CATH Superfamily 1.10.150.20

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Enzyme?	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
4839	Holliday junction DNA helicase RuvA	37706	EC	3D	1c7yA02	-	71.8
26991	Transcription elongation factor NusA	27495		3D	1wcnA01	-	95.7
27158	Transcription elongation factor NusA	24973		3D	1u9lA00	-	92.8
27356	RNA polymerase subunit alpha	21039	EC	3D	1cooA00	-	95.9
27387	DNA polymerase I PolA	17964	EC	3D	1exnA01	-	94.5
27104	DNA polymerase IV 2	9817	EC	3D	4ir1A03	-	100.0
26552	NAD-dependent DNA ligase LigA	9186	EC	3D	2owoA06	-	88.6
25329	DNA polymerase I, thermostable	8335	EC	3D	1d8yA04	-	98.4
26549	Holliday junction DNA helicase RuvA	7280	EC		-	-	99.3
27260	UvrABC system protein C	6895	EC	3D	1kftA00	-	93.8
27145	DNA integrity scanning protein DisA	5867	EC	3D	3c1yA03	-	99.5
14177	DNA polymerase V UmuC	5489	EC		-	-	88.3
26553	NAD-dependent DNA ligase LigA	5360	EC	3D	2owoA07	-	94.4
27289	NAD-dependent DNA ligase LigA	5015	EC		-	-	99.0
26494	Holliday junction DNA helicase RuvA	4486	EC	3D	2h5xA02	-	100.0
26025	NAD-dependent DNA ligase LigA	3810	EC		-	-	97.4
26469	NAD-dependent DNA ligase LigA	3405	EC		-	-	92.1
26952	ATP-dependent DNA helicase RuvA	3065	EC		-	-	100.0
26327	Holliday junction DNA helicase RuvA	2691	EC		-	-	97.4
27233	DNA repair protein RAD51	2537	EC	3D	1b22A00	-	76.8
27404	NADH-quinone oxidoreductase, E subunit	2443	EC		-	-	98.3
27135	NAD-dependent DNA ligase LigA	2276	EC		-	-	89.1
26250	Holliday junction DNA helicase RuvA	2272	EC		-	-	97.2
26304	DNA-directed RNA polymerase subunit alpha	2073	EC	3D	2maxA00	-	94.0
26564	NAD-dependent DNA ligase LigA	2021	EC		-	-	97.1
27263	ATP-dependent DNA helicase RuvA	1972	EC		-	-	99.4
26542	Holliday junction ATP-dependent DNA helicase RuvA	1942	EC	3D	1ixrA02	-	99.5
27434	U5 small nuclear ribonucleoprotein-specific helicase	1887	EC	3D	2q0zX02	-	97.5
25211	ATP-dependent DNA helicase RuvA	1730	EC		-	-	89.8
27307	ATP-dependent DNA helicase RuvA	1697	EC		-	-	99.7
6288	Holliday junction ATP-dependent DNA helicase RuvA	1525	EC		-	-	58.6
26375	DNA ligase domain protein	1365	EC		-	-	99.1
25990	DNA ligase	1176	EC		-	-	90.5
26439	NAD-dependent DNA ligase LigA	1135	EC		-	-	100.0
27221	DNA repair protein REV1	1134	EC	3D	3gqcA03	-	98.8
26993	DNA ligase 1	1121	EC		-	-	87.0
24975	DNA polymerase IV	1039	EC		-	-	43.2
25027	DNA polymerase V subunit UmuC	1023	EC		-	-	87.8
26851	DNA integrity scanning protein DisA	910	EC		-	-	94.3
27148	Holliday junction DNA helicase RuvA	903	EC		-	-	99.2
26233	DNA ligase domain protein	902	EC		-	-	90.5
26535	DNA ligase Polydeoxyribonucleotide synthase (NAD+	874	EC		-	-	95.5
27286	NAD-dependent DNA ligase LigA	824	EC		-	-	96.2
27139	UvrABC system protein C	769			-	-	99.5
26203	NAD-dependent DNA ligase LigB	755	EC		-	-	91.3
26986	ATP-dependent DNA helicase RuvA	743	EC		-	-	98.0
26679	DNA integrity scanning protein DisA	695	EC		-	-	65.6
27081	NAD-dependent DNA ligase LigA	695	EC		-	-	98.6
27117	DNA-directed RNA polymerase 3	601	EC	3D	1aroP05	-	75.3
5475	Holliday junction ATP-dependent DNA helicase RuvA	596	EC		-	-	66.5
27024	Mutant DNA polymerase beta	545	EC	3D	1bpxA02	-	93.6
27241	DNA excision repair protein ERCC-1	531	EC	3D	1z00A01	-	95.6
27275	NAD-dependent DNA ligase LigB	524	EC		-	-	89.5
27008	DNA polymerase IV 1	508	EC		-	-	97.1
27322	Holliday junction ATP-dependent DNA helicase RuvA	477	EC		-	-	95.6
26412	Holliday junction DNA helicase RuvA	464	EC		-	-	98.5
26588	NAD-dependent DNA ligase LigA	424	EC		-	-	99.6
6009	Holliday junction ATP-dependent DNA helicase RuvA	415	EC		-	-	1.7
26493	NAD-dependent DNA ligase LigA	415	EC		-	-	99.2
27227	UvrABC system protein C	381	EC	3D	2nrtA02	-	100.0
27017	DNA ligase	374	EC		-	-	82.4
26995	UvrABC system protein C	371			-	-	92.1
1091	DNA polymerase I	363	EC		-	-	23.6
4110	DNA polymerase V subunit UmuC	345	EC		-	-	0.0
26026	DNA polymerase lambda	328	EC	3D	1rztA02	-	85.3
27077	DNA polymerase eta	276	EC	3D	3mr2A03	-	92.3
27163	ATP-dependent DNA helicase Hel308	269	EC	3D	2zj5A04	-	97.7
26289	DNA ligase	265	EC		-	-	94.5
26569	NAD-dependent DNA ligase LigA	264	EC		-	-	93.7
27253	DNA ligase 2	256	EC		-	-	94.9
5088	Holliday junction ATP-dependent DNA helicase RuvA	254	EC		-	-	4.8
26484	DNA ligase 1	241	EC		-	-	97.0
24995	Holliday junction ATP-dependent DNA helicase RuvA	227	EC		-	-	21.7
9492	Ribonuclease RNaseH	214	EC	3D	1tfrA02	-	4.8
12044	DNA polymerase IV	210	EC		-	-	6.8
27082	Fanconi anemia-associated protein of 24 kDa	207		3D	2lyhA00	-	88.2
26309	Holliday junction ATP-dependent DNA helicase RuvA	205	EC		-	-	90.8
27341	DNA ligase NAD+	203	EC		-	-	45.2
27231	ATP-dependent DNA helicase Hel308	202	EC		-	-	92.0
26453	DNA nucleotidylexotransferase	196	EC	3D	1jmsA02	-	88.7
26488	NAD-dependent DNA ligase LigA	190	EC		-	-	94.8
27032	DNA ligase B	184	EC		-	-	89.5
25008	DNA ligase NAD+	172	EC		-	-	15.6
27271	Flap endonuclease 1 protein	172		3D	1rxvA02	-	97.7
2058	DNA ligase	161	EC		-	-	3.9
25143	Exonuclease 1, isoform CRA_a	159		3D	3qe9Y02	-	53.4
26938	DNA ligase 1	154	EC		-	-	96.9
24981	DNA polymerase iota	134	EC	3D	1t3nA03	-	63.7
27138	Hypothetical NAD-dependent DNA ligase	116	EC		-	-	99.6
25606	DNA-directed DNA/RNA polymerase mu	107	EC	3D	4lzdA02	-	65.8
26343	DNA ligase	99	EC		-	-	89.0
24753	DNA-directed RNA polymerase, mitochondrial	99	EC		-	-	53.5
25961	DNA repair protein RAD51 homolog 3	97			-	-	70.7
27362	DNA repair protein RAD51-like 4	97		3D	2kz3A00	-	76.6
26175	DNA polymerase IV	97	EC		-	-	80.6
27154	NAD-dependent DNA ligase LigB	88	EC		-	-	76.1
25569	DNA ligase 2	87	EC		-	-	47.0
4724	Holliday junction ATP-dependent DNA helicase RuvA	78	EC		-	-	17.1
24852	DNA repair endonuclease XPF	78		3D	1z00B00	-	74.6
27175	Flap endonuclease 1	72		3D	1a76A02	-	85.1
25370	Fanconi anemia, complementation group M	71	EC	3D	4bxoA02	-	55.2
26373	DNA ligase	69	EC		-	-	88.7
25084	DNA polymerase I	69	EC		-	-	35.1
26948	DNA polymerase IV 2	66	EC		-	-	73.9
13102	Din7p	65			-	-	0.0
15358	DNA polymerase/3'-5' exonuclease X	62	EC		-	-	9.5
3649	DNA polymerase eta	60	EC	3D	1jihA03	-	1.6
13061	Exodeoxyribonuclease 1	59			-	-	0.0
26011	DNA ligase	58	EC		-	-	96.5
4117	DNA repair protein REV1	57		3D	2aq4A04	-	1.4
26120	Holliday junction ATP-dependent DNA helicase ruvA	57	EC		-	-	79.7
25283	DNA ligase	56	EC		-	-	58.1
27003	DNA ligase	56	EC	3D	1dgsA06	-	98.5
25445	DNA repair and recombination protein RadA	55			-	-	30.4
24878	NAD-dependent DNA ligase LigA	53	EC		-	-	42.4
27447	DNA ligase	52	EC		-	-	95.8
27071	DNA ligase	52	EC		-	-	67.8
26348	DNA ligase NAD+	52	EC		-	-	78.6
27247	ATP-dependent DNA helicase Hel308	51	EC		-	-	94.4
26674	DNA ligase	50	EC		-	-	84.9
25427	DNA ligase, NAD-dependent	45	EC		-	-	19.7
25490	Exonuclease 1	44			-	-	38.1
6947	NAD-DEPENDENT DNA LIGASE	42	EC		-	-	14.6
25882	DNA ligase	37	EC		-	-	66.8
18472	DNA integrity scanning protein DisA	37	EC		-	-	15.8
16591	NAD-dependent DNA ligase	36	EC		-	-	0.0
6013	Holliday junction DNA helicase RuvA	36	EC		-	-	1.6
16980	DNA ligase	36	EC		-	-	0.0
2230	DNA ligase B	36	EC		-	-	65.6
26754	DNA ligase NAD+	35	EC		-	-	83.6
27038	UvrABC system protein C	35			-	-	85.3
27391	UvrABC system protein C	35			-	-	75.3
25164	DNA ligase	34	EC		-	-	54.8
26190	DNA polymerase IV	34	EC		-	-	58.2
4691	DNA polymerase IV	34	EC		-	-	46.6
26998	UvrABC system protein C	33			-	-	92.0
27088	DNA repair and recombination protein RadA	32	EC	3D	1t4gA01	-	87.2
2910	DNA ligase	30	EC		-	-	8.8
24856	DNA repair and recombination protein RadA	28		3D	2bkeA01	-	32.1
26650	DNA polymerase IV	26	EC		-	-	40.1
11675	UvrABC system protein C	25			-	-	0.0
26090	Holliday junction ATP-dependent DNA helicase RuvA	25	EC		-	-	56.7
26350	DNA repair and recombination protein RadA	25		3D	1pznA01	-	86.3
8275	Holliday junction ATP-dependent DNA helicase RuvA	24	EC		-	-	23.1
8136	Holliday junction ATP-dependent DNA helicase RuvA	23	EC		-	-	1.6
27228	Probable RAD2-like endonuclease 076L	21			-	-	31.5
25829	DNA repair and recombination protein RadA	21			-	-	19.2
27189	UvrABC system protein C	20			-	-	97.3
25659	DNA-directed DNA polymerase	19	EC		-	-	35.1
16488	DNA-directed RNA polymerase subunit alpha	18	EC		-	-	14.8
22023	ATP-dependent DNA helicase MER3 homolog	18	EC		-	-	34.7
25570	DNA ligase	18	EC		-	-	49.4
4528	DNA polymerase V subunit UmuC	18	EC		-	-	7.0
25147	DNA ligase	17	EC		-	-	46.8
27346	DNA ligase B	17	EC		-	-	46.5
27083	DNA ligase	17	EC		-	-	91.9
9490	DNA ligase	16	EC		-	-	10.7
26106	DNA ligase	16	EC		-	-	52.8
6858	Holliday junction ATP-dependent DNA helicase RuvA	15	EC		-	-	14.8
26051	UvrABC system protein C	15			-	-	58.2
25373	DNA ligase	15	EC		-	-	24.2
27164	UvrABC system protein C	14			-	-	89.2
4888	Exonuclease 1	14			-	-	25.5
21082	DNA polymerase lambda family protein	14	EC		-	-	23.2
24968	DNA ligase	13	EC		-	-	29.1
23239	DNA ligase	12	EC		-	-	18.6
25694	DNA polymerase IV	11	EC		-	-	38.0
24762	DNA polymerase nu	11	EC		-	-	18.1
2600	DNA ligase	11	EC		-	-	3.0
25066	DNA polymerase IV	10	EC		-	-	34.5
8191	DNA ligase	9	EC		-	-	1.7
25467	DNA repair and recombination protein RadA	9			-	-	25.9
12335	DNA ligase 1	9	EC		-	-	19.2
8814	DNA ligase	9	EC		-	-	19.9
25471	DNA ligase	9	EC		-	-	38.6
25892	DNA ligase	8	EC		-	-	10.1
16987	DNA polymerase IV	8	EC		-	-	5.9
2694	DNA ligase	7	EC		-	-	5.8
2696	DNA ligase	7	EC		-	-	6.1
2603	DNA ligase	7	EC		-	-	2.9
2112	Holliday junction ATP-dependent DNA helicase RuvA	7	EC		-	-	1.9
9590	DNA ligase Polydeoxyribonucleotide synthase [NAD(+	7	EC		-	-	2.8
25794	Holliday junction ATP-dependent DNA helicase RuvA	6	EC		-	-	36.9
8250	Holliday junction ATP-dependent DNA helicase RuvA	6	EC		-	-	6.2
6845	DNA ligase	6	EC		-	-	1.7
12635	Transcription elongation factor NusA	6			-	-	15.8
8484	DNApol-iota, isoform A	6	EC		-	-	12.4
26971	Probable flap endonuclease 1 homolog	6		3D	3q8kA02	-	45.2
1690	DNA polymerase	6	EC		-	-	3.2
27063	DNA ligase	5	EC		-	-	79.5
25823	NAD-dependent DNA ligase	5	EC		-	-	12.6
8269	DNA ligase	5	EC		-	-	5.9
25881	50S ribosomal protein L32e	5			-	-	28.6
10491	Transcription elongation factor NusA	5			-	-	7.5
26735	DNA polymerase IV	5	EC		-	-	46.4
9587	DNA polymerase IV	4	EC		-	-	0.0
2332	DNA ligase	4	EC		-	-	0.0
17509	UvrABC system protein C	4			-	-	0.0
124	Probable DNA-directed RNA polymerase	4	EC		-	-	16.0
26755	DNA ligase	4	EC		-	-	0.0
314	DNA polymerase I	4	EC		-	-	0.0
27373	DNA ligase	4	EC		-	-	48.4
19101	DNA repair protein, putative	4			-	-	5.3
9554	DNA polymerase IV	4	EC		-	-	0.0
1784	DNA polymerase	4	EC		-	-	6.2
24997	DNA ligase	4	EC		-	-	5.6
27385	UvrABC system protein C	4			-	-	54.5
4733	UvrABC system protein C	4			-	-	0.0
26914	DNA ligase	4	EC		-	-	53.8
4378	DNA ligase	4	EC		-	-	5.1
15964	DNA repair and recombination protein RadA	4			-	-	0.0
26201	DNA ligase 1	4	EC		-	-	0.0
6929	DNA ligase	4	EC		-	-	0.0
25530	DNA repair and recombination protein RadA	4			-	-	0.0
2242	DNA ligase	3	EC		-	-	0.0
13068	DNA polymerase IV	3	EC		-	-	0.0
25764	DNA ligase	3	EC		-	-	32.9
22580	Halomucin	3			-	-	9.1
2063	DNA ligase	3	EC		-	-	11.8
25387	DNA repair and recombination protein RadA	3			-	-	19.0
19705	Halomucin	3			-	-	14.0
25719	DNA ligase 1	2	EC		-	-	35.1
3692	DNA ligase	2	EC		-	-	9.2
26897	DNA ligase	2	EC		-	-	45.8
7889	Holliday junction ATP-dependent DNA helicase RuvA	2	EC		-	-	0.0
3637	DNA transformation protein TfoX	2			-	-	10.1
26702	UvrABC system protein C	2			-	-	39.3
22940	Halomucin	2			-	-	10.0
1968	DNA ligase	2	EC		-	-	0.0
6050	DNA polymerase IV 1	2	EC		-	-	14.1
10951	DNA ligase	2	EC		-	-	10.7
25005	DNA ligase	2	EC		-	-	20.1
6765	DNA ligase	2	EC		-	-	0.0
52	Probable DNA-directed RNA polymerase	2	EC		-	-	6.0
27377	DNA polymerase eta	2	EC		-	-	47.8
4726	DNA ligase	2	EC		-	-	1.5
25539	DNA ligase	2	EC		-	-	25.4
25640	Holliday junction ATP-dependent DNA helicase RuvA	2	EC		-	-	0.0
9559	Exonuclease 1	2			-	-	10.1
26741	DNA ligase	2	EC		-	-	46.7
2152	DNA ligase	2	EC		-	-	3.0
3911	DNA ligase	2	EC		-	-	0.0
2187	DNA LIGASE POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]	2	EC		-	-	9.5
2136	Holliday junction ATP-dependent DNA helicase RuvA	2	EC		-	-	3.3
22758	DNA-directed RNA polymerase subunit beta'	2	EC		-	-	0.0
25679	DNA ligase	2	EC		-	-	0.0
88	Probable DNA-directed RNA polymerase	2	EC		-	-	6.0
25777	DNA polymerase IV	2	EC		-	-	39.6
25710	DNA ligase	1	EC		-	-	0.0
2648	Mitomycin resistance protein McrB	1			-	-	0.0
9528	DNA ligase	1	EC		-	-	0.0
5109	DNA ligase	1	EC		-	-	0.0
15980	DNA repair and recombination protein RadA	1			-	-	0.0
25548	DNA ligase	1	EC		-	-	0.0
20949	DNA polymerase type-X family protein pol4	1	EC		-	-	0.0
1907	DNA ligase	1	EC		-	-	0.0
6015	Holliday junction ATP-dependent DNA helicase RuvA	1	EC		-	-	0.0
26671	Holliday junction ATP-dependent DNA helicase RuvA	1	EC		-	-	0.0
26736	DNA ligase	1	EC		-	-	0.0
10967	Excision repair cross-complementing rodent repair deficiency, complementation group 4	1			-	-	0.0
6011	DNA polymerase IV	1	EC		-	-	0.0
9586	DNA repair and recombination protein RadA	1			-	-	0.0
27282	DNA ligase B	1	EC		-	-	0.0
20241	DNA ligase	1	EC		-	-	0.0
25054	DNA ligase	1	EC		-	-	0.0
22436	UvrABC system protein C	1			-	-	0.0
2111	DNA ligase	1	EC		-	-	0.0
18476	DNA repair protein UVH3	1			-	-	0.0