PDB 5flx

PDB Information

PDB5FLX
MethodELECTRON MICROSCOPY
Host OrganismORYCTOLAGUS CUNICULUS
Gene SourceHEPATITIS C VIRUS
Primary Citation
Molecular Architecture of the Ribosome-Bound Hepatitis C Virus Internal Ribosomal Entry Site RNA.
Yamamoto, H., Collier, M., Loerke, J., Ismer, J., Schmidt, A., Hilal, T., Sprink, T., Yamamoto, K., Mielke, T., Burger, J., Shaikh, T.R., Dabrowski, M., Hildebrand, P.W., Scheerer, P., Spahn, C.M.
Embo J.
HeaderRibosome
Released2015-10-28
Resolution3.900
CATH Insert Date10 Jan, 2016

PDB Images (78)

PDB Prints

PDB Chains (35)

Chain ID Date inserted into CATH CATH Status
1 11 Jan, 2016 Rejected
a 11 Jan, 2016 Chopped
A 11 Jan, 2016 Chopped
b 11 Jan, 2016 Chopped
B 11 Jan, 2016 Chopped
c 11 Jan, 2016 Chopped
C 11 Jan, 2016 Chopped
d 11 Jan, 2016 Chopped
D 11 Jan, 2016 Chopped
e 11 Jan, 2016 Holding pen
E 11 Jan, 2016 Chopped
f 11 Jan, 2016 Chopped
F 11 Jan, 2016 Chopped
g 11 Jan, 2016 Chopped
G 11 Jan, 2016 Chopped
H 11 Jan, 2016 Chopped
I 11 Jan, 2016 Chopped
J 11 Jan, 2016 Chopped
K 11 Jan, 2016 Chopped
L 11 Jan, 2016 Chopped
M 11 Jan, 2016 Chopped
N 11 Jan, 2016 Chopped
O 11 Jan, 2016 Chopped
P 11 Jan, 2016 Chopped
Q 11 Jan, 2016 Chopped
R 11 Jan, 2016 Chopped
S 11 Jan, 2016 Chopped
T 11 Jan, 2016 Chopped
U 11 Jan, 2016 Chopped
V 11 Jan, 2016 Chopped
W 11 Jan, 2016 Chopped
X 11 Jan, 2016 Chopped
Y 11 Jan, 2016 Chopped
z 11 Jan, 2016 Rejected
Z 11 Jan, 2016 Chopped

CATH Domains (42)

Domain ID Date inserted into CATH Superfamily CATH Status
5flxa00 13 Jan, 2016 3.30.1740.20 Assigned
5flxA01 13 Jan, 2016 3.40.50.10490 Assigned
5flxb00 13 Jan, 2016 2.20.25.100 Assigned
5flxB01 30 Nov, 2016 Holding pen
5flxc00 13 Jan, 2016 2.40.50.140 Assigned
5flxC01 13 Jan, 2016 3.30.160.20 Assigned
5flxC02 13 Jan, 2016 3.30.230.10 Assigned
5flxd00 13 Jan, 2016 4.10.830.10 Assigned
5flxD01 15 Jun, 2016 3.30.300.20 Assigned
5flxD02 15 Jun, 2016 3.30.1140.32 Assigned
5flxE01 13 Jan, 2016 3.10.290.10 Assigned
5flxE02 13 Jan, 2016 2.40.50.740 Assigned
5flxE03 13 Jan, 2016 2.30.30.30 Assigned
5flxf00 13 Jan, 2016 6.20.50.150 Assigned
5flxF00 13 Jan, 2016 1.10.455.10 Assigned
5flxg01 13 Jan, 2016 2.130.10.10 Assigned
5flxG01 13 Jan, 2016 Holding pen
5flxG02 13 Jan, 2016 1.20.5.2650 Assigned
5flxH00 13 Jan, 2016 Holding pen
5flxI01 15 Jun, 2016 Holding pen
5flxI02 15 Jun, 2016 Holding pen
5flxI03 15 Jun, 2016 1.10.168.20 Assigned
5flxJ01 13 Jan, 2016 Holding pen
5flxK00 13 Jan, 2016 1.10.10.10 Assigned
5flxL00 13 Jan, 2016 2.40.50.1000 Assigned
5flxM00 13 Jan, 2016 3.30.1330.30 Assigned
5flxN01 13 Jan, 2016 Holding pen
5flxN02 13 Jan, 2016 1.10.287.10 Assigned
5flxO00 13 Jan, 2016 3.30.420.80 Assigned
5flxP00 13 Jan, 2016 Holding pen
5flxQ00 13 Jan, 2016 3.30.230.10 Assigned
5flxR01 13 Jan, 2016 1.10.60.20 Assigned
5flxS01 13 Jan, 2016 1.10.8.50 Assigned
5flxS02 13 Jan, 2016 Holding pen
5flxT00 13 Jan, 2016 Holding pen
5flxU00 13 Jan, 2016 3.30.70.600 Assigned
5flxV00 13 Jan, 2016 3.30.1230.20 Assigned
5flxW01 13 Jan, 2016 3.30.1370.30 Assigned
5flxW02 13 Jan, 2016 3.30.1490.10 Assigned
5flxX00 13 Jan, 2016 Holding pen
5flxY00 13 Jan, 2016 3.30.70.3370 Assigned
5flxZ00 13 Jan, 2016 1.10.10.10 Assigned

UniProtKB Entries (30)

Accession Gene ID Taxon Description
P23396 RS3_HUMAN Homo sapiens 40S ribosomal protein S3
P62847 RS24_HUMAN Homo sapiens 40S ribosomal protein S24
P62857 RS28_HUMAN Homo sapiens 40S ribosomal protein S28
P62841 RS15_HUMAN Homo sapiens 40S ribosomal protein S15
P46783 RS10_HUMAN Homo sapiens 40S ribosomal protein S10
P08708 RS17_HUMAN Homo sapiens 40S ribosomal protein S17
P62753 RS6_HUMAN Homo sapiens 40S ribosomal protein S6
P39019 RS19_HUMAN Homo sapiens 40S ribosomal protein S19
P60866 RS20_HUMAN Homo sapiens 40S ribosomal protein S20
P08865 RSSA_HUMAN Homo sapiens 40S ribosomal protein SA
P42677 RS27_HUMAN Homo sapiens 40S ribosomal protein S27
P63244 RACK1_HUMAN Homo sapiens Receptor of activated protein C kinase 1
P46782 RS5_HUMAN Homo sapiens 40S ribosomal protein S5
P62266 RS23_HUMAN Homo sapiens 40S ribosomal protein S23
P22090 RS4Y1_HUMAN Homo sapiens 40S ribosomal protein S4, Y isoform 1
P62269 RS18_HUMAN Homo sapiens 40S ribosomal protein S18
P46781 RS9_HUMAN Homo sapiens 40S ribosomal protein S9
P62854 RS26_HUMAN Homo sapiens 40S ribosomal protein S26
P62851 RS25_HUMAN Homo sapiens 40S ribosomal protein S25
P62249 RS16_HUMAN Homo sapiens 40S ribosomal protein S16
P62979 RS27A_HUMAN Homo sapiens Ubiquitin-40S ribosomal protein S27a
P62244 RS15A_HUMAN Homo sapiens 40S ribosomal protein S15a
P62273 RS29_HUMAN Homo sapiens 40S ribosomal protein S29
P62277 RS13_HUMAN Homo sapiens 40S ribosomal protein S13
P63220 RS21_HUMAN Homo sapiens 40S ribosomal protein S21
P62241 RS8_HUMAN Homo sapiens 40S ribosomal protein S8
P62280 RS11_HUMAN Homo sapiens 40S ribosomal protein S11
P25398 RS12_HUMAN Homo sapiens 40S ribosomal protein S12
P62263 RS14_HUMAN Homo sapiens 40S ribosomal protein S14
P15880 RS2_HUMAN Homo sapiens 40S ribosomal protein S2