The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Penicillin-binding protein 2a (Domain 2)
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: Peptidoglycan D,D-transpeptidase MrdA

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 7 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Drug binding GO:0008144
Interacting selectively and non-covalently with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
159 P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA)
(149 more)
Penicillin binding GO:0008658
Interacting selectively and non-covalently with penicillin, any antibiotic that contains the condensed beta-lactamthiazolidine ring system.
159 P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP)
(149 more)
Serine-type D-Ala-D-Ala carboxypeptidase activity GO:0009002
Catalysis of the reaction: (Ac)2-L-Lys-D-alanyl-D-alanine + H2O = (Ac)2-L-Lys-D-alanine + D-alanine.
159 P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA)
(149 more)
Serine-type D-Ala-D-Ala carboxypeptidase activity GO:0009002
Catalysis of the reaction: (Ac)2-L-Lys-D-alanyl-D-alanine + H2O = (Ac)2-L-Lys-D-alanine + D-alanine.
159 P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP)
(149 more)
Peptidoglycan L,D-transpeptidase activity GO:0071972
Catalysis of the reaction: 2 a peptidoglycan dimer (tetrapeptide) + 3 H2O = a peptidoglycan tetramer with L,D cross-links (L-Lys-D-Asn-L-Lys) + di-trans,poly-cis-undecaprenyl diphosphate + 4 D-alanine.
159 P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA)
(149 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
15 G3XCV7 (/IPI) G3XCV7 (/IPI) G3XCV7 (/IPI) G3XCV7 (/IPI) G3XCV7 (/IPI) G3XCV7 (/IPI) G3XCV7 (/IPI) G3XCV7 (/IPI) G3XCV7 (/IPI) G3XCV7 (/IPI)
(5 more)
Catalytic activity GO:0003824
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
8 Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS)

There are 6 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Regulation of cell shape GO:0008360
Any process that modulates the surface configuration of a cell.
159 P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP)
(149 more)
Peptidoglycan biosynthetic process GO:0009252
The chemical reactions and pathways resulting in the formation of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.
159 P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP)
(149 more)
Response to drug GO:0042493
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
159 P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA)
(149 more)
Response to antibiotic GO:0046677
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
159 P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP)
(149 more)
Cell wall organization GO:0071555
A process that results in the assembly, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.
159 P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP) P0AD65 (/IMP)
(149 more)
Peptidoglycan biosynthetic process GO:0009252
The chemical reactions and pathways resulting in the formation of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.
8 Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS) Q9KTF2 (/ISS)

There are 1 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
159 P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA) P0AD65 (/IDA)
(149 more)