IDA) |
|
P53 binding GO:0002039
Interacting selectively and non-covalently with one of the p53 family of proteins.
|
2 | Q96KQ7 (/IPI) Q9H9B1 (/IPI) |
|
P53 binding GO:0002039
Interacting selectively and non-covalently with one of the p53 family of proteins.
|
2 | Q5DW34 (/ISO) Q9Z148 (/ISO) |
|
Methyl-CpG binding GO:0008327
Interacting selectively and non-covalently with a methylated cytosine/guanine dinucleotide.
|
2 | Q8GZB6 (/IDA) Q8VZ17 (/IDA) |
|
Double-stranded methylated DNA binding GO:0010385
Interacting selectively and non-covalently with double-stranded methylated DNA. Methylation of cytosine or adenine in DNA is an important mechanism for establishing stable heritable epigenetic marks.
|
2 | Q32KD2 (/IDA) Q8GZB6 (/IDA) |
|
Methyl-CpNpG binding GO:0010428
Interacting selectively and non-covalently with a methylated cytosine/unspecified/guanine trinucleotide.
|
2 | Q8GZB6 (/IDA) Q8VZ17 (/IDA) |
|
Methyl-CpNpN binding GO:0010429
Interacting selectively and non-covalently with a methylated cytosine/unspecified/unspecified trinucleotide.
|
2 | Q8GZB6 (/IDA) Q8VZ17 (/IDA) |
|
Protein-lysine N-methyltransferase activity GO:0016279
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue in a protein substrate.
|
2 | Q96KQ7 (/IDA) Q9H9B1 (/IDA) |
|
Protein-lysine N-methyltransferase activity GO:0016279
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue in a protein substrate.
|
2 | Q5DW34 (/ISO) Q9Z148 (/ISO) |
|
Histone-lysine N-methyltransferase activity GO:0018024
Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.
|
2 | O54864 (/IGI) Q9EQQ0 (/IGI) |
|
Histone-lysine N-methyltransferase activity GO:0018024
Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.
|
2 | Q28Z18 (/ISS) Q8BHB2 (/ISS) |
|
Histone-lysine N-methyltransferase activity GO:0018024
Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.
|
2 | O43463 (/TAS) Q9H5I1 (/TAS) |
|
Histone methyltransferase activity (H3-K9 specific) GO:0046974
Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 9) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 9). This reaction is the addition of a methyl group onto lysine at position 9 of the histone H3 protein.
|
2 | O43463 (/EXP) Q9Z148 (/EXP) |
|
Histone methyltransferase activity (H3-K9 specific) GO:0046974
Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 9) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 9). This reaction is the addition of a methyl group onto lysine at position 9 of the histone H3 protein.
|
2 | O54864 (/ISO) Q9EQQ0 (/ISO) |
|
Histone methyltransferase activity (H3-K27 specific) GO:0046976
Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 27) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 27). This reaction is the addition of a methyl group onto lysine at position 27 of the histone H3 protein.
|
2 | Q5DW34 (/IDA) Q9Z148 (/IDA) |
|
Histone methyltransferase activity (H3-K27 specific) GO:0046976
Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 27) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 27). This reaction is the addition of a methyl group onto lysine at position 27 of the histone H3 protein.
|
2 | Q96KQ7 (/ISS) Q9H9B1 (/ISS) |
|
Promoter-specific chromatin binding GO:1990841
Interacting selectively and non-covalently with a section of chromatin that is associated with gene promoter sequences of DNA.
|
2 | Q96KQ7 (/IDA) Q9Z148 (/IDA) |
|
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
1 | Q9EQQ0 (/IDA) |
|
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
1 | O43463 (/TAS) |
|
Double-stranded DNA binding GO:0003690
Interacting selectively and non-covalently with double-stranded DNA.
|
1 | O60016 (/IDA) |
|
Single-stranded DNA binding GO:0003697
Interacting selectively and non-covalently with single-stranded DNA.
|
1 | O60016 (/IDA) |
|
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
|
1 | O60016 (/IDA) |
|
Methyltransferase activity GO:0008168
Catalysis of the transfer of a methyl group to an acceptor molecule.
|
1 | Q5DW34 (/ISO) |
|
Methyltransferase activity GO:0008168
Catalysis of the transfer of a methyl group to an acceptor molecule.
|
1 | Q8BHB2 (/ISS) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | Q9H5I1 (/IDA) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | Q9EQQ0 (/ISO) |
|
Protein methyltransferase activity GO:0008276
Catalysis of the transfer of a methyl group (CH3-) to a protein.
|
1 | Q9EQQ0 (/IDA) |
|
Protein methyltransferase activity GO:0008276
Catalysis of the transfer of a methyl group (CH3-) to a protein.
|
1 | O54864 (/TAS) |
|
S-adenosylmethionine-dependent methyltransferase activity GO:0008757
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
|
1 | O43463 (/IDA) |
|
S-adenosylmethionine-dependent methyltransferase activity GO:0008757
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
|
1 | O54864 (/ISO) |
|
Methylated histone binding GO:0035064
Interacting selectively and non-covalently with a histone protein in which a residue has been modified by methylation. Histones are any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes.
|
1 | O60016 (/IDA) |
|
Histone methyltransferase activity GO:0042054
Catalysis of the reaction: S-adenosyl-L-methionine + histone = S-adenosyl-L-homocysteine + methyl-histone. Histone methylation generally occurs on either an arginine or lysine residue.
|
1 | O54864 (/ISO) |
|
Histone methyltransferase activity GO:0042054
Catalysis of the reaction: S-adenosyl-L-methionine + histone = S-adenosyl-L-homocysteine + methyl-histone. Histone methylation generally occurs on either an arginine or lysine residue.
|
1 | P45975 (/NAS) |
|
Histone methyltransferase activity (H3-K9 specific) GO:0046974
Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 9) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 9). This reaction is the addition of a methyl group onto lysine at position 9 of the histone H3 protein.
|
1 | P45975 (/TAS) |
|
Protein N-terminus binding GO:0047485
Interacting selectively and non-covalently with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
|
1 | O43463 (/IPI) |
|
Protein N-terminus binding GO:0047485
Interacting selectively and non-covalently with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
|
1 | O54864 (/ISO) |
|
C2H2 zinc finger domain binding GO:0070742
Interacting selectively and non-covalently with a C2H2-type zinc finger domain of a protein. The C2H2 zinc finger is the classical zinc finger domain, in which two conserved cysteines and histidines co-ordinate a zinc ion.
|
1 | Q9Z148 (/ISO) |
|
S-adenosyl-L-methionine binding GO:1904047
Interacting selectively and non-covalently with S-adenosyl-L-methionine.
|
1 | Q9H5I1 (/IDA) |
|
S-adenosyl-L-methionine binding GO:1904047
Interacting selectively and non-covalently with S-adenosyl-L-methionine.
|
1 | Q9EQQ0 (/ISO) |
|
Promoter-specific chromatin binding GO:1990841
Interacting selectively and non-covalently with a section of chromatin that is associated with gene promoter sequences of DNA.
|
1 | Q9Z148 (/ISO) |
There are 149 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Histone H3-K9 methylation GO:0051567
The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.
|
10 | C8VT24 (/IMP) M9PGH7 (/IMP) P45975 (/IMP) Q06ZW3 (/IMP) Q32KD2 (/IMP) Q6DGD3 (/IMP) Q8GZB6 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) Q9Z148 (/IMP) |
|
Long-term memory GO:0007616
The memory process that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation.
|
7 | A0A0G2JTA5 (/IMP) A0A0G2JZM5 (/IMP) A0A0G2K8H1 (/IMP) M9PGH7 (/IMP) Q6MG72 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
7 | O43463 (/ISS) Q2NL30 (/ISS) Q32PH7 (/ISS) Q4R3E0 (/ISS) Q5RB81 (/ISS) Q9H5I1 (/ISS) Q9H9B1 (/ISS) |
|
Histone methylation GO:0016571
The modification of histones by addition of methyl groups.
|
6 | O22781 (/IDA) O82175 (/IDA) P45975 (/IDA) Q8GZB6 (/IDA) Q8VZ17 (/IDA) Q9H9B1 (/IDA) |
|
Histone H3-K9 dimethylation GO:0036123
The modification of histone H3 by addition of two methyl groups to lysine at position 9 of the histone.
|
6 | O43463 (/ISS) Q2NL30 (/ISS) Q32PH7 (/ISS) Q4R3E0 (/ISS) Q5RB81 (/ISS) Q9H5I1 (/ISS) |
|
Histone H3-K9 trimethylation GO:0036124
The modification of histone H3 by addition of three methyl groups to lysine at position 9 of the histone.
|
6 | O43463 (/ISS) Q2NL30 (/ISS) Q32PH7 (/ISS) Q4R3E0 (/ISS) Q5RB81 (/ISS) Q9H5I1 (/ISS) |
|
Negative regulation of circadian rhythm GO:0042754
Any process that stops, prevents, or reduces the frequency, rate or extent of a circadian rhythm behavior.
|
6 | O43463 (/ISS) Q2NL30 (/ISS) Q32PH7 (/ISS) Q4R3E0 (/ISS) Q5RB81 (/ISS) Q9H5I1 (/ISS) |
|
Response to fungicide GO:0060992
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fungicide stimulus. Fungicides are chemicals used to kill fungi.
|
6 | A0A0G2JTA5 (/IEP) A0A0G2JZM5 (/IEP) A0A0G2K889 (/IEP) A0A0G2K8H1 (/IEP) D4A005 (/IEP) Q6MG72 (/IEP) |
|
Negative regulation of transcription from RNA polymerase II promoter GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
5 | O43463 (/IMP) O60016 (/IMP) Q5DW34 (/IMP) Q9H5I1 (/IMP) Q9Z148 (/IMP) |
|
Regulation of gene expression, epigenetic GO:0040029
Any process that modulates the frequency, rate or extent of gene expression; the process is mitotically or meiotically heritable, or is stably self-propagated in the cytoplasm of a resting cell, and does not entail a change in DNA sequence.
|
5 | O22781 (/TAS) O82175 (/TAS) Q9C5P0 (/TAS) Q9C5P4 (/TAS) Q9FF80 (/TAS) |
|
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
5 | O54864 (/IMP) Q06ZW3 (/IMP) Q32KD2 (/IMP) Q5DW34 (/IMP) Q9EQQ0 (/IMP) |
|
Instar larval or pupal development GO:0002165
The process whose specific outcome is the progression of the instar larva or pupa over time, from its formation to the mature structure. An example of this process is found in Drosophila melanogaster.
|
4 | M9PGH7 (/IMP) Q32KD2 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Response to nutrient levels GO:0031667
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.
|
4 | A0A0G2JTA5 (/IEP) A0A0G2JZM5 (/IEP) A0A0G2K8H1 (/IEP) Q6MG72 (/IEP) |
|
Wing disc development GO:0035220
Progression of the wing disc over time, from its initial formation through to its metamorphosis to form adult structures including the wing hinge, wing blade and pleura.
|
4 | M9PGH7 (/IMP) Q32KD2 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Cellular response to drug GO:0035690
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
|
4 | A0A0G2JTA5 (/IDA) A0A0G2JZM5 (/IDA) A0A0G2K8H1 (/IDA) Q6MG72 (/IDA) |
|
Regulation of DNA methylation GO:0044030
Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
|
4 | A0A0G2JTA5 (/IDA) A0A0G2JZM5 (/IDA) A0A0G2K8H1 (/IDA) Q6MG72 (/IDA) |
|
Response to ethanol GO:0045471
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus.
|
4 | A0A0G2JTA5 (/IEP) A0A0G2JZM5 (/IEP) A0A0G2K8H1 (/IEP) Q6MG72 (/IEP) |
|
Regulation of histone H3-K4 methylation GO:0051569
Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.
|
4 | A0A0G2JTA5 (/IMP) A0A0G2JZM5 (/IMP) A0A0G2K8H1 (/IMP) Q6MG72 (/IMP) |
|
Regulation of histone H3-K9 methylation GO:0051570
Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.
|
4 | A0A0G2JTA5 (/IMP) A0A0G2JZM5 (/IMP) A0A0G2K8H1 (/IMP) Q6MG72 (/IMP) |
|
Negative regulation of transcription from RNA polymerase II promoter GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
3 | O54864 (/ISO) Q9EQQ0 (/ISO) Q9Z148 (/ISO) |
|
Short-term memory GO:0007614
The memory process that deals with the storage, retrieval and modification of information received a short time (up to about 30 minutes) ago. This type of memory is typically dependent on direct, transient effects of second messenger activation.
|
3 | M9PGH7 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Larval locomotory behavior GO:0008345
Locomotory behavior in a larval (immature) organism.
|
3 | M9PGH7 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
3 | M9PGH7 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Ecdysone receptor-mediated signaling pathway GO:0035076
The series of molecular signals generated by ecdysone binding to the ecdysone receptor complex.
|
3 | M9PGH7 (/IGI) Q95RU8 (/IGI) Q9V3K8 (/IGI) |
|
Habituation GO:0046959
A decrease in a behavioral response to a repeated stimulus. This is exemplified by the failure of a person to show a startle response to a loud noise that has been repeatedly presented.
|
3 | M9PGH7 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Regulation of defense response to virus GO:0050688
Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism.
|
3 | M9PGH7 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Positive regulation of dendrite morphogenesis GO:0050775
Any process that activates or increases the frequency, rate or extent of dendrite morphogenesis.
|
3 | M9PGH7 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Histone H3-K9 methylation GO:0051567
The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.
|
3 | O54864 (/IDA) P45975 (/IDA) Q32KD2 (/IDA) |
|
Positive regulation of histone H3-K9 dimethylation GO:1900111
Any process that activates or increases the frequency, rate or extent of histone H3-K9 dimethylation.
|
3 | M9PGH7 (/IMP) Q95RU8 (/IMP) Q9V3K8 (/IMP) |
|
Hematopoietic progenitor cell differentiation GO:0002244
The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells.
|
2 | A4FUM2 (/IMP) B0S6M0 (/IMP) |
|
Regulation of DNA replication GO:0006275
Any process that modulates the frequency, rate or extent of DNA replication.
|
2 | Q96KQ7 (/IMP) Q9Z148 (/IMP) |
|
DNA methylation GO:0006306
The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
|
2 | Q5DW34 (/IDA) Q9Z148 (/IDA) |
|
DNA methylation GO:0006306
The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
|
2 | Q96KQ7 (/ISS) Q9H9B1 (/ISS) |
|
Chromatin organization GO:0006325
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.
|
2 | Q294B9 (/ISS) Q8BHB2 (/ISS) |
|
Chromatin silencing at telomere GO:0006348
Repression of transcription of telomeric DNA by altering the structure of chromatin.
|
2 | C8VT24 (/IMP) P45975 (/IMP) |
|
Histone methylation GO:0016571
The modification of histones by addition of methyl groups.
|
2 | Q96KQ7 (/IMP) Q9Z148 (/IMP) |
|
Histone methylation GO:0016571
The modification of histones by addition of methyl groups.
|
2 | Q5DW34 (/ISO) Q9Z148 (/ISO) |
|
Histone methylation GO:0016571
The modification of histones by addition of methyl groups.
|
2 | Q294B9 (/ISS) Q8BHB2 (/ISS) |
|
Peptidyl-lysine dimethylation GO:0018027
The methylation of peptidyl-lysine to form peptidyl-N6,N6-dimethyl-L-lysine.
|
2 | Q96KQ7 (/IDA) Q9H9B1 (/IDA) |
|
Peptidyl-lysine dimethylation GO:0018027
The methylation of peptidyl-lysine to form peptidyl-N6,N6-dimethyl-L-lysine.
|
2 | Q5DW34 (/ISO) Q9Z148 (/ISO) |
|
Chromatin silencing at centromere GO:0030702
Repression of transcription of centromeric DNA by altering the structure of chromatin.
|
2 | O60016 (/IMP) P45975 (/IMP) |
|
Histone lysine methylation GO:0034968
The modification of a histone by addition of one or more methyl groups to a lysine residue.
|
2 | O54864 (/IGI) Q9EQQ0 (/IGI) |
|
Histone H3-K9 dimethylation GO:0036123
The modification of histone H3 by addition of two methyl groups to lysine at position 9 of the histone.
|
2 | O54864 (/IMP) Q9EQQ0 (/IMP) |
|
Histone H3-K9 trimethylation GO:0036124
The modification of histone H3 by addition of three methyl groups to lysine at position 9 of the histone.
|
2 | O54864 (/IMP) Q9EQQ0 (/IMP) |
|
Regulation of gene expression, epigenetic GO:0040029
Any process that modulates the frequency, rate or extent of gene expression; the process is mitotically or meiotically heritable, or is stably self-propagated in the cytoplasm of a resting cell, and does not entail a change in DNA sequence.
|
2 | O22781 (/IMP) Q32KD2 (/IMP) |
|
Negative regulation of circadian rhythm GO:0042754
Any process that stops, prevents, or reduces the frequency, rate or extent of a circadian rhythm behavior.
|
2 | O54864 (/IMP) Q9EQQ0 (/IMP) |
|
Female germ-line stem cell asymmetric division GO:0048132
The self-renewing division of a germline stem cell in the female gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the female gametes.
|
2 | P45975 (/IDA) Q32KD2 (/IDA) |
|
Oogenesis GO:0048477
The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
|
2 | P45975 (/IDA) Q32KD2 (/IDA) |
|
Oogenesis GO:0048477
The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
|
2 | P45975 (/IMP) Q32KD2 (/IMP) |
|
Histone H3-K9 methylation GO:0051567
The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.
|
2 | O54864 (/IGI) Q9EQQ0 (/IGI) |
|
Cellular response to hypoxia GO:0071456
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
2 | O43463 (/IDA) Q9H5I1 (/IDA) |
|
Cellular response to hypoxia GO:0071456
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
2 | O54864 (/ISO) Q9EQQ0 (/ISO) |
|
RNA-directed DNA methylation GO:0080188
An epigenetic RNA-based gene silencing process first elucidated in plants whereby 24-nt small interfering RNAs (siRNAs) guide DNA methyltransferases to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. In general this process consists of three phases: biogenesis of siRNAs, scaffold RNA production, and the formation of the guiding complex that recruits de novo DNA methyltransferases to the target loci.
|
2 | O22781 (/IMP) Q9T0G7 (/IMP) |
|
Regulation of signal transduction by p53 class mediator GO:1901796
Any process that modulates the frequency, rate or extent of signal transduction by p53 class mediator.
|
2 | Q96KQ7 (/TAS) Q9H9B1 (/TAS) |
|
Negative regulation of transcription from RNA polymerase II promoter GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
1 | Q96KQ7 (/IDA) |
|
Chromatin silencing at rDNA GO:0000183
Repression of transcription of ribosomal DNA by altering the structure of chromatin.
|
1 | O43463 (/IDA) |
|
Chromatin silencing at rDNA GO:0000183
Repression of transcription of ribosomal DNA by altering the structure of chromatin.
|
1 | O60016 (/IMP) |
|
Chromatin silencing at rDNA GO:0000183
Repression of transcription of ribosomal DNA by altering the structure of chromatin.
|
1 | O54864 (/ISO) |
|
Chromatin silencing at rDNA GO:0000183
Repression of transcription of ribosomal DNA by altering the structure of chromatin.
|
1 | O43463 (/TAS) |
|
Mitotic cell cycle GO:0000278
Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.
|
1 | Q06ZW3 (/ISS) |
|
Heart looping GO:0001947
The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceeding septation.
|
1 | Q06ZW3 (/IMP) |
|
Regulation of DNA replication GO:0006275
Any process that modulates the frequency, rate or extent of DNA replication.
|
1 | Q9Z148 (/ISO) |
|
DNA methylation GO:0006306
The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
|
1 | P45975 (/IMP) |
|
DNA packaging GO:0006323
Any process in which DNA and associated proteins are formed into a compact, orderly structure.
|
1 | O54864 (/TAS) |
|
Chromatin organization GO:0006325
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.
|
1 | Q9H9B1 (/IDA) |
|
Chromatin organization GO:0006325
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.
|
1 | P45975 (/IMP) |
|
Chromatin organization GO:0006325
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.
|
1 | Q5DW34 (/ISO) |
|
Chromatin organization GO:0006325
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.
|
1 | P45975 (/NAS) |
|
Chromatin organization GO:0006325
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.
|
1 | O43463 (/TAS) |
|
Chromatin assembly or disassembly GO:0006333
The formation or destruction of chromatin structures.
|
1 | Q9H5I1 (/IMP) |
|
Chromatin assembly or disassembly GO:0006333
The formation or destruction of chromatin structures.
|
1 | Q9EQQ0 (/ISO) |
|
Chromatin assembly or disassembly GO:0006333
The formation or destruction of chromatin structures.
|
1 | Q9EQQ0 (/ISS) |
|
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
1 | Q9H5I1 (/IDA) |
|
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
1 | Q9EQQ0 (/ISO) |
|
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
1 | Q9EQQ0 (/ISS) |
|
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
1 | O60016 (/NAS) |
|
Chromatin silencing GO:0006342
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
|
1 | P45975 (/IMP) |
|
Chromatin silencing GO:0006342
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
|
1 | O54864 (/TAS) |
|
Chromatin silencing at telomere GO:0006348
Repression of transcription of telomeric DNA by altering the structure of chromatin.
|
1 | Q294B9 (/ISS) |
|
Chromatin silencing at telomere GO:0006348
Repression of transcription of telomeric DNA by altering the structure of chromatin.
|
1 | O60016 (/TAS) |
|
Regulation of transcription from RNA polymerase II promoter GO:0006357
Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
1 | Q9Z148 (/IMP) |
|
Cellular response to DNA damage stimulus GO:0006974
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
|
1 | O43463 (/IDA) |
|
Cellular response to DNA damage stimulus GO:0006974
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
|
1 | O54864 (/ISO) |
|
Chromosome segregation GO:0007059
The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles.
|
1 | Q06ZW3 (/ISS) |
|
Synaptonemal complex assembly GO:0007130
The cell cycle process in which the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination.
|
1 | Q9Z148 (/IMP) |
|
Male meiosis GO:0007140
A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.
|
1 | Q9EQQ0 (/IEP) |
|
Germ cell development GO:0007281
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
|
1 | Q9Z148 (/IMP) |
|
Spermatid development GO:0007286
The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.
|
1 | Q9Z148 (/IMP) |
|
Determination of left/right symmetry GO:0007368
The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry.
|
1 | Q06ZW3 (/IMP) |
|
Donor selection GO:0007535
The process that determines which donor locus a cell uses, in preference to another, in mating type switching.
|
1 | O60016 (/IMP) |
|
Regulation of cell size GO:0008361
Any process that modulates the size of a cell.
|
1 | Q9C5P0 (/IMP) |
|
Cellular response to starvation GO:0009267
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment.
|
1 | Q96KQ7 (/IDA) |
|
Cellular response to starvation GO:0009267
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment.
|
1 | Q9Z148 (/ISO) |
|
DNA mediated transformation GO:0009294
The introduction and uptake of foreign genetic material (DNA or RNA) into a cell, and often the expression of that genetic material.
|
1 | Q9T0G7 (/IMP) |
|
Fertilization GO:0009566
The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).
|
1 | Q9Z148 (/IMP) |
|
Embryo development GO:0009790
The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.
|
1 | Q5DW34 (/IMP) |
|
Embryo development GO:0009790
The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.
|
1 | Q9H9B1 (/ISS) |
|
Response to chitin GO:0010200
A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
|
1 | O82175 (/IEP) |
|
Maintenance of DNA methylation GO:0010216
Any process involved in maintaining the methylation state of a nucleotide sequence.
|
1 | Q8GZB6 (/IDA) |
|
DNA methylation on cytosine within a CG sequence GO:0010424
The covalent transfer of a methyl group to C-5 or N-4 of a cytosine located within a CG sequence in a DNA molecule.
|
1 | Q9Z148 (/IMP) |
|
Gene silencing GO:0016458
Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.
|
1 | P45975 (/IMP) |
|
Gene silencing GO:0016458
Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.
|
1 | P45975 (/TAS) |
|
Histone modification GO:0016570
The covalent alteration of one or more amino acid residues within a histone protein.
|
1 | P45975 (/IMP) |
|
Histone methylation GO:0016571
The modification of histones by addition of methyl groups.
|
1 | P45975 (/TAS) |
|
Peptidyl-lysine methylation GO:0018022
The methylation of peptidyl-lysine to form either the mono-, di- or trimethylated derivative.
|
1 | Q8GZB6 (/IDA) |
|
Peptidyl-lysine monomethylation GO:0018026
The methylation of peptidyl-lysine to form peptidyl-N6-methyl-L-lysine.
|
1 | Q5DW34 (/IMP) |
|
Peptidyl-lysine monomethylation GO:0018026
The methylation of peptidyl-lysine to form peptidyl-N6-methyl-L-lysine.
|
1 | Q9H9B1 (/ISS) |
|
Peptidyl-lysine dimethylation GO:0018027
The methylation of peptidyl-lysine to form peptidyl-N6,N6-dimethyl-L-lysine.
|
1 | Q5DW34 (/IMP) |
|
Peptidyl-lysine dimethylation GO:0018027
The methylation of peptidyl-lysine to form peptidyl-N6,N6-dimethyl-L-lysine.
|
1 | Q9Z148 (/ISS) |
|
Neurogenesis GO:0022008
Generation of cells within the nervous system.
|
1 | A8TT22 (/IGI) |
|
Chromatin silencing at silent mating-type cassette GO:0030466
Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.
|
1 | O60016 (/IMP) |
|
Chromatin silencing at centromere GO:0030702
Repression of transcription of centromeric DNA by altering the structure of chromatin.
|
1 | Q294B9 (/ISS) |
|
Exocrine pancreas development GO:0031017
The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells.
|
1 | A8TT22 (/IGI) |
|
Exocrine pancreas development GO:0031017
The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells.
|
1 | Q6DGD3 (/IMP) |
|
Chromatin silencing by small RNA GO:0031048
Repression of transcription by conversion of large regions of DNA into heterochromatin, directed by small RNAs sharing sequence identity to the repressed region.
|
1 | O82175 (/IEP) |
|
Chromatin silencing by small RNA GO:0031048
Repression of transcription by conversion of large regions of DNA into heterochromatin, directed by small RNAs sharing sequence identity to the repressed region.
|
1 | O60016 (/IMP) |
|
Heterochromatin assembly GO:0031507
The assembly of chromatin into heterochromatin, a compact and highly condensed form that is often, but not always, transcriptionally silent.
|
1 | P45975 (/IMP) |
|
Cellular protein localization GO:0034613
Any process in which a protein is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.
|
1 | O60016 (/IMP) |
|
Histone lysine methylation GO:0034968
The modification of a histone by addition of one or more methyl groups to a lysine residue.
|
1 | Q96KQ7 (/IDA) |
|
Histone lysine methylation GO:0034968
The modification of a histone by addition of one or more methyl groups to a lysine residue.
|
1 | Q9Z148 (/ISO) |
|
Organ growth GO:0035265
The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function.
|
1 | Q9Z148 (/IMP) |
|
Phenotypic switching GO:0036166
A reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations. Phenotypic switching involves changes in cell morphology and altered gene expression patterns. For example, Candida albicans switches from white cells to opaque cells for sexual mating. Phenotypic switching also occurs in multicellular organisms; smooth muscle cells (SMCs) exhibit phenotypic transitions to allow rapid adaption to fluctuating environmental cues.
|
1 | Q9Z148 (/IMP) |
|
DNA hypermethylation GO:0044026
An increase in the epigenetic methylation of cytosine and adenosine residues in DNA.
|
1 | Q32KD2 (/IMP) |
|
Histone H3-K14 acetylation GO:0044154
The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 14 of the histone.
|
1 | C8VT24 (/IMP) |
|
Meiotic telomere clustering GO:0045141
The cell cycle process in which the dynamic reorganization of telomeres occurs in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body. This plays an important role in progression through meiosis and precedes synapsis.
|
1 | O60016 (/IMP) |
|
Negative regulation of gene expression, epigenetic GO:0045814
Any epigenetic process that stops, prevents or reduces the rate of gene expression.
|
1 | Q32KD2 (/IDA) |
|
Behavioral response to cocaine GO:0048148
Any process that results in a change in the behavior of an organism as a result of a cocaine stimulus.
|
1 | Q9Z148 (/IMP) |
|
Leaf development GO:0048366
The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure.
|
1 | Q9C5P0 (/IMP) |
|
Oogenesis GO:0048477
The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
|
1 | Q28Z18 (/ISS) |
|
Neuron fate specification GO:0048665
The process in which a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.
|
1 | Q9Z148 (/IMP) |
|
Negative regulation of transcription involved in meiotic cell cycle GO:0051038
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription involved in the meiotic cell cycle.
|
1 | Q32KD2 (/IMP) |
|
Negative regulation of transcription involved in meiotic cell cycle GO:0051038
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription involved in the meiotic cell cycle.
|
1 | Q28Z18 (/ISS) |
|
Chromosome organization GO:0051276
A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome.
|
1 | P45975 (/IMP) |
|
Histone H3-K9 methylation GO:0051567
The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.
|
1 | Q294B9 (/ISS) |
|
Regulation of histone H3-K9 methylation GO:0051570
Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.
|
1 | A8TT22 (/IGI) |
|
Retina morphogenesis in camera-type eye GO:0060042
The process in which the anatomical structure of the retina is generated and organized.
|
1 | Q6DGD3 (/IMP) |
|
Camera-type eye photoreceptor cell differentiation GO:0060219
The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye.
|
1 | A8TT22 (/IGI) |
|
Camera-type eye photoreceptor cell differentiation GO:0060219
The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye.
|
1 | A8TT22 (/IMP) |
|
Regulation of gene silencing GO:0060968
Any process that modulates the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.
|
1 | Q32KD2 (/IMP) |
|
Histone H3-K27 methylation GO:0070734
The modification of histone H3 by addition of one or more methyl groups to lysine at position 27 of the histone.
|
1 | Q9Z148 (/IMP) |
|
Heterochromatin organization involved in chromatin silencing GO:0070868
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin and contributes to chromatin silencing.
|
1 | P45975 (/IMP) |
|
Left/right axis specification GO:0070986
The establishment, maintenance and elaboration of the left/right axis. The left/right axis is defined by a line that runs orthogonal to both the anterior/posterior and dorsal/ventral axes. Each side is defined from the viewpoint of the organism rather of the observer (as per anatomical axes).
|
1 | Q06ZW3 (/IMP) |
|
Cellular response to cocaine GO:0071314
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.
|
1 | Q9Z148 (/IDA) |
|
Regulation of production of siRNA involved in RNA interference GO:0090065
Any process that modulates the frequency, rate or extent of the production of siRNA, the cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
|
1 | O60016 (/IMP) |
|
Positive regulation of methylation-dependent chromatin silencing GO:0090309
Any process that increases the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin.
|
1 | Q32KD2 (/IMP) |
|
Heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region GO:1902368
Any heterochromatin maintenance that is involved in chromatin silencing at centromere outer repeat region.
|
1 | O60016 (/IGI) |
|
Negative regulation of autophagosome assembly GO:1902902
Any process that stops, prevents or reduces the frequency, rate or extent of autophagosome assembly.
|
1 | Q9Z148 (/IMP) |
|
Chromatin silencing at centromere outer repeat region GO:1990141
Repression of transcription of DNA at the outer repeat region of a regional centromere by altering the structure of chromatin.
|
1 | O60016 (/IMP) |
|
Negative regulation of response to gamma radiation GO:2001229
Any process that stops, prevents or reduces the frequency, rate or extent of response to gamma radiation.
|
1 | P45975 (/IMP) |
There are 42 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
20 |
A0A0G2JTA5 (/IDA)
A0A0G2JZM5 (/IDA)
A0A0G2K8H1 (/IDA)
E9PRF4 (/IDA)
M9PGH7 (/IDA)
O22781 (/IDA)
O43463 (/IDA)
O54864 (/IDA)
O60016 (/IDA)
Q32KD2 (/IDA)
(10 more) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | Q06ZW3 (/ISS) Q28Z18 (/ISS) Q2NL30 (/ISS) Q5RB81 (/ISS) Q96KQ7 (/ISS) Q9H9B1 (/ISS) |
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
6 | A0A024RCN9 (/IDA) A2ABF8 (/IDA) A2ABF9 (/IDA) E9PRF4 (/IDA) Q96KQ7 (/IDA) Q9H9B1 (/IDA) |
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
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5 | O43463 (/TAS) Q96KQ7 (/TAS) Q9H5I1 (/TAS) Q9H9B1 (/TAS) Q9Z148 (/TAS) |
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Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
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4 | A0A024RCN9 (/IDA) A2ABF8 (/IDA) A2ABF9 (/IDA) Q96KQ7 (/IDA) |
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Heterochromatin GO:0000792
A compact and highly condensed form of chromatin.
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3 | O43463 (/IDA) O54864 (/IDA) P45975 (/IDA) |
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Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
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3 | O54864 (/ISO) Q5DW34 (/ISO) Q9Z148 (/ISO) |
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Polytene chromosome interband GO:0005705
A stretch of less tightly packed chromatin along the polytene chromosome, found between bands.
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3 | M9PGH7 (/IDA) Q95RU8 (/IDA) Q9V3K8 (/IDA) |
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Heterochromatin GO:0000792
A compact and highly condensed form of chromatin.
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2 | Q2NL30 (/ISS) Q5RB81 (/ISS) |
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Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
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2 | Q5DW34 (/ISO) Q9Z148 (/ISO) |
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Chromatin silencing complex GO:0005677
Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing.
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2 | O43463 (/IDA) O54864 (/IDA) |
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Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
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2 | O22781 (/IDA) Q9EQQ0 (/IDA) |
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Chromosome, centromeric region GO:0000775
The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
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1 | P45975 (/TAS) |
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Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
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1 | Q9H5I1 (/IDA) |
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Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
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1 | Q9EQQ0 (/ISO) |
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Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
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1 | Q9EQQ0 (/ISS) |
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Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
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1 | Q96KQ7 (/IDA) |
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Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
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1 | Q9Z148 (/ISO) |
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Heterochromatin GO:0000792
A compact and highly condensed form of chromatin.
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1 | O54864 (/ISO) |
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Heterochromatin GO:0000792
A compact and highly condensed form of chromatin.
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1 | P45975 (/TAS) |
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Condensed nuclear chromosome GO:0000794
A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct nuclear chromosome.
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1 | O43463 (/TAS) |
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Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
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1 | Q9H9B1 (/IC) |
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Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
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1 | O43463 (/TAS) |
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Chromatin silencing complex GO:0005677
Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing.
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1 | O54864 (/ISO) |
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Chromosome GO:0005694
A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
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1 | Q9C5P4 (/IDA) |
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Polytene chromosome GO:0005700
A type of chromosome in a polyploid cell, formed when multiple copies of homologous chromosomes are aligned side by side to give a giant chromosome in which distinct chromosome bands are readily visible.
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1 | Q32KD2 (/IDA) |
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Polytene chromosome chromocenter GO:0005701
A region at which the centric regions of polytene chromosomes are joined together.
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1 | P45975 (/IDA) |
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Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
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1 | O54864 (/TAS) |
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Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
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1 | Q32KD2 (/IDA) |
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Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
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1 | E9PRF4 (/IDA) |
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Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
1 | E9PRF4 (/IDA) |
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Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
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1 | Q9H9B1 (/IDA) |
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Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
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1 | Q5DW34 (/ISO) |
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Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
1 | Q9Z148 (/ISO) |
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Nuclear pericentric heterochromatin GO:0031618
Nuclear heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
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1 | O60016 (/TAS) |
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Mating-type region heterochromatin GO:0031934
Heterochromatic regions of the chromosome found at silenced mating-type loci.
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1 | O60016 (/NAS) |
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RDNA heterochromatin GO:0033553
A region of heterochromatin located at the rDNA repeats in a chromosome.
|
1 | O43463 (/IDA) |
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RDNA heterochromatin GO:0033553
A region of heterochromatin located at the rDNA repeats in a chromosome.
|
1 | O54864 (/ISO) |
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Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
|
1 | E9PRF4 (/IDA) |
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CLRC ubiquitin ligase complex GO:0043494
An cullin-dependent E3 ubiquitin ligase/histone H3-K9 methyltransferase complex essential for heterochromatin assembly by RNAi.
|
1 | O60016 (/IDA) |
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Mitotic spindle pole body GO:0044732
The microtubule organizing center that forms as part of the mitotic cell cycle; functionally homologous to the animal cell centrosome.
|
1 | O60016 (/IDA) |
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Nuclear subtelomeric heterochromatin GO:1990707
Heterochromatic regions of the chromosome found at the subtelomeric regions of a chromosome in the nucleus.
|
1 | O60016 (/NAS) |
