The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 2: Nuclear pore complex protein

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 1 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Structural constituent of nuclear pore GO:0017056
The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules.
12 A1YK54 (/ISS) A1YK55 (/ISS) A1YK56 (/ISS) A1YK57 (/ISS) A1YK58 (/ISS) A1YK59 (/ISS) A1YK60 (/ISS) A1YK61 (/ISS) A1YK62 (/ISS) A1YK63 (/ISS)
(2 more)

There are 10 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Double-strand break repair via homologous recombination GO:0000724
The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.
12 A1YK54 (/IMP) A1YK55 (/IMP) A1YK56 (/IMP) A1YK57 (/IMP) A1YK58 (/IMP) A1YK59 (/IMP) A1YK60 (/IMP) A1YK61 (/IMP) A1YK62 (/IMP) A1YK63 (/IMP)
(2 more)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
12 A1YK54 (/ISS) A1YK55 (/ISS) A1YK56 (/ISS) A1YK57 (/ISS) A1YK58 (/ISS) A1YK59 (/ISS) A1YK60 (/ISS) A1YK61 (/ISS) A1YK62 (/ISS) A1YK63 (/ISS)
(2 more)
Protein import into nucleus GO:0006606
The directed movement of a protein from the cytoplasm to the nucleus.
12 A1YK54 (/IMP) A1YK55 (/IMP) A1YK56 (/IMP) A1YK57 (/IMP) A1YK58 (/IMP) A1YK59 (/IMP) A1YK60 (/IMP) A1YK61 (/IMP) A1YK62 (/IMP) A1YK63 (/IMP)
(2 more)
Meiosis I cytokinesis GO:0007110
A cell cycle process that results in the division of the cytoplasm of a cell after meiosis I, resulting in the separation of the original cell into two daughter cells.
1 Q9V466 (/IMP)
Male meiosis cytokinesis GO:0007112
A cell cycle process that occurs as part of the male meiotic cell cycle and results in the division of the cytoplasm of a cell to produce two daughter cells.
1 Q9V466 (/IMP)
Female gonad development GO:0008585
The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure.
1 Q9V466 (/IMP)
Eggshell formation GO:0030703
Construction of the eggshell, a product of the somatic follicle cell epithelium and a structure that supports the egg in a hostile environment, minimizing water loss whilst allowing gas exchanges essential for embryonic respiration.
1 Q9V466 (/IMP)
Regulation of nucleocytoplasmic transport GO:0046822
Any process that modulates the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.
1 Q9V466 (/IMP)
Spermatocyte division GO:0048137
The meiotic divisions undergone by the primary and secondary spermatocytes to produce haploid spermatids.
1 Q9V466 (/IMP)
Positive regulation of protein localization to nucleus GO:1900182
Any process that activates or increases the frequency, rate or extent of protein localization to nucleus.
1 Q9V466 (/IMP)

There are 2 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
12 A1YK54 (/IDA) A1YK55 (/IDA) A1YK56 (/IDA) A1YK57 (/IDA) A1YK58 (/IDA) A1YK59 (/IDA) A1YK60 (/IDA) A1YK61 (/IDA) A1YK62 (/IDA) A1YK63 (/IDA)
(2 more)
Nuclear pore outer ring GO:0031080
A subcomplex of the nuclear pore complex (NPC) that forms the outer rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two outer rings each contain multiple copies of the following proteins: Nup133p, Nup120p, Nup145Cp, Nup85p, Nup84p, Seh1p, and Sec13p. In vertebrates, the two outer rings each contain multiple copies of the following proteins: Nup133, Nup160, Nup96, Nup75, Nup107, Seh1, Sec13, Nup43, Nup37, and ALADIN. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup84 complex (S. cerevisiae) or the Nup107-160 complex (vertebrates).
12 A1YK54 (/ISS) A1YK55 (/ISS) A1YK56 (/ISS) A1YK57 (/ISS) A1YK58 (/ISS) A1YK59 (/ISS) A1YK60 (/ISS) A1YK61 (/ISS) A1YK62 (/ISS) A1YK63 (/ISS)
(2 more)
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