PDB 5flx

PDB Links
Overview

PDB Information

PDB	5FLX
Method	ELECTRON MICROSCOPY
Host Organism	ORYCTOLAGUS CUNICULUS
Gene Source	HEPATITIS C VIRUS
Primary Citation	Molecular Architecture of the Ribosome-Bound Hepatitis C Virus Internal Ribosomal Entry Site RNA. Yamamoto, H., Collier, M., Loerke, J., Ismer, J., Schmidt, A., Hilal, T., Sprink, T., Yamamoto, K., Mielke, T., Burger, J., Shaikh, T.R., Dabrowski, M., Hildebrand, P.W., Scheerer, P., Spahn, C.M. Embo J.
Header	Ribosome
Released	2015-10-28
Resolution	3.900
CATH Insert Date	10 Jan, 2016

PDB Images (78)

5flx

PDB 5flx

5flx1

PDB Chain 5flx1

5flxa

PDB Chain 5flxa

5flxA

PDB Chain 5flxA

5flxb

PDB Chain 5flxb

5flxB

PDB Chain 5flxB

5flxc

PDB Chain 5flxc

5flxC

PDB Chain 5flxC

5flxd

PDB Chain 5flxd

5flxD

PDB Chain 5flxD

5flxe

PDB Chain 5flxe

5flxE

PDB Chain 5flxE

5flxf

PDB Chain 5flxf

5flxF

PDB Chain 5flxF

5flxg

PDB Chain 5flxg

5flxG

PDB Chain 5flxG

5flxH

PDB Chain 5flxH

5flxI

PDB Chain 5flxI

5flxJ

PDB Chain 5flxJ

5flxK

PDB Chain 5flxK

5flxL

PDB Chain 5flxL

5flxM

PDB Chain 5flxM

5flxN

PDB Chain 5flxN

5flxO

PDB Chain 5flxO

5flxP

PDB Chain 5flxP

5flxQ

PDB Chain 5flxQ

5flxR

PDB Chain 5flxR

5flxS

PDB Chain 5flxS

5flxT

PDB Chain 5flxT

5flxU

PDB Chain 5flxU

5flxV

PDB Chain 5flxV

5flxW

PDB Chain 5flxW

5flxX

PDB Chain 5flxX

5flxY

PDB Chain 5flxY

5flxz

PDB Chain 5flxz

5flxZ

PDB Chain 5flxZ

5flxa00

CATH Domain 5flxa00

5flxA01

CATH Domain 5flxA01

5flxb00

CATH Domain 5flxb00

5flxB01

CATH Domain 5flxB01

5flxc00

CATH Domain 5flxc00

5flxC01

CATH Domain 5flxC01

5flxC02

CATH Domain 5flxC02

5flxd00

CATH Domain 5flxd00

5flxD01

CATH Domain 5flxD01

5flxD02

CATH Domain 5flxD02

5flxE01

CATH Domain 5flxE01

5flxE02

CATH Domain 5flxE02

5flxE03

CATH Domain 5flxE03

5flxf00

CATH Domain 5flxf00

5flxF00

CATH Domain 5flxF00

5flxg01

CATH Domain 5flxg01

5flxG01

CATH Domain 5flxG01

5flxG02

CATH Domain 5flxG02

5flxH00

CATH Domain 5flxH00

5flxI01

CATH Domain 5flxI01

5flxI02

CATH Domain 5flxI02

5flxI03

CATH Domain 5flxI03

5flxJ01

CATH Domain 5flxJ01

5flxK00

CATH Domain 5flxK00

5flxL00

CATH Domain 5flxL00

5flxM00

CATH Domain 5flxM00

5flxN01

CATH Domain 5flxN01

5flxN02

CATH Domain 5flxN02

5flxO00

CATH Domain 5flxO00

5flxP00

CATH Domain 5flxP00

5flxQ00

CATH Domain 5flxQ00

5flxR01

CATH Domain 5flxR01

5flxS01

CATH Domain 5flxS01

5flxS02

CATH Domain 5flxS02

5flxT00

CATH Domain 5flxT00

5flxU00

CATH Domain 5flxU00

5flxV00

CATH Domain 5flxV00

5flxW01

CATH Domain 5flxW01

5flxW02

CATH Domain 5flxW02

5flxX00

CATH Domain 5flxX00

5flxY00

CATH Domain 5flxY00

5flxZ00

CATH Domain 5flxZ00

PDB Prints

PDB Chains (35)

Chain ID	Date inserted into CATH	CATH Status
1	11 Jan, 2016	Rejected
a	11 Jan, 2016	Chopped
A	11 Jan, 2016	Chopped
b	11 Jan, 2016	Chopped
B	11 Jan, 2016	Chopped
c	11 Jan, 2016	Chopped
C	11 Jan, 2016	Chopped
d	11 Jan, 2016	Chopped
D	11 Jan, 2016	Chopped
e	11 Jan, 2016	Holding pen
E	11 Jan, 2016	Chopped
f	11 Jan, 2016	Chopped
F	11 Jan, 2016	Chopped
g	11 Jan, 2016	Chopped
G	11 Jan, 2016	Chopped
H	11 Jan, 2016	Chopped
I	11 Jan, 2016	Chopped
J	11 Jan, 2016	Chopped
K	11 Jan, 2016	Chopped
L	11 Jan, 2016	Chopped
M	11 Jan, 2016	Chopped
N	11 Jan, 2016	Chopped
O	11 Jan, 2016	Chopped
P	11 Jan, 2016	Chopped
Q	11 Jan, 2016	Chopped
R	11 Jan, 2016	Chopped
S	11 Jan, 2016	Chopped
T	11 Jan, 2016	Chopped
U	11 Jan, 2016	Chopped
V	11 Jan, 2016	Chopped
W	11 Jan, 2016	Chopped
X	11 Jan, 2016	Chopped
Y	11 Jan, 2016	Chopped
z	11 Jan, 2016	Rejected
Z	11 Jan, 2016	Chopped

CATH Domains (42)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5flxa00	13 Jan, 2016	3.30.1740.20	Assigned
5flxA01	13 Jan, 2016	3.40.50.10490	Assigned
5flxb00	13 Jan, 2016	2.20.25.100	Assigned
5flxB01	30 Nov, 2016		Holding pen
5flxc00	13 Jan, 2016	2.40.50.140	Assigned
5flxC01	13 Jan, 2016	3.30.160.20	Assigned
5flxC02	13 Jan, 2016	3.30.230.10	Assigned
5flxd00	13 Jan, 2016	4.10.830.10	Assigned
5flxD01	15 Jun, 2016	3.30.300.20	Assigned
5flxD02	15 Jun, 2016	3.30.1140.32	Assigned
5flxE01	13 Jan, 2016	3.10.290.10	Assigned
5flxE02	13 Jan, 2016	2.40.50.740	Assigned
5flxE03	13 Jan, 2016	2.30.30.30	Assigned
5flxf00	13 Jan, 2016	6.20.50.150	Assigned
5flxF00	13 Jan, 2016	1.10.455.10	Assigned
5flxg01	13 Jan, 2016	2.130.10.10	Assigned
5flxG01	13 Jan, 2016		Holding pen
5flxG02	13 Jan, 2016	1.20.5.2650	Assigned
5flxH00	13 Jan, 2016		Holding pen
5flxI01	15 Jun, 2016		Holding pen
5flxI02	15 Jun, 2016		Holding pen
5flxI03	15 Jun, 2016	1.10.168.20	Assigned
5flxJ01	13 Jan, 2016		Holding pen
5flxK00	13 Jan, 2016	1.10.10.10	Assigned
5flxL00	13 Jan, 2016	2.40.50.1000	Assigned
5flxM00	13 Jan, 2016	3.30.1330.30	Assigned
5flxN01	13 Jan, 2016		Holding pen
5flxN02	13 Jan, 2016	1.10.287.10	Assigned
5flxO00	13 Jan, 2016	3.30.420.80	Assigned
5flxP00	13 Jan, 2016		Holding pen
5flxQ00	13 Jan, 2016	3.30.230.10	Assigned
5flxR01	13 Jan, 2016	1.10.60.20	Assigned
5flxS01	13 Jan, 2016	1.10.8.50	Assigned
5flxS02	13 Jan, 2016		Holding pen
5flxT00	13 Jan, 2016		Holding pen
5flxU00	13 Jan, 2016	3.30.70.600	Assigned
5flxV00	13 Jan, 2016	3.30.1230.20	Assigned
5flxW01	13 Jan, 2016	3.30.1370.30	Assigned
5flxW02	13 Jan, 2016	3.30.1490.10	Assigned
5flxX00	13 Jan, 2016		Holding pen
5flxY00	13 Jan, 2016	3.30.70.3370	Assigned
5flxZ00	13 Jan, 2016	1.10.10.10	Assigned

UniProtKB Entries (30)

Accession	Gene ID	Taxon	Description
P25398	RS12_HUMAN	Homo sapiens	40S ribosomal protein S12
P46781	RS9_HUMAN	Homo sapiens	40S ribosomal protein S9
P62854	RS26_HUMAN	Homo sapiens	40S ribosomal protein S26
P62851	RS25_HUMAN	Homo sapiens	40S ribosomal protein S25
P08865	RSSA_HUMAN	Homo sapiens	40S ribosomal protein SA
P62269	RS18_HUMAN	Homo sapiens	40S ribosomal protein S18
P23396	RS3_HUMAN	Homo sapiens	40S ribosomal protein S3
P42677	RS27_HUMAN	Homo sapiens	40S ribosomal protein S27
P63220	RS21_HUMAN	Homo sapiens	40S ribosomal protein S21
P62857	RS28_HUMAN	Homo sapiens	40S ribosomal protein S28
P62841	RS15_HUMAN	Homo sapiens	40S ribosomal protein S15
P62263	RS14_HUMAN	Homo sapiens	40S ribosomal protein S14
P39019	RS19_HUMAN	Homo sapiens	40S ribosomal protein S19
P63244	RACK1_HUMAN	Homo sapiens	Receptor of activated protein C kinase 1
P62277	RS13_HUMAN	Homo sapiens	40S ribosomal protein S13
P15880	RS2_HUMAN	Homo sapiens	40S ribosomal protein S2
P46782	RS5_HUMAN	Homo sapiens	40S ribosomal protein S5
P62273	RS29_HUMAN	Homo sapiens	40S ribosomal protein S29
P62249	RS16_HUMAN	Homo sapiens	40S ribosomal protein S16
P60866	RS20_HUMAN	Homo sapiens	40S ribosomal protein S20
P62241	RS8_HUMAN	Homo sapiens	40S ribosomal protein S8
P46783	RS10_HUMAN	Homo sapiens	40S ribosomal protein S10
P62266	RS23_HUMAN	Homo sapiens	40S ribosomal protein S23
P22090	RS4Y1_HUMAN	Homo sapiens	40S ribosomal protein S4, Y isoform 1
P08708	RS17_HUMAN	Homo sapiens	40S ribosomal protein S17
P62280	RS11_HUMAN	Homo sapiens	40S ribosomal protein S11
P62244	RS15A_HUMAN	Homo sapiens	40S ribosomal protein S15a
P62753	RS6_HUMAN	Homo sapiens	40S ribosomal protein S6
P62979	RS27A_HUMAN	Homo sapiens	Ubiquitin-40S ribosomal protein S27a
P62847	RS24_HUMAN	Homo sapiens	40S ribosomal protein S24