The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Mannitol-specific EII; Chain A
".
Sunburst
Table| Division | Species | Genes |
|---|---|---|
| Bacteria | Shigella flexneri CDC 796-83 | 3 |
| Bacteria | [Clostridium] bolteae 90A9 | 11 |
| Bacteria | Jiangella alba | 1 |
| Bacteria | Castellaniella defragrans 65Phen | 1 |
| Bacteria | Escherichia coli 113290 | 4 |
| Vertebrates | Labrus bergylta | 45 |
| Bacteria | candidate division KSB3 bacterium | 6 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 | 9 |
| Bacteria | Gemmatimonadaceae bacterium | 4 |
| Bacteria | Dorea sp. 42_8 | 1 |
| Invertebrates | Agrilus planipennis | 5 |
| Primates | Macaca nemestrina | 43 |
| Invertebrates | Pristionchus pacificus | 8 |
| Bacteria | Enterococcus faecium 1,231,501 | 3 |
| Bacteria | Desmospora activa DSM 45169 | 7 |
| Bacteria | Leptotrichia sp. oral taxon 879 str. F0557 | 2 |
| Bacteria | Streptomyces incarnatus | 2 |
| Rodents | Cavia porcellus | 20 |
| Bacteria | Cellvibrio mixtus | 1 |
| Bacteria | Lachnospiraceae bacterium 3-1 | 3 |
| Bacteria | Paraburkholderia phenazinium | 6 |
| Bacteria | Variovorax paradoxus | 3 |
| Bacteria | Providencia alcalifaciens F90-2004 | 1 |
| Bacteria | Desulfosporosinus sp. I2 | 2 |
| Bacteria | Faecalibacterium sp. OM04-11BH | 3 |
| Bacteria | Streptomyces curacoi | 2 |
| Bacteria | Bacillus cereus | 18 |
| Bacteria | Granulicatella adiacens ATCC 49175 | 9 |
| Bacteria | Lactobacillus rhamnosus MTCC 5462 | 7 |
| Bacteria | Pseudomonas sp. GV071 | 1 |
| Bacteria | Propionispora vibrioides | 45 |
| Bacteria | Marinilactibacillus psychrotolerans | 8 |
| Bacteria | Enterococcus faecium EnGen0003 | 1 |
| Bacteria | Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 | 1 |
| Bacteria | Mycoplasma mycoides subsp. mycoides SC | 1 |
| Bacteria | Sebaldella termitidis ATCC 33386 | 46 |
| Bacteria | Brachyspira sp. G79 | 1 |
| Bacteria | Rhodococcus sp. 14-2470-1a | 1 |
| Bacteria | Pseudoalteromonas sp. BMB | 1 |
| Bacteria | Pseudomonas aeruginosa | 5 |
| Bacteria | Eremococcus coleocola ACS-139-V-Col8 | 2 |
| Bacteria | Paenibacillus sp. OK003 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Anatum | 5 |
| Bacteria | Lactococcus sp. DD01 | 5 |
| Bacteria | Cronobacter condimenti 1330 | 2 |
| Bacteria | Lactobacillus coryniformis subsp. coryniformis CECT 5711 | 6 |
| Bacteria | Streptomyces griseoaurantiacus M045 | 1 |
| Bacteria | Erythrobacteraceae bacterium HL-111 | 1 |
| Bacteria | SAR116 cluster bacterium MED-G04 | 1 |
| Bacteria | Chlamydia psittaci 10_743_SC13 | 1 |
| Bacteria | Sphingomonas sp. WZY 27 | 1 |
| Bacteria | Rhizobium leguminosarum bv. trifolii WSM2304 | 2 |
| Bacteria | Sulfitobacter pseudonitzschiae | 2 |
| Bacteria | Streptococcus bovimastitidis | 12 |
| Bacteria | Clostridioides difficile | 51 |
| Bacteria | Candidatus Cloacimonetes bacterium ADurb.Bin088 | 4 |
| Mammals | Leptonychotes weddellii | 12 |
| Vertebrates | Xiphophorus couchianus | 37 |
| Bacteria | Desulfococcus sp. 4484_241 | 2 |
| Bacteria | Candidatus Hydrogenedentes bacterium ADurb.Bin179 | 4 |
| Bacteria | Pseudomonas amygdali pv. lachrymans str. M302278 | 1 |
| Bacteria | Stigmatella aurantiaca DW4/3-1 | 5 |
| Environmental samples | Blautia hydrogenotrophica CAG:147 | 3 |
| Bacteria | bacterium DOLJORAL78_65_58 | 1 |
| Bacteria | Erysipelothrix larvae | 15 |
| Bacteria | Gordonia sp. MMS17-SY073 | 1 |
| Bacteria | Listeria monocytogenes EGD | 13 |
| Bacteria | Paracoccus lutimaris | 1 |
| Bacteria | Pokkaliibacter plantistimulans | 1 |
| Bacteria | Vibrio anguillarum 775 | 5 |
| Bacteria | Halanaerobium sp. T82-1 | 8 |
| Bacteria | Pseudomonas mendocina | 2 |
| Bacteria | Nocardioides lianchengensis | 2 |
| Vertebrates | Poeciliopsis prolifica | 29 |
| Bacteria | Enterococcus faecium E1679 | 6 |
| Bacteria | Micropruina glycogenica | 3 |
| Bacteria | Pseudomonas psychrotolerans | 1 |
| Bacteria | Croceicoccus marinus | 1 |
| Bacteria | Brevundimonas abyssalis TAR-001 | 1 |
| Bacteria | Vibrio campbellii | 6 |
| Bacteria | Escherichia coli O174:H8 str. 04-3038 | 5 |
| Bacteria | Escherichia coli KTE108 | 4 |
| Bacteria | Chloroflexi bacterium RBG_16_54_18 | 2 |
| Bacteria | Halothermothrix orenii H 168 | 1 |
| Vertebrates | Cathartes aura | 1 |
| Bacteria | bacteria symbiont BFo1 of Frankliniella occidentalis | 8 |
| Bacteria | bacterium HR09 | 2 |
| Bacteria | Carnobacterium sp. 17-4 | 17 |
| Bacteria | Tropicibacter phthalicicus | 1 |
| Bacteria | Lactobacillus bifermentans DSM 20003 | 7 |
| Bacteria | Xanthomonas hyacinthi DSM 19077 | 2 |
| Bacteria | Escherichia sp. KTE52 | 1 |
| Bacteria | Gilliamella bombicola | 4 |
| Bacteria | Truepera radiovictrix DSM 17093 | 1 |
| Bacteria | Verrucomicrobiales bacterium | 15 |
| Bacteria | Alteromonas australica | 1 |
| Bacteria | beta proteobacterium AAP99 | 1 |
| Bacteria | Salmonella enterica subsp. salamae | 4 |
| Bacteria | Dorea sp. OM02-2LB | 10 |
| Bacteria | Firmicutes bacterium M10-2 | 12 |
| Bacteria | Lactobacillus dextrinicus DSM 20335 | 2 |
| Invertebrates | Drosophila ficusphila | 24 |
| Bacteria | Pseudoruegeria lutimaris | 2 |
| Bacteria | Carnobacterium viridans | 4 |
| Bacteria | Poseidonocella sedimentorum | 1 |
| Bacteria | Escherichia coli 3-373-03_S4_C2 | 7 |
| Bacteria | Mesorhizobium ciceri | 1 |
| Bacteria | Listeria rocourtiae FSL F6-920 | 12 |
| Bacteria | Lactobacillus bombi | 4 |
| Bacteria | Tepidimonas fonticaldi | 1 |
| Bacteria | Nitrospinae bacterium RIFCSPLOWO2_02_39_17 | 1 |
| Bacteria | Lysobacter defluvii IMMIB APB-9 = DSM 18482 | 1 |
| Bacteria | Streptococcus pseudopneumoniae 22725 | 1 |
| Bacteria | candidate division TA06 bacterium DG_78 | 3 |
| Mammals | Canis lupus familiaris | 15 |
| Bacteria | Salmonella enterica subsp. enterica | 45 |
| Bacteria | Novosphingobium pentaromativorans US6-1 | 2 |
| Bacteria | Enterobacter sp. kpr-6 | 8 |
| Invertebrates | Drosophila yakuba | 26 |
| Invertebrates | Ornithodoros erraticus | 5 |
| Bacteria | Bacillus taeanensis | 13 |
| Bacteria | Thalassomonas actiniarum | 1 |
| Bacteria | Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 | 1 |
| Bacteria | Candidatus Cloacimonetes bacterium ADurb.Bin211 | 3 |
| Bacteria | [Clostridium] citroniae WAL-17108 | 10 |
| Bacteria | Corynebacterium frankenforstense DSM 45800 | 2 |
| Bacteria | Enterobacteriaceae bacterium strain FGI 57 | 10 |
| Bacteria | Clostridioides difficile P28 | 28 |
| Bacteria | Olsenella sp. An285 | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001114 | 5 |
| Bacteria | Sphingopyxis alaskensis RB2256 | 1 |
| Bacteria | Novosphingobium sp. Rr 2-17 | 2 |
| Bacteria | Desulfovibrio vulgaris str. 'Miyazaki F' | 1 |
| Bacteria | Phenylobacterium sp. HYN0004 | 1 |
| Rodents | Mesocricetus auratus | 26 |
| Bacteria | Clostridium sp. D5 | 8 |
| Bacteria | Novosphingobium sp. AP12 | 2 |
| Bacteria | Sinorhizobium fredii USDA 205 | 2 |
| Bacteria | Streptomyces sp. CB00455 | 1 |
| Bacteria | bacterium ADurb.Bin157 | 4 |
| Invertebrates | Stegodyphus mimosarum | 4 |
| Bacteria | Enterobacter sp. BIGb0359 | 10 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.06.1.1 | 1 |
| Bacteria | Lachnospiraceae bacterium NE2001 | 1 |
| Bacteria | Mesorhizobium australicum | 2 |
| Bacteria | Pantoea ananatis | 5 |
| Bacteria | Klebsiella pneumoniae subsp. pneumoniae HS11286 | 12 |
| Bacteria | Leifsonia xyli subsp. xyli | 4 |
| Invertebrates | Strongyloides ratti | 4 |
| Bacteria | Endozoicomonas montiporae CL-33 | 3 |
| Bacteria | Facklamia hominis CCUG 36813 | 1 |
| Bacteria | Yersinia pestis Antiqua | 4 |
| Bacteria | Deltaproteobacteria bacterium ADurb.Bin151 | 1 |
| Bacteria | Lactobacillus mellifer | 11 |
| Bacteria | Paraphotobacterium marinum | 1 |
| Bacteria | Bibersteinia trehalosi | 1 |
| Bacteria | Fuerstia marisgermanicae | 4 |
| Bacteria | Veillonella atypica ACS-049-V-Sch6 | 1 |
| Bacteria | Snodgrassella sp. R-53583 | 1 |
| Vertebrates | Petromyzon marinus | 7 |
| Bacteria | Enterococcus canintestini | 13 |
| Bacteria | Listeria grayi DSM 20601 | 13 |
| Bacteria | Kocuria sp. SM24M-10 | 3 |
| Bacteria | Enterococcus sp. 2F9_DIV0599 | 2 |
| Bacteria | Nocardia otitidiscaviarum | 2 |
| Bacteria | Candidatus Thermochlorobacteriaceae bacterium GBChlB | 1 |
| Bacteria | Pseudoclavibacter sp. RFBA6 | 3 |
| Bacteria | Streptomyces rapamycinicus NRRL 5491 | 1 |
| Bacteria | Mycoplasma penetrans HF-2 | 6 |
| Bacteria | Veillonella sp. DORA_A_3_16_22 | 1 |
| Bacteria | Burkholderiaceae bacterium PBA | 1 |
| Bacteria | Cryobacterium levicorallinum | 2 |
| Bacteria | Lactobacillus vini DSM 20605 | 6 |
| Bacteria | Candidatus Woesearchaeota archaeon | 3 |
| Bacteria | Planococcus kocurii | 4 |
| Bacteria | Escherichia coli O127:H6 str. E2348/69 | 4 |
| Invertebrates | Trichuris suis | 8 |
| Bacteria | Spiroplasma litorale | 4 |
| Bacteria | Vibrio cholerae B33 | 8 |
| Bacteria | Bordetella sp. N | 1 |
| Environmental samples | human gut metagenome | 9 |
| Bacteria | Achromobacter piechaudii ATCC 43553 | 1 |
| Bacteria | Paenibacillus donghaensis | 5 |
| Invertebrates | Drosophila persimilis | 3 |
| Bacteria | Bacillus subtilis subsp. subtilis str. SC-8 | 1 |
| Bacteria | Mesorhizobium sp. | 7 |
| Bacteria | Anaerostipes sp. AF04-45 | 30 |
| Bacteria | Desulfobulbaceae bacterium A2 | 2 |
| Bacteria | Virgibacillus sp. 7505 | 3 |
| Invertebrates | Macrostomum lignano | 49 |
| Bacteria | Pseudomonas coronafaciens pv. coronafaciens | 1 |
| Bacteria | Microbacterium sp. SA39 | 2 |
| Bacteria | Rhodopirellula baltica SH 1 | 3 |
| Invertebrates | Capitella teleta | 9 |
| Bacteria | Streptomyces sp. MMG1121 | 2 |
| Bacteria | Bacillus sp. T33-2 | 7 |
| Bacteria | Nocardioides sp. Leaf285 | 2 |
| Bacteria | Lachnospiraceae bacterium oral taxon 082 str. F0431 | 1 |
| Bacteria | Bacillus simplex | 9 |
| Bacteria | Methylobacterium sp. yr668 | 1 |
| Invertebrates | Rhipicephalus appendiculatus | 1 |
| Bacteria | Lactobacillus nasuensis JCM 17158 | 6 |
| Bacteria | Clostridium pasteurianum BC1 | 7 |
| Bacteria | Oceanospirillum linum | 1 |
| Mammals | Tursiops truncatus | 15 |
| Bacteria | Enterococcus termitis | 24 |
| Rodents | Ictidomys tridecemlineatus | 27 |
| Bacteria | Shigella flexneri 2002017 | 7 |
| Bacteria | Pseudomonas coronafaciens pv. garcae | 1 |
| Invertebrates | Daphnia magna | 54 |
| Bacteria | Eoetvoesia caeni | 2 |
| Bacteria | Proteobacteria bacterium TMED72 | 1 |
| Bacteria | Xanthomonadales bacterium | 3 |
| Bacteria | Mesorhizobium japonicum | 1 |
| Bacteria | Pantoea wallisii | 5 |
| Bacteria | Betaproteobacteria bacterium SG8_41 | 1 |
| Bacteria | Microbacterium laevaniformans OR221 | 4 |
| Bacteria | Enterobacter sp. BIGb0383 | 11 |
| Bacteria | bacterium ADurb.Bin270 | 3 |
| Bacteria | Alphaproteobacteria bacterium TMED89 | 1 |
| Bacteria | Lysobacter daejeonensis GH1-9 | 1 |
| Bacteria | Providencia rustigianii DSM 4541 | 3 |
| Bacteria | Bacillaceae bacterium | 5 |
| Bacteria | Vibrio shilonii AK1 | 5 |
| Bacteria | Rhizobium sp. RSm-3 | 2 |
| Bacteria | Klebsiella pneumoniae 342 | 4 |
| Bacteria | [Enterobacter] lignolyticus SCF1 | 14 |
| Bacteria | Yersiniaceae bacterium 2016Iso3 | 10 |
| Vertebrates | Alligator mississippiensis | 22 |
| Bacteria | Alteromonas confluentis | 1 |
| Bacteria | Rhizorhabdus dicambivorans | 1 |
| Bacteria | Leptotrichia goodfellowii F0264 | 18 |
| Vertebrates | Pygocentrus nattereri | 42 |
| Invertebrates | Dinothrombium tinctorium | 4 |
| Bacteria | Erwinia sp. OLSSP12 | 6 |
| Bacteria | Desulfovibrio gracilis DSM 16080 | 1 |
| Bacteria | Enterococcus gilvus ATCC BAA-350 | 31 |
| Bacteria | Eubacterium barkeri | 5 |
| Bacteria | Pontibacillus marinus BH030004 = DSM 16465 | 7 |
| Vertebrates | Scophthalmus maximus | 17 |
| Bacteria | Megamonas hypermegale | 3 |
| Bacteria | Caminicella sporogenes DSM 14501 | 3 |
| Bacteria | Paenibacillus sp. FSL H7-0737 | 3 |
| Bacteria | Erythrobacter sp. HI0063 | 1 |
| Bacteria | Ileibacterium valens | 6 |
| Bacteria | Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9 | 2 |
| Bacteria | Microbacterium sediminis | 2 |
| Bacteria | Bacillus aryabhattai B8W22 | 5 |
| Bacteria | Bacillus subtilis subsp. subtilis | 6 |
| Bacteria | Mycoplasma mycoides subsp. mycoides SC str. PG1 | 4 |
| Bacteria | Sharpea azabuensis | 6 |
| Bacteria | Candidatus Sodalis pierantonius str. SOPE | 1 |
| Bacteria | Bacillus sp. OV322 | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Newport str. SL254 | 6 |
| Bacteria | Pelosinus fermentans B4 | 24 |
| Bacteria | Clostridium chromiireducens | 9 |
| Bacteria | Clostridiales bacterium | 1 |
| Invertebrates | Nippostrongylus brasiliensis | 3 |
| Bacteria | Collimonas pratensis | 1 |
| Bacteria | Lentibacillus persicus | 4 |
| Bacteria | Rhizobium sophoriradicis | 1 |
| Bacteria | Planctomycetes bacterium ADurb.Bin126 | 7 |
| Bacteria | Gammaproteobacteria bacterium | 71 |
| Bacteria | Rahnella aquatilis | 1 |
| Environmental samples | uncultured Collinsella sp. | 3 |
| Bacteria | Micavibrio aeruginosavorus ARL-13 | 1 |
| Vertebrates | Apaloderma vittatum | 1 |
| Bacteria | Thioclava indica | 1 |
| Bacteria | Salinicoccus roseus | 3 |
| Bacteria | [Clostridium] asparagiforme | 9 |
| Bacteria | Escherichia coli UMNK88 | 3 |
| Bacteria | Leptotrichia sp. oral taxon 212 | 9 |
| Bacteria | Fusobacterium sp. HMSC073F01 | 8 |
| Bacteria | Lactobacillus algidus DSM 15638 | 1 |
| Bacteria | Colwellia beringensis | 1 |
| Bacteria | Desulfuromonadales bacterium GWC2_61_20 | 2 |
| Bacteria | Propionibacterium cyclohexanicum | 4 |
| Bacteria | Mycoplasma fermentans PG18 | 3 |
| Primates | Pan troglodytes | 49 |
| Bacteria | Brevibacterium casei S18 | 1 |
| Bacteria | Enterococcus sp. 12E11_DIV0728 | 11 |
| Bacteria | Flavobacteriaceae bacterium | 2 |
| Bacteria | Lactobacillus nuruki | 8 |
| Bacteria | Geobacter sp. DSM 9736 | 1 |
| Bacteria | Sporanaerobacter sp. NJN-17 | 8 |
| Bacteria | Deinococcus proteolyticus MRP | 2 |
| Bacteria | Listeria fleischmannii subsp. coloradonensis | 8 |
| Bacteria | Bosea sp. AAP35 | 1 |
| Bacteria | Marinibacterium profundimaris | 1 |
| Bacteria | Balneola sp. EhC07 | 2 |
| Bacteria | Actinomycetospora cinnamomea | 1 |
| Bacteria | Succinivibrio dextrinosolvens DSM 3072 | 3 |
| Bacteria | Planctomycetes bacterium GWF2_42_9 | 2 |
| Bacteria | Clostridium beijerinckii NCIMB 8052 | 5 |
| Bacteria | Escherichia coli KTE73 | 6 |
| Environmental samples | Dorea longicatena CAG:42 | 1 |
| Bacteria | Streptomyces qinglanensis | 4 |
| Bacteria | Paenibacillus lautus | 4 |
| Bacteria | Serratia sp. DD3 | 6 |
| Bacteria | Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106 | 10 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | 11 |
| Bacteria | Sphingobium sp. D43FB | 1 |
| Mammals | Erinaceus europaeus | 29 |
| Bacteria | Eubacteriaceae bacterium CHKCI004 | 5 |
| Bacteria | Tetragenococcus halophilus subsp. halophilus | 29 |
| Bacteria | Paenibacillus sp. FSL H7-0357 | 4 |
| Bacteria | Halomonas sp. TQ8S | 1 |
| Bacteria | Curtobacterium sp. 'Ferrero' | 3 |
| Bacteria | Marinomonas profundimaris | 1 |
| Bacteria | Chelatococcus sp. CO-6 | 3 |
| Bacteria | Exiguobacterium sp. RIT341 | 3 |
| Bacteria | Desulfuromonas sp. | 8 |
| Bacteria | Candidatus Phycosocius bacilliformis | 1 |
| Bacteria | Variovorax sp. 369 | 1 |
| Bacteria | Streptococcus oralis | 7 |
| Bacteria | Syntrophorhabdus sp. PtaU1.Bin002 | 1 |
| Bacteria | Candidatus Competibacteraceae bacterium | 1 |
| Mammals | Neovison vison | 5 |
| Bacteria | Microbulbifer aggregans | 1 |
| Bacteria | Rubrivivax sp. SCN 71-131 | 1 |
| Bacteria | Treponema sp. | 8 |
| Bacteria | Anaerocolumna aminovalerica | 3 |
| Bacteria | Mesorhizobium sp. DCY119 | 1 |
| Bacteria | Silicimonas algicola | 1 |
| Bacteria | Rhizobium sp. Pop5 | 1 |
| Bacteria | Polaromonas sp. A23 | 1 |
| Bacteria | Anaerococcus sp. HMSC068A02 | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Infantis | 5 |
| Bacteria | Escherichia coli 97.0246 | 2 |
| Environmental samples | uncultured Eubacterium sp. | 27 |
| Bacteria | Lactobacillus acetotolerans DSM 20749 = JCM 3825 | 10 |
| Bacteria | Lactobacillus pentosus | 10 |
| Bacteria | Pusillimonas sp. L52-1-41 | 1 |
| Bacteria | Firmicutes bacterium AF12-30 | 2 |
| Bacteria | Thermoanaerobacter pseudethanolicus ATCC 33223 | 9 |
| Bacteria | Litoreibacter arenae DSM 19593 | 1 |
| Bacteria | Rickettsiales bacterium | 23 |
| Bacteria | Candidatus Aerophobetes bacterium | 4 |
| Bacteria | Photorhabdus temperata subsp. temperata Meg1 | 2 |
| Bacteria | Ruminococcus sp. 1xD21-23 | 5 |
| Bacteria | Listeria monocytogenes EGD-e | 24 |
| Bacteria | Anaerovirgula multivorans | 6 |
| Bacteria | Virgibacillus indicus | 4 |
| Bacteria | Bacillus circulans | 24 |
| Invertebrates | Culicoides sonorensis | 9 |
| Bacteria | Atopostipes suicloacalis DSM 15692 | 3 |
| Bacteria | Streptococcus dysgalactiae subsp. equisimilis RE378 | 7 |
| Bacteria | Mycoplasma mycoides subsp. capri LC str. 95010 | 3 |
| Bacteria | Puniceicoccaceae bacterium | 4 |
| Bacteria | Pseudolabrys sp. GY_H | 1 |
| Bacteria | Corynebacterium glyciniphilum AJ 3170 | 4 |
| Bacteria | Jeotgalibacillus alimentarius | 1 |
| Bacteria | Lactococcus garvieae Lg2 | 6 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhimurium str. CFSAN000648 | 9 |
| Invertebrates | Scylla olivacea | 3 |
| Bacteria | Pasteurella skyensis | 3 |
| Bacteria | Rhizobacter sp. Root404 | 1 |
| Bacteria | Pseudomonas sp. HMWF031 | 1 |
| Bacteria | Opitutaceae bacterium EW11 | 7 |
| Bacteria | Lactobacillus vaccinostercus DSM 20634 | 2 |
| Bacteria | Paenibacillus larvae subsp. pulvifaciens | 7 |
| Bacteria | Listeria monocytogenes serotype 1/2a | 15 |
| Bacteria | Streptomyces sp. TSRI0384-2 | 1 |
| Bacteria | Escherichia coli O7:K1 str. CE10 | 5 |
| Bacteria | Erwinia tasmaniensis Et1/99 | 4 |
| Environmental samples | Clostridium sp. CAG:510 | 1 |
| Bacteria | Clostridiales bacterium 36_14 | 5 |
| Bacteria | Rhodococcus aetherivorans | 1 |
| Bacteria | Comamonas testosteroni CNB-2 | 1 |
| Bacteria | Zetaproteobacteria bacterium CG_4_10_14_3_um_filter_54_28 | 1 |
| Bacteria | Candidatus Edwardsbacteria bacterium | 4 |
| Bacteria | Clostridium gasigenes | 8 |
| Bacteria | Photobacterium sp. CECT 9190 | 3 |
| Bacteria | Streptococcus dysgalactiae subsp. equisimilis AC-2713 | 5 |
| Bacteria | Paraburkholderia piptadeniae | 2 |
| Bacteria | Elusimicrobia bacterium GWA2_61_42 | 2 |
| Bacteria | Mesorhizobium sp. YM1C-6-2 | 3 |
| Bacteria | Mycoplasma putrefaciens Mput9231 | 2 |
| Bacteria | Halotalea alkalilenta | 1 |
| Bacteria | Cognatiyoonia koreensis | 1 |
| Bacteria | Devosia enhydra | 1 |
| Bacteria | Caulobacterales bacterium 68-7 | 1 |
| Bacteria | Vibrio tasmaniensis 1F-187 | 1 |
| Bacteria | Halomonas sp. GFAJ-1 | 2 |
| Bacteria | Eubacterium sp. An11 | 2 |
| Bacteria | Candidatus Thiodictyon syntrophicum | 1 |
| Bacteria | Tistrella mobilis KA081020-065 | 2 |
| Bacteria | Corynebacterium pyruviciproducens ATCC BAA-1742 | 1 |
| Bacteria | Clostridioides difficile Y384 | 12 |
| Bacteria | Clostridiaceae bacterium DSM 106076 | 5 |
| Bacteria | Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39 | 2 |
| Bacteria | Pseudoalteromonas tunicata D2 | 1 |
| Bacteria | Corynebacterium camporealensis | 2 |
| Bacteria | Photorhabdus thracensis | 3 |
| Bacteria | Phaeospirillum fulvum | 1 |
| Bacteria | Escherichia coli SE11 | 3 |
| Bacteria | Sphingomonadales bacterium 28-55-16 | 1 |
| Bacteria | Roseburia inulinivorans | 2 |
| Bacteria | Clostridium sp. ASF502 | 5 |
| Bacteria | Paenibacillus sp. A3 | 3 |
| Bacteria | Deltaproteobacteria bacterium CG2_30_63_29 | 1 |
| Bacteria | Fictibacillus enclensis | 6 |
| Bacteria | Lactobacillus johnsonii | 4 |
| Bacteria | Thermoanaerobacter sp. YS13 | 3 |
| Bacteria | Modestobacter sp. Leaf380 | 4 |
| Bacteria | Leptospiraceae bacterium | 1 |
| Bacteria | Sphingomonas sp. Leaf32 | 1 |
| Bacteria | Curtobacterium sp. AG1037 | 2 |
| Bacteria | Staphylococcus haemolyticus | 1 |
| Bacteria | Paracoccus halophilus | 1 |
| Bacteria | Enterococcus faecalis ERV31 | 2 |
| Bacteria | Buttiauxella agrestis ATCC 33320 | 11 |
| Bacteria | Burkholderia sp. MSh2 | 1 |
| Bacteria | Desulfuromonas soudanensis | 3 |
| Bacteria | Methylosinus sp. R-45379 | 1 |
| Bacteria | Loktanella fryxellensis | 1 |
| Bacteria | Streptomyces mangrovisoli | 1 |
| Bacteria | Pseudomonas sp. o96-267 | 2 |
| Bacteria | Nitrospina gracilis 3/211 | 1 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_19FT_COMBO_58_17 | 2 |
| Bacteria | Nakamurella multipartita DSM 44233 | 2 |
| Bacteria | Roseimicrobium gellanilyticum | 2 |
| Environmental samples | uncultured Coprococcus sp. | 1 |
| Bacteria | Escherichia coli 541-15 | 4 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_48_11 | 2 |
| Bacteria | Hyphomonas neptunium ATCC 15444 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.04.2.1 | 1 |
| Bacteria | Planctomycetes bacterium RIFCSPHIGHO2_02_FULL_38_41 | 2 |
| Bacteria | Geodermatophilus sp. TF02-6 | 2 |
| Bacteria | Thalassospira sp. MCCC 1A02898 | 1 |
| Bacteria | Bacillus methanolicus PB1 | 4 |
| Bacteria | Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_42_15 | 1 |
| Bacteria | Enterobacter hormaechei | 2 |
| Bacteria | Roseburia intestinalis XB6B4 | 1 |
| Bacteria | Streptomyces sp. HGB0020 | 2 |
| Bacteria | Microbacterium sp. PM5 | 1 |
| Bacteria | Bartonella henselae str. Houston-1 | 2 |
| Bacteria | Candidatus Aminicenantes bacterium 4484_214 | 4 |
| Bacteria | bacterium ADurb.BinA186 | 1 |
| Bacteria | Thiobacillus sp. 63-78 | 1 |
| Bacteria | Deltaproteobacteria bacterium ADurb.Bin510 | 1 |
| Vertebrates | Phoenicopterus ruber ruber | 3 |
| Bacteria | Enterococcus faecalis ERV62 | 2 |
| Bacteria | Pseudomonas sp. HPB0071 | 2 |
| Bacteria | Haemophilus sputorum HK 2154 | 3 |
| Bacteria | Brachybacterium sp. HMSC06H03 | 1 |
| Bacteria | Pseudoalteromonas ruthenica | 1 |
| Bacteria | Listeria ivanovii subsp. londoniensis | 4 |
| Bacteria | Xenorhabdus stockiae | 3 |
| Bacteria | Pseudomonas sp. HAR-UPW-AIA-41 | 1 |
| Bacteria | Leifsonia sp. Root112D2 | 3 |
| Bacteria | Elusimicrobia bacterium RIFCSPLOWO2_12_FULL_59_9 | 2 |
| Bacteria | Brachyspira pilosicoli SP16 | 2 |
| Bacteria | Gemmatimonadaceae bacterium 4484_173 | 3 |
| Bacteria | Roseomonas sp. Z24 | 2 |
| Bacteria | Enterococcus faecalis T2 | 3 |
| Bacteria | Leifsonia rubra CMS 76R | 4 |
| Bacteria | Enterococcus faecalis PF3 | 5 |
| Bacteria | Rhodopirellula sp. | 4 |
| Bacteria | Bacillus sp. NRRL B-14911 | 6 |
| Bacteria | Clostridium saccharobutylicum DSM 13864 | 5 |
| Bacteria | Betaproteobacteria bacterium CG2_30_59_46 | 1 |
| Bacteria | Monoglobus pectinilyticus | 1 |
| Bacteria | Pseudodesulfovibrio aespoeensis Aspo-2 | 1 |
| Bacteria | Brucella melitensis bv. 1 str. 16M | 1 |
| Bacteria | Desulfomicrobium orale DSM 12838 | 1 |
| Bacteria | Methylobacterium gossipiicola | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar India str. SA20085604 | 4 |
| Bacteria | Thauera sp. MZ1T | 1 |
| Bacteria | Xenorhabdus khoisanae | 5 |
| Bacteria | Mannheimia sp. USDA-ARS-USMARC-1261 | 3 |
| Bacteria | Corallococcus coralloides DSM 2259 | 3 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_50_17 | 2 |
| Bacteria | Labedella gwakjiensis | 4 |
| Bacteria | Photobacterium sanctipauli | 3 |
| Bacteria | Halomonas urumqiensis | 2 |
| Invertebrates | Anopheles christyi | 2 |
| Bacteria | Aerococcus urinaehominis | 3 |
| Bacteria | Bacillus megaterium DSM 319 | 4 |
| Environmental samples | Blautia sp. CAG:257 | 1 |
| Bacteria | Kiritimatiella glycovorans | 6 |
| Bacteria | Couchioplanes caeruleus | 1 |
| Bacteria | Anaerobacillus alkalidiazotrophicus | 2 |
| Bacteria | Vibrio sp. AND4 | 3 |
| Invertebrates | Ramazzottius varieornatus | 4 |
| Bacteria | Bacillus aryabhattai | 2 |
| Bacteria | Methylobacterium sp. Leaf99 | 2 |
| Bacteria | Lactobacillus coleohominis 101-4-CHN | 5 |
| Bacteria | Nocardioides sp. Soil777 | 2 |
| Bacteria | Nocardioides sp. Root122 | 1 |
| Bacteria | Bacillus subterraneus | 5 |
| Bacteria | Idiomarina indica | 1 |
| Bacteria | Enterobacteriaceae bacterium ENNIH2 | 1 |
| Bacteria | Bacillus shackletonii | 11 |
| Bacteria | Bacillus sp. V59.32b | 5 |
| Bacteria | Phyllobacterium zundukense | 1 |
| Bacteria | Nitrospiraceae bacterium | 1 |
| Bacteria | Clostridium sp. USBA 49 | 6 |
| Bacteria | Aidingimonas halophila | 2 |
| Bacteria | Listeria welshimeri serovar 6b str. SLCC5334 | 12 |
| Bacteria | Azospirillum sp. RU38E | 1 |
| Bacteria | Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 | 2 |
| Bacteria | Streptococcus pyogenes MGAS10750 | 4 |
| Bacteria | Sphingobium sp. MI1205 | 1 |
| Bacteria | Streptococcus sp. 'caviae' | 10 |
| Bacteria | Salinibacillus kushneri | 7 |
| Bacteria | Enterovibrio pacificus | 1 |
| Bacteria | Vibrio nigripulchritudo FTn2 | 1 |
| Bacteria | Streptococcus sobrinus W1703 | 7 |
| Bacteria | Streptomyces antioxidans | 1 |
| Bacteria | candidate division KSB1 bacterium 4484_219 | 5 |
| Bacteria | Ascidiaceihabitans donghaensis | 1 |
| Bacteria | Parachlamydia sp. | 2 |
| Bacteria | Corynebacterium xerosis | 5 |
| Bacteria | Idiomarina loihiensis | 1 |
| Bacteria | Sphingopyxis witflariensis | 1 |
| Bacteria | Spiroplasma clarkii | 17 |
| Bacteria | Bifidobacterium breve | 3 |
| Bacteria | Anaerococcus hydrogenalis ACS-025-V-Sch4 | 4 |
| Bacteria | candidate division KSB1 bacterium RBG_16_48_16 | 3 |
| Bacteria | Cedecea lapagei | 2 |
| Bacteria | Listeria marthii FSL S4-120 | 6 |
| Bacteria | Devosia sp. Root413D1 | 2 |
| Bacteria | Phycisphaerae bacterium ST-NAGAB-D1 | 4 |
| Bacteria | Thauera sp. 63 | 1 |
| Bacteria | Serratia nematodiphila DZ0503SBS1 | 2 |
| Bacteria | Rhodobacteraceae bacterium 4F10 | 1 |
| Bacteria | Curtobacterium sp. Leaf261 | 3 |
| Bacteria | Tropicimonas isoalkanivorans | 2 |
| Bacteria | Sphingomonas sp. 1PNM-20 | 1 |
| Bacteria | Shigella boydii Sb227 | 3 |
| Bacteria | Bacillus sp. B-jedd | 4 |
| Bacteria | Bifidobacterium magnum | 1 |
| Bacteria | Enterococcus sp. 5B3_DIV0040 | 4 |
| Bacteria | Dermatophilus congolensis | 3 |
| Bacteria | Halomonas heilongjiangensis | 2 |
| Bacteria | Candidatus Omnitrophica bacterium CG23_combo_of_CG06-09_8_20_14_all_40_11 | 2 |
| Bacteria | Pleomorphomonas carboxyditropha | 1 |
| Bacteria | Fibrobacter succinogenes subsp. succinogenes S85 | 2 |
| Bacteria | Vibrio brasiliensis LMG 20546 | 7 |
| Bacteria | Gordonia effusa NBRC 100432 | 2 |
| Bacteria | Neisseria sp. oral taxon 020 str. F0370 | 1 |
| Bacteria | Candidatus Scalindua brodae | 1 |
| Bacteria | Tetragenococcus halophilus subsp. halophilus DSM 20339 | 10 |
| Bacteria | Oleiphilus messinensis | 2 |
| Bacteria | Geobacter sp. OR-1 | 2 |
| Bacteria | Dorea sp. OM07-5 | 1 |
| Bacteria | Cryobacterium sp. Hh39 | 5 |
| Bacteria | Streptococcus pneumoniae GA47502 | 2 |
| Bacteria | Escherichia coli ISC56 | 10 |
| Bacteria | Ruminococcaceae bacterium | 3 |
| Bacteria | Lachnoanaerobaculum saburreum DSM 3986 | 2 |
| Bacteria | Alkaliphilus peptidifermentans DSM 18978 | 3 |
| Bacteria | Epibacterium mobile | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Senftenberg str. A4-543 | 2 |
| Bacteria | Halobacillus sp. BBL2006 | 7 |
| Bacteria | Yonghaparkia sp. Root332 | 3 |
| Bacteria | Sinorhizobium meliloti | 1 |
| Bacteria | Modestobacter marinus | 2 |
| Bacteria | Proteobacteria bacterium TMED154 | 1 |
| Bacteria | Serratia sp. 14-2641 | 2 |
| Bacteria | Streptomyces fradiae | 2 |
| Bacteria | candidate division Zixibacteria bacterium RBG-1 | 1 |
| Bacteria | Yokenella regensburgei | 1 |
| Bacteria | Oceanospirillales bacterium | 3 |
| Bacteria | Paenibacillus sp. GP183 | 2 |
| Bacteria | Vitiosangium sp. GDMCC 1.1324 | 3 |
| Bacteria | Staphylococcus microti | 6 |
| Bacteria | Acidovorax sp. Leaf160 | 2 |
| Bacteria | Streptomyces cattleya NRRL 8057 = DSM 46488 | 1 |
| Bacteria | Candidatus Cloacimonas sp. 4484_143 | 6 |
| Bacteria | Pseudomonas fluorescens F113 | 3 |
| Bacteria | Lactobacillus curvatus JCM 1096 = DSM 20019 | 2 |
| Bacteria | Microvirga sp. BSC39 | 1 |
| Mammals | Ornithorhynchus anatinus | 9 |
| Bacteria | Neisseria meningitidis | 3 |
| Bacteria | Halobacillus karajensis | 6 |
| Bacteria | Janthinobacterium sp. YR213 | 1 |
| Bacteria | Tepidanaerobacter syntrophicus | 7 |
| Bacteria | Pelagibacterium sp. | 1 |
| Bacteria | Anaerotignum lactatifermentans DSM 14214 | 2 |
| Bacteria | Corynebacterium kroppenstedtii DSM 44385 | 2 |
| Bacteria | Escherichia coli H591 | 4 |
| Bacteria | Faecalitalea cylindroides ATCC 27803 | 5 |
| Bacteria | Enterococcus mundtii QU 25 | 18 |
| Bacteria | Curtobacterium sp. MCBA15_001 | 1 |
| Bacteria | Actinomyces sp. oral taxon 175 str. F0384 | 1 |
| Bacteria | Halanaerobium kushneri | 6 |
| Bacteria | Gynuella sunshinyii YC6258 | 4 |
| Bacteria | Pseudomonas hussainii | 1 |
| Bacteria | Pseudomonas sp. SMT-1 | 2 |
| Bacteria | Comamonas testosteroni | 2 |
| Bacteria | Staphylococcus gallinarum | 3 |
| Bacteria | Xenorhabdus nematophila F1 | 1 |
| Bacteria | Streptomyces bungoensis | 1 |
| Bacteria | Frondihabitans sp. PAMC 28766 | 3 |
| Bacteria | Paracoccus sp. SM22M-07 | 1 |
| Bacteria | Thermococcus sp. EP1 | 1 |
| Bacteria | Sinorhizobium sp. LM21 | 2 |
| Bacteria | Ruegeria pomeroyi DSS-3 | 1 |
| Bacteria | Nitrospinae bacterium CG22_combo_CG10-13_8_21_14_all_47_10 | 1 |
| Bacteria | Xanthomonas citri pv. mangiferaeindicae | 1 |
| Bacteria | Massilia eurypsychrophila | 1 |
| Bacteria | Paenibacillus macquariensis subsp. macquariensis | 2 |
| Bacteria | Kingella oralis ATCC 51147 | 1 |
| Bacteria | Olsenella sp. oral taxon 809 str. F0356 | 5 |
| Environmental samples | Firmicutes bacterium CAG:227 | 1 |
| Bacteria | Phenylobacterium sp. LX32 | 1 |
| Bacteria | bacterium ADurb.Bin363 | 1 |
| Bacteria | Methylobacterium sp. Leaf125 | 1 |
| Bacteria | Gordonia sp. | 1 |
| Bacteria | Lentisphaerae bacterium GWF2_52_8 | 3 |
| Bacteria | Syntrophus sp. (in: Bacteria) | 1 |
| Bacteria | Actinomyces naeslundii str. Howell 279 | 1 |
| Bacteria | Saccharophagus degradans 2-40 | 1 |
| Bacteria | Mesorhizobium sp. Root157 | 2 |
| Environmental samples | uncultured Termite group 1 bacterium phylotype Rs-D17 | 1 |
| Bacteria | Staphylococcus condimenti | 7 |
| Bacteria | Paenibacillus sp. VKM B-2647 | 2 |
| Bacteria | Enterobacter asburiae | 2 |
| Bacteria | Methylobacterium sp. AMS5 | 1 |
| Bacteria | Fusicatenibacter saccharivorans | 1 |
| Bacteria | Clostridium sp. AF27-5AA | 1 |
| Bacteria | Faecalitalea cylindroides | 3 |
| Bacteria | Solemya velum gill symbiont | 1 |
| Bacteria | Brachyspira murdochii DSM 12563 | 3 |
| Bacteria | Lysobacter tolerans | 1 |
| Bacteria | Pseudomonas citronellolis | 1 |
| Bacteria | Streptomyces sp. 70 | 1 |
| Bacteria | Rhizobiales bacterium | 7 |
| Vertebrates | Nipponia nippon | 7 |
| Bacteria | Burkholderia sp. KK1 | 1 |
| Environmental samples | Peptostreptococcus anaerobius CAG:621 | 3 |
| Bacteria | Streptococcus salivarius 57.I | 2 |
| Bacteria | Rathayibacter tanaceti | 4 |
| Bacteria | Pseudomonas sp. HMSC059F05 | 1 |
| Bacteria | Methylobacterium sp. Leaf111 | 1 |
| Bacteria | Vibrio sp. J2-4 | 2 |
| Bacteria | Gallibacterium anatis IPDH697-78 | 1 |
| Bacteria | Klebsiella pneumoniae 909957 | 6 |
| Bacteria | Escherichia coli O25b:H4-ST131 | 3 |
| Vertebrates | Aptenodytes forsteri | 7 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.15.2.1 | 1 |
| Invertebrates | Cherax quadricarinatus | 1 |
| Bacteria | [Clostridium] aminophilum | 2 |
| Bacteria | Pseudoalteromonas piscicida | 2 |
| Bacteria | Allonocardiopsis opalescens | 2 |
| Bacteria | Vibrio cholerae O1 biovar El Tor str. N16961 | 8 |
| Bacteria | Lactococcus lactis subsp. hordniae | 1 |
| Bacteria | Streptomyces pactum | 1 |
| Bacteria | Rhodobacter sp. | 2 |
| Bacteria | Lachnospiraceae bacterium 8_1_57FAA | 2 |
| Bacteria | Verrucomicrobia bacterium 21-51-4 | 1 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 | 1 |
| Bacteria | Spiroplasma culicicola AES-1 | 4 |
| Environmental samples | hydrocarbon metagenome | 3 |
| Bacteria | Aerococcus sp. 1KP-2016 | 2 |
| Bacteria | bacterium BMS3Abin05 | 3 |
| Bacteria | Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 | 1 |
| Bacteria | Flavobacteriaceae bacterium TMED208 | 1 |
| Bacteria | Candidatus Delongbacteria bacterium | 3 |
| Bacteria | Lactobacillus xiangfangensis | 3 |
| Bacteria | Sphingorhabdus sp. M41 | 1 |
| Bacteria | Agrobacterium rosae | 1 |
| Bacteria | Spirochaetae bacterium HGW-Spirochaetae-6 | 1 |
| Bacteria | Methylobacterium sp. Leaf93 | 3 |
| Bacteria | Curtobacterium sp. 9128 | 1 |
| Bacteria | Candidatus Raymondbacteria bacterium RIFOXYD12_FULL_49_13 | 2 |
| Bacteria | Paenibacillus sp. Soil724D2 | 1 |
| Bacteria | Burkholderia sp. Leaf177 | 1 |
| Bacteria | Oblitimonas alkaliphila | 1 |
| Bacteria | Haliangium ochraceum DSM 14365 | 4 |
| Bacteria | Planctomycetes bacterium ADurb.Bin412 | 3 |
| Bacteria | Dietzia sp. 111N12-1 | 1 |
| Bacteria | Micromonospora echinaurantiaca | 1 |
| Bacteria | Glycomyces fuscus | 1 |
| Bacteria | Candidatus Cloacimonetes bacterium ADurb.Bin089 | 1 |
| Bacteria | Enterococcus pseudoavium | 2 |
| Bacteria | Celeribacter halophilus | 1 |
| Bacteria | Thermoplasmatales archaeon SCGC AB-540-F20 | 1 |
| Bacteria | Microbacterium hominis | 3 |
| Bacteria | Sphingomonas sp. SKA58 | 1 |
| Bacteria | Opitutaceae bacterium TSB47 | 2 |
| Bacteria | Sphingobium sp. SYK-6 | 1 |
| Bacteria | Enterobacteriaceae bacterium bta3-1 | 4 |
| Bacteria | Sporosarcina psychrophila | 4 |
| Bacteria | Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572 | 2 |
| Bacteria | Candidatus Fermentibacteria bacterium | 6 |
| Bacteria | Anaeromassilibacillus sp. An172 | 1 |
| Bacteria | Arthrobacter psychrolactophilus | 2 |
| Bacteria | Arsenophonus nasoniae | 4 |
| Bacteria | Pseudomonas indica | 2 |
| Bacteria | Carnobacterium inhibens subsp. gilichinskyi | 2 |
| Bacteria | Escherichia coli ATCC BAA-2209 | 3 |
| Bacteria | Roseobacter sp. | 1 |
| Bacteria | Pelosinus propionicus DSM 13327 | 8 |
| Bacteria | Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 | 1 |
| Bacteria | Clostridium sp. chh4-2 | 6 |
| Bacteria | Actinobacillus equuli subsp. equuli | 1 |
| Bacteria | Lactobacillus saerimneri 30a | 5 |
| Invertebrates | Hydra vulgaris | 2 |
| Bacteria | Alkalibacterium subtropicum | 4 |
| Bacteria | Lentisphaerae bacterium ADurb.BinA184 | 4 |
| Bacteria | Veillonella criceti | 1 |
| Bacteria | Blastomonas sp. AAP25 | 1 |
| Bacteria | Citrobacter sp. CFNIH10 | 12 |
| Bacteria | Brachybacterium endophyticum | 4 |
| Bacteria | Syntrophus sp. PtaB.Bin001 | 2 |
| Bacteria | Vibrio penaeicida | 2 |
| Bacteria | Porphyrobacter mercurialis | 1 |
| Bacteria | Bartonella australis Aust/NH1 | 1 |
| Bacteria | Eubacterium ventriosum | 1 |
| Bacteria | Planococcus maritimus | 2 |
| Bacteria | Pseudomonas sp. TC-11 | 1 |
| Bacteria | Clostridium sp. OM04-7 | 1 |
| Bacteria | Sinorhizobium meliloti SM11 | 1 |
| Bacteria | Izhakiella capsodis | 5 |
| Bacteria | Ignavibacteria bacterium CG22_combo_CG10-13_8_21_14_all_37_15 | 3 |
| Bacteria | Pectobacterium carotovorum subsp. odoriferum | 2 |
| Bacteria | Loktanella atrilutea | 1 |
| Bacteria | Lactobacillus paralimentarius DSM 19674 | 7 |
| Bacteria | Rhodoferax sp. RIFCSPLOWO2_12_FULL_60_11 | 2 |
| Bacteria | Halomonas korlensis | 2 |
| Bacteria | Pseudoruegeria aquimaris | 1 |
| Bacteria | [Clostridium] ultunense Esp | 7 |
| Bacteria | Fibrobacter sp. UWB8 | 2 |
| Invertebrates | Caenorhabditis nigoni | 5 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 | 1 |
| Bacteria | Mycobacterium tuberculosis | 5 |
| Bacteria | Spirochaetes bacterium RBG_13_68_11 | 3 |
| Bacteria | Roseburia hominis A2-183 | 2 |
| Bacteria | Cohnella sp. OV330 | 2 |
| Bacteria | Ethanoligenens harbinense | 3 |
| Bacteria | Arthrobacter nitrophenolicus | 3 |
| Bacteria | Paenarthrobacter aurescens TC1 | 1 |
| Bacteria | Azoarcus sp. | 1 |
| Bacteria | Subdoligranulum variabile DSM 15176 | 2 |
| Bacteria | Idiomarina piscisalsi | 1 |
| Bacteria | Sporosarcina globispora | 3 |
| Bacteria | Rhodospirillaceae bacterium TMED167 | 1 |
| Bacteria | Delftia acidovorans | 1 |
| Bacteria | Bacillus sp. FJAT-21351 | 4 |
| Bacteria | Rhodococcus sp. M8 | 1 |
| Bacteria | Roseomonas sp. FDAARGOS_362 | 1 |
| Bacteria | Oligella urethralis | 1 |
| Bacteria | Streptococcus downei MFe28 | 1 |
| Bacteria | Sulfuriferula sp. AH1 | 1 |
| Bacteria | Martelella sp. | 1 |
| Bacteria | Aeromicrobium camelliae | 4 |
| Bacteria | Bacillus paralicheniformis | 6 |
| Bacteria | Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_50_8 | 1 |
| Bacteria | Streptomyces himastatinicus ATCC 53653 | 3 |
| Bacteria | Curtobacterium luteum | 2 |
| Bacteria | Bradyrhizobium sp. LMTR 3 | 1 |
| Bacteria | Planococcus versutus | 2 |
| Bacteria | Streptomyces cinnamoneus | 1 |
| Bacteria | Streptomyces sparsogenes DSM 40356 | 4 |
| Bacteria | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_49_13 | 2 |
| Bacteria | Salinivibrio sp. ML290 | 2 |
| Bacteria | Coprococcus eutactus | 1 |
| Invertebrates | Haemonchus placei | 2 |
| Bacteria | Endozoicomonas numazuensis | 7 |
| Bacteria | Spirochaetes bacterium ADurb.Bin001 | 3 |
| Bacteria | Bacillus zeae | 2 |
| Bacteria | Candidatus Altiarchaeales archaeon WOR_SM1_79 | 1 |
| Bacteria | Paenibacillus larvae subsp. larvae | 4 |
| Bacteria | Roseovarius gaetbuli | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_45_11 | 1 |
| Bacteria | Peptostreptococcus anaerobius 653-L | 3 |
| Bacteria | Gemmobacter megaterium | 1 |
| Invertebrates | Dendroctonus ponderosae | 5 |
| Bacteria | Arsukibacterium ikkense | 1 |
| Bacteria | Sphingopyxis flava | 1 |
| Bacteria | Thalassococcus halodurans | 1 |
| Bacteria | Citrobacter sp. MGH103 | 2 |
| Bacteria | Rhizobium sp. NXC24 | 2 |
| Bacteria | Bradyrhizobium sp. R5 | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23 | 1 |
| Bacteria | Burkholderia sp. TNe-862 | 1 |
| Bacteria | Pseudomonas cichorii JBC1 | 3 |
| Bacteria | [Bacillus] caldolyticus | 1 |
| Invertebrates | Papilio machaon | 2 |
| Bacteria | Rhizobium acidisoli | 2 |
| Bacteria | Methyloceanibacter methanicus | 1 |
| Bacteria | Kiritimatiellaceae bacterium | 2 |
| Bacteria | Photorhabdus luminescens BA1 | 1 |
| Bacteria | Paenibacillus uliginis N3/975 | 2 |
| Bacteria | Lactobacillus delbrueckii subsp. lactis DSM 20072 | 3 |
| Bacteria | Mangrovibacterium marinum | 1 |
| Bacteria | Tepidibacter formicigenes DSM 15518 | 1 |
| Bacteria | Mesorhizobium wenxiniae | 1 |
| Bacteria | Azonexus hydrophilus | 1 |
| Bacteria | Burkholderia sp. OLGA172 | 1 |
| Bacteria | Candidatus Erwinia haradaeae | 2 |
| Bacteria | Pseudomonas sp. SSM44 | 1 |
| Bacteria | Methylocella silvestris | 1 |
| Bacteria | Quadrisphaera granulorum | 1 |
| Bacteria | Pseudomonas aeruginosa VRFPA03 | 1 |
| Bacteria | Moritella sp. | 1 |
| Bacteria | Bibersteinia trehalosi USDA-ARS-USMARC-190 | 2 |
| Bacteria | Bosea sp. OK403 | 1 |
| Bacteria | Fibrobacter sp. UWH6 | 1 |
| Environmental samples | Clostridium sp. CAG:264 | 1 |
| Bacteria | Sphingobium sp. EP60837 | 1 |
| Bacteria | Weissella thailandensis fsh4-2 | 1 |
| Bacteria | Escherichia coli MS 117-3 | 3 |
| Bacteria | Burkholderia cenocepacia PC184 | 1 |
| Bacteria | Methylobacterium oryzae CBMB20 | 2 |
| Bacteria | Clostridium sp. HMb25 | 1 |
| Bacteria | Roseomonas stagni DSM 19981 | 1 |
| Bacteria | Microcella sp. HL-107 | 1 |
| Bacteria | Cellulomonas sp. B6 | 2 |
| Bacteria | Acetobacter sp. 46_36 | 1 |
| Bacteria | Leifsonia sp. CL147 | 3 |
| Bacteria | Aeromonas dhakensis | 2 |
| Bacteria | Herminiimonas arsenicoxydans | 1 |
| Bacteria | Burkholderia glumae | 1 |
| Environmental samples | Bacteroides sp. CAG:545 | 1 |
| Bacteria | Dokdonella koreensis DS-123 | 1 |
| Bacteria | Haemophilus influenzae Rd KW20 | 2 |
| Bacteria | Pseudomonas guangdongensis | 1 |
| Bacteria | Candidatus Pandoraea novymonadis | 1 |
| Bacteria | Acidovorax valerianellae | 2 |
| Bacteria | Bacillus sp. ru9509.4 | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_60_17 | 1 |
| Bacteria | Selenomonas sp. oral taxon 149 str. 67H29BP | 2 |
| Bacteria | Xanthomonas phaseoli pv. dieffenbachiae | 1 |
| Bacteria | Methylorubrum extorquens PA1 | 1 |
| Bacteria | Paraburkholderia tropica | 1 |
| Bacteria | Candidatus Hepatoplasma crinochetorum Av | 1 |
| Vertebrates | Callorhinchus milii | 5 |
| Bacteria | Streptococcus equinus JB1 | 1 |
| Bacteria | Spiribacter sp. E85 | 1 |
| Bacteria | Arthrobacter woluwensis | 2 |
| Bacteria | Lactobacillus murinus | 2 |
| Bacteria | bacterium 1XD21-70 | 2 |
| Bacteria | Sphingomonas sp. Leaf343 | 1 |
| Bacteria | Erythrobacteraceae bacterium | 2 |
| Bacteria | Actinopolyspora mortivallis | 1 |
| Bacteria | Pseudomonas protegens Pf-5 | 4 |
| Bacteria | Lactobacillus jensenii | 1 |
| Bacteria | Clostridium sp. AF24-2LB | 1 |
| Bacteria | Jannaschia seohaensis | 1 |
| Bacteria | Lactococcus lactis subsp. lactis CNCM I-1631 | 1 |
| Bacteria | Paraburkholderia phymatum STM815 | 2 |
| Bacteria | Clostridium sp. AF50-3 | 1 |
| Bacteria | Terrabacter sp. 28 | 1 |
| Bacteria | Hoeflea sp. BRH_c9 | 1 |
| Bacteria | Stenotrophomonas sp. KCTC 12332 | 1 |
| Bacteria | Enterococcus faecalis ERV72 | 2 |
| Bacteria | Taylorella asinigenitalis 14/45 | 1 |
| Bacteria | Rhodobacter maris | 2 |
| Bacteria | Caulobacter sp. FWC26 | 1 |
| Invertebrates | Sphaeroforma arctica JP610 | 2 |
| Bacteria | Arthrobacter sp. ERGS1:01 | 2 |
| Bacteria | Carnobacterium divergens | 1 |
| Bacteria | candidate division TA06 bacterium DG_26 | 3 |
| Bacteria | Anoxybacillus vitaminiphilus | 3 |
| Bacteria | Spiroplasma endosymbiont of Glossina tachinoides | 1 |
| Bacteria | Catabacter hongkongensis | 1 |
| Bacteria | Moraxella bovis | 1 |
| Bacteria | Pantoea sp. FDAARGOS_194 | 6 |
| Bacteria | Candidatus Brocadia caroliniensis | 1 |
| Bacteria | Salinibacter ruber M8 | 2 |
| Bacteria | Giesbergeria anulus | 1 |
| Bacteria | Shewanella psychrophila | 1 |
| Bacteria | Betaproteobacteria bacterium TMED22 | 1 |
| Bacteria | Desulfobacteraceae bacterium 4572_123 | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.05.1.1 | 1 |
| Bacteria | Rodentibacter trehalosifermentans | 3 |
| Bacteria | Yersinia hibernica | 2 |
| Bacteria | Colwellia psychrerythraea 34H | 1 |
| Bacteria | Brevibacillus reuszeri | 3 |
| Bacteria | Neorhizobium galegae bv. orientalis | 1 |
| Bacteria | Paenibacillus polysaccharolyticus | 2 |
| Bacteria | Pasteurella dagmatis ATCC 43325 | 2 |
| Bacteria | Enterococcus faecalis ERV63 | 2 |
| Bacteria | Thalassolituus oleivorans MIL-1 | 1 |
| Bacteria | Streptomyces sp. CB03238 | 1 |
| Bacteria | Halorhodospira halochloris | 1 |
| Bacteria | Jannaschia helgolandensis | 1 |
| Bacteria | Planctomycetaceae bacterium TMED138 | 1 |
| Bacteria | Roseburia sp. OM04-10AA | 1 |
| Bacteria | Gammaproteobacteria bacterium CG22_combo_CG10-13_8_21_14_all_40_8 | 1 |
| Bacteria | Oenococcus alcoholitolerans | 1 |
| Bacteria | Erythrobacter luteus | 1 |
| Bacteria | Psychrobacillus sp. OK028 | 3 |
| Bacteria | Rhodomicrobium udaipurense JA643 | 1 |
| Bacteria | Streptococcus sp. HSISS2 | 1 |
| Bacteria | Acinetobacter sp. WC-323 | 1 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_13_59_9 | 2 |
| Bacteria | Bordetella genomosp. 4 | 1 |
| Bacteria | Marinomonas mediterranea MMB-1 | 1 |
| Bacteria | Aliiglaciecola lipolytica E3 | 1 |
| Bacteria | Streptomyces sp. NEAU-YY421 | 3 |
| Bacteria | Parvibaculum lavamentivorans DS-1 | 1 |
| Bacteria | Elusimicrobia bacterium GWA2_62_23 | 2 |
| Bacteria | Streptomyces sp. CB02400 | 1 |
| Bacteria | Methylotenera versatilis 301 | 1 |
| Bacteria | Bacillus cereus E33L | 1 |
| Bacteria | Roseovarius nubinhibens ISM | 1 |
| Bacteria | Neisseria sp. HMSC055H02 | 1 |
| Bacteria | Spiroplasma poulsonii | 1 |
| Bacteria | Mycolicibacterium llatzerense | 1 |
| Invertebrates | Rhodnius prolixus | 2 |
| Bacteria | Methylobrevis pamukkalensis | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA61 | 6 |
| Bacteria | Nitrospirae bacterium GWC2_57_13 | 1 |
| Bacteria | Histophilus somni 129PT | 3 |
| Bacteria | Oceanimonas sp. GK1 | 2 |
| Bacteria | Alsobacter sp. SH9 | 1 |
| Bacteria | Borrelia hermsii | 1 |
| Bacteria | Syntrophus sp. PtaU1.Bin005 | 1 |
| Bacteria | Kerstersia gyiorum | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Javiana str. CFSAN000904 | 3 |
| Bacteria | Streptomyces sp. CB02414 | 1 |
| Bacteria | Curtobacterium sp. ER1/6 | 2 |
| Bacteria | Dermabacter hominis | 1 |
| Bacteria | Planctomycetes bacterium ADurb.Bin401 | 4 |
| Bacteria | Solimonas aquatica | 1 |
| Bacteria | Brevundimonas sp. LM2 | 1 |
| Bacteria | Planctopirus hydrillae | 1 |
| Bacteria | Alcanivorax nanhaiticus | 1 |
| Bacteria | Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 | 1 |
| Bacteria | Paraburkholderia sp. DHOM06 | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED182 | 1 |
| Bacteria | Chlamydiales bacterium 38-26 | 2 |
| Bacteria | Limnohabitans sp. 2KL-17 | 1 |
| Bacteria | Mycobacteroides abscessus subsp. massiliense | 3 |
| Bacteria | Granulicatella sp. HMSC31F03 | 2 |
| Bacteria | Streptococcus dysgalactiae subsp. dysgalactiae | 1 |
| Bacteria | Selenomonas sp. oral taxon 920 | 1 |
| Bacteria | Klebsiella sp. OBRC7 | 2 |
| Bacteria | Proteobacteria bacterium SG_bin4 | 1 |
| Bacteria | Rhizobiales bacterium 17-65-6 | 1 |
| Bacteria | Nitrospirae bacterium GWC2_57_9 | 1 |
| Bacteria | Aestuariispira insulae | 1 |
| Bacteria | Desulfovibrionaceae bacterium CG1_02_65_16 | 1 |
| Bacteria | Bradyrhizobium pachyrhizi | 1 |
| Bacteria | Clostridium sp. AF23-6LB | 1 |
| Bacteria | Sphingobium sp. C100 | 1 |
| Bacteria | Desulfuromonas acetoxidans DSM 684 | 2 |
| Bacteria | Streptomyces sp. MK-45 | 2 |
| Bacteria | Donghicola sp. KarMa | 1 |
| Bacteria | Lactococcus lactis subsp. cremoris KW2 | 1 |
| Invertebrates | Suberites domuncula | 1 |
| Bacteria | Desulfonauticus sp. 38_4375 | 1 |
| Bacteria | Candidatus Nitrosoglobus terrae | 1 |
| Bacteria | Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 | 1 |
| Bacteria | Microbacterium sp. AISO3 | 3 |
| Bacteria | Gordonia namibiensis NBRC 108229 | 1 |
| Bacteria | Lactobacillus animalis | 1 |
| Bacteria | Cutibacterium acnes HL201PA1 | 1 |
| Bacteria | Alicyclobacillus macrosporangiidus | 1 |
| Bacteria | Halomonadaceae bacterium T82-2 | 2 |
| Bacteria | Stenotrophomonas daejeonensis | 1 |
| Bacteria | Curvibacter sp. PAE-UM | 1 |
| Bacteria | Lonsdalea populi | 1 |
| Bacteria | Archangium gephyra | 4 |
| Bacteria | Stenotrophomonas sp. | 1 |
| Bacteria | Thermoplasmata archaeon M9B1D | 1 |
| Bacteria | Albidovulum xiamenense | 1 |
| Bacteria | Palleronia marisminoris | 1 |
| Bacteria | Pelagibacterium halotolerans B2 | 1 |
| Bacteria | Streptococcus peroris ATCC 700780 | 1 |
| Bacteria | Actinoplanes philippinensis | 1 |
| Bacteria | Streptomyces reticuli | 2 |
| Bacteria | Rhizobium phaseoli | 1 |
| Bacteria | Marinomonas posidonica IVIA-Po-181 | 1 |
| Bacteria | Microbacterium sp. 70-38 | 3 |
| Bacteria | Desulfuromonas thiophila | 3 |
| Bacteria | Polaromonas sp. OV174 | 1 |
| Bacteria | Clostridium sp. ASF356 | 4 |
| Bacteria | Rodentibacter ratti | 3 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 | 1 |
| Bacteria | Desulfovibrio fructosivorans JJ | 2 |
| Bacteria | Nitrosomonas sp. Nm132 | 1 |
| Bacteria | Microbacterium sp. UMB0228 | 2 |
| Bacteria | Snodgrassella alvi | 1 |
| Bacteria | Spiroplasma citri | 3 |
| Bacteria | Sphingobium baderi LL03 | 1 |
| Bacteria | Spongiibacteraceae bacterium | 2 |
| Bacteria | Nesiotobacter exalbescens | 3 |
| Bacteria | Streptomyces sp. CdTB01 | 1 |
| Bacteria | Burkholderiales bacterium PBB5 | 1 |
| Bacteria | Gallibacterium anatis | 2 |
| Bacteria | Enterorhabdus caecimuris B7 | 1 |
| Bacteria | Kangiella koreensis DSM 16069 | 1 |
| Bacteria | Pseudomonas sp. LAMO17WK12:I3 | 1 |
| Bacteria | Candidimonas bauzanensis | 1 |
| Bacteria | Deinococcus maricopensis DSM 21211 | 1 |
| Bacteria | Methylophaga frappieri | 1 |
| Bacteria | Escherichia coli O111:H8 str. CVM9634 | 3 |
| Bacteria | Candidatus Tenderia electrophaga | 1 |
| Bacteria | Pandoraea sputorum | 1 |
| Bacteria | Lactobacillus wasatchensis | 2 |
| Bacteria | Nitratireductor pacificus pht-3B | 2 |
| Bacteria | Microbacterium sp. 69-7 | 2 |
| Bacteria | Pseudomonas amygdali pv. mori str. 301020 | 2 |
| Bacteria | Rhizobium oryziradicis | 1 |
| Bacteria | Shewanella sp. P1-14-1 | 1 |
| Bacteria | Sphingomonas sp. KC8 | 1 |
| Bacteria | Sphaerochaeta globosa str. Buddy | 3 |
| Bacteria | Oceanobacillus profundus | 3 |
| Bacteria | Variovorax sp. WDL1 | 1 |
| Bacteria | Ignavibacteria bacterium 13_1_40CM_2_61_4 | 1 |
| Bacteria | Alphaproteobacteria bacterium ADurb.BinA305 | 1 |
| Bacteria | Akkermansia muciniphila ATCC BAA-835 | 1 |
| Bacteria | Citrobacter werkmanii NBRC 105721 | 2 |
| Bacteria | Candidatus Protochlamydia naegleriophila | 2 |
| Bacteria | Mesorhizobium sp. Root554 | 1 |
| Bacteria | Alphaproteobacteria bacterium PA1 | 1 |
| Bacteria | Burkholderia mallei ATCC 23344 | 1 |
| Bacteria | Clostridium sp. AF35-15 | 1 |
| Bacteria | Aureimonas sp. AU20 | 2 |
| Bacteria | Lysobacter silvestris | 1 |
| Bacteria | Corynebacterium sp. 2189 | 1 |
| Bacteria | candidate division Zixibacteria bacterium SM23_73 | 1 |
| Bacteria | Lysinibacillus xyleni | 1 |
| Bacteria | Loktanella salsilacus | 1 |
| Bacteria | Desulfobacterales bacterium CG23_combo_of_CG06-09_8_20_14_all_52_9 | 1 |
| Bacteria | Clavibacter michiganensis | 2 |
| Bacteria | Shewanella woodyi ATCC 51908 | 1 |
| Bacteria | Oceaniovalibus guishaninsula JLT2003 | 1 |
| Bacteria | Clostridium perfringens str. 13 | 2 |
| Bacteria | Alcaligenaceae bacterium | 1 |
| Bacteria | Brucella sp. 10RB9215 | 1 |
| Invertebrates | Apis cerana | 1 |
| Bacteria | Sphingomonas rubra | 1 |
| Bacteria | Tenericutes bacterium RIFOXYB2_FULL_36_25 | 1 |
| Bacteria | Rhodococcus sp. EsD8 | 1 |
| Bacteria | Bacillus solani | 1 |
| Bacteria | Pacificibacter marinus | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 | 1 |
| Bacteria | Actinomadura viridilutea | 2 |
| Bacteria | Rhodopseudomonas palustris TIE-1 | 1 |
| Bacteria | Alcanivorax profundi | 1 |
| Bacteria | Massilia sp. Root351 | 1 |
| Bacteria | Mycobacterium sp. GA-2829 | 1 |
| Bacteria | Pseudoalteromonas luteoviolacea DSM 6061 | 1 |
| Bacteria | Methylobacterium sp. 174MFSha1.1 | 1 |
| Bacteria | Rhodobacteraceae bacterium PARR1 | 1 |
| Bacteria | Burkholderiales bacterium | 2 |
| Bacteria | Telmatospirillum siberiense | 2 |
| Bacteria | Salipiger marinus | 1 |
| Bacteria | Candidatus Thiodiazotropha endoloripes | 1 |
| Bacteria | Halanaerobium sp. ST460_2HS_T2 | 3 |
| Bacteria | Oceanisphaera avium | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.MR.362.00.0.0 | 1 |
| Bacteria | Aeromonas sp. HMWF015 | 1 |
| Bacteria | Omnitrophica bacterium RIFCSPLOWO2_12_FULL_50_11 | 1 |
| Environmental samples | Clostridium sp. CAG:269 | 1 |
| Bacteria | Porphyrobacter sanguineus | 1 |
| Bacteria | Bordetella genomosp. 13 | 1 |
| Bacteria | Falsochrobactrum ovis | 1 |
| Bacteria | Marinobacter sp. P4B1 | 1 |
| Bacteria | Elusimicrobia bacterium GWA2_56_46 | 2 |
| Bacteria | Mesorhizobium sp. 65-26 | 1 |
| Bacteria | Pseudolabrys taiwanensis | 1 |
| Bacteria | Pseudomonas pelagia | 1 |
| Bacteria | Treponema vincentii F0403 | 1 |
| Bacteria | Azotobacter vinelandii CA6 | 2 |
| Bacteria | Streptococcus sp. HMSC034F03 | 1 |
| Bacteria | Bacillus coahuilensis p1.1.43 | 1 |
| Bacteria | Notoacmeibacter marinus | 1 |
| Bacteria | Bacillus thuringiensis serovar canadensis | 1 |
| Bacteria | Devosia sp. Root105 | 1 |
| Bacteria | Microbacterium sp. SZ1 | 1 |
| Bacteria | Moorella thermoacetica ATCC 39073 | 1 |
| Bacteria | Escherichia sp. 4726-5 | 2 |
| Bacteria | Methylorubrum extorquens AM1 | 1 |
| Bacteria | Leuconostoc carnosum JB16 | 2 |
| Bacteria | Marivita geojedonensis | 1 |
| Bacteria | Acholeplasmataceae bacterium | 1 |
| Bacteria | Caulobacter segnis ATCC 21756 | 1 |
| Bacteria | Saccharomonospora marina XMU15 | 1 |
| Bacteria | Colwellia sp. | 1 |
| Bacteria | Pacificimonas flava | 1 |
| Bacteria | Alphaproteobacteria bacterium TMED150 | 1 |
| Bacteria | Betaproteobacteria bacterium TMED156 | 1 |
| Bacteria | Chloroflexi bacterium ADurb.Bin360 | 1 |
| Bacteria | Corynebacterium sp. CNJ-954 | 1 |
| Bacteria | Sphingobium chungbukense | 1 |
| Bacteria | Brucella microti CCM 4915 | 1 |
| Bacteria | Candidatus Regiella insecticola LSR1 | 2 |
| Bacteria | Xenorhabdus innexi | 3 |
| Environmental samples | Roseburia intestinalis CAG:13 | 1 |
| Bacteria | Poseidonocella pacifica | 1 |
| Bacteria | Acidovorax delafieldii 2AN | 1 |
| Environmental samples | Bifidobacterium bifidum CAG:234 | 1 |
| Bacteria | Inquilinus limosus MP06 | 1 |
| Bacteria | Polynucleobacter sp. VK13 | 1 |
| Bacteria | Streptomyces sp. 4F | 1 |
| Bacteria | Labrys okinawensis | 1 |
| Bacteria | Xanthomonas campestris pv. campestris | 1 |
| Bacteria | Nocardioides luteus | 1 |
| Bacteria | Nocardiopsis dassonvillei | 1 |
| Bacteria | Lactobacillus gallinarum | 2 |
| Bacteria | Thermanaerovibrio acidaminovorans DSM 6589 | 3 |
| Bacteria | Deinococcus deserti VCD115 | 1 |
| Bacteria | Halomonas sp. S2151 | 2 |
| Bacteria | Mycolicibacterium rufum | 1 |
| Bacteria | Bacillus thuringiensis serovar poloniensis | 1 |
| Bacteria | Caballeronia telluris | 1 |
| Bacteria | Pseudomonas floridensis | 3 |
| Bacteria | Rhizobiales bacterium 32-66-11 | 1 |
| Bacteria | Spiroplasma diminutum CUAS-1 | 1 |
| Bacteria | Rhizobium grahamii | 1 |
| Bacteria | Sphingomonas sp. URHD0007 | 1 |
| Bacteria | Pseudoalteromonas sp. A601 | 1 |
| Bacteria | Paenibacillus sp. M-152 | 1 |
| Bacteria | Donghicola tyrosinivorans | 1 |
| Bacteria | Celeribacter marinus | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_64_85 | 2 |
| Bacteria | Selenomonas noxia F0398 | 1 |
| Bacteria | Sulfitobacter mediterraneus | 1 |
| Bacteria | Lactobacillus fuchuensis | 3 |
| Bacteria | Thalassobacter stenotrophicus | 1 |
| Bacteria | Singulisphaera acidiphila DSM 18658 | 2 |
| Bacteria | Comamonadaceae bacterium CG_4_9_14_0_8_um_filter_60_18 | 1 |
| Bacteria | Deltaproteobacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_60_8 | 1 |
| Bacteria | Chelativorans sp. BNC1 | 1 |
| Bacteria | Clostridium ljungdahlii DSM 13528 | 2 |
| Bacteria | Sphingomonadales bacterium GWF1_63_6 | 1 |
| Bacteria | Caulobacter sp. Root1455 | 1 |
| Bacteria | Acidovorax sp. 65-7 | 1 |
| Bacteria | Pseudomonas furukawaii | 1 |
| Bacteria | Butyrivibrio crossotus DSM 2876 | 1 |
| Bacteria | Zhengella mangrovi | 1 |
| Bacteria | Burkholderia multivorans CF2 | 1 |
| Bacteria | Pseudoalteromonas sp. J010 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_55_12 | 1 |
| Bacteria | Photorhabdus temperata subsp. temperata M1021 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_43_22 | 1 |
| Bacteria | Pseudoalteromonas lipolytica | 1 |
| Bacteria | Corynebacterium lipophiloflavum DSM 44291 | 1 |
| Bacteria | Streptomyces sp. Tu 6176 | 1 |
| Bacteria | Altererythrobacter sp. FM1 | 1 |
| Bacteria | Streptomyces niveus | 1 |
| Bacteria | Rheinheimera sp. A13L | 1 |
| Bacteria | Rhodobacterales bacterium 32-66-7 | 1 |
| Bacteria | Bacillus sp. VKPM B-3276 | 1 |
| Bacteria | Gordonia phthalatica | 1 |
| Bacteria | Vibrio cincinnatiensis DSM 19608 | 3 |
| Bacteria | Limnobacter sp. MED105 | 1 |
| Bacteria | Thioalbus denitrificans | 1 |
| Bacteria | Arenicella xantha | 1 |
| Bacteria | Acidaminococcus intestini RyC-MR95 | 1 |
| Bacteria | Lactobacillus gastricus DSM 16045 | 1 |
| Bacteria | Lactobacillus concavus DSM 17758 | 1 |
| Bacteria | Streptomyces sp. NWU339 | 1 |
| Bacteria | Neisseria sp. HMSC70E02 | 1 |
| Bacteria | Burkholderia pseudomallei K96243 | 1 |
| Bacteria | Ferrovum sp. 37-45-19 | 1 |
| Bacteria | Streptococcus pyogenes serotype M1 | 1 |
| Bacteria | Cellulomonas fimi ATCC 484 | 1 |
| Bacteria | Phenylobacterium zucineum | 1 |
| Bacteria | Ruegeria marisrubri | 1 |
| Bacteria | Pseudomonas graminis | 1 |
| Bacteria | Streptococcus phocae | 1 |
| Bacteria | Pseudomonas sihuiensis | 1 |
| Bacteria | Alteromonas sp. Nap_26 | 1 |
| Bacteria | Betaproteobacteria bacterium ADurb.Bin341 | 1 |
| Bacteria | Pseudoroseicyclus aestuarii | 1 |
| Bacteria | Agrobacterium sp. DSM 25558 | 1 |
| Bacteria | Anaeromassilibacillus sp. An200 | 1 |
| Bacteria | Sphingomonas endophytica | 1 |
| Bacteria | Bacillus velezensis FZB42 | 2 |
| Bacteria | Rhodobacterales bacterium 12-64-8 | 1 |
| Bacteria | candidate division bacterium WOR-3 4484_18 | 1 |
| Bacteria | Ralstonia solanacearum UW551 | 2 |
| Bacteria | Corynebacterium cystitidis DSM 20524 | 2 |
| Bacteria | Pseudoalteromonas lipolytica SCSIO 04301 | 1 |
| Bacteria | Lactobacillus mindensis DSM 14500 | 2 |
| Bacteria | Pseudoalteromonas citrea DSM 8771 | 1 |
| Bacteria | Geobacillus thermodenitrificans NG80-2 | 1 |
| Environmental samples | Ruminococcus sp. CAG:108 | 1 |
| Bacteria | Chloroflexi bacterium RBG_16_72_14 | 1 |
| Bacteria | Cupriavidus pinatubonensis JMP134 | 1 |
| Bacteria | Puniceibacterium antarcticum | 1 |
| Bacteria | Mixta theicola | 2 |
| Bacteria | Acidithiobacillales bacterium SM23_46 | 1 |
| Invertebrates | Dictyostelium discoideum | 1 |
| Bacteria | Desemzia incerta | 1 |
| Environmental samples | Acetobacter sp. CAG:267 | 1 |
| Bacteria | Pseudomonas savastanoi | 1 |
| Bacteria | Rhodobacterales bacterium RIFCSPHIGHO2_02_FULL_62_130 | 1 |
| Bacteria | Yangia sp. CCB-MM3 | 1 |
| Bacteria | Gallionellales bacterium CG_4_10_14_3_um_filter_54_96 | 1 |
| Bacteria | Aurantimonas sp. 22II-16-19i | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_65_10 | 1 |
| Bacteria | Hylemonella gracilis ATCC 19624 | 1 |
| Bacteria | Aeromonas salmonicida | 1 |
| Bacteria | Streptomyces virginiae | 1 |
| Bacteria | Neisseria meningitidis MC58 | 1 |
| Bacteria | Streptomyces sp. M41(2017) | 2 |
| Bacteria | Alcanivorax jadensis T9 | 1 |
| Environmental samples | Clostridium sp. CAG:299 | 1 |
| Bacteria | Staphylococcus sp. DORA_6_22 | 1 |
| Bacteria | Avibacterium gallinarum | 1 |
| Bacteria | Nitrosomonas sp. Nm84 | 1 |
| Bacteria | Polycyclovorans sp. | 1 |
| Bacteria | Lactobacillus sp. ESL0263 | 1 |
| Invertebrates | Aedes albopictus | 1 |
| Bacteria | Sphingobium sp. TCM1 | 1 |
| Bacteria | Rhodoferax ferrireducens T118 | 1 |
| Bacteria | Pseudomonas coronafaciens pv. oryzae str. 1_6 | 1 |
| Bacteria | Acholeplasma hippikon | 1 |
| Environmental samples | Clostridium sp. CAG:62 | 1 |
| Bacteria | Elusimicrobia bacterium HGW-Elusimicrobia-4 | 1 |
| Bacteria | Ignavibacteria bacterium GWA2_35_9 | 1 |
| Bacteria | Alcanivorax sp. Nap_24 | 1 |
| Bacteria | Mycoplasma gallisepticum WI01_2001.043-13-2P | 1 |
| Bacteria | Snodgrassella alvi wkB2 | 1 |
| Bacteria | Clostridium sp. AF27-2AA | 1 |
| Bacteria | Burkholderia singularis | 2 |
| Bacteria | Desulfamplus magnetovallimortis | 2 |
| Environmental samples | Collinsella sp. CAG:166 | 1 |
| Bacteria | Brevundimonas sp. AAP58 | 1 |
| Bacteria | Altererythrobacter sp. Ery12 | 1 |
| Bacteria | Treponema denticola H-22 | 1 |
| Bacteria | Acidovorax sp. MR-S7 | 2 |
| Environmental samples | Coprococcus eutactus CAG:665 | 1 |
| Bacteria | Leucothrix sp. IMCC9719 | 1 |
| Bacteria | Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 | 1 |
| Bacteria | Thalassotalea sp. PP2-459 | 1 |
| Bacteria | Rhodovulum sp. NI22 | 1 |
| Bacteria | Entomoplasma melaleucae | 1 |
| Bacteria | Roseiarcus fermentans | 1 |
| Bacteria | Oleispira sp. | 1 |
| Bacteria | Bifidobacterium bifidum PRL2010 | 1 |
| Bacteria | Clostridium novyi NT | 1 |
| Bacteria | Burkholderia multivorans ATCC 17616 | 1 |
| Bacteria | Hydrogenophilaceae bacterium CG1_02_62_390 | 1 |
| Bacteria | Olsenella sp. | 2 |
| Bacteria | Maritimibacter alkaliphilus HTCC2654 | 1 |
| Bacteria | Sphingomonas haloaromaticamans | 1 |
| Bacteria | Tateyamaria sp. ANG-S1 | 1 |
| Bacteria | Snodgrassella alvi SCGC AB-598-O02 | 1 |
| Bacteria | Bergeriella denitrificans | 1 |
| Bacteria | Blastomonas sp. RAC04 | 1 |
| Bacteria | Halopelagius inordinatus | 1 |
| Bacteria | Neisseria sp. GT4A_CT1 | 1 |
| Bacteria | Desulfobacteraceae bacterium 4572_130 | 1 |
| Bacteria | Myxococcales bacterium SG8_38 | 1 |
| Bacteria | Listeria monocytogenes serotype 1/2b | 1 |
| Bacteria | Azoarcus sp. BH72 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_44_11 | 1 |
| Bacteria | Photorhabdus laumondii subsp. clarkei | 1 |
| Bacteria | Hydrogenoanaerobacterium saccharovorans | 1 |
| Bacteria | Rhizobiales bacterium KCTC 52945 | 1 |
| Bacteria | Planctomycetes bacterium RIFCSPLOWO2_12_FULL_39_13 | 1 |
| Bacteria | Massilia armeniaca | 1 |
| Bacteria | Bhargavaea cecembensis DSE10 | 1 |
| Bacteria | Deltaproteobacteria bacterium ADurb.BinA179 | 1 |
| Bacteria | Novosphingobium kunmingense | 1 |
| Bacteria | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 | 1 |
| Bacteria | Legionella erythra | 1 |
| Bacteria | Ectothiorhodospira mobilis | 1 |
| Bacteria | Lactobacillus helveticus CIRM-BIA 953 | 1 |
| Bacteria | Streptomyces olivaceus | 1 |
| Bacteria | Blautia sp. OM07-19 | 1 |
| Bacteria | Alphaproteobacteria bacterium 62-8 | 1 |
| Bacteria | Moritella sp. PE36 | 1 |
| Bacteria | Beijerinckia sp. 28-YEA-48 | 1 |
| Bacteria | Neisseria sp. N177_16 | 1 |
| Environmental samples | uncultured microorganism | 1 |
| Bacteria | Rhodobacteraceae bacterium W635 | 1 |
| Bacteria | Nitrincola sp. A-D6 | 1 |
| Bacteria | Marinospirillum alkaliphilum DSM 21637 | 1 |
| Bacteria | Blautia sp. YL58 | 1 |
| Bacteria | Sphingomonas adhaesiva | 1 |
| Bacteria | Geoalkalibacter ferrihydriticus DSM 17813 | 1 |
| Bacteria | Mesorhizobium sp. LNHC252B00 | 1 |
| Bacteria | Basilea psittacipulmonis DSM 24701 | 1 |
| Bacteria | Nocardia sp. Root136 | 1 |
| Bacteria | Marinomonas gallaica | 1 |
| Vertebrates | Nestor notabilis | 1 |
| Bacteria | Streptomyces sp. Root1310 | 1 |
| Bacteria | Arthrobacter sp. QXT-31 | 1 |
| Bacteria | Lactococcus lactis subsp. cremoris A76 | 1 |
| Bacteria | Clostridium sp. DSM 8431 | 1 |
| Bacteria | Sphingomonas sp. 67-41 | 1 |
| Bacteria | Undibacterium sp. S11R28 | 1 |
| Vertebrates | Ambystoma tigrinum | 1 |
| Bacteria | Lutimaribacter saemankumensis | 1 |
| Bacteria | Sulfurifustis variabilis | 1 |
| Bacteria | Bordetella pertussis 2356847 | 1 |
| Bacteria | Chloroflexi bacterium 13_1_40CM_68_21 | 1 |
| Bacteria | Frankiales bacterium YIM 75000 | 2 |
| Bacteria | Pelagibacteraceae bacterium TMED13 | 1 |
| Bacteria | Bacillus cereus VD133 | 1 |
| Environmental samples | Roseburia sp. CAG:18 | 1 |
| Bacteria | Blastochloris sp. GI | 2 |
| Bacteria | Bosea sp. Leaf344 | 1 |
| Bacteria | Elusimicrobia bacterium RIFOXYB2_FULL_50_12 | 1 |
| Bacteria | Litorimicrobium taeanense | 1 |
| Bacteria | Cobetia sp. MM1IDA2H-1 | 1 |
| Bacteria | Marinobacter vinifirmus | 1 |
| Bacteria | Lachnospiraceae bacterium G41 | 1 |
| Bacteria | Lysobacter dokdonensis DS-58 | 1 |
| Bacteria | Stappia sp. 22II-S9-Z10 | 1 |
| Bacteria | Bacillus sp. MBGLi79 | 1 |
| Bacteria | Bosea sp. RCAM04685 | 1 |
| Bacteria | Nocardioides sp. Root614 | 1 |
| Bacteria | Alloactinosynnema iranicum | 1 |
| Bacteria | Clostridium beijerinckii NRRL B-598 | 1 |
| Bacteria | Enterococcus faecium EnGen0191 | 5 |
| Bacteria | Enterococcus sp. HSIEG1 | 19 |
| Bacteria | Rubinisphaera sp. | 3 |
| Bacteria | Lactobacillus gasseri | 6 |
| Bacteria | Histophilus somni 2336 | 3 |
| Vertebrates | Periophthalmus magnuspinnatus | 21 |
| Bacteria | Brevibacillus nitrificans | 1 |
| Bacteria | Klebsiella quasipneumoniae subsp. quasipneumoniae | 4 |
| Bacteria | Omnitrophica WOR_2 bacterium SM23_72 | 2 |
| Bacteria | Pseudomonas syringae pv. primulae | 1 |
| Bacteria | Escherichia coli KTE10 | 4 |
| Bacteria | Escherichia coli UMNF18 | 9 |
| Vertebrates | Mastacembelus armatus | 27 |
| Bacteria | Lactobacillus casei | 30 |
| Vertebrates | Amazona aestiva | 11 |
| Bacteria | Roseomonas rosea | 2 |
| Bacteria | Vibrio ruber DSM 16370 | 4 |
| Bacteria | Roseburia hominis | 4 |
| Bacteria | Alicyclobacillus tengchongensis | 2 |
| Bacteria | Corynebacterium deserti GIMN1.010 | 2 |
| Bacteria | Pseudomonas sp. MF6396 | 1 |
| Bacteria | Mycoplasma pullorum | 1 |
| Bacteria | Bacillus vireti LMG 21834 | 8 |
| Bacteria | Edwardsiella tarda | 6 |
| Bacteria | Spirochaetes bacterium GWF1_31_7 | 5 |
| Vertebrates | Tetraodon nigroviridis | 40 |
| Bacteria | Rhizobium etli CIAT 652 | 1 |
| Bacteria | Caryophanon tenue | 1 |
| Bacteria | Enterococcus faecium EnGen0020 | 5 |
| Bacteria | Veillonella sp. AS16 | 2 |
| Bacteria | Vibrio scophthalmi | 13 |
| Bacteria | Lactobacillus casei 21/1 | 12 |
| Vertebrates | Poecilia reticulata | 44 |
| Bacteria | Vibrionales bacterium SWAT-3 | 2 |
| Bacteria | Streptococcus minor | 8 |
| Bacteria | Rodentibacter myodis | 3 |
| Bacteria | Streptococcus iniae IUSA1 | 9 |
| Bacteria | Enterococcus faecalis 918 | 12 |
| Bacteria | Lentibacillus amyloliquefaciens | 10 |
| Bacteria | Verrucomicrobia bacterium | 9 |
| Bacteria | Sphingobium cloacae | 1 |
| Bacteria | Vibrio parahaemolyticus AQ3810 | 9 |
| Bacteria | Candidatus Rubidus massiliensis | 2 |
| Bacteria | Anoxybacillus ayderensis | 3 |
| Bacteria | Bartonella tribocorum CIP 105476 | 2 |
| Bacteria | Achromobacter sp. | 10 |
| Bacteria | Leptotrichia sp. OH3620_COT-345 | 15 |
| Vertebrates | Gopherus agassizii | 28 |
| Bacteria | Chlamydia psittaci 06-1683 | 1 |
| Bacteria | Enterobacter sp. EC-NT1 | 3 |
| Bacteria | Leifsonia sp. | 5 |
| Bacteria | Listeria aquatica FSL S10-1188 | 13 |
| Bacteria | Domibacillus epiphyticus | 3 |
| Bacteria | bacterium HR33 | 3 |
| Bacteria | Paenibacillus macerans | 17 |
| Bacteria | Garciella nitratireducens DSM 15102 | 9 |
| Bacteria | Roseomonas rhizosphaerae | 2 |
| Vertebrates | Danio rerio | 39 |
| Invertebrates | Soboliphyme baturini | 6 |
| Bacteria | Methylobacterium sp. XJLW | 2 |
| Bacteria | Enterococcus sp. 4G2_DIV0659 | 2 |
| Bacteria | Hydrogenophilales bacterium 28-61-11 | 1 |
| Bacteria | Bacillus sp. AFS073361 | 8 |
| Bacteria | [Propionibacterium] humerusii P08 | 4 |
| Bacteria | Listeria monocytogenes serotype 4b str. LL195 | 3 |
| Bacteria | Opitutae bacterium | 9 |
| Bacteria | Candidatus Arthromitus sp. SFB-rat-Yit | 6 |
| Bacteria | Staphylococcus aureus subsp. aureus MN8 | 3 |
| Bacteria | Halanaerobium congolense | 10 |
| Bacteria | Oceanobacillus iheyensis HTE831 | 8 |
| Bacteria | Vibrio mangrovi | 6 |
| Bacteria | Mycoplasma agalactiae 14628 | 1 |
| Bacteria | Enterococcus faecalis ERV81 | 2 |
| Bacteria | Klebsiella pneumoniae IS53 | 8 |
| Invertebrates | Glossina fuscipes fuscipes | 3 |
| Bacteria | Ponticaulis sp. | 3 |
| Bacteria | Azospirillum brasilense Sp245 | 4 |
| Bacteria | Citrobacter sp. L55 | 2 |
| Bacteria | Ruminococcaceae bacterium CPB6 | 6 |
| Bacteria | Vibrio harveyi | 2 |
| Bacteria | [Clostridium] cocleatum | 6 |
| Bacteria | Clostridiales bacterium 1_7_47FAA | 12 |
| Bacteria | Anaerococcus prevotii DSM 20548 | 2 |
| Bacteria | Streptococcus suis | 16 |
| Bacteria | Enterococcus pallens ATCC BAA-351 | 64 |
| Bacteria | Methylorubrum populi | 2 |
| Bacteria | candidate division WOR_3 bacterium SM23_60 | 4 |
| Bacteria | Rhizobium sp. AC27/96 | 1 |
| Bacteria | Enterococcus faecium Com15 | 5 |
| Bacteria | Bacillus halodurans C-125 | 7 |
| Bacteria | Mycolicibacterium fallax | 1 |
| Bacteria | Subtercola boreus | 3 |
| Bacteria | Corynebacterium minutissimum | 2 |
| Bacteria | Klebsiella pneumoniae ISC21 | 6 |
| Bacteria | Actinobacteria bacterium | 4 |
| Bacteria | Sutterellaceae bacterium | 1 |
| Bacteria | Paenibacillus naphthalenovorans | 2 |
| Bacteria | Thermoactinomyces vulgaris | 5 |
| Bacteria | Olsenella sp. KH1P3 | 8 |
| Bacteria | Halobacillus mangrovi | 8 |
| Bacteria | Lactobacillus sucicola DSM 21376 = JCM 15457 | 3 |
| Bacteria | Paenibacillus sp. Soil787 | 3 |
| Bacteria | Methylophaga aminisulfidivorans MP | 2 |
| Primates | Papio anubis | 39 |
| Bacteria | Vibrio sp. 16 | 2 |
| Bacteria | Citrobacter pasteurii | 4 |
| Bacteria | Brachybacterium faecium DSM 4810 | 3 |
| Bacteria | Escherichia coli Xuzhou21 | 11 |
| Bacteria | Corynebacterium glutamicum ATCC 13032 | 2 |
| Bacteria | Escherichia coli H736 | 7 |
| Environmental samples | Eubacterium sp. CAG:86 | 1 |
| Bacteria | Escherichia coli MS 21-1 | 5 |
| Bacteria | Pontibacillus yanchengensis Y32 | 13 |
| Bacteria | Intrasporangium calvum DSM 43043 | 1 |
| Bacteria | Photobacterium carnosum | 1 |
| Bacteria | Klebsiella pneumoniae | 52 |
| Bacteria | Elusimicrobia bacterium GWC2_64_44 | 2 |
| Bacteria | Variovorax sp. B4 | 1 |
| Bacteria | Streptococcus sp. BCA20 | 3 |
| Environmental samples | Firmicutes bacterium CAG:466 | 3 |
| Bacteria | Pantoea sp. AS-PWVM4 | 3 |
| Primates | Saimiri boliviensis boliviensis | 41 |
| Bacteria | Ferriphaselus amnicola | 1 |
| Bacteria | Oceanibaculum indicum P24 | 1 |
| Bacteria | Pseudoruegeria sp. SK021 | 1 |
| Bacteria | Bacillus sp. OV166 | 4 |
| Bacteria | Enterococcus hermanniensis | 9 |
| Bacteria | Aggregatibacter aphrophilus ATCC 33389 | 3 |
| Bacteria | Methylibium sp. T29 | 1 |
| Bacteria | Conservatibacter flavescens | 5 |
| Invertebrates | Trichinella sp. T9 | 28 |
| Bacteria | Fusobacterium necrophorum subsp. funduliforme Fnf 1007 | 3 |
| Bacteria | bacterium (Candidatus Stahlbacteria) CG08_land_8_20_14_0_20_40_26 | 5 |
| Bacteria | Erwinia persicina | 9 |
| Bacteria | Halobacillus dabanensis | 5 |
| Invertebrates | Toxocara canis | 8 |
| Mammals | Ovis aries | 13 |
| Bacteria | Leptospira borgpetersenii serovar Hardjo-bovis | 1 |
| Bacteria | Escherichia coli W | 5 |
| Bacteria | Vibrio furnissii NCTC 11218 | 6 |
| Bacteria | Bifidobacterium tsurumiense | 3 |
| Bacteria | Brachybacterium faecium | 12 |
| Vertebrates | Manacus vitellinus | 5 |
| Bacteria | Brochothrix campestris FSL F6-1037 | 7 |
| Bacteria | Klebsiella pneumoniae IS22 | 10 |
| Bacteria | Sphingomonas panacis | 1 |
| Bacteria | Sandaracinus amylolyticus | 2 |
| Bacteria | Paenibacillus sp. FSL R7-277 | 4 |
| Bacteria | Olsenella sp. An188 | 6 |
| Bacteria | Lactobacillus rhamnosus | 21 |
| Bacteria | Kluyvera cryocrescens | 13 |
| Bacteria | Burkholderia gladioli BSR3 | 2 |
| Bacteria | Porphyrobacter neustonensis | 1 |
| Bacteria | Rhodobacter ovatus | 1 |
| Bacteria | Thalassotalea euphylliae | 1 |
| Bacteria | Vibrio sp. 10N.286.49.C2 | 11 |
| Bacteria | [Butyribacterium] methylotrophicum | 5 |
| Vertebrates | Dicentrarchus labrax | 3 |
| Bacteria | Caloranaerobacter azorensis H53214 | 4 |
| Bacteria | Streptomyces albulus PD-1 | 1 |
| Bacteria | Bifidobacterium bifidum | 4 |
| Bacteria | Anoxybacillus sp. B7M1 | 8 |
| Bacteria | Raoultella planticola | 19 |
| Invertebrates | Fopius arisanus | 3 |
| Bacteria | Enterobacter hormaechei ATCC 49162 | 5 |
| Bacteria | Streptococcus sp. DD12 | 3 |
| Bacteria | Leptotrichia hofstadii F0254 | 8 |
| Bacteria | Sphingomonadales bacterium 28-64-96 | 1 |
| Bacteria | Shewanella amazonensis SB2B | 1 |
| Bacteria | Shigella dysenteriae | 14 |
| Bacteria | candidate division WOR_3 bacterium SM23_42 | 4 |
| Bacteria | Rhodobacterales bacterium 17-64-5 | 1 |
| Bacteria | Tetragenococcus halophilus | 5 |
| Bacteria | Fusobacterium periodonticum ATCC 33693 | 2 |
| Bacteria | Photobacterium jeanii | 6 |
| Bacteria | Pectobacterium polaris | 1 |
| Bacteria | Ewingella americana | 5 |
| Bacteria | Thermogemmatispora tikiterensis | 3 |
| Invertebrates | Glossina morsitans morsitans | 2 |
| Bacteria | Morococcus cerebrosus | 1 |
| Bacteria | Staphylococcus argenteus | 5 |
| Bacteria | Caloramator quimbayensis | 9 |
| Primates | Cebus capucinus imitator | 34 |
| Bacteria | Candidatus Cloacimonas sp. 4484_140 | 4 |
| Bacteria | Enterococcus faecalis TX0411 | 7 |
| Bacteria | Polynucleobacter sp. QLW-P1DATA-2 | 1 |
| Bacteria | Lactobacillus plantarum subsp. argentoratensis | 1 |
| Bacteria | Bacillus ginsengihumi | 12 |
| Bacteria | Bacillus megaterium | 17 |
| Bacteria | Corynebacterium vitaeruminis DSM 20294 | 2 |
| Bacteria | Escherichia coli O25b:H4 | 3 |
| Bacteria | Phycisphaeraceae bacterium | 8 |
| Bacteria | Chromatiaceae bacterium | 1 |
| Bacteria | Geotoga petraea | 1 |
| Bacteria | Lysinibacillus sp. AC-3 | 1 |
| Bacteria | Caldibacillus debilis GB1 | 1 |
| Bacteria | Klebsiella pneumoniae 30660/NJST258_1 | 8 |
| Bacteria | Phycisphaerae bacterium | 24 |
| Vertebrates | Amphilophus citrinellus | 25 |
| Bacteria | Pseudarthrobacter phenanthrenivorans Sphe3 | 4 |
| Bacteria | Staphylococcus delphini | 8 |
| Bacteria | Planococcus rifietoensis | 4 |
| Bacteria | Citrobacter rodentium | 11 |
| Bacteria | Proteiniclasticum ruminis | 7 |
| Bacteria | Opitutales bacterium TMED207 | 1 |
| Bacteria | Streptococcus gordonii str. Challis substr. CH1 | 5 |
| Bacteria | Clostridiales bacterium CHKCI001 | 5 |
| Invertebrates | Trichinella spiralis | 10 |
| Bacteria | Staphylococcus sciuri subsp. rodentium | 3 |
| Bacteria | Pelosinus sp. UFO1 | 19 |
| Bacteria | Aliivibrio fischeri | 5 |
| Bacteria | Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 | 4 |
| Bacteria | Aerococcus christensenii | 10 |
| Vertebrates | Callipepla squamata | 9 |
| Bacteria | Vibrio metschnikovii | 6 |
| Bacteria | Desulfatibacillum alkenivorans AK-01 | 3 |
| Bacteria | Citrobacter farmeri | 3 |
| Bacteria | Clostridium sp. C105KSO15 | 8 |
| Bacteria | Thiobacillus sp. GWE1_62_9 | 1 |
| Bacteria | Serratia liquefaciens | 5 |
| Bacteria | Omnitrophica bacterium RIFCSPLOWO2_12_FULL_45_13 | 3 |
| Bacteria | Corynebacterium imitans | 2 |
| Bacteria | Hafnia alvei FB1 | 11 |
| Bacteria | Micavibrio sp. | 6 |
| Bacteria | Sphingomonas sp. RIT328 | 1 |
| Bacteria | Thiotrichales bacterium HS_08 | 1 |
| Bacteria | Rhizobium sp. H41 | 1 |
| Bacteria | Candidatus Cloacimonas sp. SDB | 6 |
| Bacteria | Candidatus Schekmanbacteria bacterium RBG_13_48_7 | 3 |
| Bacteria | Halomonas sp. JB380 | 2 |
| Bacteria | Lactobacillus acetotolerans | 7 |
| Bacteria | Rhodoplanes piscinae | 1 |
| Bacteria | Escherichia coli TA054 | 5 |
| Bacteria | Clostridium baratii | 3 |
| Bacteria | Faecalibacterium prausnitzii | 10 |
| Bacteria | Clostridium uliginosum | 7 |
| Bacteria | Planctomycetaceae bacterium | 39 |
| Bacteria | Enterococcus casseliflavus | 14 |
| Bacteria | Carnobacterium sp. AT7 | 4 |
| Bacteria | Staphylococcus intermedius NCTC 11048 | 2 |
| Bacteria | Bacillus licheniformis | 8 |
| Mammals | Odobenus rosmarus divergens | 17 |
| Bacteria | Pseudomonas sp. M47T1 | 3 |
| Bacteria | Mesorhizobium sp. L2C084A000 | 2 |
| Bacteria | Salimicrobium halophilum | 6 |
| Bacteria | Pantoea latae | 4 |
| Bacteria | Bartonella vinsonii | 2 |
| Bacteria | Enterococcus faecalis TX0309B | 9 |
| Primates | Pongo abelii | 20 |
| Bacteria | Streptomyces peucetius subsp. caesius ATCC 27952 | 2 |
| Bacteria | Mycobacteroides abscessus subsp. abscessus | 35 |
| Bacteria | Listeria grayi | 8 |
| Invertebrates | Schistocephalus solidus | 14 |
| Bacteria | Enterobacter ludwigii | 10 |
| Bacteria | Bacillus sp. Y1 | 11 |
| Bacteria | Brachyspira intermedia PWS/A | 1 |
| Bacteria | Vibrio galatheae | 3 |
| Bacteria | Selenomonas sp. oral taxon 126 | 3 |
| Bacteria | Gracilibacillus boraciitolerans JCM 21714 | 6 |
| Bacteria | Borrelia duttonii Ly | 3 |
| Bacteria | Candidatus Magnetomorum sp. HK-1 | 2 |
| Bacteria | Photobacterium profundum SS9 | 7 |
| Bacteria | Streptomyces hygroscopicus | 2 |
| Bacteria | Lactobacillus secaliphilus | 3 |
| Bacteria | Oenococcus oeni AWRIB429 | 6 |
| Bacteria | Methylobacterium sp. Leaf104 | 1 |
| Bacteria | Kingella negevensis | 1 |
| Bacteria | Cytophagaceae bacterium | 1 |
| Bacteria | Lactobacillus equi DPC 6820 | 6 |
| Bacteria | Candidatus Accumulibacter sp. BA-94 | 1 |
| Bacteria | Vibrio atlanticus | 2 |
| Bacteria | Lihuaxuella thermophila | 7 |
| Bacteria | Rathayibacter sp. Leaf294 | 1 |
| Bacteria | Lactobacillus apis | 5 |
| Bacteria | Halomonas sp. 1513 | 2 |
| Bacteria | Lactobacillus casei DSM 20011 = JCM 1134 | 11 |
| Bacteria | Lactobacillus paucivorans | 8 |
| Bacteria | Streptococcus uberis | 7 |
| Bacteria | Salmonella enterica subsp. enterica serovar Inverness str. R8-3668 | 3 |
| Bacteria | Clostridium oryzae | 3 |
| Bacteria | Lactobacillus fermentum 28-3-CHN | 5 |
| Bacteria | Neisseria gonorrhoeae NCCP11945 | 1 |
| Bacteria | Enterobacter sp. 10-1 | 5 |
| Bacteria | Legionella clemsonensis | 1 |
| Bacteria | Anaerococcus lactolyticus ATCC 51172 | 7 |
| Bacteria | Dethiosulfatarculus sandiegensis | 3 |
| Bacteria | Pseudooceanicola marinus | 1 |
| Bacteria | Paracoccus solventivorans | 1 |
| Bacteria | Lactobacillus ginsenosidimutans | 3 |
| Bacteria | Lentisphaerae bacterium GWF2_44_16 | 6 |
| Bacteria | Chromohalobacter salexigens | 1 |
| Bacteria | Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_51_24 | 1 |
| Bacteria | Pantoea rodasii | 4 |
| Bacteria | Aeromonas sp. RU39B | 6 |
| Bacteria | Brevinema andersonii | 4 |
| Bacteria | Brachyspira pilosicoli WesB | 4 |
| Invertebrates | Phreagena okutanii | 4 |
| Bacteria | Spirochaetes bacterium ADurb.Bin269 | 5 |
| Bacteria | Streptomyces griseochromogenes | 2 |
| Bacteria | Clostridium thermopalmarium DSM 5974 | 3 |
| Bacteria | Enterococcus saccharolyticus 30_1 | 11 |
| Bacteria | Cutibacterium avidum | 4 |
| Bacteria | Vibrio sinaloensis DSM 21326 | 5 |
| Bacteria | Novosphingobium sp. AAP93 | 1 |
| Bacteria | Devosia soli | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar 4,12:i:- | 10 |
| Bacteria | Streptomyces sp. WMMB 322 | 2 |
| Bacteria | Pseudomonas sp. ATCC 13867 | 1 |
| Bacteria | Rhizobiales bacterium 63-22 | 2 |
| Bacteria | Actinomyces sp. oral taxon 414 | 2 |
| Bacteria | Streptococcus gallolyticus subsp. gallolyticus TX20005 | 2 |
| Bacteria | Klebsiella sp. HMSC16C06 | 3 |
| Bacteria | Treponema pallidum subsp. pertenue | 2 |
| Bacteria | Brenneria nigrifluens | 7 |
| Bacteria | Citrobacter amalonaticus Y19 | 4 |
| Bacteria | Candidatus Burkholderia brachyanthoides | 1 |
| Bacteria | Thiomonas intermedia K12 | 2 |
| Bacteria | Streptococcus sp. oral taxon 056 str. F0418 | 5 |
| Bacteria | Lactococcus plantarum | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Dublin | 4 |
| Bacteria | Staphylococcus kloosii | 5 |
| Bacteria | Enterococcus casseliflavus ATCC 12755 | 8 |
| Bacteria | Selenomonas sp. oral taxon 136 | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Muenchen | 6 |
| Bacteria | Caviibacterium pharyngocola | 3 |
| Bacteria | Candidatus Schekmanbacteria bacterium GWA2_38_11 | 1 |
| Bacteria | Pantoea sp. 3.5.1 | 2 |
| Bacteria | Lactobacillus plantarum WCFS1 | 12 |
| Bacteria | Caballeronia choica | 1 |
| Bacteria | Mycoplasma cynos | 2 |
| Bacteria | Aerococcus urinaeequi | 6 |
| Bacteria | Halogeometricum pallidum JCM 14848 | 1 |
| Bacteria | Ancylobacter rudongensis | 1 |
| Bacteria | Photobacterium gaetbulicola Gung47 | 10 |
| Bacteria | Planctomycetaceae bacterium SCGC AG-212-D15 | 1 |
| Bacteria | Pelobacter carbinolicus DSM 2380 | 1 |
| Vertebrates | Egretta garzetta | 6 |
| Bacteria | Saccharopolyspora shandongensis | 1 |
| Bacteria | Clostridium colicanis DSM 13634 | 6 |
| Bacteria | Aerococcus urinae ACS-120-V-Col10a | 10 |
| Bacteria | Virgibacillus chiguensis | 11 |
| Bacteria | Bacillus sp. MBGLi97 | 2 |
| Bacteria | Labedella endophytica | 4 |
| Bacteria | bacterium BMS3Bbin04 | 2 |
| Bacteria | Polynucleobacter asymbioticus QLW-P1DMWA-1 | 1 |
| Bacteria | [Clostridium] sphenoides | 5 |
| Bacteria | Escherichia coli 907672 | 4 |
| Bacteria | Candidatus Omnitrophica bacterium 4484_49 | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED1 | 1 |
| Bacteria | Mycoplasma mycoides subsp. mycoides | 2 |
| Bacteria | Pelagibacterium sp. SCN 63-126 | 1 |
| Bacteria | Lachnoclostridium sp. An131 | 4 |
| Bacteria | Nereida ignava | 3 |
| Bacteria | Vibrio metoecus | 3 |
| Bacteria | Microbacterium esteraromaticum | 2 |
| Bacteria | Streptococcus parauberis | 6 |
| Bacteria | Escherichia coli 2-005-03_S4_C3 | 6 |
| Bacteria | Phreatobacter cathodiphilus | 1 |
| Bacteria | Sphingomonas laterariae | 1 |
| Bacteria | Streptomyces collinus Tu 365 | 1 |
| Bacteria | Amycolatopsis australiensis | 1 |
| Bacteria | Escherichia coli 908573 | 4 |
| Bacteria | Olsenella sp. HMSC062G07 | 11 |
| Bacteria | Spiroplasma sp. NBRC 100390 | 3 |
| Bacteria | Clostridium septicum | 2 |
| Bacteria | Desulfovibrio sp. S3730MH75 | 1 |
| Bacteria | Collinsella sp. An271 | 4 |
| Bacteria | Oceanococcus atlanticus | 1 |
| Bacteria | Rhizobium sp. Root564 | 1 |
| Bacteria | Treponema porcinum | 4 |
| Bacteria | Ruminococcus sp. DSM 100440 | 2 |
| Bacteria | Cupriavidus sp. USMAA2-4 | 1 |
| Bacteria | Streptococcus henryi | 4 |
| Bacteria | Serratia oryzae | 1 |
| Bacteria | Vibrio splendidus | 4 |
| Invertebrates | Nematostella vectensis | 3 |
| Bacteria | Pantoea sp. PSNIH5 | 5 |
| Bacteria | Motiliproteus coralliicola | 1 |
| Bacteria | Citrobacter freundii complex sp. CFNIH2 | 1 |
| Bacteria | Planococcus donghaensis MPA1U2 | 2 |
| Bacteria | Desulfovibrio hydrothermalis AM13 = DSM 14728 | 1 |
| Bacteria | Anoxybacillus flavithermus | 7 |
| Bacteria | Magnetospirillum marisnigri | 1 |
| Bacteria | actinobacterium acAMD-5 | 1 |
| Bacteria | Escherichia coli S88 | 4 |
| Bacteria | Trabulsiella odontotermitis | 3 |
| Bacteria | Kocuria polaris | 8 |
| Bacteria | Coraliomargarita sp. TMED73 | 1 |
| Bacteria | Sinorhizobium sp. GL2 | 1 |
| Bacteria | Alphaproteobacteria bacterium | 13 |
| Bacteria | Robbsia andropogonis | 1 |
| Bacteria | Streptomyces sp. MP131-18 | 1 |
| Bacteria | Candidatus Accumulibacter sp. 66-26 | 2 |
| Bacteria | Pantoea ananatis LMG 20103 | 10 |
| Bacteria | Vibrio parahaemolyticus 901128 | 1 |
| Bacteria | Leptotrichia sp. oral taxon 225 str. F0581 | 3 |
| Bacteria | Microbacterium sp. SCN 70-27 | 3 |
| Mammals | Lynx pardinus | 2 |
| Bacteria | Sulfobacillus acidophilus DSM 10332 | 1 |
| Bacteria | Halocella sp. SP3-1 | 8 |
| Bacteria | Brevundimonas subvibrioides ATCC 15264 | 1 |
| Bacteria | Clostridioides difficile R20291 | 7 |
| Bacteria | candidate division Zixibacteria bacterium RBG_16_43_9 | 1 |
| Bacteria | Enterococcus faecium TX1337RF | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 | 5 |
| Bacteria | Erysipelotrichaceae bacterium AM07-35-1 | 11 |
| Bacteria | Staphylococcus epidermidis RP62A | 3 |
| Bacteria | Gardnerella vaginalis 00703Dmash | 1 |
| Bacteria | Arthrobacter sp. Hiyo8 | 2 |
| Bacteria | Vibrio quintilis | 6 |
| Bacteria | Spiroplasma endosymbiont of Glossina fuscipes fuscipes | 1 |
| Bacteria | Alicyclobacillus vulcanalis | 3 |
| Bacteria | Candidatus Actinomarina minuta | 1 |
| Bacteria | Streptomyces sp. SA15 | 2 |
| Bacteria | Neisseria meningitidis LNP21362 | 1 |
| Bacteria | Pseudomonas plecoglossicida | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_71_12 | 1 |
| Bacteria | Kocuria palustris PEL | 2 |
| Bacteria | Shigella dysenteriae Sd197 | 6 |
| Bacteria | Deltaproteobacteria bacterium ADurb.BinA014 | 1 |
| Bacteria | Spirochaeta sp. LUC14_002_19_P3 | 4 |
| Bacteria | Paenibacillus sp. Y412MC10 | 7 |
| Bacteria | Methyloversatilis sp. RAC08 | 1 |
| Bacteria | Pseudoalteromonas sp. H105 | 1 |
| Bacteria | Rhodocyclaceae bacterium | 2 |
| Bacteria | Pseudovibrio axinellae | 2 |
| Bacteria | Luteococcus japonicus LSP_Lj1 | 4 |
| Bacteria | Murinocardiopsis flavida | 3 |
| Bacteria | [Propionibacterium] humerusii HL044PA1 | 5 |
| Bacteria | Bifidobacterium breve MCC 1340 | 1 |
| Bacteria | marine actinobacterium PHSC20C1 | 5 |
| Bacteria | Salsuginibacillus halophilus | 3 |
| Bacteria | Marmoricola pocheonensis | 1 |
| Bacteria | Glaesserella parasuis str. Nagasaki | 2 |
| Bacteria | Aliifodinibius roseus | 3 |
| Bacteria | Streptococcus azizii | 3 |
| Bacteria | Eikenella sp. NML02-A-017 | 1 |
| Bacteria | Gallionellales bacterium RIFCSPLOWO2_02_60_31 | 1 |
| Bacteria | Verrucomicrobia bacterium ADurb.Bin345 | 8 |
| Bacteria | Listeria monocytogenes CFSAN002202 | 5 |
| Bacteria | Lactobacillus silagei JCM 19001 | 2 |
| Bacteria | Desulfomicrobium baculatum DSM 4028 | 2 |
| Bacteria | Azoarcus communis | 1 |
| Bacteria | Streptomyces sp. 61 | 1 |
| Bacteria | Dendrosporobacter quercicolus | 3 |
| Bacteria | SAR116 cluster bacterium | 3 |
| Bacteria | Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_42_8 | 1 |
| Bacteria | Enterobacter cancerogenus ATCC 35316 | 7 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_16_63_16 | 1 |
| Bacteria | Escherichia coli 1-392-07_S4_C3 | 4 |
| Bacteria | Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_43_6 | 1 |
| Invertebrates | Elaeophora elaphi | 5 |
| Bacteria | Photobacterium leiognathi subsp. mandapamensis | 1 |
| Bacteria | Shuttleworthia satelles DSM 14600 | 3 |
| Bacteria | Rhizobiales bacterium NRL2 | 1 |
| Invertebrates | Ceratitis capitata | 4 |
| Bacteria | Staphylococcus schleiferi subsp. schleiferi | 1 |
| Bacteria | candidate division TA06 bacterium ADurb.Bin131 | 1 |
| Bacteria | Rothia kristinae | 2 |
| Bacteria | Pararhodospirillum photometricum DSM 122 | 2 |
| Bacteria | Plantibacter sp. YR521 | 1 |
| Bacteria | Desulfovibrio vulgaris str. Hildenborough | 1 |
| Bacteria | Sphingomonas paucimobilis | 5 |
| Bacteria | Epulopiscium sp. Nele67-Bin004 | 4 |
| Bacteria | Desulfobacca sp. 4484_104 | 1 |
| Bacteria | Enterococcus hirae | 9 |
| Bacteria | Lactococcus lactis subsp. lactis Il1403 | 3 |
| Bacteria | Spiroplasma syrphidicola EA-1 | 2 |
| Bacteria | Curtobacterium sp. MCBD17_040 | 2 |
| Bacteria | Noviherbaspirillum sp. K1S02-23 | 1 |
| Bacteria | Microvirga ossetica | 1 |
| Invertebrates | Trichinella papuae | 20 |
| Bacteria | Streptococcus sanguinis SK36 | 2 |
| Bacteria | Mesorhizobium prunaredense | 1 |
| Bacteria | Hafnia alvei ATCC 51873 | 3 |
| Bacteria | Brachyspira pilosicoli P43/6/78 | 1 |
| Bacteria | Albidiferax sp. OV413 | 1 |
| Bacteria | Marinobacter sp. AC-23 | 1 |
| Bacteria | Streptomyces sp. GSSD-12 | 2 |
| Bacteria | Enterococcus faecalis ERV116 | 2 |
| Bacteria | Bacillus subtilis | 8 |
| Bacteria | enodsymbiont of Escarpia spicata | 2 |
| Bacteria | Roseospirillum parvum | 1 |
| Bacteria | Pseudomonas sp. 1-7 | 2 |
| Bacteria | Youngiibacter fragilis 232.1 | 4 |
| Bacteria | Paludifilum halophilum | 6 |
| Vertebrates | Rana catesbeiana | 8 |
| Bacteria | Alicycliphilus denitrificans | 1 |
| Bacteria | Anaeromyxobacter dehalogenans 2CP-C | 2 |
| Bacteria | Citrobacter sp. MGH109 | 2 |
| Bacteria | Azospirillum brasilense | 2 |
| Bacteria | Rugamonas rubra | 1 |
| Bacteria | Parachlamydiales bacterium | 2 |
| Invertebrates | Drosophila sechellia | 2 |
| Bacteria | Enterococcus faecalis ATCC 6055 | 6 |
| Bacteria | Salmonella enterica subsp. enterica serovar Litchfield | 6 |
| Bacteria | Staphylococcus sp. MB371 | 6 |
| Bacteria | Calditerrivibrio nitroreducens | 3 |
| Bacteria | Cedecea neteri | 3 |
| Bacteria | Rhodococcus maanshanensis | 1 |
| Bacteria | Lactobacillus mellis | 2 |
| Bacteria | Streptomyces armeniacus | 2 |
| Bacteria | Acinetobacter baumannii AYE | 2 |
| Bacteria | Arthrobacter sp. ZXY-2 | 3 |
| Bacteria | Pseudomonas taeanensis MS-3 | 2 |
| Bacteria | Actinomyces succiniciruminis | 2 |
| Bacteria | Enterobacter sp. CC120223-11 | 5 |
| Bacteria | Phycisphaera sp. TMED9 | 3 |
| Bacteria | Xanthomonas translucens pv. poae | 2 |
| Bacteria | Lactobacillus kalixensis DSM 16043 | 4 |
| Bacteria | Pseudomonas protegens | 2 |
| Bacteria | Candidatus Cloacimonetes bacterium 4572_65 | 5 |
| Bacteria | Gemmata obscuriglobus | 1 |
| Bacteria | Bacillus clausii | 8 |
| Bacteria | Enterococcus faecium 13.SD.W.09 | 3 |
| Bacteria | Omnitrophica bacterium RBG_13_46_9 | 4 |
| Invertebrates | Rhipicephalus pulchellus | 3 |
| Bacteria | Streptomyces sp. 769 | 2 |
| Bacteria | Brucella sp. F5/99 | 1 |
| Bacteria | Frondihabitans sp. Leaf304 | 2 |
| Environmental samples | Roseburia sp. CAG:303 | 1 |
| Bacteria | Rhodospirillum centenum SW | 1 |
| Bacteria | Primorskyibacter insulae | 1 |
| Bacteria | Pantoea agglomerans | 7 |
| Bacteria | Paracoccus versutus | 1 |
| Bacteria | Chloroflexus aurantiacus J-10-fl | 1 |
| Bacteria | Pseudomonas pseudoalcaligenes CECT 5344 | 2 |
| Bacteria | Citrobacter rodentium ICC168 | 11 |
| Bacteria | Yersinia enterocolitica | 6 |
| Bacteria | Mannheimia haemolytica | 6 |
| Bacteria | Pantoea sp. ICBG 1758 | 1 |
| Bacteria | Paenibacillus xylanexedens | 5 |
| Bacteria | Endozoicomonas sp. (ex Bugula neritina AB1) | 4 |
| Bacteria | Actinomyces ruminicola | 6 |
| Bacteria | Cutibacterium acnes SK137 | 5 |
| Bacteria | Enterococcus faecalis TX0309A | 9 |
| Environmental samples | invertebrate metagenome | 4 |
| Bacteria | Gemmatimonadetes bacterium 21-71-4 | 3 |
| Bacteria | Paramesorhizobium deserti | 2 |
| Bacteria | Acetobacterium sp. | 1 |
| Bacteria | Escherichia coli 2-005-03_S4_C2 | 6 |
| Bacteria | Corynebacterium sp. HMSC08F01 | 1 |
| Bacteria | Pseudomonas parafulva | 2 |
| Bacteria | Pseudomonas oryzae | 2 |
| Bacteria | Candidatus Firestonebacteria bacterium RIFOXYC2_FULL_39_67 | 2 |
| Bacteria | Vibrio diabolicus | 2 |
| Bacteria | Streptomyces coelicoflavus ZG0656 | 1 |
| Bacteria | Thermoanaerobacter kivui | 4 |
| Invertebrates | Caenorhabditis latens | 3 |
| Bacteria | Stenotrophomonas maltophilia | 4 |
| Bacteria | Bartonella sp. DB5-6 | 1 |
| Bacteria | Prosthecochloris sp. CIB 2401 | 1 |
| Bacteria | Thermoanaerobaculum aquaticum | 4 |
| Bacteria | Enterococcus gallinarum EG2 | 10 |
| Bacteria | Anaerofustis stercorihominis DSM 17244 | 16 |
| Bacteria | Salmonella enterica subsp. enterica serovar Karamoja | 4 |
| Bacteria | Gemmatimonadetes bacterium 13_1_40CM_66_11 | 3 |
| Bacteria | bacterium 1xD42-67 | 2 |
| Bacteria | Salimicrobium flavidum | 3 |
| Bacteria | Vibrio mimicus VM603 | 5 |
| Bacteria | Treponema sp. JC4 | 5 |
| Bacteria | Enterococcus ureilyticus | 11 |
| Bacteria | [Clostridium] fimetarium | 1 |
| Bacteria | Salinigranum rubrum | 2 |
| Bacteria | Staphylococcus equorum | 4 |
| Bacteria | Haliea sp. | 1 |
| Bacteria | Mannheimia granulomatis | 2 |
| Bacteria | Variovorax sp. OV700 | 1 |
| Bacteria | Oceanibaculum pacificum | 1 |
| Bacteria | Yersinia frederiksenii Y225 | 2 |
| Bacteria | Streptococcus sp. HMSC069D09 | 3 |
| Bacteria | Lachnoclostridium sp. An138 | 1 |
| Bacteria | Fusobacterium necrophorum DJ-2 | 4 |
| Bacteria | Anoxybacillus sp. 103 | 1 |
| Bacteria | Candidatus Aminicenantes bacterium ADurb.Bin508 | 1 |
| Bacteria | Vibrio nereis | 3 |
| Bacteria | Acidipropionibacterium jensenii | 3 |
| Bacteria | Leucothrix pacifica | 1 |
| Bacteria | Brachymonas denitrificans DSM 15123 | 1 |
| Invertebrates | Anopheles stephensi | 2 |
| Bacteria | Aeromonas salmonicida subsp. salmonicida A449 | 2 |
| Bacteria | Halomonas huangheensis | 2 |
| Bacteria | Enterococcus faecalis ERV85 | 2 |
| Bacteria | Rhodosalinus sediminis | 1 |
| Bacteria | Rhodopirellula sp. SWK7 | 1 |
| Bacteria | Pseudomonas putida KT2440 | 2 |
| Bacteria | Candidatus Schmidhempelia bombi str. Bimp | 2 |
| Bacteria | Blautia sp. An249 | 3 |
| Bacteria | Salinisphaera sp. Q1T1-3 | 2 |
| Bacteria | Microbacterium agarici | 4 |
| Bacteria | Geosporobacter subterraneus DSM 17957 | 8 |
| Bacteria | Aquabacterium olei | 1 |
| Bacteria | Yersinia intermedia | 3 |
| Invertebrates | Drosophila busckii | 2 |
| Bacteria | Atopobium vaginae DSM 15829 | 5 |
| Bacteria | Streptococcus infantis ATCC 700779 | 1 |
| Bacteria | Thiohalobacter thiocyanaticus | 1 |
| Bacteria | Clostridium sp. AM34-9AC | 1 |
| Bacteria | Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 | 6 |
| Bacteria | Pelagibaca abyssi | 1 |
| Bacteria | Agromyces ramosus | 4 |
| Vertebrates | Merops nubicus | 1 |
| Bacteria | Sphaerisporangium album | 1 |
| Bacteria | Planctomycetes bacterium RBG_16_55_9 | 3 |
| Bacteria | Paraclostridium benzoelyticum | 3 |
| Bacteria | Phaeospirillum molischianum DSM 120 | 2 |
| Bacteria | Geobacillus sp. Y4.1MC1 | 7 |
| Bacteria | Mycobacteroides abscessus subsp. bolletii | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Bovismorbificans | 7 |
| Bacteria | Microbacterium humi | 3 |
| Bacteria | Streptococcus pasteurianus | 5 |
| Bacteria | Sulfitobacter sp. HI0023 | 1 |
| Bacteria | Sinobacterium caligoides | 1 |
| Bacteria | Thermofilum sp. NZ13 | 1 |
| Bacteria | Rhodobacter sphaeroides ATCC 17029 | 1 |
| Bacteria | Rhodoplanes roseus | 1 |
| Bacteria | Paenibacillus riograndensis SBR5 | 5 |
| Bacteria | Stenotrophomonas rhizophila | 2 |
| Bacteria | Cupriavidus taiwanensis LMG 19424 | 1 |
| Bacteria | Enterococcus gallinarum | 11 |
| Bacteria | Candidatus Protochlamydia amoebophila | 2 |
| Bacteria | Aureimonas sp. Leaf427 | 2 |
| Bacteria | Paenibacillus sp. FSL R5-808 | 4 |
| Bacteria | Methylobacterium sp. Leaf456 | 2 |
| Bacteria | Agromyces sp. NDB4Y10 | 4 |
| Bacteria | Mariprofundus micogutta | 1 |
| Bacteria | Bartonella rattimassiliensis 15908 | 1 |
| Bacteria | Thermoactinomyces sp. AS95 | 5 |
| Bacteria | Fictibacillus arsenicus | 7 |
| Bacteria | Xanthomonas campestris pv. campestris str. 8004 | 1 |
| Bacteria | Vibrio tapetis subsp. tapetis | 6 |
| Bacteria | Oceanicaulis sp. HTCC2633 | 1 |
| Bacteria | Collinsella aerofaciens | 5 |
| Bacteria | Marmoricola sp. 4Q3S-7 | 2 |
| Bacteria | Paenibacillus etheri | 1 |
| Bacteria | Rhodobacter sphaeroides ATCC 17025 | 1 |
| Bacteria | Chromatiales bacterium (ex Bugula neritina AB1) | 1 |
| Bacteria | Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 | 1 |
| Bacteria | Escherichia coli UMN026 | 4 |
| Bacteria | Enterococcus faecalis TX0027 | 10 |
| Bacteria | candidate division WOR-1 bacterium DG_54_3 | 1 |
| Bacteria | Legionella brunensis | 1 |
| Invertebrates | Diploscapter pachys | 5 |
| Bacteria | Streptomyces scopuliridis RB72 | 2 |
| Bacteria | Photorhabdus khanii NC19 | 1 |
| Bacteria | Pseudomonas marginalis ICMP 11289 | 1 |
| Bacteria | Finegoldia magna | 1 |
| Bacteria | Enterococcus faecalis WKS-26-18-2 | 2 |
| Bacteria | Listeria grandensis FSL F6-0971 | 4 |
| Bacteria | Burkholderia cenocepacia | 2 |
| Bacteria | Enterobacterales bacterium CwR94 | 8 |
| Bacteria | Legionella maceachernii | 1 |
| Bacteria | Desulfacinum hydrothermale DSM 13146 | 2 |
| Bacteria | Vibrio sp. MedPE-SWchi | 3 |
| Bacteria | Faecalibacterium sp. An121 | 2 |
| Bacteria | Bacillus daliensis | 4 |
| Bacteria | Xenorhabdus nematophila AN6/1 | 2 |
| Bacteria | Nocardioides sp. Root1257 | 3 |
| Bacteria | Deltaproteobacteria bacterium GWA2_55_10 | 1 |
| Bacteria | Corynebacterium sp. JB4 | 3 |
| Bacteria | Blautia wexlerae | 1 |
| Bacteria | Azospirillum sp. TSH58 | 1 |
| Environmental samples | Clostridium sp. CAG:352 | 2 |
| Bacteria | Congregibacter litoralis KT71 | 1 |
| Bacteria | [Haemophilus] ducreyi | 2 |
| Bacteria | Halomonas taeanensis | 2 |
| Bacteria | Brachyspira hyodysenteriae WA1 | 7 |
| Bacteria | Salmonella enterica subsp. enterica serovar Uganda str. R8-3404 | 4 |
| Bacteria | Hyphomonadaceae bacterium | 3 |
| Bacteria | Staphylococcus sp. HMSC62A08 | 3 |
| Bacteria | Marinobacterium aestuarii | 1 |
| Bacteria | Ochrobactrum anthropi | 2 |
| Bacteria | Aerococcus viridans ATCC 11563 = CCUG 4311 | 3 |
| Bacteria | Candidatus Thorarchaeota archaeon SMTZ1-83 | 1 |
| Bacteria | Sutterella parvirubra YIT 11816 | 1 |
| Invertebrates | Cyphomyrmex costatus | 2 |
| Bacteria | Phycisphaerae bacterium SG8_4 | 3 |
| Bacteria | Ignatzschineria ureiclastica | 1 |
| Bacteria | Vibrio parahaemolyticus RIMD 2210633 | 9 |
| Bacteria | Lactobacillus gasseri 224-1 | 3 |
| Bacteria | Micavibrio sp. TMED2 | 1 |
| Bacteria | Streptomyces griseocarneus | 2 |
| Bacteria | Geodermatophilus saharensis | 1 |
| Bacteria | Erwinia amylovora CFBP1430 | 4 |
| Bacteria | Providencia rettgeri DSM 1131 | 3 |
| Bacteria | Candidatus Frackibacter sp. T328-2 | 1 |
| Bacteria | Alphaproteobacteria bacterium MarineAlpha3_Bin2 | 1 |
| Bacteria | Escherichia coli 2-177-06_S3_C2 | 6 |
| Bacteria | Mycoplasma fermentans | 3 |
| Bacteria | Haloplasma contractile SSD-17B | 3 |
| Bacteria | Nesterenkonia sp. PF2B19 | 3 |
| Bacteria | Rhizobiales bacterium 62-17 | 2 |
| Bacteria | Acidovorax anthurii | 2 |
| Bacteria | Erwinia sp. 198 | 7 |
| Bacteria | Verrucomicrobia bacterium 61-8 | 2 |
| Bacteria | Gemmatimonadetes bacterium 13_1_40CM_4_69_8 | 2 |
| Bacteria | Rhodobacterales bacterium 12-65-15 | 1 |
| Bacteria | Lactobacillus pobuzihii | 3 |
| Bacteria | Gulosibacter sp. 10 | 4 |
| Environmental samples | Parasutterella excrementihominis CAG:233 | 1 |
| Bacteria | Omnitrophica bacterium RIFOXYB12_FULL_50_7 | 2 |
| Bacteria | Planctomycetes bacterium GWC2_49_10 | 1 |
| Bacteria | Pseudomonas cuatrocienegasensis | 2 |
| Bacteria | Nitrospina sp. | 2 |
| Bacteria | Beggiatoa leptomitoformis | 1 |
| Bacteria | Verrucomicrobiaceae bacterium TMED86 | 1 |
| Invertebrates | Atta cephalotes | 3 |
| Bacteria | Erysipelotrichaceae bacterium OH741_COT-311 | 4 |
| Bacteria | Leptospira interrogans serovar Lai str. 56601 | 1 |
| Bacteria | Isosphaera pallida ATCC 43644 | 2 |
| Bacteria | Vibrio sp. HA2012 | 10 |
| Bacteria | Marinobacter sp. X15-166B | 1 |
| Bacteria | Escherichia coli O69:H11 str. 08-4661 | 3 |
| Bacteria | Colwellia sp. Phe_37 | 1 |
| Bacteria | Peptostreptococcus russellii | 7 |
| Bacteria | Caldithrix sp. RBG_13_44_9 | 2 |
| Bacteria | Alishewanella sp. HH-ZS | 1 |
| Bacteria | Arthrobacter pityocampae | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Rubislaw str. A4-653 | 5 |
| Bacteria | Lachnoclostridium sp. An196 | 3 |
| Bacteria | Agrobacterium sp. FDAARGOS_525 | 1 |
| Bacteria | Clostridium sp. L74 | 1 |
| Bacteria | Brachyspira hyodysenteriae ATCC 27164 | 6 |
| Bacteria | Labrenzia suaedae | 1 |
| Bacteria | Bacillus australimaris | 1 |
| Bacteria | Roseovarius sp. HN-E21 | 1 |
| Bacteria | Paenibacillus whitsoniae | 2 |
| Bacteria | Actinomadura madurae | 2 |
| Bacteria | Exiguobacterium sibiricum 255-15 | 2 |
| Bacteria | Halomonas endophytica | 1 |
| Bacteria | Acinetobacter boissieri | 2 |
| Bacteria | Candidatus Micropelagos thuwalensis | 1 |
| Bacteria | Lachnospiraceae bacterium M18-1 | 4 |
| Bacteria | Lachnospiraceae bacterium XBD2001 | 1 |
| Bacteria | Mycoplasma agassizii | 4 |
| Bacteria | Streptococcus macedonicus | 2 |
| Bacteria | Staphylococcus muscae | 3 |
| Vertebrates | Opisthocomus hoazin | 6 |
| Bacteria | candidate division Hyd24-12 bacterium ADurb.Bin004 | 4 |
| Bacteria | Siccibacter turicensis | 5 |
| Bacteria | Acidipropionibacterium acidipropionici ATCC 4875 | 6 |
| Bacteria | Sphingomonas sp. Leaf226 | 1 |
| Bacteria | Paucibacter sp. KCTC 42545 | 1 |
| Bacteria | Streptomyces wuyuanensis | 2 |
| Bacteria | Eubacterium limosum | 4 |
| Bacteria | Paenibacillus macquariensis | 2 |
| Bacteria | Methylobacterium sp. 17Sr1-28 | 1 |
| Bacteria | Subdoligranulum sp. | 1 |
| Bacteria | Phytobacter ursingii | 7 |
| Bacteria | Bacillus sp. MUM 13 | 3 |
| Bacteria | Vibrio sp. J2-31 | 2 |
| Bacteria | Lysinimonas sp. 2DFWR-13 | 3 |
| Bacteria | Paracoccus sp. SC2-6 | 2 |
| Bacteria | Candidatus Desantisbacteria bacterium CG_4_10_14_0_8_um_filter_48_22 | 1 |
| Bacteria | Bartonella alsatica IBS 382 | 1 |
| Bacteria | bacterium A52C2 | 1 |
| Bacteria | Erythrobacter sp. YT30 | 1 |
| Bacteria | Spiroplasma floricola 23-6 | 2 |
| Bacteria | Rhizobium sp. Root483D2 | 1 |
| Bacteria | Francisella tularensis | 1 |
| Bacteria | Brucella canis ATCC 23365 | 1 |
| Bacteria | Sinorhizobium sp. RAC02 | 2 |
| Bacteria | Staphylococcus sp. HMSC036D05 | 1 |
| Bacteria | Lactobacillus amylovorus DSM 16698 | 1 |
| Bacteria | Epulopiscium sp. SCG-D08WGA-EpuloA1 | 2 |
| Bacteria | Corynebacterium mycetoides | 1 |
| Bacteria | Simiduia agarivorans SA1 = DSM 21679 | 1 |
| Bacteria | Caenispirillum bisanense | 2 |
| Bacteria | Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8 | 1 |
| Bacteria | Actinobacillus succinogenes 130Z | 6 |
| Bacteria | Enterococcus sp. 10F3_DIV0382 | 1 |
| Bacteria | Rubrimonas cliftonensis | 1 |
| Bacteria | Corynebacterium nuruki | 1 |
| Bacteria | Xenorhabdus mauleonii | 4 |
| Bacteria | Pseudomonas stutzeri A1501 | 2 |
| Bacteria | Hydrogenophaga sp. Root209 | 1 |
| Bacteria | Rhizobium sp. Root1220 | 1 |
| Bacteria | Xenorhabdus hominickii | 1 |
| Bacteria | Sphingomonas sp. Leaf257 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11 | 1 |
| Bacteria | Oleibacter sp. HI0075 | 1 |
| Bacteria | Verrucomicrobia bacterium GWF2_51_19 | 1 |
| Bacteria | Paenibacillus wynnii | 5 |
| Environmental samples | Brachyspira sp. CAG:700 | 5 |
| Bacteria | Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_57_9 | 3 |
| Bacteria | Gallionellales bacterium CG08_land_8_20_14_0_20_59_87 | 1 |
| Bacteria | Bacillus pseudalcaliphilus | 3 |
| Bacteria | Blautia hydrogenotrophica DSM 10507 | 2 |
| Bacteria | Paracoccus sp. J56 | 1 |
| Bacteria | Bacillus sp. HNG | 1 |
| Bacteria | Thiocapsa sp. KS1 | 2 |
| Bacteria | Staphylococcus aureus subsp. aureus MSSA476 | 1 |
| Bacteria | Treponema denticola H1-T | 1 |
| Bacteria | Micromonospora sp. Llam0 | 1 |
| Bacteria | Microvirga guangxiensis | 3 |
| Environmental samples | Firmicutes bacterium CAG:41 | 1 |
| Bacteria | Streptomyces sp. Ag109_G2-1 | 2 |
| Bacteria | Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 | 2 |
| Bacteria | Brevundimonas sp. 32-68-21 | 1 |
| Bacteria | Chromobacterium sp. MWU14-2602 | 1 |
| Bacteria | Mesoplasma syrphidae | 2 |
| Bacteria | Bacillus krulwichiae | 2 |
| Bacteria | Chlamydiales bacterium SCGC AG-110-P3 | 1 |
| Bacteria | Leuconostoc citreum LBAE C10 | 2 |
| Bacteria | Corynebacterium crudilactis | 1 |
| Bacteria | Haematobacter massiliensis | 1 |
| Bacteria | Bordetella pertussis Tohama I | 1 |
| Bacteria | Microbacterium sp. oral taxon 186 str. F0373 | 2 |
| Bacteria | Propionibacterium sp. HGH0353 | 1 |
| Bacteria | Pseudomonas caspiana | 2 |
| Bacteria | Herpetosiphon aurantiacus DSM 785 | 2 |
| Bacteria | Sphingopyxis indica | 1 |
| Bacteria | Tranquillimonas alkanivorans | 1 |
| Bacteria | Sphaerochaeta coccoides DSM 17374 | 2 |
| Bacteria | Arthrobacter sp. AK-YN10 | 2 |
| Bacteria | Brevirhabdus pacifica | 1 |
| Bacteria | Vibrio campbellii ATCC BAA-1116 | 2 |
| Bacteria | Serratia proteamaculans | 2 |
| Bacteria | Leifsonia xyli | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Cerro | 3 |
| Bacteria | Desulfofaba hansenii | 3 |
| Bacteria | Pseudorhodoferax sp. Leaf265 | 1 |
| Bacteria | Neisseria sp. HMSC056A03 | 1 |
| Bacteria | Enterococcus faecalis TX0645 | 4 |
| Bacteria | Clostridium butyricum E4 str. BoNT E BL5262 | 3 |
| Bacteria | Burkholderia sp. BDU6 | 1 |
| Bacteria | Bacillus sp. LF1 | 2 |
| Bacteria | Amycolatopsis marina | 1 |
| Bacteria | Sphingopyxis sp. | 1 |
| Bacteria | Pseudoalteromonas ulvae | 1 |
| Bacteria | Vibrio furnissii | 1 |
| Bacteria | Rhodospirillales bacterium SCN 65-16 | 1 |
| Bacteria | Alcanivorax dieselolei B5 | 1 |
| Bacteria | Devosia sp. Leaf64 | 1 |
| Environmental samples | Proteobacteria bacterium CAG:495 | 1 |
| Bacteria | Thermoplasmatales archaeon SG8-52-2 | 1 |
| Bacteria | Pseudomonas putida F1 | 1 |
| Bacteria | Clostridium botulinum B str. Eklund 17B (NRP) | 4 |
| Bacteria | Brevundimonas sp. | 2 |
| Bacteria | Microbacterium oleivorans | 3 |
| Bacteria | Devosia limi DSM 17137 | 2 |
| Bacteria | Deltaproteobacteria bacterium GWB2_55_19 | 1 |
| Bacteria | Enterobacter sp. KINAN-G | 1 |
| Bacteria | Agrobacterium rhizogenes | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 | 3 |
| Bacteria | Hyphomonas chukchiensis | 1 |
| Invertebrates | Hypsibius dujardini | 3 |
| Bacteria | Gordonia rubripertincta | 1 |
| Bacteria | Chlamydia caviae GPIC | 1 |
| Bacteria | Ferrovum sp. PN-J185 | 1 |
| Bacteria | Parcubacteria group bacterium GW2011_GWA2_47_8 | 1 |
| Bacteria | Hahellaceae bacterium | 2 |
| Bacteria | Pontibaca methylaminivorans | 1 |
| Bacteria | Rhizobium gallicum | 2 |
| Bacteria | Hoeflea olei | 1 |
| Bacteria | Halomonas gudaonensis | 2 |
| Bacteria | Rhizobium sp. L43 | 1 |
| Bacteria | Halomonas sp. A11-A | 2 |
| Bacteria | Bacillus sp. cl25 | 1 |
| Bacteria | Corallococcus sp. H22C18031201 | 2 |
| Bacteria | Escherichia coli KTE37 | 4 |
| Bacteria | Eubacterium sp. AF15-50 | 1 |
| Bacteria | Comamonas terrigena | 1 |
| Bacteria | Carboxydothermus pertinax | 1 |
| Bacteria | Streptomyces sp. TSRI0107 | 1 |
| Bacteria | Verrucomicrobia bacterium CAG:312_58_20 | 2 |
| Bacteria | Sphingobium sp. AP49 | 1 |
| Bacteria | Rathayibacter sp. PhB127 | 2 |
| Bacteria | bacterium HR18 | 2 |
| Bacteria | Bacillus sp. SAJ1 | 1 |
| Bacteria | Streptomyces sp. NRRL F-6602 | 1 |
| Bacteria | Rhizobium sp. AC44/96 | 2 |
| Bacteria | bacterium ADurb.BinA028 | 2 |
| Bacteria | Anaerococcus sp. HMSC075B03 | 1 |
| Bacteria | Streptomyces sp. TLI_235 | 1 |
| Bacteria | Parasphingopyxis lamellibrachiae | 1 |
| Bacteria | Mycobacterium sp. EPa45 | 2 |
| Bacteria | Desulfonatronum sp. SC1 | 1 |
| Bacteria | Moraxella lacunata | 1 |
| Bacteria | Rhizobium anhuiense | 2 |
| Bacteria | Enterobacter sp. R4-368 | 3 |
| Bacteria | Marinobacter sp. R17 | 2 |
| Bacteria | Rhodobacter sphaeroides | 1 |
| Bacteria | Pseudomonas aeruginosa BL04 | 1 |
| Bacteria | Zhongshania sp. ZX-21 | 1 |
| Bacteria | Clostridium formicaceticum | 1 |
| Bacteria | Geobacter sp. DSM 2909 | 1 |
| Bacteria | Ruminococcus lactaris ATCC 29176 | 2 |
| Bacteria | Herbaspirillum sp. YR522 | 1 |
| Environmental samples | Clostridium sp. CAG:356 | 2 |
| Bacteria | Vibrio sp. RC586 | 2 |
| Bacteria | Staphylococcus sp. HMSC067F07 | 2 |
| Bacteria | Streptomyces silvensis | 1 |
| Bacteria | Listeria monocytogenes serotype 1/2b str. 10-0811 | 1 |
| Bacteria | Insolitispirillum peregrinum | 2 |
| Bacteria | Leptolinea tardivitalis | 2 |
| Bacteria | Burkholderia sp. Ch1-1 | 1 |
| Bacteria | Vibrio ordalii 12B09 | 2 |
| Bacteria | Mangrovibacter plantisponsor | 2 |
| Bacteria | Rhodothermus profundi | 1 |
| Bacteria | Candidatus Desantisbacteria bacterium CG_4_10_14_3_um_filter_40_18 | 1 |
| Bacteria | Nitratireductor indicus C115 | 3 |
| Bacteria | delta proteobacterium MLS_D | 1 |
| Bacteria | Lactobacillus helveticus CIRM-BIA 101 | 1 |
| Vertebrates | Iconisemion striatum | 5 |
| Bacteria | Bordetella genomosp. 5 | 1 |
| Bacteria | Cellvibrio sp. 79 | 1 |
| Bacteria | Elusimicrobia bacterium CG02_land_8_20_14_3_00_37_13 | 1 |
| Environmental samples | Eubacterium sp. CAG:603 | 1 |
| Bacteria | Pseudomonas aeruginosa UCBPP-PA14 | 1 |
| Invertebrates | Danaus plexippus plexippus | 2 |
| Bacteria | Pseudomonas kuykendallii | 2 |
| Bacteria | Ruminococcaceae bacterium D16 | 1 |
| Bacteria | Parachlamydia acanthamoebae | 1 |
| Bacteria | Kocuria sp. WRN011 | 1 |
| Bacteria | Roseicyclus mahoneyensis | 1 |
| Bacteria | Bacillus sp. AFS076308 | 5 |
| Bacteria | Pseudomonas alcaligenes NBRC 14159 | 1 |
| Bacteria | Colwellia sp. PAMC 21821 | 1 |
| Bacteria | Burkholderia pseudomallei 1710a | 1 |
| Bacteria | Thermoanaerobacter brockii subsp. finnii Ako-1 | 6 |
| Bacteria | Alishewanella aestuarii B11 | 1 |
| Bacteria | Ignavibacteria bacterium ADurb.Bin266 | 1 |
| Bacteria | Microbacterium chocolatum | 3 |
| Bacteria | Buttiauxella gaviniae ATCC 51604 | 1 |
| Bacteria | Chloroflexi bacterium RBG_16_70_13 | 1 |
| Bacteria | Leptospira weilii str. Ecochallenge | 1 |
| Invertebrates | Anoplophora glabripennis | 3 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.11.2.1 | 1 |
| Bacteria | Thauera propionica | 1 |
| Bacteria | Marinobacter zhejiangensis | 1 |
| Bacteria | Alphaproteobacteria bacterium MarineAlpha9_Bin3 | 1 |
| Bacteria | Vulgatibacter incomptus | 1 |
| Bacteria | Streptococcus lutetiensis | 1 |
| Bacteria | Candidatus Glassbacteria bacterium GWA2_58_10 | 2 |
| Bacteria | Hydrocarboniphaga effusa AP103 | 2 |
| Bacteria | Planctomyces sp. SH-PL62 | 1 |
| Bacteria | Sphingobium sp. 32-64-5 | 1 |
| Bacteria | Rhodococcus sp. B7740 | 1 |
| Environmental samples | Ruminococcus sp. CAG:55 | 1 |
| Environmental samples | Clostridium clostridioforme CAG:511 | 2 |
| Bacteria | Porphyrobacter sp. LM 6 | 1 |
| Bacteria | Wohlfahrtiimonas chitiniclastica SH04 | 1 |
| Bacteria | Listeria ivanovii subsp. ivanovii PAM 55 | 8 |
| Invertebrates | Anopheles minimus | 2 |
| Bacteria | Mesorhizobium amorphae CCBAU 01583 | 1 |
| Bacteria | Paraburkholderia eburnea | 1 |
| Bacteria | Spirochaetes bacterium GWB1_66_5 | 1 |
| Bacteria | candidate division TA06 bacterium DG_24 | 3 |
| Bacteria | Streptomyces scabiei 87.22 | 1 |
| Bacteria | Bacillus sp. MUM 116 | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.04.1.1 | 1 |
| Bacteria | Cupriavidus taiwanensis | 1 |
| Bacteria | Azotobacter vinelandii DJ | 2 |
| Bacteria | Nocardioides sp. JS614 | 2 |
| Bacteria | Propionibacterium sp. KPL1844 | 2 |
| Bacteria | Bosea sp. LC85 | 1 |
| Bacteria | Bosea sp. Root483D1 | 1 |
| Bacteria | Arthrobacter rhombi | 2 |
| Bacteria | Desulfovibrio ferrophilus | 1 |
| Bacteria | Mesorhizobium muleiense | 1 |
| Bacteria | Roseibaca calidilacus | 1 |
| Bacteria | Asticcacaulis sp. AC466 | 1 |
| Bacteria | Actinomyces sp. Chiba101 | 1 |
| Bacteria | Sutterella wadsworthensis 2_1_59BFAA | 1 |
| Bacteria | Paracoccus sp. MKU1 | 1 |
| Bacteria | Thermoanaerobacter uzonensis DSM 18761 | 2 |
| Bacteria | Actinopolyspora mzabensis | 1 |
| Bacteria | Gemmobacter caeni | 1 |
| Bacteria | Rhodospirillaceae bacterium TMED23 | 1 |
| Bacteria | Entomoplasmatales bacterium EntAcro10 | 1 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 | 1 |
| Bacteria | Butyrivibrio sp. M55 | 1 |
| Bacteria | Amycolatopsis saalfeldensis | 1 |
| Bacteria | Actinobacillus seminis | 3 |
| Bacteria | Paenibacillus vortex V453 | 1 |
| Bacteria | Streptomyces sp. 2333.5 | 1 |
| Bacteria | Polynucleobacter sp. MWH-Adler-W8 | 1 |
| Bacteria | Lacimicrobium alkaliphilum | 1 |
| Bacteria | Ectothiorhodospira sp. BSL-9 | 1 |
| Bacteria | Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 | 1 |
| Bacteria | Arthrobacter sp. AQ5-06 | 3 |
| Bacteria | Lactobacillus sp. UMNPBX9 | 1 |
| Bacteria | Tabrizicola sp. TH137 | 1 |
| Bacteria | Actinosynnema mirum DSM 43827 | 1 |
| Bacteria | Curvibacter sp. AEP1-3 | 1 |
| Bacteria | Arthrobacter sp. Soil763 | 2 |
| Bacteria | Desulfonatronum thiosulfatophilum | 1 |
| Bacteria | Enterobacteriaceae bacterium | 2 |
| Bacteria | Ottowia oryzae | 1 |
| Bacteria | Neisseria sp. HMSC06F02 | 1 |
| Bacteria | Phycisphaeraceae bacterium TMED231 | 1 |
| Bacteria | Methylosinus sp. 3S-1 | 1 |
| Bacteria | Pseudoruegeria haliotis | 1 |
| Bacteria | Brachybacterium paraconglomeratum | 4 |
| Bacteria | Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 | 1 |
| Bacteria | Agreia sp. Leaf283 | 1 |
| Bacteria | Methylopila sp. Yamaguchi | 1 |
| Bacteria | Ferrovum sp. Z-31 | 1 |
| Bacteria | Lysinibacillus contaminans | 2 |
| Bacteria | bacteria symbiont BFo2 of Frankliniella occidentalis | 2 |
| Bacteria | Thioalkalivibrio sulfidiphilus HL-EbGr7 | 2 |
| Bacteria | Rhodovulum sulfidophilum | 1 |
| Bacteria | Desulfosporosinus acididurans | 2 |
| Bacteria | Lactobacillus delbrueckii subsp. lactis CRL581 | 3 |
| Bacteria | Paenibacillus crassostreae | 2 |
| Bacteria | Curtobacterium sp. MCBA15_012 | 1 |
| Bacteria | Enterococcus mundtii CRL35 | 3 |
| Bacteria | Humibacillus sp. DSM 29435 | 1 |
| Bacteria | Sphingorhabdus marina DSM 22363 | 1 |
| Bacteria | Paraburkholderia caffeinilytica | 1 |
| Bacteria | Clostridium sp. AF32-7AC | 1 |
| Bacteria | Paenibacillus sp. VMFN-D1 | 1 |
| Bacteria | Finegoldia magna ALB8 | 1 |
| Bacteria | Paraburkholderia fungorum | 2 |
| Bacteria | Chromatocurvus sp. F02 | 1 |
| Bacteria | Bartonella birtlesii LL-WM9 | 1 |
| Bacteria | Burkholderia sp. SRS-W-2-2016 | 1 |
| Bacteria | Marivivens niveibacter | 1 |
| Bacteria | Corynebacterium diphtheriae | 1 |
| Bacteria | Geodermatophilus amargosae | 1 |
| Bacteria | Nitrosomonas sp. Is79A3 | 1 |
| Bacteria | Deltaproteobacteria bacterium DG_8 | 1 |
| Bacteria | Burkholderiales bacterium 66-26 | 1 |
| Bacteria | Microbacterium sp. MRS-1 | 1 |
| Bacteria | Bacillus sp. FJAT-27225 | 4 |
| Bacteria | Rhodopirellula sp. MGV | 2 |
| Bacteria | Hydrogenophilales bacterium 16-61-112 | 1 |
| Bacteria | Xenorhabdus bovienii str. Intermedium | 1 |
| Bacteria | Marinobacter sp. 34-60-7 | 1 |
| Environmental samples | uncultured delta proteobacterium | 1 |
| Bacteria | Paenibacillus sp. IHBB 10380 | 2 |
| Bacteria | Ruegeria sp. R11 | 1 |
| Bacteria | Mycobacterium sp. 852013-50091_SCH5140682 | 1 |
| Bacteria | Microbacterium sp. HSID17254 | 2 |
| Bacteria | Buchnera aphidicola (Schlechtendalia chinensis) | 1 |
| Bacteria | Gardnerella vaginalis 6119V5 | 1 |
| Bacteria | Acinetobacter pittii | 1 |
| Bacteria | Akkermansia glycaniphila | 1 |
| Bacteria | Lactobacillus versmoldensis DSM 14857 = KCTC 3814 | 1 |
| Invertebrates | Pectinophora gossypiella | 1 |
| Bacteria | Brevibacillus sp. SKDU10 | 1 |
| Bacteria | Rhizobium altiplani | 1 |
| Bacteria | Candidatus Izimaplasma sp. HR1 | 2 |
| Bacteria | Pantoea sp. BL1 | 2 |
| Bacteria | Oceanospirillum multiglobuliferum | 1 |
| Invertebrates | Heligmosomoides polygyrus bakeri | 2 |
| Bacteria | Rhodococcus pyridinivorans SB3094 | 1 |
| Bacteria | Spirochaetes bacterium DG_61 | 5 |
| Bacteria | Desulfosporosinus sp. OL | 1 |
| Bacteria | Alphaproteobacteria bacterium TMED199 | 1 |
| Bacteria | Lactococcus chungangensis CAU 28 = DSM 22330 | 1 |
| Bacteria | Halocynthiibacter arcticus | 1 |
| Bacteria | Streptomyces turgidiscabies Car8 | 1 |
| Bacteria | Sinorhizobium sp. BJ1 | 3 |
| Bacteria | Paraburkholderia susongensis | 1 |
| Bacteria | Lactobacillus sucicola | 1 |
| Bacteria | Erythrobacter sp. HL-111 | 1 |
| Bacteria | Caulobacter henricii | 1 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_16_66_30 | 1 |
| Bacteria | Rickettsiales bacterium TMED131 | 1 |
| Bacteria | Amycolatopsis mediterranei U32 | 1 |
| Bacteria | Candidatus Doolittlea endobia | 1 |
| Bacteria | Legionella feeleii | 1 |
| Bacteria | Corynebacterium sp. KPL1986 | 1 |
| Bacteria | Marinomonas polaris DSM 16579 | 1 |
| Bacteria | Colwellia sp. 39_35_sub15_T18 | 1 |
| Bacteria | Prauserella muralis | 2 |
| Bacteria | Facklamia ignava | 1 |
| Bacteria | Pseudomonas sabulinigri | 1 |
| Bacteria | Caulobacter sp. AP07 | 1 |
| Bacteria | Eikenella corrodens ATCC 23834 | 1 |
| Bacteria | Paenibacillus sp. UNC496MF | 2 |
| Bacteria | Elusimicrobia bacterium CG1_02_37_114 | 2 |
| Bacteria | Corynebacterium sp. HMSC078C09 | 1 |
| Bacteria | Bifidobacterium breve JCM 7019 | 1 |
| Bacteria | Geobacillus sp. LEMMY01 | 1 |
| Bacteria | Mycoplasma capricolum | 1 |
| Bacteria | Candidatus Izimaplasma sp. ZiA1 | 2 |
| Bacteria | Sphingobium sp. SCG-1 | 1 |
| Bacteria | Cephaloticoccus capnophilus | 2 |
| Bacteria | Rhodococcus sp. S2-17 | 1 |
| Bacteria | [Clostridium] symbiosum | 3 |
| Invertebrates | Glossina palpalis gambiensis | 1 |
| Bacteria | Streptococcus milleri | 2 |
| Bacteria | Nocardioides sp. Root682 | 1 |
| Bacteria | Halioglobus lutimaris | 1 |
| Bacteria | Agrococcus baldri | 3 |
| Bacteria | Brucella suis 1330 | 1 |
| Bacteria | Nioella sp. | 1 |
| Bacteria | Chromatiales bacterium USCg_Taylor | 1 |
| Bacteria | Rhodoluna lacicola | 2 |
| Bacteria | Sulfitobacter sp. SK011 | 1 |
| Bacteria | Microbacterium sp. AG238 | 1 |
| Bacteria | Coprococcus catus | 2 |
| Bacteria | Escherichia fergusonii | 1 |
| Rodents | Meriones unguiculatus | 1 |
| Bacteria | Cupriavidus sp. GA3-3 | 1 |
| Bacteria | Nannocystis exedens | 1 |
| Bacteria | Corynebacterium sp. 2184 | 1 |
| Bacteria | Streptococcus macedonicus ACA-DC 198 | 1 |
| Bacteria | Arthrobacter sp. Soil736 | 1 |
| Bacteria | Burkholderia pseudomallei | 1 |
| Bacteria | Pseudorhodoferax sp. Leaf274 | 2 |
| Bacteria | Paracoccus sp. CBA4604 | 1 |
| Bacteria | Methylobacterium sp. Leaf90 | 1 |
| Bacteria | Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27 | 2 |
| Bacteria | Erythrobacter litoralis | 1 |
| Bacteria | Thalassobius activus | 1 |
| Bacteria | Rhodobacteraceae bacterium MED-G07 | 1 |
| Bacteria | Blastopirellula marina DSM 3645 | 2 |
| Bacteria | Lactobacillus capillatus DSM 19910 | 4 |
| Bacteria | Burkholderia sp. GAS332 | 2 |
| Bacteria | Oceanicola sp. 22II-s10i | 1 |
| Bacteria | Candidatus Omnitrophica bacterium 4484_70.2 | 1 |
| Bacteria | Marinilabilia salmonicolor | 1 |
| Bacteria | Agreia sp. VKM Ac-2052 | 1 |
| Bacteria | Solimicrobium silvestre | 1 |
| Bacteria | Limnohabitans sp. JirII-29 | 1 |
| Bacteria | Candidatus Kinetoplastibacterium desouzaii TCC079E | 1 |
| Bacteria | Neisseria sp. HMSC068C04 | 1 |
| Bacteria | Pseudobutyrivibrio sp. ACV-2 | 1 |
| Bacteria | Oceanisphaera arctica | 1 |
| Bacteria | Halioglobus sp. U0301 | 1 |
| Bacteria | Streptomyces sp. PTY087I2 | 1 |
| Bacteria | Paenibacillus paeoniae | 2 |
| Bacteria | Candidatus Burkholderia humilis | 1 |
| Environmental samples | Azospirillum sp. CAG:239 | 1 |
| Bacteria | Longimonas halophila | 3 |
| Bacteria | Rhodobacteraceae bacterium MA-7-27 | 1 |
| Bacteria | Phaeobacter sp. 22II1-1F12B | 1 |
| Bacteria | Thiobacillus sp. 65-29 | 1 |
| Bacteria | Acholeplasma laidlawii PG-8A | 1 |
| Bacteria | Halostagnicola larsenii XH-48 | 1 |
| Bacteria | Streptomyces sp. Ncost-T10-10d | 1 |
| Bacteria | Streptococcus thermophilus M17PTZA496 | 1 |
| Bacteria | Gemmatimonadetes bacterium 13_1_40CM_3_70_8 | 1 |
| Bacteria | Deltaproteobacteria bacterium CG2_30_43_15 | 1 |
| Bacteria | Bacillus sp. B14905 | 1 |
| Bacteria | Gimesia sp. | 1 |
| Bacteria | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 | 1 |
| Bacteria | Deinococcus geothermalis DSM 11300 | 1 |
| Bacteria | Rhodothermaeota bacterium MED-G12 | 1 |
| Bacteria | Azospirillum thiophilum | 1 |
| Bacteria | Bibersteinia trehalosi Y31 | 1 |
| Bacteria | Leisingera sp. ANG1 | 1 |
| Bacteria | Actinomyces sp. oral taxon 448 str. F0400 | 1 |
| Bacteria | Bacillus cereus Rock3-44 | 1 |
| Bacteria | Nitrosomonas sp. Nm166 | 1 |
| Bacteria | Desulfohalobium retbaense DSM 5692 | 1 |
| Bacteria | Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 | 1 |
| Bacteria | Micrococcales bacterium | 1 |
| Vertebrates | Podiceps cristatus | 1 |
| Bacteria | Paenibacillus anaericanus | 1 |
| Bacteria | Streptomyces sp. CB01635 | 1 |
| Bacteria | Rhodobacter megalophilus | 1 |
| Bacteria | Verrucomicrobium sp. GAS474 | 1 |
| Bacteria | bacterium TMED198 | 1 |
| Bacteria | Photobacterium sp. CECT 9192 | 1 |
| Invertebrates | Amblyomma aureolatum | 1 |
| Bacteria | Pannonibacter indicus | 1 |
| Bacteria | Candidatus Aerophobetes bacterium ADurb.Bin490 | 1 |
| Bacteria | Streptomyces sp. WM4235 | 1 |
| Bacteria | Leptospira kobayashii | 1 |
| Bacteria | Devosia sp. LC5 | 1 |
| Bacteria | Gemmobacter sp. HYN0069 | 1 |
| Bacteria | Xenorhabdus beddingii | 1 |
| Bacteria | Microbacterium sp. Leaf151 | 1 |
| Bacteria | Desulfobulbus propionicus | 1 |
| Vertebrates | Haliaeetus albicilla | 1 |
| Bacteria | Comamonas testosteroni KF-1 | 1 |
| Bacteria | Microbulbifer sp. A4B17 | 1 |
| Bacteria | Providencia stuartii ATCC 25827 | 1 |
| Bacteria | Rathayibacter festucae DSM 15932 | 1 |
| Bacteria | Novosphingobium sp. AAP83 | 1 |
| Bacteria | Nonomuraea sp. ATCC 55076 | 1 |
| Bacteria | Francisella sp. W12-1067 | 1 |
| Bacteria | Tatumella sp. OPLPL6 | 1 |
| Bacteria | Bifidobacterium scardovii | 3 |
| Bacteria | Streptomyces rimosus subsp. pseudoverticillatus | 1 |
| Bacteria | Thiobacillus sp. SCN 64-317 | 1 |
| Bacteria | Actinoalloteichus sp. GBA129-24 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_60_28 | 1 |
| Bacteria | Rhizobium vallis | 2 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_13_62_12 | 1 |
| Bacteria | Prosthecochloris sp. GSB1 | 1 |
| Bacteria | Pseudomonas panipatensis | 1 |
| Bacteria | Pseudomonas sp. RIT 411 | 1 |
| Bacteria | Amycolatopsis balhimycina DSM 5908 | 1 |
| Bacteria | Paenibacillus glacialis | 1 |
| Bacteria | Parasutterella excrementihominis YIT 11859 | 1 |
| Bacteria | Methyloligella halotolerans | 1 |
| Bacteria | Olsenella sp. An290 | 3 |
| Bacteria | Rhizobium tumorigenes | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19 | 2 |
| Bacteria | Sorangiineae bacterium NIC37A_2 | 1 |
| Bacteria | Maricaulis maris MCS10 | 1 |
| Bacteria | Yokenella regensburgei ATCC 43003 | 3 |
| Bacteria | Candidatus Puniceispirillum sp. TMED245 | 1 |
| Bacteria | Cupriavidus metallidurans CH34 | 1 |
| Bacteria | Amycolatopsis pretoriensis | 1 |
| Bacteria | Leptothrix ochracea L12 | 1 |
| Bacteria | Yersinia rohdei | 1 |
| Bacteria | Bacillus campisalis | 1 |
| Bacteria | Shimia aestuarii | 1 |
| Bacteria | Escherichia coli MS 124-1 | 3 |
| Bacteria | Rhizobium phaseoli Ch24-10 | 1 |
| Bacteria | Novosphingobium aromaticivorans DSM 12444 | 1 |
| Bacteria | Streptococcus pyogenes MGAS10270 | 1 |
| Bacteria | Porphyrobacter dokdonensis DSW-74 | 1 |
| Bacteria | Pseudooceanicola lipolyticus | 1 |
| Vertebrates | Oreochromis mossambicus | 1 |
| Bacteria | Pseudomonas sp. FEMGT703P | 1 |
| Bacteria | Phyllobacterium sp. YR531 | 2 |
| Bacteria | Sphingomonas sp. Leaf42 | 1 |
| Environmental samples | Alistipes sp. CAG:29 | 1 |
| Environmental samples | gut metagenome | 1 |
| Bacteria | Pseudoalteromonas denitrificans DSM 6059 | 1 |
| Environmental samples | uncultured Stenotrophomonas sp. | 1 |
| Bacteria | Micrococcales bacterium 73-15 | 1 |
| Bacteria | Acidithiobacillus caldus ATCC 51756 | 1 |
| Bacteria | Stenotrophomonas maltophilia SKK35 | 1 |
| Bacteria | Rhizobium tubonense | 2 |
| Bacteria | Paenibacillus sp. FSL A5-0031 | 1 |
| Bacteria | Calidifontibacter indicus | 1 |
| Bacteria | Oceanicola litoreus | 1 |
| Bacteria | Vibrio sp. V1B | 1 |
| Bacteria | Staphylococcus sp. LCT-H4 | 1 |
| Bacteria | Bifidobacteriaceae bacterium WP021 | 1 |
| Bacteria | Methylobacterium sp. | 1 |
| Bacteria | Achromatium sp. WMS3 | 1 |
| Bacteria | Leptospira borgpetersenii serovar Javanica str. UI 09931 | 1 |
| Bacteria | Salinimonas sp. HMF8227 | 1 |
| Bacteria | Burkholderia multivorans CGD2 | 1 |
| Bacteria | Pseudomonas sp. s199 | 1 |
| Bacteria | Roseicitreum antarcticum | 1 |
| Bacteria | Sphingomonas sp. Root720 | 1 |
| Bacteria | Arenimonas donghaensis DSM 18148 = HO3-R19 | 1 |
| Bacteria | Planctomycetales bacterium 12-60-4 | 1 |
| Bacteria | Mycolicibacterium confluentis | 1 |
| Environmental samples | Ruminococcus sp. CAG:579 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_01_FULL_52_10 | 2 |
| Bacteria | Desulfobacter sp. | 1 |
| Bacteria | Altererythrobacter dongtanensis | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.10.1.1 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Molade | 2 |
| Bacteria | Rhizobacter sp. OV335 | 1 |
| Bacteria | Paraburkholderia xenovorans LB400 | 1 |
| Bacteria | Pseudovibrio sp. FO-BEG1 | 1 |
| Bacteria | Desulfovibrio ferrireducens | 1 |
| Bacteria | Kangiella sediminilitoris | 1 |
| Bacteria | Rhodovulum sp. PH10 | 1 |
| Bacteria | Monaibacterium marinum | 1 |
| Bacteria | Sideroxydans sp. RIFOXYD2_FULL_59_7 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.09.2.1 | 1 |
| Bacteria | Lysinibacillus sphaericus C3-41 | 1 |
| Bacteria | Candidatus Gallionella acididurans | 1 |
| Bacteria | Nocardia sp. Y48 | 1 |
| Bacteria | Sinorhizobium americanum | 1 |
| Bacteria | Rhodopirellula europaea 6C | 1 |
| Bacteria | Hyphomonadaceae bacterium TMED5 | 1 |
| Bacteria | Pseudomonas xinjiangensis | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.13.1.1 | 1 |
| Bacteria | Streptomyces viridifaciens | 1 |
| Bacteria | Arthrobacter sp. Soil764 | 1 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_63_19 | 1 |
| Bacteria | Rhizobium hidalgonense | 1 |
| Bacteria | Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 | 1 |
| Bacteria | Xanthomonas phaseoli pv. manihotis | 1 |
| Invertebrates | Schistosoma haematobium | 1 |
| Bacteria | Magnetospirillum gryphiswaldense MSR-1 v2 | 1 |
| Bacteria | Nitrospirae bacterium CG08_land_8_20_14_0_20_52_24 | 1 |
| Bacteria | Neisseria mucosa C102 | 1 |
| Bacteria | Synergistales bacterium 54_24 | 2 |
| Bacteria | Haloarcula sp. Atlit-7R | 1 |
| Bacteria | Acidovorax caeni | 1 |
| Bacteria | [Eubacterium] eligens ATCC 27750 | 1 |
| Bacteria | Acidovorax soli | 1 |
| Bacteria | Salinisphaera shabanensis E1L3A | 1 |
| Bacteria | Thermofilum carboxyditrophus 1505 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_63_16 | 1 |
| Bacteria | Bartonella washoeensis 085-0475 | 1 |
| Bacteria | Flexistipes sinusarabici | 1 |
| Bacteria | Gallionellales bacterium CG03_land_8_20_14_0_80_55_15 | 1 |
| Environmental samples | plant metagenome | 1 |
| Bacteria | Elusimicrobia bacterium ADurb.Bin231 | 1 |
| Bacteria | Bacillus persicus | 1 |
| Bacteria | Streptomyces venezuelae ATCC 10712 | 1 |
| Bacteria | Tsukamurella tyrosinosolvens | 1 |
| Bacteria | Noviherbaspirillum humi | 1 |
| Bacteria | Bacillus firmus | 1 |
| Bacteria | Butyrivibrio sp. YAB3001 | 1 |
| Bacteria | Polaromonas sp. JS666 | 2 |
| Bacteria | Pseudomonas donghuensis | 1 |
| Bacteria | Streptomyces sp. WAC00469 | 1 |
| Bacteria | Elusimicrobia bacterium CG_4_10_14_0_8_um_filter_37_32 | 1 |
| Bacteria | Pseudomonas putida S12 | 1 |
| Bacteria | Methylobacterium sp. Leaf399 | 1 |
| Bacteria | Rhodovulum robiginosum | 1 |
| Bacteria | Neisseria elongata subsp. glycolytica ATCC 29315 | 1 |
| Bacteria | Candidatus Dactylopiibacterium carminicum | 1 |
| Bacteria | Roseovarius azorensis | 1 |
| Vertebrates | Ficedula albicollis | 10 |
| Bacteria | Bibersteinia trehalosi USDA-ARS-USMARC-192 | 4 |
| Bacteria | Afipia sp. P52-10 | 2 |
| Bacteria | Pseudooceanicola sp. CY03 | 1 |
| Bacteria | Pseudomonas sp. ICMP 561 | 2 |
| Bacteria | Eubacterium sp. AF36-5BH | 2 |
| Bacteria | Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7 | 1 |
| Bacteria | Lactobacillus kisonensis F0435 | 7 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 | 1 |
| Bacteria | Chondromyces apiculatus DSM 436 | 3 |
| Bacteria | Sphingomonas sp. JJ-A5 | 1 |
| Bacteria | Streptosporangium subroseum | 1 |
| Invertebrates | Apis mellifera | 3 |
| Rodents | Dipodomys ordii | 20 |
| Bacteria | Selenomonas ruminantium | 17 |
| Bacteria | Paenibacillus sp. Root444D2 | 3 |
| Bacteria | Rhodobacterales bacterium 65-51 | 1 |
| Bacteria | Syntrophaceae bacterium PtaB.Bin038 | 1 |
| Bacteria | Opitutus terrae PB90-1 | 6 |
| Primates | Rhinopithecus roxellana | 38 |
| Bacteria | Erysipelatoclostridium sp. An15 | 1 |
| Bacteria | Rhodovulum imhoffii | 1 |
| Primates | Mandrillus leucophaeus | 30 |
| Bacteria | Mycoplasma conjunctivae | 4 |
| Bacteria | Bacillus wakoensis JCM 9140 | 4 |
| Vertebrates | Patagioenas fasciata monilis | 21 |
| Environmental samples | Clostridium clostridioforme CAG:132 | 11 |
| Bacteria | Spirochaetes bacterium ADurb.Bin215 | 6 |
| Bacteria | Aeromonas jandaei | 1 |
| Invertebrates | Brugia malayi | 5 |
| Primates | Cercocebus atys | 43 |
| Bacteria | Photobacterium toruni | 1 |
| Bacteria | Lachnospiraceae bacterium A2 | 7 |
| Bacteria | Subtercola sp. Z020 | 3 |
| Bacteria | Candidatus Kuenenia stuttgartiensis | 4 |
| Bacteria | Holdemania filiformis DSM 12042 | 19 |
| Bacteria | Lachnospiraceae bacterium 5_1_63FAA | 14 |
| Bacteria | Leptotrichia buccalis C-1013-b | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Enteritidis str. CFSAN000052 | 2 |
| Bacteria | Klebsiella oxytoca | 37 |
| Bacteria | Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 | 8 |
| Bacteria | Methylobacterium sp. UNCCL125 | 1 |
| Bacteria | Gilliamella apis | 13 |
| Bacteria | Staphylococcus sp. HMSC055H04 | 7 |
| Bacteria | [Clostridium] indolis | 5 |
| Invertebrates | Chilo suppressalis | 2 |
| Bacteria | Lentibacillus halodurans | 11 |
| Bacteria | Pseudomonas sp. phDV1 | 1 |
| Bacteria | Vibrio tasmaniensis LGP32 | 8 |
| Bacteria | Streptomyces sp. NRRL B-3648 | 2 |
| Bacteria | Bacillus nealsonii | 13 |
| Bacteria | Vibrio ishigakensis | 16 |
| Bacteria | Lactobacillus composti DSM 18527 = JCM 14202 | 7 |
| Bacteria | Salibacterium qingdaonense | 11 |
| Bacteria | Lactobacillus helveticus CIRM-BIA 104 | 1 |
| Bacteria | Escherichia coli O157 | 11 |
| Bacteria | Enterococcus faecium EnGen0153 | 5 |
| Bacteria | Fusobacterium ulcerans | 3 |
| Bacteria | Ralstonia solanacearum CFBP2957 | 1 |
| Bacteria | Aeromonas hydrophila subsp. hydrophila | 2 |
| Bacteria | Phyllobacterium leguminum | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Agama | 4 |
| Bacteria | [Propionibacterium] namnetense SK182B-JCVI | 7 |
| Bacteria | Streptococcus pneumoniae | 70 |
| Bacteria | Klebsiella michiganensis | 19 |
| Bacteria | Streptomyces parvulus | 1 |
| Vertebrates | Amphiprion percula | 38 |
| Bacteria | Streptomyces puniciscabiei | 2 |
| Bacteria | Halomonas elongata DSM 2581 | 2 |
| Bacteria | Acholeplasma oculi | 1 |
| Bacteria | Lactobacillus acidipiscis | 15 |
| Bacteria | Pseudomonas pohangensis | 1 |
| Bacteria | Desmospora sp. 8437 | 3 |
| Bacteria | Pisciglobus halotolerans | 8 |
| Bacteria | Novosphingobium sp. AAP1 | 2 |
| Bacteria | Pelagirhabdus alkalitolerans | 10 |
| Bacteria | Ralstonia sp. A12 | 1 |
| Invertebrates | Strongylocentrotus purpuratus | 6 |
| Bacteria | Pseudoalteromonas nigrifaciens | 1 |
| Bacteria | Terrimicrobium sacchariphilum | 3 |
| Bacteria | Yersinia enterocolitica LC20 | 5 |
| Bacteria | Mannheimia haemolytica serotype A1/A6 str. PKL10 | 2 |
| Primates | Macaca mulatta | 47 |
| Bacteria | Mesorhizobium sp. WSM3860 | 1 |
| Bacteria | Bacteroidetes bacterium | 4 |
| Bacteria | Pseudomonas sp. S06B 330 | 1 |
| Primates | Callithrix jacchus | 41 |
| Vertebrates | Poecilia latipinna | 29 |
| Vertebrates | Nothobranchius furzeri | 9 |
| Bacteria | Thermoanaerobacterium thermosaccharolyticum M0795 | 7 |
| Bacteria | Clostridiales bacterium AM23-16LB | 9 |
| Bacteria | Bacillus salacetis | 4 |
| Bacteria | Pasteurella multocida subsp. multocida str. Pm70 | 4 |
| Environmental samples | uncultured delta proteobacterium Rifle_16ft_4_minimus_37851 | 1 |
| Bacteria | Shigella boydii | 16 |
| Bacteria | Arthrobacter sp. SRS-W-1-2016 | 3 |
| Mammals | Bos taurus | 31 |
| Bacteria | Bacillus thuringiensis MC28 | 1 |
| Bacteria | Porticoccaceae bacterium | 8 |
| Bacteria | Alkalicoccus saliphilus | 6 |
| Bacteria | Sporanaerobacter acetigenes DSM 13106 | 10 |
| Bacteria | Bacillus sp. YR335 | 10 |
| Bacteria | Rhodobacterales bacterium 32-66-9 | 1 |
| Mammals | Sarcophilus harrisii | 11 |
| Invertebrates | Strigamia maritima | 3 |
| Environmental samples | uncultured Desulfobacterium sp. | 5 |
| Bacteria | Beggiatoa sp. 4572_84 | 1 |
| Bacteria | Phocoenobacter uteri | 5 |
| Bacteria | Paraliobacillus sp. PM-2 | 4 |
| Bacteria | Ruegeria lacuscaerulensis ITI-1157 | 1 |
| Bacteria | Lachnospira pectinoschiza | 2 |
| Bacteria | Acetivibrio ethanolgignens | 6 |
| Bacteria | Pseudomonas sp. MB-090624 | 1 |
| Invertebrates | Sarcoptes scabiei | 5 |
| Bacteria | Bacillus lehensis G1 | 10 |
| Bacteria | Paraburkholderia aspalathi | 2 |
| Bacteria | Listeria fleischmannii 1991 | 8 |
| Bacteria | Spirochaetaceae bacterium 4572_59 | 10 |
| Bacteria | Enterococcus hirae ATCC 9790 | 11 |
| Bacteria | Desulfobacteraceae bacterium IS3 | 5 |
| Bacteria | Blastopirellula sp. | 4 |
| Bacteria | Grimontia celer | 5 |
| Bacteria | Shewanella colwelliana | 1 |
| Bacteria | Bacillus galactosidilyticus | 6 |
| Bacteria | Treponema primitia ZAS-2 | 7 |
| Bacteria | [Haemophilus] felis | 3 |
| Bacteria | Enhydrobacter aerosaccus | 1 |
| Bacteria | Bradyrhizobium erythrophlei | 5 |
| Bacteria | Bacillus cytotoxicus NVH 391-98 | 2 |
| Bacteria | Halobacillus aidingensis | 6 |
| Invertebrates | Trichinella zimbabwensis | 13 |
| Bacteria | Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 | 4 |
| Bacteria | Thorsellia anophelis DSM 18579 | 4 |
| Bacteria | Salinispira pacifica | 6 |
| Bacteria | Salmonella enterica subsp. enterica serovar Orion | 5 |
| Bacteria | Brucella sp. BO2 | 1 |
| Bacteria | Acidaminococcus sp. AM33-14BH | 1 |
| Bacteria | Corynebacterium spheniscorum | 2 |
| Bacteria | Oceanisphaera psychrotolerans | 3 |
| Environmental samples | uncultured Dysgonomonas sp. | 1 |
| Invertebrates | Drosophila melanogaster | 19 |
| Bacteria | Corynebacterium sp. BCW_4722 | 1 |
| Invertebrates | Syphacia muris | 3 |
| Bacteria | Psychromonas sp. CNPT3 | 5 |
| Bacteria | Methylorubrum extorquens DSM 13060 | 1 |
| Bacteria | Atopobium sp. oral taxon 810 str. F0209 | 7 |
| Bacteria | Marinobacter sp. LQ44 | 1 |
| Bacteria | Escherichia coli 1-392-07_S4_C1 | 4 |
| Invertebrates | Cuerna arida | 3 |
| Bacteria | Mesorhizobium sp. Root172 | 2 |
| Invertebrates | Rhabditophanes sp. KR3021 | 4 |
| Bacteria | Erwinia mallotivora | 8 |
| Bacteria | Virgibacillus phasianinus | 6 |
| Bacteria | Bacillus smithii 7_3_47FAA | 4 |
| Bacteria | Pigmentiphaga sp. NML080357 | 1 |
| Vertebrates | Astatotilapia calliptera | 45 |
| Bacteria | Pasteurellaceae bacterium 15-036681 | 4 |
| Bacteria | Granulicatella balaenopterae | 11 |
| Bacteria | [Bacillus] selenitireducens MLS10 | 3 |
| Bacteria | Lactobacillus casei W56 | 9 |
| Bacteria | Bacillus sp. OV194 | 7 |
| Bacteria | Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_42_13 | 4 |
| Bacteria | Vibrio cholerae M66-2 | 7 |
| Bacteria | Alcanivorax sp. | 2 |
| Bacteria | Corynebacterium casei LMG S-19264 | 2 |
| Bacteria | Agrococcus jejuensis | 7 |
| Bacteria | Mycoplasma pneumoniae M129 | 3 |
| Bacteria | Pantoea alhagi | 5 |
| Invertebrates | Drosophila erecta | 18 |
| Bacteria | Domibacillus antri | 2 |
| Bacteria | Afipia broomeae | 1 |
| Bacteria | Cellvibrio japonicus Ueda107 | 1 |
| Bacteria | Olsenella uli MSTE5 | 4 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.AU.002.06.1.1 | 1 |
| Bacteria | Aggregatibacter aphrophilus | 3 |
| Bacteria | Staphylococcus xylosus | 4 |
| Bacteria | Bacillus weihaiensis | 5 |
| Bacteria | Lactobacillus sp. HMSC25A02 | 8 |
| Bacteria | Spirochaetes bacterium ADurb.Bin218 | 3 |
| Environmental samples | Eubacterium hallii CAG:12 | 5 |
| Bacteria | Leifsonia aquatica ATCC 14665 | 3 |
| Bacteria | Sphingobium czechense LL01 | 1 |
| Bacteria | Terribacillus sp. 7520-G | 6 |
| Bacteria | Staphylococcus lugdunensis | 6 |
| Bacteria | Escherichia coli O139:H28 str. E24377A | 5 |
| Bacteria | Lactobacillus equicursoris 66c | 2 |
| Bacteria | Bradyrhizobium icense | 1 |
| Bacteria | Simplicispira suum | 1 |
| Bacteria | Gilliamella apicola SCGC AB-598-I20 | 11 |
| Bacteria | Gracilibacillus dipsosauri | 14 |
| Bacteria | Vibrio vulnificus YJ016 | 10 |
| Bacteria | Olsenella sp. kh2p3 | 4 |
| Bacteria | Spiroplasma corruscae | 3 |
| Bacteria | Bacillus sp. AFS040349 | 5 |
| Bacteria | Listeria monocytogenes FSL F2-208 | 4 |
| Bacteria | Corynebacterium appendicis CIP 107643 | 1 |
| Bacteria | Syntrophorhabdus sp. PtaB.Bin006 | 2 |
| Bacteria | Chlorobaculum tepidum TLS | 2 |
| Bacteria | Malonomonas rubra DSM 5091 | 4 |
| Bacteria | Enterobacter sp. HMSC055A11 | 3 |
| Bacteria | Clostridium beijerinckii | 21 |
| Bacteria | Minicystis rosea | 2 |
| Invertebrates | Strongyloides stercoralis | 4 |
| Rodents | Heterocephalus glaber | 14 |
| Bacteria | Paenibacillus mucilaginosus K02 | 3 |
| Bacteria | Anaerostipes hadrus DSM 3319 | 13 |
| Bacteria | Bacillus sp. 1NLA3E | 8 |
| Bacteria | Paraburkholderia megapolitana | 2 |
| Bacteria | Bacillus filamentosus | 9 |
| Bacteria | Enterococcus faecalis EnGen0311 | 4 |
| Bacteria | Peptostreptococcus anaerobius | 3 |
| Bacteria | Alphaproteobacteria bacterium 65-7 | 1 |
| Bacteria | Clostridium sp. BL-8 | 14 |
| Bacteria | Oxalobacter formigenes HOxBLS | 1 |
| Bacteria | Sporomusa acidovorans DSM 3132 | 1 |
| Bacteria | Agrococcus lahaulensis | 3 |
| Bacteria | Dickeya zeae EC1 | 2 |
| Bacteria | Brachybacterium nesterenkovii | 2 |
| Bacteria | Pantoea stewartii subsp. stewartii DC283 | 4 |
| Bacteria | Chlamydia trachomatis | 46 |
| Bacteria | Rathayibacter iranicus | 4 |
| Bacteria | Exiguobacterium sp. S17 | 2 |
| Bacteria | Pajaroellobacter abortibovis | 1 |
| Bacteria | Hespellia stercorisuis DSM 15480 | 5 |
| Invertebrates | Anisakis simplex | 5 |
| Bacteria | Anaerofustis stercorihominis | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 | 10 |
| Bacteria | Clostridiaceae bacterium AF42-6 | 5 |
| Bacteria | Ignavibacteria bacterium RIFOXYA2_FULL_37_17 | 1 |
| Bacteria | Shimia haliotis | 1 |
| Bacteria | Paraburkholderia ginsengiterrae | 2 |
| Bacteria | Spiroplasma endosymbiont of Drosophila aldrichi | 1 |
| Bacteria | Succinatimonas hippei YIT 12066 | 3 |
| Bacteria | Mycolicibacterium smegmatis MC2 155 | 2 |
| Bacteria | Desulfovibrio sp. U5L | 1 |
| Bacteria | Facklamia ignava CCUG 37419 | 5 |
| Bacteria | Eubacterium sp. 3_1_31 | 17 |
| Bacteria | Brachyspira pilosicoli B2904 | 4 |
| Invertebrates | Trichobilharzia regenti | 4 |
| Bacteria | Streptococcus mitis | 4 |
| Bacteria | Erythrobacter marinus | 1 |
| Bacteria | Rhodoferax koreense | 1 |
| Bacteria | Faecalibacterium sp. An77 | 1 |
| Bacteria | Lactococcus garvieae | 5 |
| Bacteria | Listeria riparia FSL S10-1204 | 12 |
| Bacteria | Thiotrichaceae bacterium IS1 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 | 9 |
| Bacteria | Streptomyces sp. SolWspMP-5a-2 | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Senftenberg | 7 |
| Bacteria | Victivallis vadensis | 6 |
| Bacteria | Lonsdalea quercina | 6 |
| Bacteria | Escherichia coli O157:H7 str. EC869 | 9 |
| Bacteria | Roseomonas cervicalis ATCC 49957 | 3 |
| Bacteria | Vibrio genomosp. F10 | 3 |
| Bacteria | Streptococcus suis GZ1 | 3 |
| Bacteria | Anaerococcus hydrogenalis | 6 |
| Bacteria | Thermoanaerobacter wiegelii Rt8.B1 | 3 |
| Bacteria | Thermanaeromonas toyohensis ToBE | 3 |
| Bacteria | Sediminibacillus albus | 8 |
| Bacteria | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' | 2 |
| Bacteria | Treponema caldarium DSM 7334 | 8 |
| Bacteria | Dermabacter sp. HFH0086 | 2 |
| Bacteria | Oceanospirillaceae bacterium | 5 |
| Bacteria | Pseudomonas sp. SST3 | 3 |
| Bacteria | Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121 | 3 |
| Environmental samples | Roseburia sp. CAG:197 | 3 |
| Bacteria | Clostridium botulinum C/D str. BKT12695 | 1 |
| Bacteria | Escherichia coli ETEC H10407 | 7 |
| Bacteria | Selenomonas infelix ATCC 43532 | 1 |
| Bacteria | Rhizobium sp. CIAT894 | 1 |
| Bacteria | Superficieibacter electus | 24 |
| Bacteria | Lachnobacterium bovis | 1 |
| Bacteria | Hyphomicrobium sp. 32-62-53 | 1 |
| Bacteria | Verrucomicrobia bacterium ADurb.Bin070 | 7 |
| Bacteria | Oricola sp. | 1 |
| Bacteria | Pasteurellaceae bacterium 12565 | 4 |
| Environmental samples | mine drainage metagenome | 14 |
| Bacteria | Thermoanaerobacterium sp. RBIITD | 8 |
| Bacteria | Rhizobium sp. Root1203 | 2 |
| Bacteria | Sphingomonas sp. | 2 |
| Bacteria | Catellicoccus marimammalium M35/04/3 | 1 |
| Bacteria | Bacillus sonorensis L12 | 8 |
| Bacteria | Gallionella sp. | 2 |
| Invertebrates | Steinernema glaseri | 6 |
| Bacteria | Geobacillus sp. WCH70 | 5 |
| Bacteria | Aeromonas enteropelogenes | 2 |
| Bacteria | Lachnospiraceae bacterium 3_1_46FAA | 3 |
| Bacteria | Acetobacteraceae bacterium DB1506 | 2 |
| Bacteria | Streptomyces viridochromogenes | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhimurium | 11 |
| Bacteria | Chitinivibrio alkaliphilus ACht1 | 4 |
| Bacteria | Phycisphaerae bacterium SM-Chi-D1 | 3 |
| Bacteria | Fusobacterium necrophorum subsp. funduliforme 1_1_36S | 6 |
| Bacteria | Thermoflavimicrobium sp. FBKL4.011 | 5 |
| Bacteria | Ancylobacter aquaticus | 1 |
| Bacteria | Clostridium sartagoforme AAU1 | 15 |
| Bacteria | Verrucomicrobia bacterium ADurb.Bin122 | 3 |
| Bacteria | bacterium BMS3Abin04 | 2 |
| Bacteria | Sneathia amnii | 12 |
| Bacteria | Sphingomonas sp. Root241 | 1 |
| Bacteria | Vibrio gazogenes DSM 21264 = NBRC 103151 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_47_9 | 3 |
| Bacteria | Thermoanaerobacter thermohydrosulfuricus WC1 | 3 |
| Vertebrates | Ophiophagus hannah | 8 |
| Bacteria | Corynebacterium testudinoris | 1 |
| Bacteria | Cronobacter sakazakii 696 | 1 |
| Bacteria | Fusobacteriia bacterium 4572_132 | 4 |
| Invertebrates | Oryctes borbonicus | 2 |
| Bacteria | Lactobacillus ghanensis DSM 18630 | 8 |
| Bacteria | Pseudaminobacter manganicus | 4 |
| Bacteria | Desulfovibrio desulfuricans ND132 | 1 |
| Bacteria | Coprobacillus sp. CAG:235_29_27 | 2 |
| Bacteria | Pseudomonas coronafaciens pv. striafaciens | 2 |
| Bacteria | Actinosynnema pretiosum subsp. pretiosum | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_01_FULL_48_9 | 2 |
| Bacteria | Marinobacter sp. PWS21 | 1 |
| Bacteria | Betaproteobacteria bacterium MOLA814 | 1 |
| Bacteria | Bifidobacterium aquikefiri | 4 |
| Bacteria | Sphingomonas melonis TY | 1 |
| Bacteria | Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34 | 2 |
| Bacteria | Sphingobium yanoikuyae | 1 |
| Bacteria | Hoeflea marina | 2 |
| Bacteria | Streptomyces sp. 2314.4 | 1 |
| Bacteria | Escherichia coli 113303 | 4 |
| Bacteria | Lachnoclostridium sp. SNUG30370 | 1 |
| Bacteria | Staphylococcus sp. HGB0015 | 4 |
| Bacteria | Kordiimonas sp. | 1 |
| Bacteria | Fibrobacter intestinalis | 1 |
| Bacteria | Paenibacillus thermophilus | 8 |
| Environmental samples | Eubacterium sp. CAG:38 | 1 |
| Bacteria | Klebsiella variicola | 6 |
| Bacteria | Vibrio sp. qd031 | 4 |
| Bacteria | Gordonia rhizosphera NBRC 16068 | 2 |
| Bacteria | Exiguobacterium mexicanum | 1 |
| Invertebrates | Helobdella robusta | 8 |
| Bacteria | Streptomyces sp. NEAU-D10 | 3 |
| Bacteria | Hydrogenophaga intermedia | 1 |
| Bacteria | Bacillus sporothermodurans | 8 |
| Bacteria | Clostridium botulinum D str. 1873 | 2 |
| Bacteria | Alteromonadaceae bacterium | 6 |
| Invertebrates | Sycon ciliatum | 1 |
| Bacteria | Shigella dysenteriae 1617 | 7 |
| Bacteria | Candidatus Accumulibacter sp. | 1 |
| Bacteria | [Clostridium] clostridioforme 90A7 | 6 |
| Bacteria | Burkholderia sp. JS23 | 2 |
| Bacteria | Sphingomonas sanxanigenens DSM 19645 = NX02 | 1 |
| Bacteria | Hyphomonas sp. L-53-1-40 | 1 |
| Bacteria | Verrucomicrobia bacterium ADurb.Bin018 | 4 |
| Bacteria | Corynebacterium mastitidis | 2 |
| Bacteria | Labilithrix luteola | 2 |
| Bacteria | Rubrivirga marina | 5 |
| Bacteria | Gimesia maris DSM 8797 | 2 |
| Bacteria | Brevibacillus sp. CF112 | 2 |
| Bacteria | Mycetocola reblochoni REB411 | 4 |
| Vertebrates | Lonchura striata domestica | 9 |
| Bacteria | Selenomonas artemidis F0399 | 1 |
| Vertebrates | Anolis carolinensis | 10 |
| Bacteria | Staphylococcus simiae CCM 7213 = CCUG 51256 | 4 |
| Bacteria | Fibrobacter sp. UWB2 | 1 |
| Bacteria | Lachnospiraceae bacterium JC7 | 3 |
| Bacteria | Clostridium magnum DSM 2767 | 7 |
| Bacteria | Pantoea cypripedii | 3 |
| Bacteria | Rothia nasimurium | 2 |
| Bacteria | Paracoccus zhejiangensis | 1 |
| Bacteria | Acetobacterium woodii DSM 1030 | 2 |
| Bacteria | Methylocystis sp. MitZ-2018 | 1 |
| Bacteria | Treponema pallidum subsp. pallidum str. Nichols | 2 |
| Bacteria | Enterococcus silesiacus | 10 |
| Bacteria | Sphingorhabdus sp. GY_G | 1 |
| Bacteria | Vibrio parahaemolyticus V-223/04 | 6 |
| Bacteria | Planctomycetes bacterium RBG_16_43_13 | 3 |
| Bacteria | Streptococcus suis 05ZYH33 | 4 |
| Bacteria | Thiothrix nivea | 1 |
| Bacteria | Auricoccus indicus | 2 |
| Bacteria | Porticoccus sp. | 1 |
| Bacteria | bacterium HR37 | 1 |
| Bacteria | Streptomyces sp. ICC1 | 2 |
| Bacteria | Caulobacter sp. K31 | 1 |
| Bacteria | Pasteurellaceae bacterium 12591 | 1 |
| Bacteria | Serratia symbiotica str. Tucson | 2 |
| Bacteria | Alishewanella sp. WH16-1 | 1 |
| Bacteria | Pseudoalteromonas amylolytica | 1 |
| Bacteria | Ilyobacter polytropus DSM 2926 | 11 |
| Bacteria | Leifsonia sp. Root60 | 3 |
| Bacteria | Rhodobacteraceae bacterium | 15 |
| Bacteria | Idiomarina sediminum | 1 |
| Bacteria | Abyssicoccus albus | 1 |
| Bacteria | Rhodococcus coprophilus | 1 |
| Bacteria | Aureimonas sp. Leaf460 | 2 |
| Environmental samples | uncultured Pleomorphomonas sp. | 3 |
| Bacteria | Rhizobium pisi | 2 |
| Bacteria | Microbacterium sp. C448 | 3 |
| Bacteria | Novosphingobium sp. SCN 66-18 | 1 |
| Bacteria | Tatumella ptyseos ATCC 33301 | 2 |
| Bacteria | Sinorhizobium fredii HH103 | 2 |
| Bacteria | Betaproteobacteria bacterium RBG_16_58_11 | 1 |
| Bacteria | Vibrio alginolyticus | 5 |
| Bacteria | candidate division Zixibacteria bacterium SM23_73_2 | 2 |
| Bacteria | Trichococcus collinsii | 2 |
| Bacteria | Aneurinibacillus migulanus | 1 |
| Bacteria | Pseudomonas fluorescens HK44 | 3 |
| Bacteria | Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9 | 4 |
| Bacteria | Weissella hellenica | 4 |
| Bacteria | Roseovarius albus | 1 |
| Bacteria | Arenimonas composti TR7-09 = DSM 18010 | 1 |
| Bacteria | Streptomyces sp. NRRL B-1568 | 1 |
| Bacteria | Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) | 2 |
| Bacteria | Bacillus hisashii | 5 |
| Bacteria | Bordetella sp. H567 | 1 |
| Environmental samples | Ruminococcus sp. CAG:330 | 1 |
| Bacteria | Pseudomonas sp. C 49-2 | 3 |
| Bacteria | Cedecea sp. NFIX57 | 1 |
| Bacteria | Microbacterium ketosireducens | 3 |
| Bacteria | Bordetella hinzii | 1 |
| Bacteria | Thermovenabulum gondwanense | 5 |
| Bacteria | Enterococcus faecalis ERV93 | 2 |
| Bacteria | Candidatus Coatesbacteria bacterium RBG_13_66_14 | 2 |
| Bacteria | Curtobacterium sp. MR_MD2014 | 3 |
| Bacteria | Virgibacillus sp. SK37 | 5 |
| Bacteria | Pseudomonas acidophila | 2 |
| Bacteria | Exiguobacterium sp. BMC-KP | 1 |
| Bacteria | Terrisporobacter glycolicus | 4 |
| Bacteria | Lactobacillus paralimentarius DSM 13238 = JCM 10415 | 6 |
| Bacteria | Enterococcus saccharolyticus | 7 |
| Bacteria | Pseudomonas sp. 10-1B | 1 |
| Bacteria | Nevskiales bacterium | 1 |
| Vertebrates | Mesitornis unicolor | 2 |
| Bacteria | Vibrio hangzhouensis | 2 |
| Bacteria | Spirochaetes bacterium RBG_16_67_19 | 5 |
| Bacteria | Blautia sp. SF-50 | 1 |
| Bacteria | Citreimonas salinaria | 1 |
| Bacteria | [Collinsella] massiliensis | 13 |
| Bacteria | Verrucomicrobiales bacterium VVV1 | 4 |
| Bacteria | Gallibacterium salpingitidis | 6 |
| Bacteria | Escherichia coli UMEA 3200-1 | 2 |
| Bacteria | Firmicutes bacterium HGW-Firmicutes-5 | 1 |
| Bacteria | Pseudomonas bauzanensis | 3 |
| Bacteria | Corynebacterium variabile DSM 44702 | 1 |
| Bacteria | Clostridium sp. AM43-3BH | 1 |
| Bacteria | Thermoflavimicrobium dichotomicum | 5 |
| Bacteria | Nocardiopsis sp. L17-MgMaSL7 | 1 |
| Bacteria | Atlantibacter hermannii NBRC 105704 | 6 |
| Bacteria | Bacillus caseinilyticus | 16 |
| Bacteria | Actibacterium atlanticum | 1 |
| Bacteria | Glutamicibacter halophytocola | 2 |
| Bacteria | Pseudomonas sp. 5 | 1 |
| Bacteria | Rhodobacter sp. CACIA14H1 | 1 |
| Bacteria | Wenzhouxiangella marina | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG23_combo_of_CG06-09_8_20_14_all_41_10 | 1 |
| Bacteria | Mesorhizobium sp. STM 4661 | 2 |
| Invertebrates | Arion vulgaris | 11 |
| Bacteria | Streptomyces sp. 2321.6 | 3 |
| Bacteria | Salmonella enterica subsp. diarizonae | 6 |
| Bacteria | Janthinobacterium sp. HH106 | 1 |
| Bacteria | Staphylococcus aureus subsp. aureus CN1 | 3 |
| Bacteria | Lactobacillus sp. UMNPBX2 | 2 |
| Environmental samples | sediment metagenome | 1 |
| Bacteria | Pseudomonas asplenii | 3 |
| Bacteria | Streptococcus sp. HMSC072G04 | 2 |
| Bacteria | Sediminibacillus halophilus | 11 |
| Bacteria | Methylobacterium variabile | 1 |
| Bacteria | Desulfomonile tiedjei DSM 6799 | 2 |
| Bacteria | Thiomonas sp. CB3 | 2 |
| Bacteria | Haloferax volcanii DS2 | 3 |
| Bacteria | Thermobifida halotolerans | 1 |
| Bacteria | Pseudoalteromonas sp. P1-9 | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_12_55_13 | 2 |
| Bacteria | Labrenzia sp. VG12 | 1 |
| Bacteria | Lactobacillus harbinensis DSM 16991 | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | 11 |
| Bacteria | Sedimentisphaera salicampi | 3 |
| Bacteria | Faecalicatena contorta | 5 |
| Bacteria | Catenovulum sp. CCB-QB4 | 1 |
| Bacteria | Streptomyces sp. KPB2 | 2 |
| Bacteria | Pseudomonas segetis | 2 |
| Bacteria | Enterococcus faecalis EnGen0354 | 7 |
| Bacteria | Escherichia coli 2362-75 | 4 |
| Bacteria | Lactobacillus sp. ESL0233 | 1 |
| Bacteria | Lactobacillus rodentium | 2 |
| Bacteria | Bacillus alcalophilus ATCC 27647 = CGMCC 1.3604 | 3 |
| Vertebrates | Limosa lapponica baueri | 5 |
| Bacteria | Opitutae bacterium Tous-C5TDCM | 2 |
| Bacteria | [Clostridium] symbiosum WAL-14163 | 3 |
| Bacteria | Rhodobacter veldkampii DSM 11550 | 1 |
| Bacteria | Burkholderia sp. lig30 | 1 |
| Bacteria | Providencia stuartii MRSN 2154 | 4 |
| Bacteria | Tepidiphilus thermophilus | 1 |
| Bacteria | Dorea sp. AF36-15AT | 10 |
| Bacteria | Pseudomonas moorei | 3 |
| Bacteria | Abiotrophia sp. HMSC24B09 | 4 |
| Bacteria | Deinococcus reticulitermitis | 1 |
| Bacteria | Marinilactibacillus psychrotolerans 42ea | 8 |
| Bacteria | Alkalispirochaeta sphaeroplastigenens | 1 |
| Bacteria | Escherichia coli O111:H- str. 11128 | 3 |
| Rodents | Neotoma lepida | 7 |
| Bacteria | Bifidobacterium stellenboschense | 1 |
| Bacteria | Staphylococcus aureus subsp. aureus 71193 | 1 |
| Bacteria | Exiguobacterium sp. N4-1P | 4 |
| Bacteria | Enterococcus faecium OC2A-1 | 9 |
| Bacteria | Aliivibrio fischeri ES114 | 9 |
| Bacteria | Bacillus cohnii | 3 |
| Bacteria | Escherichia coli 4.0522 | 3 |
| Bacteria | Agrobacterium bohemicum | 1 |
| Invertebrates | Aedes aegypti | 7 |
| Bacteria | Candidatus Xiphinematobacter sp. Idaho Grape | 2 |
| Bacteria | Gracilibacillus kekensis | 6 |
| Bacteria | Microbacterium azadirachtae | 3 |
| Bacteria | Staphylococcus hyicus | 9 |
| Bacteria | Cellulomonas sp. KH9 | 1 |
| Bacteria | Streptomyces sp. Act143 | 2 |
| Bacteria | Geobacillus sp. 1017 | 1 |
| Bacteria | Roseibium sp. TrichSKD4 | 1 |
| Bacteria | Yersinia pseudotuberculosis YPIII | 1 |
| Bacteria | Shigella boydii 965-58 | 2 |
| Bacteria | Paenibacillus catalpae | 2 |
| Bacteria | Enterovibrio norvegicus FF-454 | 6 |
| Bacteria | Vibrio sp. ER1A | 1 |
| Bacteria | Actinobacteria bacterium OK074 | 1 |
| Bacteria | Clostridium sp. OF10-22XD | 1 |
| Bacteria | Bacillus pseudofirmus OF4 | 4 |
| Bacteria | Janthinobacterium lividum | 1 |
| Bacteria | Vibrio caribbeanicus | 2 |
| Bacteria | Streptomyces leeuwenhoekii | 1 |
| Bacteria | Cryobacterium sp. LW097 | 2 |
| Bacteria | Pediococcus damnosus | 2 |
| Bacteria | Arthrobacter sp. NIO-1057 | 1 |
| Bacteria | Streptomyces sp. CB03234 | 1 |
| Bacteria | Bacillus sp. AFS055030 | 2 |
| Bacteria | bacterium YEK0313 | 1 |
| Bacteria | Nitratireductor sp. StC3 | 1 |
| Bacteria | Geobacillus kaustophilus HTA426 | 4 |
| Bacteria | Pararhodobacter sp. AM505 | 1 |
| Bacteria | Ketogulonicigenium vulgare Y25 | 1 |
| Bacteria | Latescibacteria bacterium DG_63 | 3 |
| Bacteria | Staphylococcus carnosus subsp. carnosus TM300 | 5 |
| Bacteria | Pediococcus acidilactici DSM 20284 | 8 |
| Bacteria | Caballeronia sordidicola | 1 |
| Bacteria | Brachybacterium sp. VM2412 | 3 |
| Bacteria | Oleiphilus sp. HI0009 | 2 |
| Bacteria | Enterococcus caccae ATCC BAA-1240 | 6 |
| Bacteria | Eubacterium plexicaudatum ASF492 | 2 |
| Bacteria | Duganella sp. Root198D2 | 1 |
| Invertebrates | Crassostrea gigas | 8 |
| Bacteria | Corynebacterium sp. ATCC 6931 | 1 |
| Bacteria | Lactobacillus mucosae | 3 |
| Bacteria | Brachyspira hampsonii 30446 | 1 |
| Bacteria | Escherichia coli MS 69-1 | 4 |
| Bacteria | Burkholderia sp. YR290 | 1 |
| Bacteria | Xenorhabdus doucetiae | 2 |
| Bacteria | Rodentibacter genomosp. 1 | 1 |
| Bacteria | Leuconostoc kimchii IMSNU 11154 | 3 |
| Bacteria | Elusimicrobia bacterium RIFOXYD2_FULL_34_15 | 1 |
| Bacteria | Aeromonas molluscorum 848 | 2 |
| Bacteria | Rhodobacterales bacterium Y4I | 1 |
| Bacteria | Yersinia enterocolitica W22703 | 3 |
| Bacteria | Photobacterium proteolyticum | 2 |
| Bacteria | Polaromonas sp. 28-63-22 | 1 |
| Bacteria | Halomonas sp. WRN001 | 1 |
| Bacteria | Vibrio tubiashii | 1 |
| Bacteria | Arthrobacter humicola | 1 |
| Bacteria | Erythrobacter sp. 34-65-8 | 1 |
| Bacteria | Ochrobactrum oryzae | 1 |
| Bacteria | Bartonella vinsonii subsp. arupensis OK-94-513 | 1 |
| Bacteria | Desulfobacteraceae bacterium 4484_190.3 | 3 |
| Bacteria | Elusimicrobia bacterium GWA2_69_24 | 3 |
| Bacteria | Rubricoccus marinus | 4 |
| Bacteria | Desulfurella acetivorans A63 | 1 |
| Bacteria | Selenomonas sp. FOBRC6 | 2 |
| Bacteria | Acinetobacter qingfengensis | 2 |
| Bacteria | Neisseria sp. HMSC055F11 | 1 |
| Bacteria | Novosphingobium sp. SCN 63-17 | 2 |
| Bacteria | Sphingobium faniae | 1 |
| Bacteria | Myxococcales bacterium 68-20 | 2 |
| Bacteria | Thauera sp. SWB20 | 1 |
| Bacteria | Sulfitobacter brevis | 1 |
| Bacteria | Mycolicibacterium litorale | 2 |
| Bacteria | Microvirgula sp. AG722 | 1 |
| Bacteria | Vogesella sp. LIG4 | 2 |
| Bacteria | Paenibacillus borealis | 4 |
| Bacteria | Gemella morbillorum M424 | 4 |
| Bacteria | Terasakiispira papahanaumokuakeensis | 2 |
| Bacteria | Aggregatibacter actinomycetemcomitans serotype b str. SCC1398 | 2 |
| Bacteria | Anaerococcus vaginalis ATCC 51170 | 4 |
| Bacteria | endosymbiont of Riftia pachyptila (vent Ph05) | 1 |
| Bacteria | Ralstonia solanacearum | 3 |
| Bacteria | Rhizobium sp. Leaf371 | 1 |
| Bacteria | Burkholderiales bacterium PBB2 | 1 |
| Bacteria | Paenibacillus sp. DMB20 | 2 |
| Bacteria | Cetobacterium ceti | 10 |
| Bacteria | Rhodopirellula sp. SM50 | 4 |
| Bacteria | Pseudomonadales bacterium | 2 |
| Bacteria | Chlamydia trachomatis 434/Bu | 2 |
| Bacteria | Leptothrix cholodnii SP-6 | 1 |
| Bacteria | Vibrio owensii CAIM 1854 = LMG 25443 | 3 |
| Bacteria | Paenibacillus prosopidis | 3 |
| Invertebrates | Pediculus humanus corporis | 2 |
| Bacteria | Chloroflexi bacterium RBG_13_66_10 | 1 |
| Environmental samples | Eubacterium sp. CAG:156 | 2 |
| Bacteria | Acidiferrobacteraceae bacterium | 9 |
| Bacteria | Deltaproteobacteria bacterium GWA2_45_12 | 1 |
| Bacteria | Streptomyces sp. Ru71 | 1 |
| Bacteria | Fervidobacterium thailandense | 1 |
| Bacteria | Halomonas beimenensis | 2 |
| Invertebrates | Penaeus vannamei | 1 |
| Bacteria | Bacillus fortis | 2 |
| Bacteria | Photobacterium kishitanii | 1 |
| Bacteria | Rhizobium sullae | 1 |
| Bacteria | Enterobacter sp. DC4 | 1 |
| Bacteria | Novosphingobium sp. LASN5T | 1 |
| Bacteria | Sphingomonas sp. Leaf407 | 1 |
| Bacteria | Mycolicibacterium gilvum PYR-GCK | 2 |
| Bacteria | Alteromonas pelagimontana | 1 |
| Bacteria | Miniimonas sp. PCH200 | 3 |
| Environmental samples | Roseburia sp. CAG:309 | 1 |
| Bacteria | Marinobacter mobilis | 1 |
| Environmental samples | uncultured Butyricicoccus sp. | 2 |
| Bacteria | Pelomonas sp. Root1444 | 1 |
| Bacteria | Staphylococcus sciuri | 1 |
| Bacteria | Blastococcus sp. DSM 46838 | 2 |
| Bacteria | Nitrospinae bacterium RIFCSPLOWO2_12_39_16 | 1 |
| Bacteria | Chlamydia sp. 32-24 | 2 |
| Bacteria | Micrococcales bacterium 72-143 | 3 |
| Bacteria | Haemophilus pittmaniae HK 85 | 2 |
| Bacteria | Vibrio harveyi 1DA3 | 2 |
| Bacteria | Phycisphaera mikurensis NBRC 102666 | 3 |
| Bacteria | Chromohalobacter canadensis | 1 |
| Bacteria | Alicycliphilus sp. B1 | 2 |
| Bacteria | Peptoclostridium sp. AF21-18 | 1 |
| Bacteria | Dietzia timorensis | 1 |
| Bacteria | Entomoplasma luminosum | 5 |
| Bacteria | Proteus mirabilis HI4320 | 2 |
| Bacteria | Brachybacterium ginsengisoli | 5 |
| Bacteria | Thioclava arenosa | 1 |
| Bacteria | Planctomycetes bacterium RBG_13_62_9 | 5 |
| Bacteria | Streptomyces sp. Ag109_O5-10 | 1 |
| Bacteria | Bacillus sp. 7884-1 | 3 |
| Bacteria | Mesorhizobium ephedrae | 2 |
| Bacteria | Methylophaga thiooxydans DMS010 | 2 |
| Bacteria | Paraburkholderia phenoliruptrix BR3459a | 1 |
| Bacteria | Spiroplasma endosymbiont of Drosophila hydei | 1 |
| Bacteria | Leptotrichia wadei F0279 | 3 |
| Invertebrates | Anopheles culicifacies | 3 |
| Bacteria | Lactobacillus fabifermentans T30PCM01 | 8 |
| Bacteria | Actinobacteria bacterium OV450 | 1 |
| Bacteria | Rhizobium sp. RU20A | 1 |
| Bacteria | Paraburkholderia sp. S27 | 2 |
| Bacteria | Rhodohalobacter barkolensis | 3 |
| Bacteria | Lactobacillus acidophilus NCFM | 2 |
| Bacteria | Pusillimonas sp. | 1 |
| Bacteria | Mycoplasma bovoculi M165/69 | 2 |
| Bacteria | Pseudomonas cremoricolorata | 2 |
| Bacteria | Lysobacter sp. ZS60 | 1 |
| Bacteria | Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 | 1 |
| Bacteria | Pelomonas puraquae | 1 |
| Bacteria | Paenibacillus riograndensis | 3 |
| Bacteria | Streptococcus equi subsp. zooepidemicus H70 | 5 |
| Bacteria | Sphingomonadaceae bacterium PASS1 | 1 |
| Bacteria | Collinsella tanakaei | 1 |
| Invertebrates | Tropilaelaps mercedesae | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Weltevreden | 5 |
| Bacteria | Haloferax mucosum ATCC BAA-1512 | 1 |
| Bacteria | Bifidobacterium bifidum NCIMB 41171 | 1 |
| Bacteria | Shewanella violacea DSS12 | 1 |
| Bacteria | Shigella boydii CDC 3083-94 | 2 |
| Bacteria | Sanguibacter antarcticus | 1 |
| Bacteria | Rhodobacterales bacterium CG2_30_65_12 | 1 |
| Bacteria | Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 | 1 |
| Bacteria | Syntrophorhabdus sp. PtaB.Bin184 | 1 |
| Bacteria | Photobacterium profundum 3TCK | 4 |
| Bacteria | Desulfallas geothermicus DSM 3669 | 1 |
| Bacteria | Corynebacterium pseudogenitalium ATCC 33035 | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.08.2.1 | 1 |
| Bacteria | Vibrio crassostreae | 1 |
| Bacteria | Vibrio sp. V02_P2A34T13 | 3 |
| Bacteria | Pseudomonas stutzeri | 7 |
| Bacteria | Martelella endophytica | 2 |
| Bacteria | Acidithiobacillus ferrivorans | 1 |
| Bacteria | Saliterribacillus persicus | 5 |
| Bacteria | Haemophilus haemolyticus M21639 | 1 |
| Bacteria | Vibrio parahaemolyticus 49 | 3 |
| Bacteria | Paenibacillus thiaminolyticus | 2 |
| Bacteria | Oxalobacter formigenes OXCC13 | 1 |
| Bacteria | Streptomyces sp. 2114.4 | 3 |
| Bacteria | Leptospira weilii str. LNT 1234 | 1 |
| Bacteria | Lactobacillus ultunensis DSM 16047 | 2 |
| Bacteria | Sphingobium sp. TKS | 1 |
| Bacteria | Alistipes onderdonkii | 1 |
| Bacteria | Edwardsiella anguillarum ET080813 | 3 |
| Environmental samples | Firmicutes bacterium CAG:56 | 1 |
| Bacteria | Diaphorobacter nitroreducens | 1 |
| Bacteria | Corynebacterium epidermidicanis | 1 |
| Bacteria | Paenibacillus sophorae | 1 |
| Bacteria | Rhizobiaceae bacterium | 1 |
| Bacteria | Escherichia coli MS 85-1 | 3 |
| Bacteria | Halococcus hamelinensis 100A6 | 1 |
| Bacteria | Syntrophorhabdaceae bacterium PtaU1.Bin034 | 2 |
| Bacteria | Paenibacillus sp. FSL R5-192 | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.14.1.1 | 1 |
| Bacteria | bacterium E08(2017) | 2 |
| Bacteria | Glaesserella parasuis 29755 | 2 |
| Bacteria | Escherichia coli KTE75 | 3 |
| Bacteria | Rhizobium rhizosphaerae | 2 |
| Bacteria | Xanthomonas campestris pv. campestris str. B100 | 1 |
| Bacteria | Lachnotalea glycerini | 4 |
| Bacteria | Longibacter salinarum | 2 |
| Bacteria | Staphylococcus aureus subsp. aureus USA300_TCH959 | 2 |
| Bacteria | Anoxybacillus amylolyticus | 3 |
| Bacteria | Lachnospiraceae bacterium AM25-17 | 1 |
| Bacteria | Streptococcus sp. AS20 | 1 |
| Bacteria | Limimonas halophila | 1 |
| Environmental samples | Clostridium sp. CAG:411 | 1 |
| Bacteria | Ensifer sp. MMN_5 | 1 |
| Bacteria | Paracoccus sediminis | 1 |
| Bacteria | Tumebacillus flagellatus | 3 |
| Bacteria | Microbacterium sp. CH12i | 2 |
| Bacteria | Achromobacter denitrificans | 1 |
| Bacteria | Lysinibacillus fusiformis ZC1 | 1 |
| Bacteria | Enterococcus asini ATCC 700915 | 5 |
| Bacteria | Streptomyces ambofaciens ATCC 23877 | 1 |
| Bacteria | Bacillus sp. FJAT-27231 | 1 |
| Bacteria | Rhodoplanes elegans | 1 |
| Bacteria | Cupriavidus plantarum | 1 |
| Bacteria | Microbacterium pygmaeum | 3 |
| Bacteria | Caldisericum exile AZM16c01 | 2 |
| Bacteria | Brachybacterium sp. P6-10-X1 | 4 |
| Bacteria | Rhizobium sp. ACO-34A | 2 |
| Bacteria | Coraliomargarita akajimensis DSM 45221 | 2 |
| Bacteria | Microbacterium sorbitolivorans | 4 |
| Bacteria | Desulfovibrio alkalitolerans DSM 16529 | 2 |
| Bacteria | Streptococcus sp. HSISB1 | 2 |
| Bacteria | Borreliella afzelii PKo | 2 |
| Bacteria | Elusimicrobia bacterium GWA2_64_40 | 2 |
| Bacteria | Gluconacetobacter liquefaciens | 1 |
| Bacteria | Mesorhizobium sp. LSHC420B00 | 2 |
| Bacteria | Waddlia chondrophila 2032/99 | 2 |
| Bacteria | Agathobacter ruminis | 4 |
| Bacteria | [Clostridium] spiroforme DSM 1552 | 3 |
| Bacteria | Variovorax paradoxus B4 | 1 |
| Bacteria | Celeribacter baekdonensis B30 | 1 |
| Bacteria | Sphingomonas sp. Leaf67 | 1 |
| Bacteria | Ruminococcus sp. | 1 |
| Bacteria | Salmonella bongori serovar 66:z41:- str. SA19983605 | 1 |
| Bacteria | Pseudoalteromonas haloplanktis TAC125 | 1 |
| Invertebrates | Anopheles darlingi | 2 |
| Environmental samples | uncultured Thiohalocapsa sp. PB-PSB1 | 1 |
| Bacteria | Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 | 1 |
| Bacteria | Mycoplasma capricolum subsp. capricolum ATCC 27343 | 2 |
| Bacteria | Brucella abortus str. 2308 A | 1 |
| Bacteria | Slackia heliotrinireducens DSM 20476 | 1 |
| Bacteria | Streptomyces sp. WM6378 | 2 |
| Bacteria | Propionibacterium freudenreichii subsp. freudenreichii | 1 |
| Bacteria | bacterium HR07 | 1 |
| Bacteria | Pseudomonas sp. PGPPP3 | 1 |
| Bacteria | Brucella pinnipedialis M292/94/1 | 1 |
| Bacteria | Dermabacter hominis 1368 | 1 |
| Bacteria | Lactobacillus nagelii | 2 |
| Bacteria | Donghicola sp. JL3646 | 1 |
| Bacteria | Ornithinimicrobium pekingense | 1 |
| Bacteria | Caldisalinibacter kiritimatiensis | 8 |
| Bacteria | Providencia sp. WCHPr000369 | 1 |
| Bacteria | Burkholderiales bacterium PBB6 | 1 |
| Bacteria | Verrucomicrobia bacterium ADurb.Bin006 | 3 |
| Bacteria | Paracoccus sanguinis | 1 |
| Bacteria | Mycobacterium sp. KMS | 1 |
| Bacteria | Aliivibrio sp. 1S175 | 4 |
| Bacteria | Halomonas sp. 54_146 | 1 |
| Bacteria | Massilimicrobiota sp. An134 | 3 |
| Bacteria | Actinomyces sp. Z5 | 2 |
| Bacteria | Enterococcus sp. 4E1_DIV0656 | 3 |
| Bacteria | bacterium C-53 | 2 |
| Bacteria | Novosphingobium sp. P6W | 2 |
| Bacteria | Candidatus Muproteobacteria bacterium RBG_16_65_34 | 1 |
| Bacteria | Francisella tularensis subsp. novicida | 1 |
| Bacteria | Salipiger aestuarii | 1 |
| Bacteria | Aureimonas altamirensis | 1 |
| Bacteria | Yuhushiella deserti | 1 |
| Bacteria | Neisseria meningitidis alpha14 | 1 |
| Bacteria | Stenotrophomonas sp. ESTM1D_MKCIP4_1 | 1 |
| Bacteria | Staphylococcus felis | 5 |
| Bacteria | Enterobacter sp. 638 | 2 |
| Bacteria | Rhizobium etli bv. phaseoli str. IE4803 | 2 |
| Invertebrates | Caenorhabditis tropicalis | 5 |
| Bacteria | Bradyrhizobium sp. UFLA 03-321 | 1 |
| Bacteria | Pseudomonas savastanoi pv. phaseolicola | 1 |
| Bacteria | Elusimicrobia bacterium RIFOXYB2_FULL_62_6 | 1 |
| Bacteria | Staphylococcus arlettae | 2 |
| Bacteria | Microbacterium sp. | 4 |
| Bacteria | Mycoplasma mobile 163K | 1 |
| Invertebrates | Strongyloides papillosus | 4 |
| Bacteria | Zavarzinia sp. HR-AS | 1 |
| Environmental samples | uncultured Latescibacteria bacterium | 1 |
| Bacteria | Phycisphaera sp. TMED24 | 3 |
| Bacteria | Clostridium chauvoei JF4335 | 3 |
| Bacteria | Megasphaera elsdenii | 2 |
| Bacteria | blood disease bacterium R229 | 1 |
| Bacteria | Streptomyces sp. M1013 | 1 |
| Bacteria | Pseudoalteromonas sp. NC201 | 1 |
| Bacteria | Kibdelosporangium phytohabitans | 1 |
| Bacteria | Bacillus sp. Soil768D1 | 2 |
| Bacteria | Bacillus mycoides | 3 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.AU.001.01.1.1 | 1 |
| Bacteria | Nocardiopsis sp. JB363 | 1 |
| Bacteria | Ruegeria denitrificans | 1 |
| Bacteria | Agromyces sp. Soil535 | 2 |
| Bacteria | Neisseria bacilliformis ATCC BAA-1200 | 1 |
| Bacteria | Deltaproteobacteria bacterium 13_1_40CM_3_71_4 | 1 |
| Bacteria | Rhizobium aethiopicum | 1 |
| Bacteria | Alteribacillus persepolensis | 3 |
| Bacteria | Kibdelosporangium aridum | 1 |
| Bacteria | Arthrobacter sp. MDT2-14 | 3 |
| Bacteria | Glaciimonas sp. PCH181 | 1 |
| Bacteria | Nocardia fluminea | 1 |
| Bacteria | Paraglaciecola arctica BSs20135 | 1 |
| Bacteria | Clostridium sp. AM33-3 | 1 |
| Bacteria | Marinobacter similis | 1 |
| Bacteria | [Eubacterium] yurii subsp. margaretiae ATCC 43715 | 1 |
| Bacteria | Pelagibacterium sp. SCN 63-23 | 2 |
| Bacteria | Paenibacillus xerothermodurans | 4 |
| Bacteria | Streptomyces shenzhenensis | 2 |
| Bacteria | Desulfobacterales bacterium C00003060 | 1 |
| Bacteria | Sphingomonas sp. 66-10 | 1 |
| Bacteria | Syntrophus sp. RIFOXYC2_FULL_54_9 | 1 |
| Bacteria | Nonomuraea sp. KC333 | 1 |
| Bacteria | Xanthomonas campestris pv. campestris str. ATCC 33913 | 2 |
| Bacteria | Caulobacter mirabilis | 1 |
| Bacteria | Spirochaetes bacterium GWB1_36_13 | 5 |
| Bacteria | Geobacillus sp. MAS1 | 1 |
| Bacteria | Lautropia sp. SCN 69-89 | 1 |
| Bacteria | Roseburia faecis | 2 |
| Bacteria | Thioalkalivibrio sp. ALE21 | 1 |
| Bacteria | Nitrospirillum amazonense CBAmc | 3 |
| Bacteria | Flavonifractor plautii | 1 |
| Bacteria | Chlamydia suis | 1 |
| Invertebrates | Pocillopora damicornis | 5 |
| Bacteria | Glutamicibacter sp. BW78 | 1 |
| Bacteria | Fusobacterium mortiferum | 4 |
| Bacteria | Thermoflexus hugenholtzii JAD2 | 1 |
| Bacteria | Pseudoalteromonas rubra | 2 |
| Bacteria | Xylophilus sp. Leaf220 | 1 |
| Bacteria | Agreia sp. Leaf210 | 4 |
| Bacteria | Paenibacillus sp. JCM 10914 | 4 |
| Bacteria | Xanthomonas oryzae pv. oryzae KACC 10331 | 2 |
| Bacteria | Verrucomicrobia bacterium 13_1_20CM_4_55_9 | 1 |
| Bacteria | Coprococcus sp. AF21-14LB | 2 |
| Bacteria | Chlorobium phaeobacteroides BS1 | 1 |
| Bacteria | Curtobacterium oceanosedimentum | 1 |
| Bacteria | Confluentimicrobium lipolyticum | 1 |
| Bacteria | Staphylococcus epidermidis | 4 |
| Bacteria | Desulfurivibrio alkaliphilus AHT 2 | 1 |
| Bacteria | Albimonas pacifica | 1 |
| Bacteria | Frankia sp. EAN1pec | 1 |
| Bacteria | Rhodobacter capsulatus | 1 |
| Bacteria | Photobacterium marinum | 3 |
| Bacteria | Ignavibacteria bacterium RIFOXYD12_FULL_36_8 | 1 |
| Bacteria | Prauserella shujinwangii | 1 |
| Bacteria | Streptococcus pseudopneumoniae IS7493 | 1 |
| Bacteria | Staphylococcus equorum subsp. equorum | 3 |
| Bacteria | Pseudomonas saponiphila | 2 |
| Bacteria | Thalassospira sp. HJ | 1 |
| Bacteria | Gemmatirosa kalamazoonesis | 2 |
| Bacteria | Coxiella sp. DG_40 | 3 |
| Invertebrates | Intoshia linei | 3 |
| Invertebrates | Nasonia vitripennis | 3 |
| Bacteria | Pseudomonas balearica DSM 6083 | 1 |
| Bacteria | Acidovorax sp. CF316 | 1 |
| Bacteria | Burkholderiales bacterium 1_1_47 | 1 |
| Bacteria | Streptomyces sp. 2112.5 | 1 |
| Bacteria | Rheinheimera nanhaiensis E407-8 | 1 |
| Bacteria | Lactobacillus amylovorus GRL 1112 | 1 |
| Bacteria | Leptospira sp. P2653 | 1 |
| Bacteria | Gemmatimonadetes bacterium 13_2_20CM_1_69_27 | 1 |
| Bacteria | candidate division Zixibacteria bacterium RBG_16_48_11 | 1 |
| Bacteria | Xanthomonas vasicola pv. vasculorum NCPPB 206 | 1 |
| Bacteria | Variovorax sp. MHTC-1 | 2 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 | 1 |
| Bacteria | Lysinibacillus varians | 1 |
| Bacteria | Microbulbifer yueqingensis | 1 |
| Bacteria | Methylobacterium phyllostachyos | 2 |
| Bacteria | Lactobacillus helveticus H9 | 1 |
| Bacteria | Labrenzia alexandrii | 1 |
| Bacteria | Burkholderia puraquae | 1 |
| Bacteria | Mycoplasma pulmonis UAB CTIP | 2 |
| Environmental samples | Roseburia inulinivorans CAG:15 | 1 |
| Bacteria | Comamonadaceae bacterium 32-67-11 | 1 |
| Bacteria | Streptococcus sp. F0441 | 1 |
| Bacteria | candidate division Zixibacteria bacterium 4484_95 | 2 |
| Invertebrates | Camponotus floridanus | 2 |
| Vertebrates | Zoarces viviparus | 1 |
| Bacteria | Tissierella creatinophila DSM 6911 | 2 |
| Bacteria | Escherichia sp. KTE114 | 2 |
| Bacteria | Paraburkholderia sp. PDC91 | 1 |
| Bacteria | Pseudomonas amygdali pv. aesculi | 2 |
| Bacteria | Methylobacterium mesophilicum SR1.6/6 | 1 |
| Bacteria | Neisseria arctica | 1 |
| Bacteria | Lentisphaerae bacterium RIFOXYA12_FULL_48_11 | 3 |
| Bacteria | bacterium I07 | 1 |
| Bacteria | Microbacterium sp. Gd 4-13 | 3 |
| Bacteria | Clostridium sp. DSM 4029 | 1 |
| Bacteria | Arthrobacter sp. Hiyo1 | 1 |
| Bacteria | Rhizobium sp. Root708 | 1 |
| Bacteria | Formivibrio citricus | 1 |
| Bacteria | Rhodospirillales bacterium 20-60-12 | 1 |
| Invertebrates | Acromyrmex echinatior | 2 |
| Bacteria | Streptomyces acidiscabies | 2 |
| Bacteria | Rhizobiales bacterium 63-7 | 1 |
| Bacteria | Gemmiger sp. An194 | 1 |
| Bacteria | Loktanella sp. DSM 29012 | 1 |
| Bacteria | Roseomonas deserti | 2 |
| Bacteria | Aquamicrobium sp. LC103 | 2 |
| Bacteria | Verrucomicrobia bacterium ADurb.Bin474 | 2 |
| Bacteria | Clostridium autoethanogenum | 2 |
| Bacteria | Providencia rettgeri | 3 |
| Bacteria | Bacillus sp. HMG | 2 |
| Bacteria | Actinobacteria bacterium OV320 | 1 |
| Bacteria | Sphingobium sp. | 1 |
| Bacteria | Agrococcus pavilionensis RW1 | 3 |
| Bacteria | Acetomicrobium mobile DSM 13181 | 1 |
| Bacteria | Emcibacter congregatus | 1 |
| Bacteria | Deltaproteobacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_51_20 | 1 |
| Bacteria | Aeromicrobium sp. Root495 | 1 |
| Bacteria | Brucella sp. NVSL 07-0026 | 1 |
| Bacteria | Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 | 2 |
| Bacteria | Halomonas boliviensis LC1 | 2 |
| Plants and Fungi | Blastocystis sp. ATCC 50177/Nand II | 2 |
| Bacteria | Corynebacterium renale | 2 |
| Invertebrates | Melipona quadrifasciata | 2 |
| Bacteria | Mycobacterium sp. VKM Ac-1817D | 1 |
| Bacteria | Comamonadaceae bacterium CG12_big_fil_rev_8_21_14_0_65_59_15 | 1 |
| Bacteria | Bacillus altitudinis | 1 |
| Bacteria | Clostridium saccharobutylicum | 2 |
| Bacteria | Novosphingobium sp. MD-1 | 1 |
| Bacteria | Sinorhizobium sp. NG07B | 1 |
| Bacteria | Nitrospirae bacterium RBG_16_64_22 | 1 |
| Bacteria | Roseovarius halotolerans | 1 |
| Bacteria | Alphaproteobacteria bacterium MarineAlpha3_Bin6 | 1 |
| Invertebrates | Opisthorchis viverrini | 3 |
| Bacteria | Microbacterium sp. XT11 | 2 |
| Bacteria | Candidatus Propionivibrio aalborgensis | 1 |
| Bacteria | Pseudobutyrivibrio sp. YE44 | 1 |
| Bacteria | Lactococcus fujiensis JCM 16395 | 3 |
| Bacteria | Cohaesibacter sp. ES.047 | 1 |
| Bacteria | Lysobacter spongiicola DSM 21749 | 1 |
| Bacteria | Aeromicrobium sp. Root472D3 | 1 |
| Bacteria | Pseudovibrio sp. JE062 | 1 |
| Bacteria | Brachyspira suanatina | 3 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.003.01.2.1 | 1 |
| Bacteria | Proteus sp. HMSC10D02 | 3 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.001.04.2.1 | 2 |
| Bacteria | Microbacterium testaceum StLB037 | 3 |
| Bacteria | Klebsiella pneumoniae subsp. pneumoniae DSM 30104 | 2 |
| Bacteria | Streptomyces dengpaensis | 1 |
| Bacteria | Streptomyces sp. yr375 | 1 |
| Bacteria | Omnitrophica bacterium RIFCSPLOWO2_01_FULL_45_10 | 1 |
| Bacteria | Cronobacter dublinensis 1210 | 1 |
| Bacteria | Stenotrophomonas sp. ZAC14D2_NAIMI4_6 | 1 |
| Bacteria | Propionibacterium freudenreichii | 1 |
| Bacteria | Candidatus Scalindua rubra | 1 |
| Invertebrates | Dufourea novaeangliae | 2 |
| Bacteria | Desulfopila aestuarii DSM 18488 | 1 |
| Bacteria | Paracoccus yeei | 3 |
| Bacteria | Pelagibacteraceae bacterium | 1 |
| Bacteria | Sphingomonadales bacterium 32-64-22 | 2 |
| Bacteria | Pasteurella bettyae CCUG 2042 | 2 |
| Bacteria | Streptomyces sp. RSD-27 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_52_10 | 1 |
| Bacteria | Staphylococcus devriesei | 1 |
| Bacteria | Pusillimonas sp. T7-7 | 1 |
| Invertebrates | Dictyocaulus viviparus | 2 |
| Bacteria | Vibrio mimicus | 2 |
| Bacteria | Rhodococcus tukisamuensis | 1 |
| Bacteria | Staphylococcus vitulinus | 1 |
| Bacteria | Janthinobacterium sp. BJB304 | 1 |
| Invertebrates | Melanaphis sacchari | 1 |
| Bacteria | Sphingomonas sp. SCN 67-18 | 1 |
| Bacteria | Streptomyces sp. AA4 | 1 |
| Bacteria | Limnohabitans sp. JirII-31 | 1 |
| Bacteria | Candidatus Gullanella endobia | 1 |
| Bacteria | Turicibacter sanguinis PC909 | 2 |
| Bacteria | Pigmentiphaga sp. IMT-318 | 1 |
| Bacteria | Dokdonella immobilis | 1 |
| Bacteria | Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 2 |
| Bacteria | Pseudomonas sp. J237 | 1 |
| Bacteria | Gordonia iterans | 2 |
| Bacteria | Shimia sp. SK013 | 1 |
| Invertebrates | Trachymyrmex septentrionalis | 2 |
| Bacteria | Caldalkalibacillus thermarum TA2.A1 | 1 |
| Bacteria | Polaromonas sp. 35-63-240 | 1 |
| Bacteria | Paenibacillus larvae subsp. larvae DSM 25719 | 5 |
| Bacteria | Mycobacterium sp. 852013-51886_SCH5428379 | 1 |
| Bacteria | Alicyclobacillus ferrooxydans | 1 |
| Bacteria | Sphingorhabdus wooponensis | 1 |
| Bacteria | Vibrio sp. vnigr-6D03 | 2 |
| Bacteria | Deinococcus phoenicis | 1 |
| Bacteria | Burkholderiales bacterium PBB1 | 1 |
| Bacteria | Pelobacter sp. SFB93 | 1 |
| Bacteria | Domibacillus aminovorans | 4 |
| Bacteria | Stackebrandtia nassauensis DSM 44728 | 1 |
| Bacteria | Tardiphaga sp. OV697 | 1 |
| Bacteria | Nocardia cyriacigeorgica | 1 |
| Bacteria | filamentous cyanobacterium CCP2 | 2 |
| Bacteria | Prosthecomicrobium hirschii | 1 |
| Bacteria | Clostridium sp. 7_3_54FAA | 1 |
| Bacteria | Desulfomicrobium norvegicum | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_64_10 | 2 |
| Bacteria | Rhizobium sp. IRBG74 | 1 |
| Bacteria | Paenibacillus ferrarius | 2 |
| Environmental samples | Roseburia sp. CAG:100 | 1 |
| Bacteria | Lactobacillus crispatus MV-3A-US | 2 |
| Bacteria | Shimia marina | 1 |
| Bacteria | Thermocrispum agreste | 1 |
| Bacteria | Pseudomonas sp. URMO17WK12:I5 | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED34 | 1 |
| Bacteria | Frigoribacterium sp. Leaf415 | 1 |
| Bacteria | Legionella massiliensis | 1 |
| Bacteria | Shewanella sediminis HAW-EB3 | 1 |
| Bacteria | Lactobacillus amylolyticus | 1 |
| Bacteria | Oceanospirillales bacterium TMED59 | 1 |
| Bacteria | Legionella longbeachae | 1 |
| Bacteria | Thermosporothrix hazakensis | 1 |
| Bacteria | Streptococcus australis | 3 |
| Bacteria | Cellvibrionales bacterium TMED49 | 1 |
| Bacteria | Candidatus Aquiluna sp. UB-MaderosW2red | 2 |
| Bacteria | Enterococcus faecalis ERV103 | 2 |
| Bacteria | Aeromonas diversa CDC 2478-85 | 2 |
| Bacteria | Vibrio sp. 10N.222.47.A9 | 1 |
| Bacteria | Parvibaculum sp. | 1 |
| Bacteria | Comamonas sp. JNW | 1 |
| Bacteria | Yersinia pseudotuberculosis IP 31758 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Newport str. S09097 | 2 |
| Bacteria | Macrococcus caseolyticus JCSC5402 | 1 |
| Bacteria | Leptonema illini DSM 21528 | 1 |
| Bacteria | Pseudorhizobium pelagicum | 1 |
| Bacteria | Streptococcus parasanguinis | 1 |
| Bacteria | Modestobacter sp. DSM 44400 | 1 |
| Bacteria | Flavimaricola marinus | 1 |
| Bacteria | Rhizobium sp. RU35A | 1 |
| Bacteria | Paracoccus denitrificans PD1222 | 1 |
| Bacteria | Acidiphilium sp. 20-67-58 | 1 |
| Bacteria | Streptococcus suis T15 | 1 |
| Bacteria | Tessaracoccus bendigoensis DSM 12906 | 1 |
| Bacteria | Vagococcus lutrae LBD1 | 3 |
| Bacteria | Shewanella canadensis | 1 |
| Bacteria | Rhizobium subbaraonis | 1 |
| Bacteria | Pontivivens insulae | 1 |
| Bacteria | Stanieria cyanosphaera PCC 7437 | 1 |
| Bacteria | Veillonella dispar ATCC 17748 | 1 |
| Bacteria | Planctomycetes bacterium RIFOXYD12_FULL_42_12 | 1 |
| Invertebrates | Spodoptera frugiperda | 1 |
| Bacteria | Mycolicibacterium fortuitum | 1 |
| Bacteria | Azospirillum sp. | 1 |
| Bacteria | Cellulomonas sp. Root930 | 1 |
| Bacteria | Bosea sp. Tri-49 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.AU.002.02.1.1 | 1 |
| Bacteria | Rhizobium phaseoli Brasil 5 | 1 |
| Bacteria | Bacillus flexus | 1 |
| Bacteria | Bauldia litoralis | 1 |
| Bacteria | Halomonas elongata | 2 |
| Bacteria | Halalkalicoccus jeotgali B3 | 1 |
| Bacteria | Vibrio alginolyticus 40B | 1 |
| Bacteria | Sanguibacter gelidistatuariae | 1 |
| Bacteria | Syntrophus aciditrophicus SB | 1 |
| Bacteria | Comamonas sp. E6 | 1 |
| Bacteria | Thioclava atlantica | 1 |
| Bacteria | Spiroplasma monobiae MQ-1 | 1 |
| Bacteria | Bermanella marisrubri | 1 |
| Bacteria | Syntrophobacterales bacterium GWC2_56_13 | 1 |
| Bacteria | Sphingomonas sp. Ag1 | 1 |
| Bacteria | Thauera sp. D20 | 1 |
| Invertebrates | Megaselia scalaris | 1 |
| Bacteria | Pantoea dispersa | 2 |
| Bacteria | Tenericutes bacterium 4572_104 | 1 |
| Bacteria | Lactobacillus amylovorus DSM 20531 | 1 |
| Bacteria | Pseudomonas sp. MWU13-2625 | 4 |
| Environmental samples | Coprococcus sp. CAG:782 | 1 |
| Bacteria | Arthrobacter sp. Hiyo4 | 1 |
| Bacteria | Frankia sp. NRRL B-16219 | 1 |
| Bacteria | Pseudodesulfovibrio profundus | 2 |
| Bacteria | Dermabacter vaginalis | 2 |
| Bacteria | Deltaproteobacteria bacterium RIFOXYD12_FULL_57_12 | 1 |
| Bacteria | Lactobacillus ruminis SPM0211 | 1 |
| Bacteria | Chlamydia felis Fe/C-56 | 1 |
| Bacteria | Caloranaerobacter azorensis DSM 13643 | 1 |
| Bacteria | Deinococcus hopiensis KR-140 | 1 |
| Bacteria | Elusimicrobia bacterium RIFCSPHIGHO2_01_FULL_64_10 | 1 |
| Bacteria | Sporomusa silvacetica DSM 10669 | 1 |
| Bacteria | Lachnospiraceae bacterium TF01-11 | 1 |
| Invertebrates | Bactrocera dorsalis | 1 |
| Bacteria | Alphaproteobacteria bacterium 64-11 | 1 |
| Bacteria | Mesorhizobium soli | 1 |
| Bacteria | Nitrosospira sp. Nl5 | 1 |
| Bacteria | Bacillus sp. 2_A_57_CT2 | 3 |
| Bacteria | Elusimicrobia bacterium RIFOXYD12_FULL_66_9 | 1 |
| Bacteria | Pseudarthrobacter equi | 1 |
| Bacteria | Deltaproteobacteria bacterium ADurb.Bin207 | 1 |
| Bacteria | Rhodobacteraceae bacterium BAR1 | 1 |
| Bacteria | Clostridium sp. AF20-7 | 1 |
| Bacteria | Actinomyces hordeovulneris | 1 |
| Bacteria | Akkermansia sp. | 1 |
| Bacteria | Photorhabdus heterorhabditis | 1 |
| Bacteria | Alphaproteobacteria bacterium ADurb.Bin100 | 1 |
| Bacteria | Laribacter hongkongensis HLHK9 | 1 |
| Primates | Lemur catta | 1 |
| Bacteria | Novosphingobium tardaugens NBRC 16725 | 1 |
| Bacteria | Macrococcus sp. IME1552 | 1 |
| Bacteria | Clostridium sp. TM06-18 | 1 |
| Bacteria | Alphaproteobacteria bacterium CG1_02_46_17 | 1 |
| Bacteria | Phycisphaerae bacterium SM23_33 | 2 |
| Bacteria | Novosphingobium sp. FSW06-99 | 1 |
| Bacteria | Actinomyces howellii | 1 |
| Bacteria | Azospirillum sp. L-25-5w-1 | 1 |
| Bacteria | Glaciecola nitratireducens FR1064 | 1 |
| Bacteria | Sphingomonas turrisvirgatae | 1 |
| Bacteria | Haloactinopolyspora alba | 1 |
| Bacteria | Rhodoferax sp. IMCC26218 | 1 |
| Bacteria | Sporomusa malonica | 1 |
| Bacteria | Methyloceanibacter caenitepidi | 1 |
| Bacteria | Bifidobacterium bifidum LMG 13195 | 1 |
| Bacteria | Cephaloticoccus primus | 1 |
| Bacteria | Sphingomonas sp. TF3 | 1 |
| Bacteria | Kushneria marisflavi | 2 |
| Bacteria | Cellulomonas sp. 73-92 | 1 |
| Bacteria | Rhizobacter gummiphilus | 1 |
| Bacteria | Thiohalospira halophila DSM 15071 | 1 |
| Environmental samples | Firmicutes bacterium CAG:341 | 1 |
| Bacteria | Pseudomonas sp. RW405 | 1 |
| Bacteria | Criblamydia sequanensis CRIB-18 | 2 |
| Bacteria | Clostridium sp. AF37-7 | 1 |
| Vertebrates | Balearica regulorum gibbericeps | 1 |
| Bacteria | Sphingomonas sp. ZDH117 | 1 |
| Bacteria | Faecalitalea cylindroides T2-87 | 1 |
| Bacteria | Chitinimonas sp. BJB300 | 2 |
| Bacteria | Glaesserella parasuis SW114 | 1 |
| Bacteria | Roseovarius sp. | 1 |
| Bacteria | Cupriavidus necator | 1 |
| Bacteria | Paracoccus tibetensis | 1 |
| Bacteria | Halothiobacillus sp. 20-54-6 | 1 |
| Bacteria | Sphingomonas sp. TPD3009 | 1 |
| Bacteria | Leifsonia sp. OV430 | 1 |
| Bacteria | Hyphomicrobium sulfonivorans | 1 |
| Bacteria | Alishewanella jeotgali KCTC 22429 | 1 |
| Bacteria | Sphingopyxis sp. LC363 | 1 |
| Bacteria | Treponema sp. OMZ 838 | 1 |
| Bacteria | Streptococcus sp. HMSC10A01 | 1 |
| Bacteria | Celeribacter ethanolicus | 1 |
| Bacteria | Clostridium sp. AM22-11AC | 1 |
| Bacteria | Pseudomonas benzenivorans | 1 |
| Bacteria | Puniceibacterium sediminis | 1 |
| Bacteria | Candidatus Latescibacteria bacterium ADurb.Bin168 | 2 |
| Bacteria | Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_FULL_65_16 | 1 |
| Bacteria | Pseudomonas coronafaciens pv. oryzae | 1 |
| Bacteria | Novosphingobium sp. B1 | 1 |
| Bacteria | Amycolatopsis methanolica 239 | 1 |
| Bacteria | Marivita cryptomonadis | 1 |
| Bacteria | Pasteurellales bacterium | 1 |
| Bacteria | Candidatus Sedimenticola endophacoides | 1 |
| Bacteria | Rodentibacter rarus | 1 |
| Bacteria | Pseudomonas resinovorans NBRC 106553 | 2 |
| Bacteria | Streptomyces sp. NRRL F-5122 | 1 |
| Bacteria | Neisseria mucosa ATCC 25996 | 1 |
| Vertebrates | Micrurus paraensis | 1 |
| Bacteria | Variovorax sp. JS1663 | 1 |
| Bacteria | Rhizobium sp. Leaf306 | 2 |
| Bacteria | Bacillus marmarensis DSM 21297 | 2 |
| Bacteria | Methylorubrum extorquens CM4 | 1 |
| Bacteria | Amycolatopsis sp. AA4 | 1 |
| Bacteria | Fusobacterium sp. oral taxon 370 str. F0437 | 1 |
| Bacteria | Xanthobacter tagetidis | 1 |
| Bacteria | Clostridium sp. ATCC 29733 | 1 |
| Bacteria | Rhodopseudomonas palustris | 1 |
| Bacteria | Burkholderia sp. Bp8963 | 1 |
| Bacteria | Sphingomonas sp. OV641 | 1 |
| Invertebrates | Panstrongylus megistus | 1 |
| Bacteria | Rathayibacter caricis DSM 15933 | 1 |
| Invertebrates | Capsaspora owczarzaki ATCC 30864 | 1 |
| Bacteria | Legionella israelensis | 1 |
| Bacteria | Thauera terpenica 58Eu | 1 |
| Bacteria | Alkalilimnicola ehrlichii MLHE-1 | 1 |
| Bacteria | Shewanella pealeana ATCC 700345 | 1 |
| Bacteria | Limnohabitans sp. 63ED37-2 | 1 |
| Environmental samples | Sutterella sp. CAG:521 | 1 |
| Bacteria | Salinarimonadaceae bacterium HL-109 | 1 |
| Bacteria | Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_70_10 | 1 |
| Bacteria | Fibrobacter succinogenes | 1 |
| Bacteria | Actinomyces slackii | 1 |
| Bacteria | Sphingobium japonicum UT26S | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.14.1.2 | 1 |
| Bacteria | Phyllobacterium salinisoli | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.09.1.1 | 1 |
| Bacteria | Mycoplasma pneumoniae | 2 |
| Bacteria | Clostridium tetanomorphum DSM 665 | 1 |
| Bacteria | Pseudomonas sp. BAY1663 | 1 |
| Bacteria | Clostridiales bacterium CHKCI006 | 1 |
| Bacteria | Sphingosinicella sp. GL-C-18 | 1 |
| Bacteria | Streptomyces sp. NBS 14/10 | 1 |
| Bacteria | Desulfobacterales bacterium C00003104 | 1 |
| Invertebrates | Corethrella appendiculata | 1 |
| Bacteria | Pseudomonas sp. S-6-2 | 1 |
| Bacteria | Brucella abortus S19 | 1 |
| Bacteria | Dermabacter sp. HSID17554 | 1 |
| Bacteria | Elusimicrobium sp. An273 | 1 |
| Bacteria | Variovorax sp. 679 | 1 |
| Bacteria | Cryobacterium flavum | 1 |
| Bacteria | Alphaproteobacteria bacterium PA2 | 1 |
| Bacteria | Xenorhabdus eapokensis | 1 |
| Invertebrates | Atta colombica | 2 |
| Bacteria | Maritimibacter sp. HL-12 | 1 |
| Bacteria | Caldicellulosiruptor saccharolyticus DSM 8903 | 1 |
| Bacteria | Pseudomonas alcaligenes OT 69 | 1 |
| Bacteria | Blastococcus sp. DSM 44272 | 1 |
| Bacteria | Methylocystis hirsuta | 1 |
| Bacteria | Roseburia sp. AF25-13LB | 1 |
| Bacteria | Hyphomicrobium nitrativorans NL23 | 1 |
| Bacteria | Thermoanaerobacterium saccharolyticum JW/SL-YS485 | 1 |
| Bacteria | Rhodobacteraceae bacterium WDS4C29 | 1 |
| Bacteria | Zavarzinia compransoris | 1 |
| Bacteria | Oceanospirillum sp. | 1 |
| Bacteria | Helicobacter sp. MIT 01-6242 | 1 |
| Bacteria | Ectothiorhodosinus mongolicus | 1 |
| Bacteria | Geodermatophilus sabuli | 1 |
| Bacteria | Maritimibacter sp. 55A14 | 1 |
| Bacteria | Vibrio sp. 10N.261.55.A7 | 2 |
| Bacteria | Thiomonas arsenitoxydans | 2 |
| Bacteria | Desulfotomaculum nigrificans CO-1-SRB | 1 |
| Bacteria | Clostridium sp. SY8519 | 1 |
| Bacteria | SAR92 bacterium BACL16 MAG-120619-bin48 | 1 |
| Bacteria | Roseivivax roseus | 1 |
| Bacteria | Catenulispora acidiphila DSM 44928 | 1 |
| Bacteria | Williamsia faeni | 1 |
| Bacteria | Limnohabitans sp. T6-5 | 1 |
| Bacteria | Lachnospira multipara | 1 |
| Bacteria | Ruminococcus lactaris CC59_002D | 1 |
| Bacteria | Marinovum algicola DG 898 | 1 |
| Bacteria | Pseudoalteromonas spongiae UST010723-006 | 1 |
| Bacteria | Sphingomonas sp. LM7 | 1 |
| Invertebrates | Anopheles epiroticus | 2 |
| Bacteria | Streptomyces fulvissimus DSM 40593 | 1 |
| Bacteria | Planktotalea frisia | 1 |
| Bacteria | Streptomyces sp. HPH0547 | 1 |
| Bacteria | Amphritea atlantica | 1 |
| Bacteria | Alphaproteobacteria bacterium GWF2_58_20 | 1 |
| Bacteria | Caldicellulosiruptor hydrothermalis 108 | 1 |
| Bacteria | Pseudoxanthomonas sp. CF125 | 1 |
| Bacteria | Caballeronia udeis | 1 |
| Bacteria | Candidatus Acetothermum autotrophicum | 1 |
| Bacteria | Omnitrophica bacterium RIFCSPLOWO2_01_FULL_45_10b | 1 |
| Bacteria | Roseburia sp. AF25-15LB | 1 |
| Bacteria | Fimbriiglobus ruber | 2 |
| Bacteria | Ferrovum sp. JA12 | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED243 | 1 |
| Bacteria | Cellvibrio sp. PSBB023 | 1 |
| Bacteria | Borrelia miyamotoi FR64b | 1 |
| Bacteria | Mycoplasma sp. HU2014 | 1 |
| Bacteria | Weissella confusa | 1 |
| Bacteria | Thioalkalivibrio sp. K90mix | 1 |
| Bacteria | Paracoccus aminophilus JCM 7686 | 1 |
| Bacteria | Propionivibrio dicarboxylicus | 1 |
| Bacteria | Eisenbergiella massiliensis | 1 |
| Bacteria | Rhizobium sp. AAP43 | 1 |
| Bacteria | Haloferax sp. SB29 | 1 |
| Bacteria | marine gamma proteobacterium HTCC2143 | 1 |
| Bacteria | Roseivivax pacificus | 1 |
| Bacteria | Xanthomonadales bacterium 63-13 | 1 |
| Bacteria | Pandoraea vervacti | 1 |
| Bacteria | Mycolicibacterium chubuense | 1 |
| Bacteria | Roseovarius tolerans | 1 |
| Bacteria | Aeromonas cavernicola | 2 |
| Bacteria | Mitsuokella sp. oral taxon 131 str. W9106 | 9 |
| Bacteria | Microbacterium sp. T32 | 1 |
| Bacteria | Thermoanaerobacter italicus Ab9 | 6 |
| Bacteria | Arthrobacter sp. MWB30 | 3 |
| Bacteria | Methylobacterium nodulans ORS 2060 | 2 |
| Bacteria | Enterococcus faecalis ERV65 | 2 |
| Bacteria | Enterococcus haemoperoxidus ATCC BAA-382 | 7 |
| Bacteria | Bacillus sp. JCM 19046 | 6 |
| Bacteria | Listeria kieliensis | 11 |
| Bacteria | Janthinobacterium agaricidamnosum | 1 |
| Bacteria | Mesorhizobium loti | 4 |
| Bacteria | Cutibacterium acnes | 7 |
| Bacteria | Tistrella sp. | 1 |
| Bacteria | Streptomyces formicae | 3 |
| Bacteria | Marispirochaeta aestuarii | 10 |
| Bacteria | Enterococcus faecalis CH188 | 5 |
| Bacteria | Chelonobacter oris | 6 |
| Bacteria | Anaerotignum lactatifermentans | 1 |
| Bacteria | Staphylococcus nepalensis | 9 |
| Bacteria | Romboutsia hominis | 3 |
| Bacteria | Erysipelatoclostridium ramosum DSM 1402 | 14 |
| Bacteria | Ornatilinea apprima | 6 |
| Bacteria | Streptobacillus moniliformis | 11 |
| Invertebrates | Panstrongylus lignarius | 2 |
| Bacteria | Suttonella indologenes | 3 |
| Bacteria | Geobacter uraniireducens Rf4 | 2 |
| Bacteria | Citreicella sp. SE45 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Montevideo str. 42N | 6 |
| Bacteria | Clostridium sp. FS41 | 13 |
| Bacteria | Streptomyces rimosus subsp. rimosus | 4 |
| Bacteria | Ralstonia pseudosolanacearum | 2 |
| Bacteria | Pelagicola sp. LXJ1103 | 1 |
| Vertebrates | Anas platyrhynchos platyrhynchos | 27 |
| Bacteria | Hoyosella subflava DQS3-9A1 | 1 |
| Bacteria | Limnohabitans sp. B9-3 | 1 |
| Bacteria | Loktanella sp. 22II-4b | 1 |
| Bacteria | Gulosibacter molinativorax | 4 |
| Bacteria | Pirellula staleyi DSM 6068 | 2 |
| Bacteria | Pseudonocardia sp. Ae717_Ps2 | 1 |
| Bacteria | Geobacillus thermodenitrificans | 1 |
| Bacteria | Megasphaera sp. MJR8396C | 5 |
| Bacteria | Bordetella ansorpii | 3 |
| Bacteria | Streptococcus thermophilus CNCM I-1630 | 1 |
| Bacteria | Planctomycetes bacterium RBG_19FT_COMBO_48_8 | 2 |
| Bacteria | Streptomyces mobaraensis NBRC 13819 = DSM 40847 | 2 |
| Vertebrates | Taeniopygia guttata | 10 |
| Bacteria | Kocuria rosea | 3 |
| Bacteria | Aeromonas encheleia | 7 |
| Bacteria | Streptococcus pseudopneumoniae | 2 |
| Bacteria | Lautropia mirabilis ATCC 51599 | 2 |
| Bacteria | Vagococcus martis | 2 |
| Bacteria | Proteobacteria bacterium SG_bin9 | 1 |
| Bacteria | [Clostridium] hiranonis DSM 13275 | 13 |
| Bacteria | Streptococcus agalactiae | 13 |
| Bacteria | Candidatus Cloacimonetes bacterium 4572_55 | 1 |
| Invertebrates | Anopheles maculatus | 4 |
| Bacteria | Mycoplasma iowae DK-CPA | 2 |
| Bacteria | Enterococcus faecium | 66 |
| Bacteria | [Clostridium] innocuum | 105 |
| Bacteria | Phaeospirillum fulvum MGU-K5 | 1 |
| Bacteria | Rodentibacter heylii | 7 |
| Bacteria | Thalassobium sp. | 3 |
| Bacteria | Paracoccus sp. Arc7-R13 | 1 |
| Bacteria | Lactobacillus kimchiensis | 8 |
| Bacteria | Lentisphaerae bacterium GWF2_49_21 | 4 |
| Bacteria | Candidatus Omnitrophica bacterium 4484_213 | 2 |
| Invertebrates | Bursaphelenchus xylophilus | 7 |
| Bacteria | Magnetovibrio blakemorei | 1 |
| Bacteria | Erysipelotrichaceae bacterium | 12 |
| Invertebrates | Echinostoma caproni | 5 |
| Bacteria | Pseudomonas alcaligenes | 1 |
| Bacteria | Planctomyces sp. SH-PL14 | 4 |
| Mammals | Monodelphis domestica | 9 |
| Bacteria | Salmonella enterica subsp. arizonae | 15 |
| Bacteria | Corynebacterium accolens ATCC 49726 | 2 |
| Bacteria | Streptococcus gordonii | 1 |
| Bacteria | Zetaproteobacteria bacterium | 3 |
| Bacteria | Rahnella sp. Y9602 | 1 |
| Vertebrates | Meleagris gallopavo | 9 |
| Vertebrates | Cynoglossus semilaevis | 34 |
| Bacteria | Pectobacterium atrosepticum SCRI1043 | 6 |
| Bacteria | Lactococcus sp. 1JSPR-7 | 7 |
| Bacteria | Ramlibacter tataouinensis TTB310 | 1 |
| Bacteria | Fusobacterium ulcerans 12-1B | 1 |
| Bacteria | Jannaschia aquimarina | 1 |
| Bacteria | Lactobacillus cacaonum DSM 21116 | 6 |
| Bacteria | Brachybacterium phenoliresistens | 4 |
| Bacteria | Burkholderia cepacia GG4 | 1 |
| Bacteria | Lactobacillus paracasei subsp. tolerans DSM 20258 | 2 |
| Mammals | Eschrichtius robustus | 3 |
| Bacteria | Pectobacterium wasabiae CFBP 3304 | 1 |
| Bacteria | Fibrobacter sp. UWT3 | 1 |
| Bacteria | Novosphingobium sp. PP1Y | 2 |
| Bacteria | Nocardioides sp. | 3 |
| Bacteria | Bacillus sp. SG-1 | 2 |
| Bacteria | Cupriavidus necator N-1 | 1 |
| Bacteria | Clostridium intestinale URNW | 23 |
| Bacteria | Dinoroseobacter shibae DFL 12 = DSM 16493 | 1 |
| Environmental samples | marine sediment metagenome | 73 |
| Bacteria | Omnitrophica bacterium OLB16 | 3 |
| Bacteria | Treponema brennaborense DSM 12168 | 5 |
| Invertebrates | Ooceraea biroi | 3 |
| Bacteria | Arthrobacter sp. 7749 | 2 |
| Bacteria | Acidithiobacillus ferrooxidans | 2 |
| Bacteria | Cardiobacteriales bacterium | 2 |
| Bacteria | Halalkalibacillus sp. B3227 | 1 |
| Bacteria | Escherichia coli K-12 | 12 |
| Bacteria | Mesorhizobium temperatum | 1 |
| Bacteria | Aeribacillus pallidus | 11 |
| Bacteria | Varibaculum cambriense | 1 |
| Bacteria | Clostridiales bacterium COT073_COT-073 | 9 |
| Bacteria | Pseudomonas putida | 15 |
| Bacteria | Idiomarinaceae bacterium | 2 |
| Bacteria | Parvularcula sp. SM1705 | 1 |
| Bacteria | Bartonella bacilliformis KC583 | 1 |
| Bacteria | Tatumella morbirosei | 6 |
| Bacteria | Treponema maltophilum ATCC 51939 | 3 |
| Bacteria | Lentisphaerae bacterium RIFOXYC12_FULL_60_16 | 5 |
| Bacteria | Spirochaetales bacterium | 6 |
| Vertebrates | Oryzias latipes | 116 |
| Primates | Otolemur garnettii | 10 |
| Bacteria | Escherichia coli 908525 | 4 |
| Bacteria | Brevibacillus laterosporus | 2 |
| Bacteria | Lactobacillus helveticus DPC 4571 | 1 |
| Bacteria | Domibacillus enclensis | 9 |
| Bacteria | Reinekea forsetii | 3 |
| Bacteria | Escherichia coli 4.0967 | 6 |
| Bacteria | Clostridioides difficile F501 | 4 |
| Bacteria | Aquimixticola soesokkakensis | 1 |
| Bacteria | Streptomyces sp. NRRL F-5755 | 1 |
| Bacteria | bacterium (Candidatus Stahlbacteria) CG23_combo_of_CG06-09_8_20_14_all_40_9 | 4 |
| Bacteria | Clostridium ljungdahlii | 2 |
| Vertebrates | Oryzias melastigma | 33 |
| Bacteria | Ruegeria litorea R37 | 1 |
| Bacteria | Bifidobacterium breve MCC 1454 | 2 |
| Bacteria | Pseudospirillum japonicum | 1 |
| Bacteria | Alkalibacterium thalassium | 2 |
| Bacteria | Enterococcus faecium CRL1879 | 7 |
| Bacteria | Ignavibacteriales bacterium | 4 |
| Bacteria | Acinetobacter sp. WC-141 | 2 |
| Bacteria | Pseudomonas sp. GW456-E7 | 6 |
| Bacteria | Tardiphaga sp. CF115 | 1 |
| Invertebrates | Gongylonema pulchrum | 4 |
| Bacteria | Clostridium amylolyticum | 9 |
| Invertebrates | Loa loa | 8 |
| Bacteria | Bifidobacterium asteroides PRL2011 | 2 |
| Bacteria | Staphylococcus massiliensis S46 | 1 |
| Bacteria | Candidatus Accumulibacter sp. BA-91 | 1 |
| Bacteria | Leuconostoc mesenteroides subsp. mesenteroides | 1 |
| Bacteria | Staphylococcus epidermidis ATCC 12228 | 3 |
| Bacteria | Vibrio variabilis | 11 |
| Bacteria | Gammaproteobacteria bacterium TMED119 | 1 |
| Bacteria | Sphingomonas jatrophae | 1 |
| Bacteria | Candidatus Omnitrophica bacterium 4484_171 | 2 |
| Bacteria | Corynebacterium striatum | 3 |
| Bacteria | Alicyclobacillus hesperidum URH17-3-68 | 3 |
| Bacteria | Rhodobacterales bacterium | 3 |
| Bacteria | Actinobacteria bacterium YIM 96077 | 3 |
| Bacteria | Clostridium sp. AWRP | 2 |
| Bacteria | Candidatus Marinimicrobia bacterium | 10 |
| Bacteria | Erysipelotrichaceae bacterium AF15-26LB | 24 |
| Bacteria | Epulopiscium sp. AS2M-Bin002 | 5 |
| Vertebrates | Columba livia | 13 |
| Bacteria | [Clostridium] spiroforme | 4 |
| Bacteria | Pseudomonas sp. UW4 | 1 |
| Bacteria | Enterobacter sp. FY-07 | 2 |
| Bacteria | Mangrovibacter sp. MFB070 | 8 |
| Bacteria | Dielma fastidiosa | 30 |
| Bacteria | Clostridiaceae bacterium JG1575 | 2 |
| Bacteria | Halieaceae bacterium | 7 |
| Bacteria | Paraburkholderia sp. DHOA04 | 1 |
| Bacteria | Granulicatella sp. | 2 |
| Bacteria | Vibrio sp. HENC-03 | 3 |
| Bacteria | Clostridium sp. C105KSO14 | 10 |
| Bacteria | Clostridiaceae bacterium AM27-36LB | 4 |
| Vertebrates | Maylandia zebra | 34 |
| Bacteria | Pseudoalteromonas luteoviolacea B = ATCC 29581 | 1 |
| Bacteria | Sedimentisphaera cyanobacteriorum | 3 |
| Bacteria | Vibrio agarivorans | 2 |
| Bacteria | Hahella chejuensis KCTC 2396 | 1 |
| Bacteria | Fusobacterium gonidiaformans 3-1-5R | 1 |
| Bacteria | Pseudomonas sp. RW410 | 2 |
| Bacteria | Bifidobacterium subtile | 5 |
| Bacteria | Arthrobacter alpinus | 8 |
| Bacteria | Salimicrobium jeotgali | 3 |
| Bacteria | Chromobacterium sp. LK11 | 3 |
| Bacteria | Leifsonia sp. ALI-44-B | 4 |
| Bacteria | Escherichia coli H386 | 9 |
| Bacteria | Gallibacterium genomosp. 3 | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Javiana | 4 |
| Bacteria | Clostridium baratii str. Sullivan | 6 |
| Bacteria | Xenorhabdus nematophila str. Websteri | 1 |
| Bacteria | Rhizobium sp. Root1212 | 1 |
| Bacteria | Yersinia ruckeri | 5 |
| Bacteria | Bacilli bacterium VT-13-104 | 3 |
| Bacteria | Idiomarinaceae bacterium HL-53 | 1 |
| Vertebrates | Micrurus corallinus | 4 |
| Bacteria | Erysipelotrichaceae bacterium 6_1_45 | 34 |
| Bacteria | Paenibacillus sp. Root52 | 2 |
| Bacteria | Spirochaetes bacterium GWB1_27_13 | 7 |
| Bacteria | Pseudomonas cichorii | 1 |
| Bacteria | Coprobacillus cateniformis | 18 |
| Bacteria | Fictibacillus macauensis ZFHKF-1 | 2 |
| Bacteria | Cryobacterium sp. NEAU-85 | 3 |
| Bacteria | Escherichia coli 536 | 9 |
| Bacteria | Streptococcus agalactiae LMG 14747 | 8 |
| Bacteria | Aerococcus sp. HMSC10H05 | 6 |
| Bacteria | Lactobacillus ruminis ATCC 25644 | 1 |
| Bacteria | Rhodospirillales bacterium 20-64-7 | 1 |
| Bacteria | Escherichia coli ISC7 | 5 |
| Bacteria | Lactobacillus casei subsp. casei ATCC 393 | 7 |
| Bacteria | Vibrio maritimus | 19 |
| Bacteria | Clavibacter michiganensis subsp. nebraskensis | 1 |
| Bacteria | Sphingopyxis granuli | 2 |
| Bacteria | Acinetobacter sp. RIT592 | 8 |
| Bacteria | cyanobacterium TDX16 | 4 |
| Bacteria | Clostridium sp. HMSC19B10 | 5 |
| Bacteria | Enterococcus cecorum DSM 20682 = ATCC 43198 | 5 |
| Bacteria | Corynebacterium simulans | 1 |
| Bacteria | Photobacterium swingsii | 5 |
| Bacteria | Escherichia coli UMEA 3212-1 | 6 |
| Bacteria | Citrobacter amalonaticus | 13 |
| Bacteria | Fibrobacter sp. UWEL | 2 |
| Bacteria | Enterococcus raffinosus | 27 |
| Bacteria | Enterococcus faecalis EnGen0302 | 6 |
| Vertebrates | Nothobranchius kuhntae | 8 |
| Bacteria | Lactobacillus paracasei subsp. paracasei Lpp225 | 7 |
| Bacteria | Lactobacillus rennini DSM 20253 | 12 |
| Bacteria | Chromobacterium violaceum ATCC 12472 | 4 |
| Bacteria | Cutibacterium acnes KPA171202 | 7 |
| Bacteria | Sphingomonas sp. Leaf9 | 1 |
| Bacteria | Enterococcus sp. 12F9_DIV0723 | 11 |
| Bacteria | Salmonella enterica subsp. enterica serovar Java | 6 |
| Bacteria | Rhodovulum sp. ES.010 | 1 |
| Invertebrates | Drosophila simulans | 31 |
| Bacteria | Pseudogulbenkiania sp. NH8B | 2 |
| Bacteria | Bacillus subtilis BEST7613 | 5 |
| Bacteria | Proteobacteria bacterium TMED61 | 1 |
| Bacteria | Vibrio metschnikovii CIP 69.14 | 6 |
| Bacteria | Nocardioides dokdonensis FR1436 | 2 |
| Bacteria | Melioribacter sp. GWF2_38_21 | 3 |
| Bacteria | Erysipelatoclostridium ramosum | 12 |
| Bacteria | Thiobacillus sp. 65-1059 | 1 |
| Bacteria | Lactobacillus salivarius DSM 20555 = ATCC 11741 | 2 |
| Bacteria | Lactobacillus sp. FI11369 | 5 |
| Bacteria | Aureimonas ureilytica | 4 |
| Bacteria | Paenibacillus darwinianus | 3 |
| Bacteria | Oceanispirochaeta sp. M1 | 12 |
| Bacteria | Clostridium sp. AF17-2 | 1 |
| Bacteria | Veillonella rodentium | 2 |
| Bacteria | Stenotrophomonas sp. SAU14A_NAIMI4_5 | 1 |
| Bacteria | Photorhabdus luminescens | 3 |
| Bacteria | Coprobacillus sp. 8_2_54BFAA | 8 |
| Bacteria | Ewingella americana ATCC 33852 | 7 |
| Vertebrates | Pundamilia nyererei | 24 |
| Bacteria | Oceanotoga teriensis | 12 |
| Bacteria | Jeotgalibacillus malaysiensis | 4 |
| Bacteria | Salmonella enterica subsp. enterica serovar 4,[5],12:i:- | 11 |
| Bacteria | Massilia namucuonensis | 1 |
| Bacteria | Erwinia iniecta | 4 |
| Bacteria | Clostridium sp. C8 | 9 |
| Bacteria | Spirochaetia bacterium | 8 |
| Bacteria | Gracilimonas sp. 8A47 | 2 |
| Bacteria | Pelolinea submarina | 18 |
| Bacteria | Enterococcus faecalis DAPTO 512 | 9 |
| Bacteria | Borrelia turicatae 91E135 | 2 |
| Bacteria | Fusobacterium mortiferum ATCC 9817 | 17 |
| Bacteria | Bermanella sp. 47_1433_sub80_T6 | 1 |
| Bacteria | Deltaproteobacteria bacterium | 35 |
| Bacteria | Acinetobacter marinus | 2 |
| Bacteria | Desulfococcus multivorans DSM 2059 | 4 |
| Environmental samples | Succinatimonas sp. CAG:777 | 3 |
| Bacteria | Desulfotomaculum hydrothermale Lam5 = DSM 18033 | 1 |
| Bacteria | Corynebacterium oculi | 2 |
| Bacteria | candidate division WOR-3 bacterium JGI_Cruoil_03_51_56 | 4 |
| Bacteria | Corynebacterium sp. KPL1821 | 3 |
| Bacteria | Streptomyces regalis | 1 |
| Invertebrates | Zootermopsis nevadensis | 3 |
| Bacteria | Paenibacillus rigui | 2 |
| Bacteria | Phascolarctobacterium succinatutens YIT 12067 | 1 |
| Bacteria | Weissella paramesenteroides ATCC 33313 | 2 |
| Bacteria | Lactobacillus oligofermentans DSM 15707 = LMG 22743 | 3 |
| Bacteria | Proteobacteria bacterium SG_bin6 | 2 |
| Bacteria | Neorhizobium sp. SOG26 | 1 |
| Bacteria | Lachnospiraceae bacterium C7 | 2 |
| Bacteria | Citreicella sp. | 1 |
| Bacteria | Ensifer adhaerens | 1 |
| Bacteria | Anaerostipes hadrus | 60 |
| Bacteria | Caldanaerobacter subterraneus subsp. tengcongensis MB4 | 7 |
| Vertebrates | Neolamprologus brichardi | 24 |
| Bacteria | Salinispora arenicola CNS-205 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhi | 7 |
| Bacteria | Streptococcus pneumoniae SP14-BS69 | 5 |
| Bacteria | Streptococcus pseudopneumoniae 5247 | 1 |
| Bacteria | Serratia marcescens | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Cubana str. 76814 | 5 |
| Bacteria | Pseudomonas sp. ERMR1:02 | 2 |
| Bacteria | Spartobacteria bacterium AMD-G5 | 1 |
| Bacteria | Streptococcus pasteurianus ATCC 43144 | 11 |
| Vertebrates | Gasterosteus aculeatus | 23 |
| Bacteria | Selenomonas sp. oral taxon 138 str. F0429 | 4 |
| Vertebrates | Colinus virginianus | 11 |
| Bacteria | Cellulomonas marina | 2 |
| Bacteria | bacterium HR36 | 2 |
| Bacteria | Lactobacillus sp. | 6 |
| Bacteria | Microbacterium sp. Root61 | 4 |
| Invertebrates | Cherax destructor | 1 |
| Bacteria | Paenibacillus peoriae | 3 |
| Bacteria | Yersinia pestis Nepal516 | 5 |
| Bacteria | Rhodococcus sp. EPR-157 | 1 |
| Bacteria | Candidatus Thioglobus sp. | 1 |
| Bacteria | Enterococcus faecalis EnGen0359 | 8 |
| Bacteria | Lachnospiraceae bacterium AM26-1LB | 6 |
| Bacteria | Chlorobium phaeobacteroides DSM 266 | 1 |
| Bacteria | Psychromonas sp. B3M02 | 5 |
| Bacteria | Candidatus Kryptonium thompsoni | 1 |
| Bacteria | Paenibacillus sp. A59 | 1 |
| Bacteria | Caulobacterales bacterium 32-69-10 | 1 |
| Bacteria | Desulfobacter postgatei 2ac9 | 2 |
| Bacteria | Elusimicrobia bacterium RIFOXYA2_FULL_40_6 | 1 |
| Bacteria | Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 | 9 |
| Bacteria | Shewanella frigidimarina NCIMB 400 | 1 |
| Bacteria | Actinomyces tangfeifanii | 1 |
| Environmental samples | Alistipes finegoldii CAG:68 | 1 |
| Bacteria | Bacillus sp. AG236 | 1 |
| Bacteria | Bacillus thuringiensis | 5 |
| Bacteria | Candidatus Cloacimonetes bacterium ADurb.Bin117 | 2 |
| Bacteria | Klebsiella pneumoniae IS46 | 6 |
| Bacteria | Dermabacter sp. HMSC08H10 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RBG_13_44_8b | 2 |
| Bacteria | Neisseria meningitidis H44/76 | 1 |
| Bacteria | Marinilactibacillus piezotolerans | 5 |
| Invertebrates | Trachymyrmex zeteki | 2 |
| Bacteria | Corynebacterium durum F0235 | 3 |
| Bacteria | Deltaproteobacteria bacterium ADurb.Bin072 | 1 |
| Bacteria | Desulfobacterales bacterium S5133MH16 | 3 |
| Bacteria | Candiadtus Scalindua japonica | 1 |
| Bacteria | Epulopiscium sp. SCG-B11WGA-EpuloA1 | 11 |
| Bacteria | Lactococcus sp. | 4 |
| Bacteria | Paenibacillus sp. P3E | 4 |
| Bacteria | Lactococcus piscium | 5 |
| Bacteria | OM182 bacterium BACL3 MAG-120619-bin3 | 1 |
| Bacteria | Pseudomonas viridiflava | 1 |
| Bacteria | Ketobacter alkanivorans | 1 |
| Bacteria | Clostridium thermobutyricum DSM 4928 | 4 |
| Bacteria | Vibrio tasmaniensis | 2 |
| Bacteria | Corynebacterium stationis | 2 |
| Bacteria | Natrinema sp. CBA1119 | 1 |
| Bacteria | Planctomycetes bacterium RBG_13_46_10 | 2 |
| Bacteria | Atopobium vaginae PB189-T1-4 | 3 |
| Bacteria | Planctomycetes bacterium GWA2_39_15 | 1 |
| Bacteria | Selenomonas sp. F0473 | 2 |
| Bacteria | Alistipes sp. HGB5 | 1 |
| Bacteria | Enterococcus gilvus | 4 |
| Bacteria | Acidobacteria bacterium 37-71-11 | 4 |
| Bacteria | Shigella flexneri K-227 | 3 |
| Bacteria | Microbispora sp. GKU 823 | 1 |
| Bacteria | Nitrosomonas aestuarii | 1 |
| Bacteria | Lactobacillus kisonensis DSM 19906 = JCM 15041 | 4 |
| Bacteria | Syntrophaceae bacterium | 1 |
| Bacteria | Streptomyces varsoviensis | 1 |
| Bacteria | Vibrio neptunius | 3 |
| Bacteria | Pseudorhodoferax sp. Leaf267 | 2 |
| Bacteria | Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Panama | 4 |
| Bacteria | Mariprofundus aestuarium | 1 |
| Invertebrates | Apostichopus japonicus | 6 |
| Bacteria | Orenia metallireducens | 13 |
| Bacteria | Rhodobacter capsulatus Y262 | 2 |
| Bacteria | Lactobacillus agilis | 6 |
| Bacteria | Escherichia coli 1.2264 | 3 |
| Bacteria | Microbacterium ginsengiterrae | 3 |
| Bacteria | Candidatus Muproteobacteria bacterium RBG_16_62_13 | 1 |
| Bacteria | Sphingomonas sp. Leaf16 | 1 |
| Bacteria | Vibrio anguillarum | 7 |
| Bacteria | Halomonas sp. YLB-10 | 2 |
| Bacteria | Acidobacteria bacterium 21-70-11 | 1 |
| Bacteria | Microbacterium ginsengisoli | 3 |
| Bacteria | Escherichia coli ISC11 | 8 |
| Bacteria | Staphylococcus aureus subsp. aureus NCTC 8325 | 9 |
| Bacteria | Salmonella enterica subsp. enterica serovar Tennessee | 3 |
| Bacteria | Enterococcus sp. 12C11_DIV0727 | 4 |
| Bacteria | Shigella sp. | 2 |
| Bacteria | Bombiscardovia coagulans | 2 |
| Bacteria | Arthrobacter livingstonensis | 3 |
| Bacteria | Lactobacillus plantarum subsp. plantarum | 4 |
| Bacteria | Anaerolineae bacterium SM23_84 | 4 |
| Bacteria | Gemmatimonadetes bacterium 13_1_40CM_70_11 | 1 |
| Bacteria | Brachyspira hampsonii | 3 |
| Bacteria | Yersinia pestis biovar Orientalis str. IP275 | 4 |
| Bacteria | Proteus sp. | 1 |
| Invertebrates | Caenorhabditis japonica | 6 |
| Bacteria | Duganella sp. CF402 | 1 |
| Bacteria | Lachnoclostridium sp. An169 | 1 |
| Bacteria | Ruminococcus albus SY3 | 1 |
| Bacteria | Syntrophobacteraceae bacterium CG07_land_8_20_14_0_80_61_8 | 1 |
| Bacteria | Arthrobacter glacialis | 3 |
| Bacteria | Martelella sp. AD-3 | 2 |
| Bacteria | Lactobacillus sp. ESL0262 | 1 |
| Bacteria | Streptococcus australis ATCC 700641 | 1 |
| Bacteria | Streptococcus intermedius | 4 |
| Invertebrates | Ancylostoma ceylanicum | 11 |
| Bacteria | bacterium F16 | 2 |
| Bacteria | Planctomycetes bacterium TMED75 | 3 |
| Bacteria | Ruminococcus sp. OM05-10BH | 1 |
| Bacteria | Streptococcus sp. I-P16 | 5 |
| Bacteria | Escherichia coli O111:H11 str. CVM9455 | 4 |
| Bacteria | Treponema denticola US-Trep | 1 |
| Bacteria | Ketogulonicigenium vulgare WSH-001 | 1 |
| Bacteria | Pseudomonas syringae pv. spinaceae | 2 |
| Bacteria | Lentisphaerae bacterium GWF2_57_35 | 6 |
| Bacteria | Staphylococcus aureus subsp. aureus COL | 6 |
| Bacteria | Alphaproteobacteria bacterium RBG_16_64_48 | 1 |
| Bacteria | Escherichia coli BL21(DE3) | 6 |
| Bacteria | Kiritimatiellaceae bacterium TMED266 | 1 |
| Bacteria | Burkholderia pseudomallei 1710b | 1 |
| Bacteria | Pseudomonas sp. NFACC02 | 1 |
| Bacteria | Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21 | 1 |
| Bacteria | Sporosarcina pasteurii | 1 |
| Bacteria | Lachnospiraceae bacterium 28-4 | 2 |
| Bacteria | Rhodobacteraceae bacterium SB2 | 1 |
| Bacteria | Geobacteraceae bacterium GWC2_58_44 | 1 |
| Bacteria | Methylorubrum extorquens DM4 | 1 |
| Bacteria | Pseudokineococcus lusitanus | 1 |
| Bacteria | Mannheimia varigena USDA-ARS-USMARC-1296 | 4 |
| Bacteria | Escherichia coli CFT073 | 5 |
| Bacteria | Streptococcus dysgalactiae subsp. equisimilis | 3 |
| Bacteria | Verrucomicrobia bacterium 13_1_40CM_4_54_4 | 1 |
| Bacteria | Lachnospiraceae bacterium OM02-26 | 8 |
| Bacteria | Aeromonas sp. ASNIH4 | 8 |
| Bacteria | Betaproteobacteria bacterium SG8_40 | 1 |
| Bacteria | Saccharibacillus sp. O16 | 3 |
| Bacteria | Vibrio ponticus | 14 |
| Bacteria | Fontibacillus phaseoli | 1 |
| Bacteria | Mycobacterium sp. Root135 | 1 |
| Bacteria | [Bacillus] sp. KCTC 13219 | 3 |
| Bacteria | Vagococcus penaei | 3 |
| Bacteria | Corynebacterium provencense | 1 |
| Bacteria | Bacillus stratosphericus | 1 |
| Bacteria | candidate division TA06 bacterium SM23_40 | 4 |
| Bacteria | Gammaproteobacteria bacterium 39-13 | 1 |
| Bacteria | Rhodopseudomonas palustris CGA009 | 2 |
| Bacteria | Lactobacillus tucceti DSM 20183 | 6 |
| Bacteria | Moraxella cuniculi DSM 21768 | 1 |
| Bacteria | Sphingomonas wittichii DC-6 | 1 |
| Bacteria | Moellerella wisconsensis | 3 |
| Bacteria | Planctomycetes bacterium ADurb.Bin069 | 7 |
| Bacteria | Polynucleobacter sp. 35-46-207 | 1 |
| Bacteria | Leifsonia sp. Leaf264 | 3 |
| Bacteria | Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 | 1 |
| Bacteria | Bartonella quintana JK 73 | 2 |
| Bacteria | Lactobacillus crispatus 125-2-CHN | 2 |
| Bacteria | Pseudomonas sp. StFLB209 | 3 |
| Bacteria | Gemella bergeri ATCC 700627 | 3 |
| Bacteria | Betaproteobacteria bacterium GR16-43 | 1 |
| Bacteria | candidate division Zixibacteria bacterium RBG_16_50_21 | 2 |
| Bacteria | Aliiroseovarius crassostreae | 1 |
| Invertebrates | Schistosoma mansoni | 5 |
| Bacteria | Thiobacillus denitrificans ATCC 25259 | 1 |
| Bacteria | Epibacterium mobile F1926 | 1 |
| Bacteria | Thalassobacillus cyri | 4 |
| Bacteria | Brucella abortus NCTC 8038 | 1 |
| Bacteria | Frederiksenia canicola | 3 |
| Bacteria | Frischella perrara | 6 |
| Bacteria | Corynebacterium lactis RW2-5 | 2 |
| Bacteria | Sphingorhabdus flavimaris | 1 |
| Bacteria | Yersinia pseudotuberculosis IP 32953 | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Eastbourne | 6 |
| Bacteria | Actinomyces massiliensis F0489 | 1 |
| Bacteria | Sphingobium sp. SCN 64-10 | 1 |
| Bacteria | Pararhodobacter sp. CIC4N-9 | 1 |
| Bacteria | Devosia sp. H5989 | 1 |
| Bacteria | Streptomyces badius | 1 |
| Bacteria | Olsenella scatoligenes | 4 |
| Bacteria | Defluviimonas alba | 1 |
| Bacteria | Bacillus smithii | 6 |
| Bacteria | Shinella sp. DD12 | 1 |
| Bacteria | Listeria innocua Clip11262 | 5 |
| Bacteria | Methylophilaceae bacterium | 1 |
| Bacteria | Rheinheimera sp. F8 | 1 |
| Bacteria | Hydrogenophaga sp. H7 | 1 |
| Bacteria | Actinoplanes sp. N902-109 | 1 |
| Bacteria | Escherichia coli M605 | 2 |
| Bacteria | Thioflexothrix psekupsii | 1 |
| Bacteria | Streptomyces alfalfae | 2 |
| Bacteria | Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_59_12 | 2 |
| Bacteria | Asticcacaulis taihuensis | 1 |
| Bacteria | Streptomyces griseoflavus | 3 |
| Bacteria | Microbacterium trichothecenolyticum | 3 |
| Bacteria | Selenomonas flueggei ATCC 43531 | 6 |
| Bacteria | Aurantimonas manganoxydans SI85-9A1 | 1 |
| Bacteria | Mycobacterium sp. YC-RL4 | 2 |
| Bacteria | Enterococcus moraviensis ATCC BAA-383 | 10 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_54_11 | 2 |
| Bacteria | Streptococcus merionis | 16 |
| Bacteria | Bifidobacterium psychraerophilum | 2 |
| Plants and Fungi | Cyanidioschyzon merolae strain 10D | 2 |
| Bacteria | Gemmatimonadetes bacterium GWC2_71_9 | 2 |
| Bacteria | Paenibacillus sp. Aloe-11 | 7 |
| Bacteria | Omnitrophica WOR_2 bacterium GWB2_45_9 | 1 |
| Bacteria | Bacillus sp. AFS088145 | 1 |
| Bacteria | Bacillus deserti | 6 |
| Environmental samples | Clostridium sp. CAG:253 | 1 |
| Bacteria | Escherichia coli E1114 | 6 |
| Bacteria | Glaciihabitans tibetensis | 5 |
| Bacteria | Clostridiales bacterium TF09-2AC | 2 |
| Bacteria | Spiroplasma helicoides | 4 |
| Bacteria | Alteribacillus bidgolensis | 7 |
| Bacteria | Sphingomonas indica | 1 |
| Bacteria | Idiomarina baltica | 1 |
| Bacteria | Mycoplasma synoviae 53 | 2 |
| Bacteria | Microbacterium sp. H83 | 2 |
| Bacteria | Clostridiaceae bacterium AF31-3BH | 7 |
| Bacteria | Halomonas sp. es.049 | 2 |
| Invertebrates | Schistosoma curassoni | 4 |
| Bacteria | Shewanella piezotolerans WP3 | 1 |
| Bacteria | Sedimentibacter sp. SX930 | 2 |
| Bacteria | Roseburia sp. AF25-18LB | 1 |
| Mammals | Oryctolagus cuniculus | 14 |
| Bacteria | Paenibacillus elgii | 2 |
| Bacteria | Streptomyces sp. PVA 94-07 | 2 |
| Bacteria | Lactobacillus sp. CBA3606 | 8 |
| Bacteria | Methylophaga sulfidovorans | 1 |
| Bacteria | Corynebacterium doosanense CAU 212 = DSM 45436 | 1 |
| Bacteria | Escherichia coli DEC1C | 4 |
| Environmental samples | Clostridium nexile CAG:348 | 1 |
| Bacteria | Paenibacillus sp. TCA20 | 3 |
| Bacteria | candidate division Zixibacteria bacterium 4484_93 | 3 |
| Bacteria | Edwardsiella tarda ATCC 23685 | 3 |
| Bacteria | Staphylococcus caprae M23864:W1 | 2 |
| Bacteria | Carboxydocella sporoproducens DSM 16521 | 1 |
| Bacteria | Candidatus Endolissoclinum sp. TMED26 | 1 |
| Bacteria | Lactobacillus nagelii DSM 13675 | 10 |
| Bacteria | Buchnera aphidicola str. APS (Acyrthosiphon pisum) | 1 |
| Bacteria | Jeongeupia sp. USM3 | 3 |
| Bacteria | Candidatus Glassbacteria bacterium RIFCSPLOWO2_12_FULL_58_11 | 3 |
| Bacteria | Propionibacterium sp. KPL2009 | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Enteritidis | 6 |
| Bacteria | Escherichia coli 908519 | 4 |
| Bacteria | Marinicaulis flavus | 1 |
| Environmental samples | Coprobacillus sp. CAG:235 | 3 |
| Bacteria | Salinivibrio sp. YCSC6 | 1 |
| Bacteria | Streptomyces sp. Tue6028 | 1 |
| Bacteria | Paracoccus aminovorans | 2 |
| Bacteria | Buttiauxella noackiae ATCC 51607 | 3 |
| Bacteria | Listeria fleischmannii subsp. fleischmannii | 14 |
| Bacteria | Rhodothermus marinus DSM 4252 | 3 |
| Bacteria | Pseudoflavonifractor sp. An85 | 6 |
| Bacteria | Elusimicrobia bacterium RIFOXYA2_FULL_53_38 | 2 |
| Bacteria | Lactobacillus pentosus KCA1 | 1 |
| Bacteria | Megasphaera elsdenii DSM 20460 | 3 |
| Bacteria | Pseudomonas sp. 21C1 | 2 |
| Bacteria | Streptomyces olivochromogenes | 1 |
| Bacteria | Kingella potus | 1 |
| Bacteria | Yersiniaceae bacterium 2015Iso6 | 5 |
| Bacteria | Lysinibacillus sphaericus | 2 |
| Environmental samples | Roseburia sp. CAG:50 | 2 |
| Bacteria | Budvicia aquatica | 6 |
| Bacteria | Ignavibacteria bacterium RIFOXYB2_FULL_37_11 | 2 |
| Bacteria | Propionibacterium acidifaciens | 3 |
| Bacteria | Saccharibacillus sp. O23 | 2 |
| Bacteria | Deltaproteobacteria bacterium SG8_13 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.004.02.1.1 | 1 |
| Bacteria | Tersicoccus phoenicis | 4 |
| Bacteria | Anaerobium acetethylicum | 2 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12 | 1 |
| Bacteria | gamma proteobacterium IMCC2047 | 1 |
| Bacteria | Gallionellales bacterium CG_4_9_14_0_8_um_filter_55_61 | 1 |
| Bacteria | Candidatus Riflebacteria bacterium GWC2_50_8 | 3 |
| Bacteria | Omnitrophica WOR_2 bacterium GWA2_47_8 | 3 |
| Bacteria | Anaerocolumna xylanovorans DSM 12503 | 9 |
| Bacteria | Clostridium ventriculi | 5 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_68_15 | 1 |
| Bacteria | Paenibacillaceae bacterium GAS479 | 2 |
| Invertebrates | Diaphorina citri | 4 |
| Bacteria | Ruminiclostridium cellobioparum subsp. termitidis CT1112 | 2 |
| Bacteria | Spirochaetaceae bacterium | 5 |
| Bacteria | Rathayibacter sp. PhB93 | 4 |
| Bacteria | Oleispira antarctica RB-8 | 1 |
| Bacteria | Aeromonas sp. L_1B5_3 | 4 |
| Bacteria | Vibrio splendidus 12B01 | 1 |
| Bacteria | Clostridioides difficile CD160 | 6 |
| Bacteria | Lactobacillus paracasei subsp. paracasei Lpp126 | 6 |
| Bacteria | Streptomyces griseoviridis | 2 |
| Bacteria | Rheinheimera sp. SA_1 | 1 |
| Bacteria | Legionella birminghamensis | 1 |
| Bacteria | Hydromonas sp. F02 | 1 |
| Bacteria | Clostridium botulinum C str. Eklund | 1 |
| Bacteria | Moraxellaceae bacterium | 2 |
| Bacteria | [Flavobacterium] thermophilum | 1 |
| Bacteria | bacterium BMS3Bbin14 | 1 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 | 1 |
| Bacteria | [Clostridium] citroniae WAL-19142 | 9 |
| Bacteria | Pseudomonas monteilii | 3 |
| Bacteria | Curvibacter putative symbiont of Hydra magnipapillata | 1 |
| Bacteria | Arenimonas metalli CF5-1 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.001.02.1.1 | 2 |
| Bacteria | Herbaspirillum sp. CF444 | 1 |
| Bacteria | Vibrio casei | 5 |
| Bacteria | Bacillus sp. SGD-V-76 | 4 |
| Bacteria | Rhodospirillales bacterium URHD0017 | 1 |
| Bacteria | Gilliamella sp. A7 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Holcomb | 4 |
| Bacteria | Gemmatimonadetes bacterium 13_1_40CM_4_65_7 | 1 |
| Bacteria | Clostridium cellulovorans 743B | 3 |
| Bacteria | Halothiobacillus neapolitanus c2 | 1 |
| Bacteria | Mycolicibacterium parafortuitum | 3 |
| Bacteria | Candidatus Coatesbacteria bacterium 4484_99 | 1 |
| Bacteria | Clostridium sp. Maddingley MBC34-26 | 6 |
| Bacteria | Candidatus Terasakiella magnetica | 1 |
| Bacteria | Cellulomonas sp. 73-145 | 2 |
| Bacteria | Borrelia recurrentis A1 | 1 |
| Bacteria | Gallionellales bacterium CG_4_8_14_3_um_filter_54_18 | 1 |
| Bacteria | Marinosulfonomonas sp. | 2 |
| Bacteria | Methylosinus trichosporium OB3b | 1 |
| Bacteria | Flavobacteriales bacterium | 1 |
| Bacteria | Clostridium sp. AF32-12BH | 1 |
| Bacteria | Bacillus sp. FJAT-26390 | 3 |
| Bacteria | [Ruminococcus] torques | 7 |
| Bacteria | Streptomyces sp. GKU 895 | 1 |
| Bacteria | Bacillus sp. FJAT-27986 | 2 |
| Bacteria | Spirochaetes bacterium ADurb.Bin133 | 5 |
| Bacteria | Pantoea vagans C9-1 | 6 |
| Bacteria | Pseudomonas sp. JY-Q | 1 |
| Bacteria | Photobacterium iliopiscarium | 4 |
| Bacteria | Staphylococcus aureus subsp. aureus MRSA252 | 1 |
| Bacteria | Treponema pallidum subsp. pallidum SS14 | 2 |
| Bacteria | Streptomyces sp. PsTaAH-137 | 1 |
| Bacteria | Neochlamydia sp. TUME1 | 2 |
| Bacteria | Chlamydia trachomatis D/UW-3/CX | 2 |
| Bacteria | Thauera sp. 28 | 1 |
| Bacteria | Halomonas venusta | 2 |
| Bacteria | Paraburkholderia rhizoxinica HKI 454 | 1 |
| Bacteria | Jiangella sp. DSM 45060 | 1 |
| Bacteria | Flavobacteriaceae bacterium TMED147 | 1 |
| Bacteria | Candidatus Wallbacteria bacterium GWC2_49_35 | 2 |
| Bacteria | Curtobacterium sp. MCBA15_008 | 2 |
| Bacteria | Shewanella sp. ALD9 | 1 |
| Bacteria | Spirochaeta lutea | 6 |
| Bacteria | Aerococcus sp. HMSC062B07 | 6 |
| Bacteria | Halovibrio sp. YL5-2 | 1 |
| Bacteria | Pelodictyon phaeoclathratiforme BU-1 | 1 |
| Bacteria | Cellvibrionales bacterium TMED47 | 1 |
| Bacteria | Rhodobacteraceae bacterium PD-2 | 2 |
| Bacteria | candidate division WOR_3 bacterium SM1_77 | 2 |
| Bacteria | Pseudarthrobacter siccitolerans | 3 |
| Bacteria | Streptomyces sp. WAC07061 | 1 |
| Bacteria | Alphaproteobacteria bacterium BRH_c36 | 1 |
| Invertebrates | Ancylostoma duodenale | 3 |
| Bacteria | Floricoccus tropicus | 4 |
| Bacteria | Caulobacter vibrioides OR37 | 1 |
| Bacteria | Rhodosalinus sp. E84 | 1 |
| Bacteria | Kordiimonas lacus | 1 |
| Bacteria | Lactobacillus equi DSM 15833 = JCM 10991 | 6 |
| Bacteria | Methylocystis sp. SC2 | 1 |
| Bacteria | Amycolatopsis sp. GLM-1 | 2 |
| Bacteria | Bacillus horikoshii | 2 |
| Bacteria | Salinibacterium xinjiangense | 2 |
| Bacteria | Microbacterium sp. RURRCA19A | 3 |
| Bacteria | Caldanaerobacter subterraneus subsp. yonseiensis KB-1 | 4 |
| Bacteria | Mesorhizobium sp. SOD10 | 2 |
| Bacteria | Desulfovibrio alaskensis G20 | 1 |
| Bacteria | Eubacterium ramulus | 3 |
| Bacteria | Pseudomonas syringae pv. tomato str. DC3000 | 3 |
| Bacteria | Silicibacter sp. TrichCH4B | 1 |
| Bacteria | Aquabacterium sp. SJQ9 | 1 |
| Bacteria | Actinobacteria bacterium OK006 | 1 |
| Bacteria | Rhodobacterales bacterium TMED271 | 1 |
| Bacteria | Marinomonas pollencensis | 1 |
| Bacteria | Fibrobacter sp. UWS3 | 1 |
| Bacteria | Halogranum salarium B-1 | 1 |
| Bacteria | Gammaproteobacteria bacterium RBG_16_57_12 | 1 |
| Vertebrates | Charadrius vociferus | 6 |
| Bacteria | Mariniphaga anaerophila | 1 |
| Bacteria | Desulfacinum infernum DSM 9756 | 3 |
| Bacteria | Streptomyces yokosukanensis | 2 |
| Bacteria | Shewanella algae | 1 |
| Bacteria | Escherichia coli 53638 | 5 |
| Bacteria | Pseudonocardia sp. Ae706_Ps2 | 1 |
| Bacteria | Actinomyces sp. CtC 72 | 4 |
| Bacteria | Tepidicaulis marinus | 1 |
| Bacteria | Eilatimonas milleporae | 1 |
| Bacteria | Burkholderia sp. YI23 | 2 |
| Bacteria | Lactobacillus fabifermentans DSM 21115 | 2 |
| Bacteria | Verrucomicrobiaceae bacterium TMED137 | 1 |
| Bacteria | Listeria innocua ATCC 33091 | 1 |
| Bacteria | Halomonas sp. KO116 | 1 |
| Bacteria | Maliponia aquimaris | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_44_16 | 1 |
| Bacteria | Oenococcus oeni PSU-1 | 4 |
| Bacteria | Legionella hackeliae | 1 |
| Bacteria | Deltaproteobacteria bacterium 13_1_40CM_4_68_19 | 3 |
| Invertebrates | Clunio marinus | 6 |
| Bacteria | Candidatus Brocadia sinica | 3 |
| Bacteria | Rhizobium sp. PDC82 | 1 |
| Bacteria | Geobacillus genomosp. 3 | 2 |
| Bacteria | Granulibacter bethesdensis CGDNIH1 | 1 |
| Bacteria | Oribacterium sp. KHPX15 | 2 |
| Bacteria | bacterium BMS3Abin11 | 1 |
| Bacteria | Exiguobacterium sp. AB2 | 3 |
| Bacteria | Melaminivora sp. SC2-9 | 1 |
| Bacteria | Novosphingobium sp. FSY-9 | 1 |
| Invertebrates | Schistosoma margrebowiei | 3 |
| Bacteria | Opitutus sp. GAS368 | 3 |
| Bacteria | Afipia clevelandensis ATCC 49720 | 1 |
| Vertebrates | Acanthisitta chloris | 2 |
| Bacteria | Mycoplasma iowae 695 | 3 |
| Bacteria | Alysiella crassa | 1 |
| Bacteria | Dietzia sp. UCD-THP | 1 |
| Bacteria | Burkholderia metallica | 1 |
| Bacteria | Sphingopyxis bauzanensis | 1 |
| Bacteria | Kosakonia sp. S29 | 1 |
| Bacteria | Afipia sp. Root123D2 | 2 |
| Bacteria | Paenibacillus sp. 7516 | 3 |
| Bacteria | Massilia timonae CCUG 45783 | 1 |
| Bacteria | Thiothrix caldifontis | 1 |
| Bacteria | Neisseria flavescens NRL30031/H210 | 1 |
| Bacteria | Candidatus Jettenia caeni | 3 |
| Bacteria | Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 | 2 |
| Bacteria | Candidatus Omnitrophica bacterium CG_4_8_14_3_um_filter_43_15 | 1 |
| Bacteria | Thiocapsa marina 5811 | 2 |
| Bacteria | Deltaproteobacteria bacterium GWC2_42_11 | 1 |
| Bacteria | Azospirillum sp. B2 | 1 |
| Environmental samples | uncultured Alphaproteobacteria bacterium | 1 |
| Bacteria | Polynucleobacter duraquae | 1 |
| Bacteria | Rhodobacterales bacterium 56_14_T64 | 1 |
| Bacteria | Marinomonas sp. YLB-05 | 1 |
| Bacteria | Streptomyces sp. WM6386 | 2 |
| Bacteria | Lachnospiraceae bacterium 5_1_57FAA | 2 |
| Bacteria | Moraxella porci DSM 25326 | 1 |
| Bacteria | Thalassotalea agarivorans | 1 |
| Bacteria | Azoarcus communis SWub3 = DSM 12120 | 2 |
| Bacteria | Acinetobacter soli NIPH 2899 | 2 |
| Bacteria | Variovorax sp. PAMC 28711 | 1 |
| Bacteria | Serratia sp. 3ACOL1 | 3 |
| Bacteria | Marininema mesophilum | 2 |
| Bacteria | Halomonas xianhensis | 2 |
| Bacteria | Candidatus Omnitrophica bacterium CG1_02_41_171 | 2 |
| Bacteria | Corticibacter populi | 1 |
| Bacteria | Marinobacter santoriniensis NKSG1 | 1 |
| Bacteria | Pseudomonas luteola | 1 |
| Bacteria | Sphingomonas sp. Leaf412 | 1 |
| Bacteria | Leptospira perolatii | 1 |
| Bacteria | Halomonas sp. PBN3 | 2 |
| Bacteria | Enterobacter cloacae S611 | 4 |
| Bacteria | Halomonas muralis | 2 |
| Bacteria | Candidatus Desantisbacteria bacterium CG_4_9_14_3_um_filter_40_11 | 1 |
| Bacteria | Mycoplasma testudineum | 1 |
| Bacteria | Thiorhodospira sibirica ATCC 700588 | 1 |
| Bacteria | Diaphorobacter polyhydroxybutyrativorans | 1 |
| Bacteria | Pontimonas salivibrio | 1 |
| Bacteria | Leptolyngbya sp. NIES-2104 | 1 |
| Invertebrates | Blattella germanica | 5 |
| Bacteria | Brucella abortus bv. 1 str. 9-941 | 1 |
| Bacteria | Treponema vincentii ATCC 35580 | 1 |
| Bacteria | Agrobacterium sp. MS2 | 1 |
| Bacteria | Klebsiella michiganensis KCTC 1686 | 3 |
| Bacteria | bacterium ADurb.Bin243 | 2 |
| Bacteria | Cutibacterium acnes HL110PA4 | 3 |
| Bacteria | Roseobacter sp. GAI101 | 1 |
| Bacteria | Hydrogenophaga sp. A37 | 2 |
| Bacteria | Lacunisphaera limnophila | 2 |
| Bacteria | Clostridium puniceum | 8 |
| Bacteria | Halomonas salina | 2 |
| Bacteria | Streptomyces luteus | 1 |
| Bacteria | Streptococcus sp. HSISM1 | 2 |
| Bacteria | Butyrivibrio proteoclasticus B316 | 1 |
| Bacteria | Halomonas ilicicola DSM 19980 | 2 |
| Bacteria | Rhodospirillales bacterium 70-18 | 1 |
| Bacteria | Staphylococcus saprophyticus subsp. saprophyticus | 1 |
| Bacteria | Xanthobacter sp. 35-67-6 | 1 |
| Bacteria | Bifidobacteriaceae bacterium NR016 | 1 |
| Bacteria | Haemophilus sp. CCUG 66565 | 1 |
| Bacteria | Devosia sp. DBB001 | 1 |
| Bacteria | Exiguobacterium sp. AT1b | 4 |
| Bacteria | Escherichia coli KTE146 | 3 |
| Bacteria | Akkermansia muciniphila | 2 |
| Bacteria | Pseudovibrio denitrificans | 1 |
| Bacteria | Photobacterium galatheae | 1 |
| Bacteria | Hymenobacter sp. unc380mfsha3.1 | 1 |
| Invertebrates | Zeugodacus cucurbitae | 1 |
| Bacteria | Gammaproteobacteria bacterium SG8_15 | 1 |
| Bacteria | Bacillus sp. v-76 | 3 |
| Bacteria | Streptomyces albireticuli | 3 |
| Bacteria | Limnohabitans sp. 103DPR2 | 1 |
| Bacteria | Bacillus methanolicus MGA3 | 6 |
| Bacteria | Spirochaetes bacterium GWB1_59_5 | 6 |
| Bacteria | Enterococcus faecalis ERV73 | 2 |
| Bacteria | Escherichia coli B185 | 4 |
| Bacteria | Comamonas sp. BIGb0124 | 3 |
| Environmental samples | Eubacterium sp. CAG:192 | 2 |
| Bacteria | Dickeya aquatica | 1 |
| Bacteria | Tatumella ptyseos | 2 |
| Bacteria | Oligotropha carboxidovorans OM5 | 2 |
| Bacteria | Anoxybacillus flavithermus AK1 | 4 |
| Bacteria | Massilia glaciei | 1 |
| Bacteria | Fibrobacter sp. UWP2 | 1 |
| Bacteria | Arthrobacter sp. U41 | 3 |
| Bacteria | Streptomyces cyaneogriseus subsp. noncyanogenus | 1 |
| Bacteria | Bacillus sp. M6-12 | 1 |
| Bacteria | Rathayibacter sp. Leaf296 | 4 |
| Bacteria | Desulfobacterales bacterium C00003106 | 1 |
| Bacteria | Ramlibacter sp. Leaf400 | 1 |
| Bacteria | Methylobacterium currus | 2 |
| Bacteria | Streptomyces alboflavus | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Daytona | 6 |
| Bacteria | Halarchaeum acidiphilum MH1-52-1 | 1 |
| Bacteria | Corynebacterium singulare | 1 |
| Bacteria | Desulfobacterales bacterium CG23_combo_of_CG06-09_8_20_14_all_51_8 | 2 |
| Bacteria | Haloarcula sp. Atlit-47R | 1 |
| Bacteria | Rhizobium tibeticum | 2 |
| Bacteria | Candidatus Aminicenantes bacterium | 1 |
| Bacteria | bacterium 1xD8-6 | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.001.04.1.1 | 2 |
| Bacteria | Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 | 1 |
| Bacteria | Gordonia aichiensis NBRC 108223 | 1 |
| Bacteria | Ignavibacteria bacterium CG1_02_37_35 | 3 |
| Bacteria | Oenococcus oeni ATCC BAA-1163 | 1 |
| Bacteria | bacterium HR20 | 1 |
| Bacteria | Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 | 1 |
| Bacteria | Citrobacter youngae ATCC 29220 | 1 |
| Bacteria | Vibrio cholerae O1 biovar El Tor | 1 |
| Bacteria | Alphaproteobacteria bacterium 64-6 | 2 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_19FT_COMBO_59_29 | 1 |
| Bacteria | Agrobacterium fabrum str. J-07 | 1 |
| Bacteria | Hyalangium minutum | 3 |
| Bacteria | Caenispirillum salinarum AK4 | 1 |
| Bacteria | Massilia sp. Leaf139 | 1 |
| Bacteria | Bacillus sp. YR288 | 1 |
| Environmental samples | Eubacterium siraeum CAG:80 | 1 |
| Bacteria | Bifidobacterium pseudocatenulatum | 1 |
| Bacteria | Photobacterium halotolerans | 3 |
| Bacteria | Rhizobium album | 2 |
| Bacteria | Helicobacter cholecystus | 1 |
| Bacteria | Actinoplanes friuliensis DSM 7358 | 1 |
| Bacteria | Sphingobium ummariense RL-3 | 1 |
| Bacteria | Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11 | 1 |
| Bacteria | Leuconostoc gelidum subsp. gasicomitatum | 2 |
| Bacteria | Leuconostoc citreum KM20 | 1 |
| Bacteria | Chthoniobacter flavus Ellin428 | 3 |
| Bacteria | Rhodoferax antarcticus ANT.BR | 1 |
| Bacteria | Leuconostoc pseudomesenteroides PS12 | 1 |
| Bacteria | Clostridium sp. AF15-17LB | 4 |
| Bacteria | Bacillus sp. AFS023182 | 1 |
| Bacteria | Microbacteriaceae bacterium MWH-Ta3 | 1 |
| Bacteria | Rhizobiales bacterium GAS188 | 1 |
| Bacteria | Citromicrobium sp. | 1 |
| Bacteria | Labrenzia sp. OB1 | 1 |
| Bacteria | Gilliamella apicola SCGC AB-598-B02 | 1 |
| Bacteria | Acidimicrobiaceae bacterium TMED210 | 1 |
| Bacteria | Comamonadaceae bacterium CG17_big_fil_post_rev_8_21_14_2_50_60_13 | 1 |
| Bacteria | Ruegeria marina | 1 |
| Bacteria | Leuconostoc lactis | 1 |
| Bacteria | Streptomyces sp. 136MFCol5.1 | 1 |
| Bacteria | Rhodococcus rhodochrous ATCC 21198 | 1 |
| Bacteria | Ruminococcus sp. AF18-22 | 3 |
| Bacteria | Acidovorax sp. RAC01 | 1 |
| Bacteria | Pseudomonas syringae pv. maculicola | 1 |
| Bacteria | Fusobacteriia bacterium 4572_74 | 4 |
| Bacteria | Gardnerella vaginalis 409-05 | 1 |
| Bacteria | Prosthecochloris aestuarii DSM 271 | 1 |
| Bacteria | Bacillus cereus BDRD-Cer4 | 1 |
| Bacteria | Verrucomicrobia bacterium 13_1_20CM_3_54_17 | 1 |
| Bacteria | Rhizobiales bacterium 65-9 | 1 |
| Bacteria | Rhizobium sp. 58 | 1 |
| Bacteria | Methylibium petroleiphilum PM1 | 1 |
| Bacteria | Massilia sp. BSC265 | 1 |
| Bacteria | Parvibium lacunae | 1 |
| Bacteria | Firmicutes bacterium GWF2_51_9 | 9 |
| Bacteria | Azospirillum sp. CFH 70021 | 3 |
| Bacteria | Novosphingobium nitrogenifigens DSM 19370 | 2 |
| Environmental samples | Azospirillum sp. CAG:260 | 1 |
| Bacteria | Streptomyces lincolnensis | 2 |
| Bacteria | Pantoea sp. JKS000250 | 2 |
| Bacteria | Streptomyces sp. Ru72 | 1 |
| Bacteria | Borrelia anserina BA2 | 2 |
| Bacteria | Vibrio tubiashii ATCC 19109 | 7 |
| Bacteria | Halomonas saccharevitans | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Infantis str. SARB27 | 4 |
| Bacteria | Streptacidiphilus pinicola | 1 |
| Bacteria | Proteus mirabilis | 3 |
| Bacteria | Sagittula stellata E-37 | 1 |
| Bacteria | Rhodococcus sp. OK269 | 1 |
| Bacteria | Frigoribacterium sp. Leaf254 | 1 |
| Bacteria | Helicobacter brantae | 1 |
| Bacteria | Pseudoalteromonas sp. BSi20652 | 1 |
| Bacteria | Pectobacterium carotovorum subsp. brasiliense | 1 |
| Bacteria | Rhodovulum sp. P5 | 1 |
| Bacteria | Mesorhizobium oceanicum | 2 |
| Bacteria | Mesorhizobium sp. L48C026A00 | 2 |
| Bacteria | Propionicimonas paludicola | 2 |
| Bacteria | Burkholderia sp. CCGE1001 | 1 |
| Bacteria | Lactobacillus camelliae DSM 22697 = JCM 13995 | 4 |
| Bacteria | Drancourtella sp. An177 | 1 |
| Invertebrates | Globodera pallida | 4 |
| Bacteria | Sterolibacterium denitrificans | 1 |
| Bacteria | Corynebacterium sp. CCUG 69366 | 1 |
| Bacteria | Streptococcus vestibularis F0396 | 2 |
| Environmental samples | Megasphaera elsdenii CAG:570 | 1 |
| Bacteria | Altererythrobacter sp. B11 | 2 |
| Bacteria | Streptomyces sp. 3214.6 | 1 |
| Bacteria | Eggerthia catenaformis OT 569 = DSM 20559 | 1 |
| Bacteria | Verrucomicrobia bacterium Tous-C9LFEB | 1 |
| Bacteria | Sphingomonadales bacterium BRH_c3 | 1 |
| Bacteria | Pseudochrobactrum asaccharolyticum | 2 |
| Bacteria | Streptococcus infantis SK1302 | 1 |
| Bacteria | Desertifilum sp. IPPAS B-1220 | 1 |
| Bacteria | Geobacillus sp. 44B | 1 |
| Environmental samples | Blautia sp. CAG:37 | 1 |
| Bacteria | Xenorhabdus cabanillasii | 2 |
| Bacteria | Cohaesibacter marisflavi | 2 |
| Bacteria | Neisseria sp. oral taxon 014 str. F0314 | 1 |
| Bacteria | Neisseria meningitidis NM2795 | 1 |
| Bacteria | Moritella sp. Urea-trap-13 | 1 |
| Bacteria | Methylophaga sp. | 2 |
| Bacteria | Methylibium sp. T29-B | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.AU.002.04.1.1 | 1 |
| Bacteria | Thauera linaloolentis 47Lol = DSM 12138 | 1 |
| Bacteria | Thermodesulfatator autotrophicus | 1 |
| Bacteria | Ferrimonas sediminum | 1 |
| Bacteria | Streptococcus sp. | 3 |
| Bacteria | Streptomyces sp. WAC05374 | 1 |
| Invertebrates | Oesophagostomum dentatum | 2 |
| Bacteria | Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 | 1 |
| Bacteria | Desulfosporosinus sp. | 1 |
| Bacteria | Hungatella hathewayi DSM 13479 | 3 |
| Bacteria | Micromonospora globispora | 1 |
| Bacteria | Geobacillus sp. PA-3 | 3 |
| Bacteria | Marinobacter sp. F01 | 1 |
| Bacteria | Proteobacteria bacterium 228 | 2 |
| Bacteria | Clostridium sp. TF06-15AC | 1 |
| Bacteria | Desulfobacca acetoxidans DSM 11109 | 2 |
| Bacteria | Opitutaceae bacterium BACL24 MAG-120322-bin51 | 2 |
| Bacteria | Bacillus pumilus | 2 |
| Bacteria | Mycoplasma canis | 1 |
| Bacteria | Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5 | 1 |
| Bacteria | Noviherbaspirillum denitrificans | 1 |
| Bacteria | Streptomyces nodosus | 1 |
| Bacteria | Kaistia algarum | 1 |
| Bacteria | Cronobacter turicensis z3032 | 3 |
| Bacteria | Salinicoccus qingdaonensis | 1 |
| Bacteria | Halomonas shengliensis | 2 |
| Bacteria | Megasphaera cerevisiae DSM 20462 | 1 |
| Bacteria | Bosea sp. Root381 | 2 |
| Bacteria | Bacillus thuringiensis serovar darmstadiensis | 1 |
| Bacteria | Comamonas aquatica DA1877 | 1 |
| Bacteria | Legionella spiritensis | 1 |
| Bacteria | Xenorhabdus poinarii G6 | 1 |
| Bacteria | Fictibacillus phosphorivorans | 2 |
| Bacteria | Roseibaca ekhonensis | 1 |
| Bacteria | Pelobacter propionicus DSM 2379 | 1 |
| Bacteria | Propionibacterium sp. KPL1852 | 1 |
| Bacteria | Labrenzia aggregata IAM 12614 | 1 |
| Bacteria | Glaesserella parasuis | 1 |
| Bacteria | Pseudomonas oryzihabitans | 2 |
| Bacteria | Ruminococcaceae bacterium P7 | 1 |
| Bacteria | Thioclava dalianensis | 1 |
| Bacteria | Kocuria sp. HSID17590 | 2 |
| Bacteria | Plantibacter flavus | 1 |
| Bacteria | Sphingomonadales bacterium RIFCSPLOWO2_12_FULL_63_15 | 1 |
| Bacteria | Proteobacteria bacterium SG_bin8 | 1 |
| Bacteria | Chlorobaculum limnaeum | 1 |
| Bacteria | Actinoplanes derwentensis | 1 |
| Bacteria | Syntrophaceae bacterium CG2_30_58_14 | 1 |
| Bacteria | Bosea sp. PAMC 26642 | 1 |
| Bacteria | Pseudomonas zeshuii | 2 |
| Bacteria | Escherichia coli TW10509 | 1 |
| Bacteria | Mycobacterium sp. JS623 | 1 |
| Bacteria | Paracoccus seriniphilus | 1 |
| Bacteria | Candidatus Symbiobacter mobilis CR | 1 |
| Bacteria | Puniceicoccaceae bacterium MED-G31 | 1 |
| Bacteria | Neisseria sicca | 1 |
| Bacteria | Streptococcus sinensis | 1 |
| Bacteria | Nonomuraea jiangxiensis | 1 |
| Bacteria | Pseudaestuariivita atlantica | 1 |
| Bacteria | Leptospira borgpetersenii serovar Ballum | 1 |
| Bacteria | Devosia sp. YR412 | 1 |
| Bacteria | Paracoccus contaminans | 1 |
| Bacteria | Ruminococcus sp. AF31-8BH | 1 |
| Bacteria | Lactobacillus amylovorus GRL1118 | 1 |
| Bacteria | Nitrobacter vulgaris | 2 |
| Bacteria | Herbaspirillum sp. K1R23-30 | 1 |
| Bacteria | Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377 | 1 |
| Bacteria | Pseudocitrobacter faecalis | 1 |
| Bacteria | Sedimentitalea nanhaiensis | 1 |
| Bacteria | Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 | 1 |
| Bacteria | Spirochaeta sp. | 1 |
| Bacteria | Firmicutes bacterium ADurb.Bin182 | 1 |
| Bacteria | Chlorobium phaeovibrioides | 1 |
| Bacteria | Lysobacter soli | 1 |
| Invertebrates | Habropoda laboriosa | 1 |
| Bacteria | Megasphaera micronuciformis F0359 | 1 |
| Bacteria | Paraburkholderia symbiotica | 2 |
| Bacteria | Acinetobacter sp. FDAARGOS_558 | 2 |
| Bacteria | Curtobacterium sp. MCLR17_007 | 1 |
| Bacteria | Thalassolituus oleivorans | 1 |
| Bacteria | Marinobacter gudaonensis | 2 |
| Bacteria | Tenacibaculum mesophilum | 1 |
| Bacteria | Oscillibacter sp. 1-3 | 2 |
| Bacteria | Mycoplasma anatis 1340 | 3 |
| Bacteria | Mycoplana dimorpha | 1 |
| Bacteria | Stenotrophomonas sp. ZAC14D1_NAIMI4_6 | 1 |
| Bacteria | Nocardioides exalbidus | 3 |
| Bacteria | Rhizobium etli bv. mimosae str. Mim1 | 1 |
| Bacteria | Vibrio sp. JCM 19053 | 2 |
| Bacteria | Sphingomonas sp. 28-63-12 | 1 |
| Bacteria | Rhodospirillum rubrum ATCC 11170 | 2 |
| Bacteria | Leptospira fainei serovar Hurstbridge str. BUT 6 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.005.03.2.1 | 1 |
| Bacteria | Proteobacteria bacterium ST_bin13 | 1 |
| Bacteria | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 1 |
| Bacteria | Lysinibacillus sp. 2017 | 1 |
| Bacteria | Streptomyces sp. ADI96-02 | 1 |
| Bacteria | Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_12_FULL_38_15 | 1 |
| Bacteria | Nitrosomonas sp. Nm141 | 1 |
| Bacteria | Candidatus Burkholderia verschuerenii | 1 |
| Bacteria | Halothiobacillus sp. 24-54-40 | 1 |
| Bacteria | Pseudomonas sp. FFUP_PS_473 | 1 |
| Bacteria | Chlamydia muridarum str. Nigg | 1 |
| Bacteria | Legionella jamestowniensis | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_46_8 | 1 |
| Bacteria | Chlamydiae bacterium SM23_39 | 2 |
| Bacteria | bacterium HR11 | 1 |
| Bacteria | Clostridium sp. IBUN125C | 2 |
| Bacteria | Thalassobaculum litoreum DSM 18839 | 1 |
| Bacteria | Bifidobacterium bombi DSM 19703 | 2 |
| Bacteria | Microbacterium sp. 71-36 | 1 |
| Bacteria | Facklamia languida CCUG 37842 | 1 |
| Mammals | Desmodus rotundus | 1 |
| Bacteria | Desulfurella multipotens | 1 |
| Bacteria | Mycoavidus cysteinexigens | 1 |
| Bacteria | Roseburia intestinalis | 1 |
| Bacteria | Bacillus cereus VD146 | 1 |
| Bacteria | Pseudomonas agarici | 2 |
| Bacteria | Erythrobacter sp. HN-E23 | 1 |
| Bacteria | Mobilicoccus pelagius NBRC 104925 | 2 |
| Bacteria | Lactobacillus pentosiphilus | 1 |
| Bacteria | Streptomyces griseorubiginosus | 1 |
| Bacteria | Streptomyces caeruleatus | 2 |
| Bacteria | Rhodopirellula baltica SH28 | 2 |
| Bacteria | Pseudomonadaceae bacterium | 1 |
| Bacteria | Lachnoclostridium sp. An181 | 1 |
| Bacteria | Rodentibacter heidelbergensis | 2 |
| Bacteria | Gemmatimonas sp. SM23_52 | 3 |
| Bacteria | Bacillus coagulans DSM 1 = ATCC 7050 | 2 |
| Bacteria | Janthinobacterium sp. B9-8 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.004.09.1.2 | 1 |
| Bacteria | Paenibacillus sp. VTT E-133280 | 1 |
| Bacteria | Streptomyces sp. F-1 | 1 |
| Bacteria | Zymomonas mobilis subsp. mobilis NRRL B-12526 | 1 |
| Bacteria | Aggregatibacter actinomycetemcomitans | 1 |
| Bacteria | Mycobacterium sp. djl-10 | 1 |
| Bacteria | Clostridium sp. TF11-13AC | 1 |
| Bacteria | Ketobacter sp. | 1 |
| Bacteria | Nitrosomonas sp. Nm58 | 1 |
| Bacteria | Georgenia satyanarayanai | 1 |
| Bacteria | Nitratireductor sp. ES.061 | 1 |
| Bacteria | Mycobacterium sp. ACS4331 | 3 |
| Bacteria | Novosphingobium sp. ST904 | 1 |
| Bacteria | Polynucleobacter cosmopolitanus | 1 |
| Bacteria | Acinetobacter haemolyticus ATCC 19194 | 1 |
| Bacteria | Syntrophorhabdus sp. PtaU1.Bin153 | 1 |
| Invertebrates | Amblyomma triste | 1 |
| Bacteria | Coprococcus comes | 1 |
| Bacteria | Rhodococcus sp. RD6.2 | 1 |
| Bacteria | Bradyrhizobium retamae | 1 |
| Bacteria | Bordetella trematum | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16 | 2 |
| Bacteria | [Eubacterium] siraeum | 1 |
| Bacteria | Tritonibacter horizontis | 1 |
| Bacteria | Williamsia sp. D3 | 1 |
| Bacteria | Rhizobium leguminosarum bv. trifolii WSM2012 | 2 |
| Bacteria | Moraxella macacae 0408225 | 1 |
| Bacteria | Kurthia sp. 11kri321 | 1 |
| Bacteria | Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 | 1 |
| Bacteria | Parvularcula sp. | 1 |
| Bacteria | Marinicauda sp. WD6-1 | 1 |
| Bacteria | Borrelia crocidurae DOU | 1 |
| Bacteria | Olsenella sp. DNF00959 | 5 |
| Bacteria | Desulfuromonadales bacterium C00003068 | 1 |
| Bacteria | Litoreibacter ascidiaceicola | 1 |
| Bacteria | Exiguobacterium sp. KKBO11 | 1 |
| Bacteria | Psychromonas sp. MB-3u-54 | 2 |
| Bacteria | Rhodobacterales bacterium 59_46_T64 | 1 |
| Bacteria | Nitrincola nitratireducens | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_43_15 | 1 |
| Bacteria | Candidatus Rhodoluna planktonica | 2 |
| Bacteria | Coraliomargarita sp. | 2 |
| Bacteria | Rhodobacter vinaykumarii | 1 |
| Bacteria | Butyrivibrio sp. INlla14 | 1 |
| Plants and Fungi | Gracilariopsis chorda | 1 |
| Bacteria | Couchioplanes caeruleus subsp. caeruleus | 1 |
| Bacteria | Paraburkholderia hospita | 1 |
| Bacteria | [Clostridium] cf. saccharolyticum K10 | 1 |
| Bacteria | Chloroflexus aggregans DSM 9485 | 1 |
| Bacteria | Burkholderiales bacterium JOSHI_001 | 1 |
| Bacteria | Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 | 1 |
| Bacteria | Nitrospira bacterium SG8_3 | 1 |
| Bacteria | Mycolicibacterium brumae | 2 |
| Bacteria | Fibrobacter sp. UWOS | 1 |
| Bacteria | Bacillus cereus AH820 | 1 |
| Bacteria | Noviherbaspirillum autotrophicum | 1 |
| Bacteria | Moraxella bovoculi 237 | 1 |
| Bacteria | Staphylococcus haemolyticus JCSC1435 | 1 |
| Bacteria | Bacillus pseudofirmus | 1 |
| Bacteria | bacterium (Candidatus Ratteibacteria) CG_4_9_14_3_um_filter_41_21 | 2 |
| Bacteria | Gulbenkiania indica | 1 |
| Bacteria | Inmirania thermothiophila | 1 |
| Bacteria | Streptomyces sp. MnatMP-M17 | 1 |
| Bacteria | Rhizobium leguminosarum bv. trifolii WSM597 | 1 |
| Bacteria | Polaromonas sp. CF318 | 1 |
| Bacteria | Escherichia coli 5-366-08_S1_C3 | 3 |
| Bacteria | Curtobacterium sp. MCPF17_002 | 1 |
| Bacteria | Rhizobium lusitanum | 1 |
| Bacteria | Actinomadura sp. LHW52907 | 1 |
| Bacteria | Sphaerotilus hippei | 1 |
| Bacteria | Verrucomicrobia bacterium CG1_02_43_26 | 1 |
| Bacteria | Bifidobacterium pseudolongum subsp. globosum | 1 |
| Bacteria | Burkholderia sp. AU17325 | 1 |
| Bacteria | Calderihabitans maritimus | 1 |
| Bacteria | Serratia plymuthica | 1 |
| Bacteria | Corynebacterium flavescens | 2 |
| Bacteria | Aquisalimonas asiatica | 1 |
| Vertebrates | Cyprinodon nevadensis amargosae | 1 |
| Bacteria | Acidithiobacillus sp. | 1 |
| Bacteria | Haloarcula marismortui ATCC 43049 | 1 |
| Bacteria | Hahella sp. CCB-MM4 | 1 |
| Bacteria | Syntrophorhabdus sp. PtaU1.Bin058 | 1 |
| Bacteria | [Haemophilus] ducreyi 35000HP | 2 |
| Bacteria | Terrabacter sp. Root85 | 1 |
| Bacteria | Streptomyces sp. RP5T | 2 |
| Bacteria | Anaerococcus sp. HMSC065G05 | 2 |
| Bacteria | Microbulbifer agarilyticus | 1 |
| Bacteria | Sphingomonas sp. Leaf198 | 1 |
| Bacteria | Planomicrobium sp. MB-3u-38 | 1 |
| Bacteria | Luteimicrobium subarcticum | 1 |
| Bacteria | Kocuria sp. 442 | 1 |
| Bacteria | Aeromicrobium marinum DSM 15272 | 1 |
| Bacteria | Marinospirillum celere | 1 |
| Bacteria | Blautia sp. An46 | 1 |
| Bacteria | Neptunomonas qingdaonensis | 1 |
| Bacteria | Lachnospiraceae bacterium 10-1 | 1 |
| Bacteria | Paraburkholderia silvatlantica | 1 |
| Bacteria | Lampropedia cohaerens | 1 |
| Bacteria | Tyzzerella nexilis DSM 1787 | 1 |
| Environmental samples | Eubacterium sp. CAG:202 | 1 |
| Bacteria | Pseudomonas xanthomarina | 2 |
| Bacteria | Thermodesulforhabdus norvegica | 1 |
| Bacteria | Leptospira weilii str. UI 13098 | 1 |
| Bacteria | Rhodobacter sp. SW2 | 1 |
| Bacteria | Hippea maritima DSM 10411 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.004.01.1.1 | 1 |
| Bacteria | Klenkia brasiliensis | 3 |
| Bacteria | Streptococcus sanguinis SK330 | 1 |
| Bacteria | Kingella kingae | 1 |
| Bacteria | Bacteroidetes bacterium ADurb.Bin008 | 1 |
| Bacteria | Stenotrophomonas panacihumi | 1 |
| Bacteria | Brevibacterium siliguriense | 1 |
| Bacteria | Mesoplasma florum L1 | 1 |
| Bacteria | Gammaproteobacteria bacterium 54_18_T64 | 1 |
| Bacteria | Kroppenstedtia eburnea | 1 |
| Bacteria | Hydrogenophilales bacterium 17-61-9 | 1 |
| Bacteria | Anaerovibrio lipolyticus | 1 |
| Bacteria | Erwinia sp. JUb26 | 1 |
| Bacteria | Bacillus sp. UMB0893 | 1 |
| Bacteria | Nitrospira bacterium SM23_35 | 1 |
| Bacteria | Rhizobium sp. LC145 | 1 |
| Bacteria | Cyclobacterium halophilum | 1 |
| Bacteria | Candidatus Cloacimonetes bacterium ADurb.Bin003 | 1 |
| Bacteria | Mycoplasma crocodyli MP145 | 1 |
| Bacteria | Rhizobiales bacterium GAS113 | 1 |
| Bacteria | Azospirillum sp. 51_20 | 1 |
| Bacteria | alpha proteobacterium MED-G10 | 1 |
| Bacteria | Tropicibacter naphthalenivorans | 1 |
| Bacteria | Methylobacterium sp. ME121 | 1 |
| Bacteria | Fibrobacter sp. UWH1 | 1 |
| Bacteria | Pseudoalteromonadaceae bacterium | 1 |
| Bacteria | Xanthomonadaceae bacterium NML93-0399 | 1 |
| Bacteria | Legionella lansingensis | 1 |
| Bacteria | Novosphingobium sp. TH158 | 1 |
| Bacteria | Starkeya novella DSM 506 | 1 |
| Bacteria | Sphingobium sp. 66-54 | 1 |
| Bacteria | Acidobacteria bacterium SCN 69-37 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RBG_13_41_10 | 1 |
| Bacteria | candidate division KSB1 bacterium 4572_119 | 1 |
| Bacteria | Clostridium sp. OM05-9 | 1 |
| Bacteria | Carboxydocella thermautotrophica | 1 |
| Bacteria | Bacillus cereus 03BB102 | 1 |
| Bacteria | Sphingomonadales bacterium 12-68-11 | 1 |
| Bacteria | Cupriavidus sp. YR651 | 1 |
| Bacteria | candidate division BRC1 bacterium ADurb.BinA292 | 2 |
| Bacteria | Sphingobium sp. LB126 | 1 |
| Bacteria | Streptococcus dysgalactiae | 1 |
| Bacteria | Kosakonia oryziphila | 1 |
| Bacteria | Arthrobacter sp. EPSL27 | 1 |
| Bacteria | Rhodobacteraceae bacterium HTCC2150 | 1 |
| Bacteria | Sphaerotilus natans subsp. natans DSM 6575 | 1 |
| Bacteria | Planktomarina temperata RCA23 | 1 |
| Bacteria | Nocardiopsis gilva YIM 90087 | 2 |
| Environmental samples | uncultured bacterium 20 | 1 |
| Bacteria | Idiomarina sp. A28L | 1 |
| Bacteria | Variovorax sp. OV329 | 1 |
| Bacteria | Tenacibaculum litoreum | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.12.1.1 | 1 |
| Bacteria | Mesorhizobium amorphae CCNWGS0123 | 1 |
| Bacteria | Kluyvera sp. Nf5 | 1 |
| Bacteria | Janibacter melonis | 1 |
| Bacteria | Streptomyces sp. IMTB 2501 | 1 |
| Bacteria | Streptomyces sp. NRRL F-7442 | 1 |
| Bacteria | Mesorhizobium sp. Root102 | 1 |
| Bacteria | Streptomyces glaucescens | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED92 | 1 |
| Bacteria | Gemella sanguinis | 1 |
| Bacteria | Gemmobacter aquatilis | 1 |
| Bacteria | Sinimarinibacterium flocculans | 1 |
| Bacteria | Loktanella sp. S4079 | 1 |
| Bacteria | Gordonia bronchialis DSM 43247 | 1 |
| Bacteria | Gallaecimonas pentaromativorans | 1 |
| Bacteria | Polynucleobacter victoriensis | 1 |
| Bacteria | Oceanospirillales bacterium TMED33 | 1 |
| Bacteria | Hasllibacter halocynthiae | 1 |
| Bacteria | Butyrivibrio fibrisolvens | 1 |
| Bacteria | Geothermobacter sp. HR-1 | 1 |
| Bacteria | Halomonas subglaciescola | 1 |
| Bacteria | Deinococcus grandis | 1 |
| Bacteria | Marinobacterium stanieri | 1 |
| Bacteria | Neisseria weaveri | 1 |
| Bacteria | blood disease bacterium A2-HR MARDI | 1 |
| Bacteria | Sphingomonas sp. YR710 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.007.01.1.1 | 1 |
| Bacteria | Lactococcus lactis subsp. cremoris TIFN6 | 1 |
| Bacteria | Pseudonocardia autotrophica | 1 |
| Bacteria | Xanthomonadaceae bacterium NML93-0792 | 1 |
| Bacteria | Rhodobacteraceae bacterium HIMB11 | 1 |
| Environmental samples | Coprococcus comes CAG:19 | 1 |
| Bacteria | Treponema denticola AL-2 | 1 |
| Bacteria | Bacillus sp. FJAT-27916 | 1 |
| Bacteria | Bradyrhizobium sp. STM 3843 | 1 |
| Bacteria | Desulfovibrio salexigens DSM 2638 | 1 |
| Bacteria | Candidatus Latescibacteria bacterium | 2 |
| Bacteria | Staphylococcus sp. EGD-HP3 | 6 |
| Bacteria | Sphingopyxis sp. GW247-27LB | 1 |
| Vertebrates | Xenopus laevis | 20 |
| Bacteria | Lactobacillus pentosus IG1 | 6 |
| Invertebrates | Trichuris trichiura | 7 |
| Bacteria | Mycobacteroides abscessus | 9 |
| Bacteria | Arthrobacter sp. UCD-GKA | 2 |
| Bacteria | Variovorax sp. HW608 | 2 |
| Bacteria | Bifidobacterium breve UCC2003 | 3 |
| Bacteria | Leptospira borgpetersenii serovar Pomona str. 200901868 | 1 |
| Bacteria | Bacillus infantis NRRL B-14911 | 7 |
| Bacteria | Akkermansia sp. KLE1798 | 1 |
| Bacteria | Rodentibacter sp. Ppn85 | 3 |
| Bacteria | Actinomyces radicidentis | 2 |
| Bacteria | Rhizobium sp. KAs_5_22 | 1 |
| Bacteria | Spiroplasma turonicum | 4 |
| Primates | Chlorocebus sabaeus | 9 |
| Bacteria | Trichococcus palustris | 12 |
| Bacteria | Streptomyces sp. NRRL S-1521 | 2 |
| Bacteria | Altererythrobacter atlanticus | 1 |
| Bacteria | Bacillus sp. YSP-3 | 7 |
| Bacteria | candidate division KSB1 bacterium 4484_87 | 2 |
| Bacteria | Falsibacillus pallidus | 4 |
| Bacteria | Bacillus camelliae | 11 |
| Bacteria | Blastochloris viridis | 1 |
| Environmental samples | uncultured Roseburia sp. | 2 |
| Bacteria | Pseudomonas sp. CMR5c | 1 |
| Bacteria | Olsenella uli DSM 7084 | 8 |
| Invertebrates | Octopus bimaculoides | 5 |
| Bacteria | Deferribacter desulfuricans SSM1 | 1 |
| Bacteria | Selenomonas sp. oral taxon 137 str. F0430 | 5 |
| Bacteria | Pseudomonas sp. ABAC61 | 4 |
| Bacteria | Candidatus Aegiribacteria bacterium MLS_C | 7 |
| Bacteria | Proteobacteria bacterium | 15 |
| Bacteria | Gemmatimonadetes bacterium | 38 |
| Bacteria | Enterococcus faecalis | 22 |
| Bacteria | Streptococcus anginosus F0211 | 1 |
| Bacteria | Clostridioides difficile ATCC 9689 = DSM 1296 | 12 |
| Bacteria | Collinsella tanakaei YIT 12063 | 7 |
| Bacteria | Amantichitinum ursilacus | 5 |
| Invertebrates | Folsomia candida | 10 |
| Bacteria | Halomonas sp. G11 | 1 |
| Bacteria | Escherichia coli KTE100 | 4 |
| Bacteria | Lactobacillus rossiae DSM 15814 | 7 |
| Bacteria | Bacillus litoralis | 7 |
| Bacteria | Propionibacterium sp. KPL2000 | 3 |
| Bacteria | Mycoplasma caviae | 4 |
| Bacteria | Lactococcus garvieae TRF1 | 3 |
| Bacteria | Novosphingobium sp. KN65.2 | 1 |
| Bacteria | Microbacterium sp. No. 7 | 4 |
| Bacteria | Vibrio sp. JCM 19236 | 9 |
| Bacteria | Shigella sp. FC2928 | 4 |
| Bacteria | Jeotgalibacillus proteolyticus | 8 |
| Mammals | Ursus americanus | 20 |
| Bacteria | Caloramator australicus RC3 | 4 |
| Bacteria | Mizugakiibacter sediminis | 1 |
| Bacteria | Devosia sp. I507 | 3 |
| Invertebrates | Trichinella nelsoni | 14 |
| Bacteria | Clostridium isatidis | 9 |
| Bacteria | Treponema succinifaciens DSM 2489 | 5 |
| Bacteria | Lactobacillus paralimentarius DSM 13961 = JCM 10707 | 11 |
| Bacteria | Streptococcus hyointestinalis | 3 |
| Invertebrates | Amblyomma cajennense | 1 |
| Bacteria | Thermococcus sp. P6 | 1 |
| Invertebrates | Teladorsagia circumcincta | 5 |
| Bacteria | Turicibacter sanguinis | 3 |
| Bacteria | Lachnospiraceae bacterium AM21-21 | 9 |
| Bacteria | Zobellella denitrificans | 4 |
| Bacteria | Thiotrichales bacterium | 4 |
| Bacteria | Fictibacillus solisalsi | 2 |
| Vertebrates | Hirundo rustica rustica | 11 |
| Bacteria | Agrobacterium sp. NCPPB 925 | 1 |
| Bacteria | Verrucomicrobia bacterium GWF2_62_7 | 4 |
| Bacteria | Bacillus sp. 7586-K | 8 |
| Bacteria | Streptococcus pseudoporcinus LQ 940-04 | 10 |
| Bacteria | Vibrio parahaemolyticus O1:Kuk str. FDA_R31 | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Lexington | 4 |
| Bacteria | Chania multitudinisentens RB-25 | 7 |
| Bacteria | Bacillus aerius | 6 |
| Bacteria | Absiella sp. AM27-20 | 14 |
| Bacteria | Desulfonatronospira thiodismutans ASO3-1 | 1 |
| Bacteria | Hydrogenophaga sp. PBC | 1 |
| Mammals | Physeter catodon | 34 |
| Bacteria | Morganella morganii subsp. morganii KT | 2 |
| Bacteria | Pantoea sp. VS1 | 3 |
| Bacteria | Bacillus okuhidensis | 2 |
| Bacteria | Paenibacillus lactis 154 | 5 |
| Bacteria | Citreicella sp. 357 | 2 |
| Bacteria | Escherichia coli O11 | 3 |
| Bacteria | Lachnospiraceae bacterium TWA4 | 4 |
| Bacteria | Streptomyces sp. CB02058 | 1 |
| Bacteria | Gordonia malaquae NBRC 108250 | 1 |
| Bacteria | Geobacillus sp. B4113_201601 | 4 |
| Bacteria | Ignavibacteria bacterium CG_4_8_14_3_um_filter_37_9 | 1 |
| Bacteria | Acinetobacter baylyi ADP1 | 2 |
| Bacteria | Hungatella hathewayi | 44 |
| Bacteria | Brevibacillus laterosporus LMG 15441 | 10 |
| Bacteria | Bacillus sp. FJAT-25509 | 8 |
| Bacteria | Thalassococcus sp. WRAS1 | 1 |
| Vertebrates | Esox lucius | 49 |
| Bacteria | Carnobacterium maltaromaticum LMA28 | 12 |
| Bacteria | Litoreibacter albidus | 1 |
| Bacteria | Kingella denitrificans ATCC 33394 | 1 |
| Bacteria | Listeria monocytogenes | 42 |
| Bacteria | Lelliottia amnigena | 8 |
| Bacteria | Erysipelotrichaceae bacterium AM17-60 | 3 |
| Bacteria | Colwellia sp. MT41 | 1 |
| Bacteria | Enterococcus faecalis EnGen0426 | 6 |
| Bacteria | Vibrio sp. BEI207 | 9 |
| Bacteria | Lactobacillus heilongjiangensis | 8 |
| Bacteria | Acinetobacter baumannii | 8 |
| Bacteria | Enterococcus faecium SD3B-2 | 6 |
| Bacteria | Vibrio fortis | 5 |
| Bacteria | Streptococcus dysgalactiae subsp. equisimilis GGS_124 | 3 |
| Bacteria | Spirochaetes bacterium ADurb.Bin110 | 2 |
| Bacteria | Tetragenococcus halophilus NBRC 12172 | 17 |
| Bacteria | Rhodopirellula maiorica SM1 | 3 |
| Vertebrates | Struthio camelus australis | 6 |
| Bacteria | Streptomyces sp. Root369 | 1 |
| Bacteria | Curtobacterium sp. HSID17257 | 3 |
| Bacteria | Pseudoalteromonas sp. Xi13 | 1 |
| Invertebrates | Amphimedon queenslandica | 2 |
| Bacteria | Serratia odorifera DSM 4582 | 7 |
| Bacteria | Clostridium cavendishii DSM 21758 | 8 |
| Bacteria | Escherichia coli | 68 |
| Bacteria | Colwellia sp. 75C3 | 1 |
| Bacteria | Mycobacterium sp. UNC267MFSha1.1M11 | 2 |
| Bacteria | Fulvimarina manganoxydans | 1 |
| Bacteria | Neisseria wadsworthii 9715 | 1 |
| Bacteria | Enterobacter huaxiensis | 16 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.003.02.2.1 | 1 |
| Primates | Pan paniscus | 36 |
| Bacteria | Erysipelotrichaceae bacterium 3_1_53 | 33 |
| Bacteria | Geobacillus sp. T6 | 1 |
| Bacteria | Lactobacillus paracasei | 30 |
| Bacteria | Mycolicibacterium chitae | 3 |
| Vertebrates | Kryptolebias marmoratus | 33 |
| Bacteria | Fusobacterium necrophorum subsp. funduliforme | 5 |
| Bacteria | Desulfoluna spongiiphila | 3 |
| Bacteria | Chlamydiales bacterium SCGC AB-751-O23 | 3 |
| Bacteria | Enterococcus mundtii | 8 |
| Bacteria | Escherichia coli 2.3916 | 9 |
| Invertebrates | Clastoptera arizonana | 6 |
| Bacteria | Streptococcus troglodytae | 3 |
| Bacteria | Ectothiorhodospiraceae bacterium | 1 |
| Bacteria | Pseudomonas alkylphenolica | 3 |
| Bacteria | Acinetobacter apis | 2 |
| Bacteria | Planifilum fulgidum | 7 |
| Bacteria | Spirochaeta africana DSM 8902 | 9 |
| Bacteria | Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 | 4 |
| Bacteria | Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 | 1 |
| Bacteria | Xenorhabdus bovienii str. puntauvense | 3 |
| Bacteria | Paraclostridium bifermentans ATCC 19299 | 6 |
| Bacteria | Rhizobium gallicum bv. gallicum R602 | 3 |
| Bacteria | Streptomyces gilvigriseus | 1 |
| Bacteria | Planctomycetes bacterium SM23_25 | 2 |
| Bacteria | Bacillus atrophaeus 1942 | 4 |
| Bacteria | Robinsoniella sp. MCWD5 | 8 |
| Bacteria | Methylobacterium sp. yr596 | 1 |
| Bacteria | Mesorhizobium sp. YR577 | 1 |
| Bacteria | Acinetobacter pittii PHEA-2 | 2 |
| Bacteria | Lactobacillus ruminis | 1 |
| Bacteria | Nocardiopsis sinuspersici | 1 |
| Bacteria | Lactobacillus kullabergensis | 17 |
| Bacteria | Roseburia sp. | 2 |
| Bacteria | Streptococcus anginosus | 5 |
| Invertebrates | Lingula anatina | 9 |
| Bacteria | Paludisphaera borealis | 2 |
| Bacteria | Marinobacter nanhaiticus D15-8W | 2 |
| Bacteria | Clostridium frigidicarnis | 4 |
| Bacteria | Enorma massiliensis | 5 |
| Environmental samples | Clostridium hathewayi CAG:224 | 4 |
| Bacteria | Aerococcus urinae | 10 |
| Bacteria | Escherichia coli O157:H7 | 15 |
| Bacteria | Serratia sp. Ag1 | 3 |
| Bacteria | Gammaproteobacteria bacterium TMED133 | 1 |
| Bacteria | Aerococcaceae bacterium ZY16052 | 12 |
| Vertebrates | Hippocampus comes | 30 |
| Bacteria | Pseudomonas sp. | 9 |
| Bacteria | Muribacter muris | 4 |
| Bacteria | Escherichia coli MS 119-7 | 5 |
| Bacteria | Streptococcus uberis 0140J | 10 |
| Bacteria | Enterobacter sp. NFIX03 | 2 |
| Bacteria | Desulfosporosinus acidiphilus SJ4 | 4 |
| Bacteria | Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 | 6 |
| Bacteria | Lactobacillus rapi DSM 19907 = JCM 15042 | 5 |
| Invertebrates | Branchiostoma floridae | 5 |
| Bacteria | Paenibacillus polymyxa SC2 | 7 |
| Bacteria | Geomicrobium sp. JCM 19038 | 4 |
| Bacteria | delta proteobacterium ML8_D | 1 |
| Bacteria | Acetobacterium wieringae | 2 |
| Bacteria | Marinobacter lipolyticus SM19 | 1 |
| Bacteria | Rhodoblastus acidophilus | 1 |
| Invertebrates | Angiostrongylus costaricensis | 3 |
| Bacteria | Cryobacterium arcticum | 6 |
| Bacteria | Neisseria meningitidis Z2491 | 1 |
| Bacteria | Globicatella sp. HMSC072A10 | 8 |
| Bacteria | Epibacterium multivorans | 1 |
| Bacteria | Lactobacillus pentosus MP-10 | 7 |
| Bacteria | Virgibacillus halodenitrificans | 2 |
| Bacteria | Maledivibacter halophilus | 32 |
| Bacteria | Enterococcus sp. 3G1_DIV0629 | 1 |
| Bacteria | Gallionellales bacterium 24-53-125 | 1 |
| Bacteria | Pseudomonas protegens CHA0 | 1 |
| Bacteria | Streptomyces sp. NBRC 110027 | 3 |
| Bacteria | Xenorhabdus szentirmaii DSM 16338 | 3 |
| Bacteria | Epulopiscium sp. SCG-C07WGA-EpuloA2 | 5 |
| Bacteria | Brenneria sp. EniD312 | 6 |
| Bacteria | Rhodobacterales bacterium 52_120_T64 | 1 |
| Environmental samples | Lachnospiraceae bacterium CAG:25 | 11 |
| Vertebrates | Scleropages formosus | 42 |
| Bacteria | Photobacterium aquae | 5 |
| Bacteria | Thermoanaerobacter sp. | 6 |
| Bacteria | Lentibacter algarum | 1 |
| Bacteria | Rhodobacter blasticus DSM 2131 | 1 |
| Invertebrates | Wuchereria bancrofti | 6 |
| Bacteria | Staphylococcus chromogenes | 5 |
| Bacteria | Erysipelotrichaceae bacterium 2_2_44A | 28 |
| Bacteria | Aeromicrobium sp. PE09-221 | 5 |
| Bacteria | Aquitalea magnusonii | 3 |
| Bacteria | Marinobacterium lutimaris | 1 |
| Bacteria | Ralstonia pickettii OR214 | 1 |
| Bacteria | Erysipelotrichaceae bacterium I46 | 17 |
| Bacteria | Salmonella enterica subsp. enterica serovar Concord | 5 |
| Primates | Macaca fascicularis | 51 |
| Invertebrates | Graphocephala atropunctata | 3 |
| Bacteria | Geosporobacter ferrireducens | 16 |
| Bacteria | bacterium HR21 | 1 |
| Bacteria | Clostridium grantii DSM 8605 | 7 |
| Bacteria | Paeniglutamicibacter gangotriensis Lz1y | 3 |
| Bacteria | Listeria monocytogenes CFSAN002350 | 7 |
| Invertebrates | Litomosoides sigmodontis | 4 |
| Bacteria | Oceanobacillus oncorhynchi | 17 |
| Bacteria | Rhodococcus sp. MEB064 | 1 |
| Bacteria | Agrobacterium rhizogenes NBRC 13257 | 1 |
| Bacteria | Enterobacter cloacae subsp. cloacae ATCC 13047 | 6 |
| Bacteria | Betaproteobacteria bacterium SCGC AG-212-J23 | 1 |
| Bacteria | Sporolactobacillus inulinus CASD | 5 |
| Bacteria | Cellulomonas sp. WB94 | 2 |
| Bacteria | Clostridium sp. HGF2 | 36 |
| Bacteria | Pseudomonas sp. VI4.1 | 3 |
| Bacteria | Cellvibrionales bacterium | 3 |
| Bacteria | Photobacterium damselae subsp. damselae CIP 102761 | 4 |
| Bacteria | Candidatus Glassbacteria bacterium RBG_16_58_8 | 1 |
| Bacteria | Bacillus sp. HMF5848 | 3 |
| Mammals | Myotis lucifugus | 10 |
| Bacteria | Caballeronia arvi | 1 |
| Bacteria | Oceanobacillus sp. 160 | 5 |
| Bacteria | Photobacterium ganghwense | 3 |
| Bacteria | Escherichia coli 110957 | 3 |
| Bacteria | Photobacterium lipolyticum | 5 |
| Bacteria | Hyphomicrobium facile | 2 |
| Bacteria | Providencia rustigianii | 2 |
| Environmental samples | groundwater metagenome | 6 |
| Bacteria | Sphingorhabdus sp. YGSMI21 | 1 |
| Bacteria | gamma proteobacterium HTCC2207 | 1 |
| Bacteria | Pseudoflavonifractor capillosus ATCC 29799 | 2 |
| Bacteria | Citrobacter sp. A316 | 1 |
| Bacteria | Enterobacter cloacae | 31 |
| Bacteria | Vibrio diazotrophicus | 11 |
| Bacteria | bacterium TMED88 | 2 |
| Bacteria | Enterococcus sp. 10A9_DIV0425 | 11 |
| Bacteria | Paenibacillus sp. 7884-2 | 11 |
| Bacteria | Novosphingobium barchaimii | 2 |
| Bacteria | Rhodopirellula islandica | 3 |
| Bacteria | Shigella flexneri 1235-66 | 6 |
| Vertebrates | Tinamus guttatus | 3 |
| Bacteria | Enterococcus sp. 6D12_DIV0197 | 3 |
| Bacteria | Erysipelotrichaceae bacterium NYU-BL-F16 | 6 |
| Bacteria | Lactobacillus helveticus CIRM-BIA 951 | 2 |
| Bacteria | Paenibacillus lentus | 6 |
| Bacteria | Lactobacillus aviarius subsp. aviarius DSM 20655 | 1 |
| Bacteria | Clostridium pasteurianum | 6 |
| Bacteria | Mycoplasma hyopneumoniae | 2 |
| Rodents | Rattus norvegicus | 23 |
| Bacteria | Arthrobacter sp. Soil782 | 3 |
| Bacteria | Escherichia coli DEC2E | 4 |
| Bacteria | Lactobacillus rhamnosus DSM 14870 | 4 |
| Bacteria | Propionispora sp. 2/2-37 | 39 |
| Bacteria | Bacillus glycinifermentans | 8 |
| Primates | Carlito syrichta | 17 |
| Bacteria | Vibrio sp. 10N.286.49.B3 | 4 |
| Bacteria | Arthrobacter sp. FB24 | 3 |
| Bacteria | Xanthomonas hyacinthi | 2 |
| Bacteria | Paenibacillus sp. FSL R7-0331 | 4 |
| Bacteria | Candidatus Omnitrophica bacterium 4484_70.1 | 4 |
| Bacteria | Brevundimonas subvibrioides | 1 |
| Bacteria | Enterococcus faecium E417 | 11 |
| Bacteria | Planococcus sp. PAMC 21323 | 3 |
| Bacteria | Listeria booriae | 15 |
| Bacteria | Bacillus sp. LL01 | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Montevideo | 6 |
| Bacteria | Hyphomicrobium sp. MC1 | 2 |
| Bacteria | Oligella ureolytica | 1 |
| Bacteria | Candidatus Cloacimonas sp. 4484_209 | 3 |
| Vertebrates | Acanthochromis polyacanthus | 38 |
| Bacteria | Grimontia marina | 5 |
| Bacteria | Lactobacillus farciminis KCTC 3681 = DSM 20184 | 4 |
| Bacteria | Phytoactinopolyspora sp. YIM 96934 | 3 |
| Bacteria | Lactococcus lactis subsp. cremoris | 7 |
| Bacteria | Pseudomonas sp. TKO29 | 2 |
| Bacteria | Enterococcus italicus DSM 15952 | 7 |
| Bacteria | Hafnia alvei ATCC 13337 | 10 |
| Bacteria | Bacillus sp. HMSC76G11 | 5 |
| Bacteria | Streptococcus equi subsp. equi | 6 |
| Bacteria | Pantoea anthophila | 1 |
| Invertebrates | Ciona intestinalis | 4 |
| Bacteria | Spartobacteria bacterium Tous-C9RFEB | 2 |
| Bacteria | Legionellales bacterium | 3 |
| Bacteria | Klebsiella pneumoniae subsp. pneumoniae | 16 |
| Bacteria | Avibacterium volantium | 3 |
| Vertebrates | Poecilia mexicana | 26 |
| Bacteria | Alkalibacterium sp. AK22 | 6 |
| Bacteria | Clostridium estertheticum subsp. estertheticum | 9 |
| Bacteria | Planctomycetes bacterium GWF2_50_10 | 4 |
| Bacteria | Sodalis sp. TME1 | 3 |
| Bacteria | Klebsiella quasipneumoniae | 8 |
| Bacteria | Carnobacterium alterfunditum | 6 |
| Bacteria | Pilibacter termitis | 14 |
| Bacteria | Clostridiales bacterium oral taxon 876 str. F0540 | 7 |
| Bacteria | Rhodothermaceae bacterium | 1 |
| Invertebrates | Trichinella nativa | 13 |
| Bacteria | Rahnella victoriana | 3 |
| Bacteria | Bacillus sp. AFS037270 | 12 |
| Bacteria | Bacillus salarius | 15 |
| Bacteria | Alkalibaculum bacchi | 4 |
| Bacteria | Desulfobacula sp. GWF2_41_7 | 2 |
| Bacteria | Enterococcus raffinosus ATCC 49464 | 29 |
| Bacteria | Phenylobacterium hankyongense | 1 |
| Bacteria | Halarchaeum sp. CBA1220 | 1 |
| Bacteria | Nocardiopsis sp. NRRL B-16309 | 1 |
| Bacteria | Fusobacterium necrophorum subsp. funduliforme B35 | 6 |
| Bacteria | Pseudomonas syringae pv. pisi str. 1704B | 3 |
| Bacteria | Sphingopyxis sp. H115 | 1 |
| Bacteria | Sporosarcina sp. BI001-red | 3 |
| Bacteria | Escherichia coli O104:H4 str. 2011C-3493 | 4 |
| Bacteria | Ralstonia solanacearum GMI1000 | 2 |
| Bacteria | Bacillus megaterium QM B1551 | 7 |
| Bacteria | Clostridium paraputrificum | 3 |
| Bacteria | Escherichia coli KTE64 | 4 |
| Bacteria | Bacillus obstructivus | 12 |
| Bacteria | Alteromonas sp. I10 | 1 |
| Mammals | Loxodonta africana | 16 |
| Mammals | Ursus maritimus | 55 |
| Bacteria | Pseudomonas syringae | 4 |
| Bacteria | Arsenicicoccus sp. oral taxon 190 | 2 |
| Bacteria | Parageobacillus thermoglucosidasius | 11 |
| Bacteria | Lactococcus piscium MKFS47 | 11 |
| Bacteria | Streptococcus parauberis NCFD 2020 | 6 |
| Bacteria | Peptococcaceae bacterium CEB3 | 5 |
| Bacteria | Lactobacillus amylovorus | 3 |
| Bacteria | Actinomyces viscosus | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Ohio | 4 |
| Bacteria | Arthrobacter subterraneus | 4 |
| Bacteria | Myxococcus fulvus 124B02 | 3 |
| Bacteria | Paraburkholderia sp. SOS3 | 2 |
| Bacteria | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | 3 |
| Bacteria | Clostridium roseum | 2 |
| Bacteria | Desulfobulbus propionicus DSM 2032 | 2 |
| Bacteria | Escherichia coli 907713 | 4 |
| Bacteria | Ruegeria sp. P4 | 1 |
| Bacteria | Rhodococcus triatomae | 1 |
| Bacteria | Lactobacillus sharpeae JCM 1186 = DSM 20505 | 5 |
| Bacteria | Elusimicrobia bacterium CG1_02_56_21 | 3 |
| Bacteria | Bacillus cucumis | 5 |
| Bacteria | Histidinibacterium lentulum | 1 |
| Bacteria | Malikia granosa | 1 |
| Bacteria | Serratia plymuthica PRI-2C | 1 |
| Bacteria | Paenibacillus sp. D9 | 2 |
| Bacteria | Escherichia coli PCN033 | 4 |
| Bacteria | Brachyspira pilosicoli 95/1000 | 6 |
| Bacteria | Novosphingobium lindaniclasticum LE124 | 1 |
| Bacteria | Nitrosomonas halophila | 1 |
| Mammals | Sus scrofa | 27 |
| Bacteria | Mycetocola lacteus | 2 |
| Bacteria | Intestinibacter bartlettii DORA_8_9 | 2 |
| Bacteria | Candidatus Arthromitus sp. SFB-mouse-Japan | 6 |
| Bacteria | Staphylococcus aureus subsp. aureus Z172 | 6 |
| Bacteria | Methylocella silvestris BL2 | 2 |
| Bacteria | Spirochaetes bacterium RBG_13_51_14 | 4 |
| Bacteria | Alcanivorax pacificus W11-5 | 1 |
| Bacteria | Corynebacterium ulcerans | 6 |
| Bacteria | Gammaproteobacteria bacterium TMED30 | 1 |
| Invertebrates | Onchocerca volvulus | 4 |
| Bacteria | Streptomyces sp. SAT1 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Irumu | 5 |
| Bacteria | Vibrio sp. ES.051 | 3 |
| Bacteria | Macrococcus canis | 4 |
| Bacteria | Marinovum sp. | 5 |
| Bacteria | Burkholderia cepacia JBK9 | 1 |
| Bacteria | Pediococcus pentosaceus ATCC 25745 | 3 |
| Bacteria | Isobaculum melis | 10 |
| Bacteria | Mesorhizobium metallidurans STM 2683 | 1 |
| Bacteria | Cedecea davisae DSM 4568 | 7 |
| Bacteria | Halolactibacillus miurensis | 9 |
| Bacteria | Mycoplasma canis UFG4 | 1 |
| Bacteria | Yoonia tamlensis | 1 |
| Bacteria | Lactobacillus silagincola | 1 |
| Bacteria | Solemya velesiana gill symbiont | 1 |
| Bacteria | Acetobacterium sp. MES1 | 1 |
| Bacteria | Mesorhizobium sp. SEMIA 3007 | 1 |
| Bacteria | Clostridiales bacterium KLE1615 | 1 |
| Invertebrates | Cryptotermes secundus | 4 |
| Bacteria | Chlamydia pneumoniae | 2 |
| Bacteria | Francisella hispaniensis FSC454 | 1 |
| Bacteria | Nesterenkonia sp. AN1 | 3 |
| Bacteria | Gemmatimonadetes bacterium GWC2_71_10 | 3 |
| Bacteria | Marinobacter sp. | 1 |
| Bacteria | Deinococcus ficus | 1 |
| Bacteria | Rhodopirellula bahusiensis | 1 |
| Environmental samples | Clostridium sp. CAG:127 | 1 |
| Bacteria | Yersinia enterocolitica subsp. enterocolitica 8081 | 1 |
| Bacteria | Agrococcus casei LMG 22410 | 2 |
| Bacteria | Spiroplasma alleghenense | 5 |
| Bacteria | Lactobacillus johnsonii NCC 533 | 2 |
| Bacteria | Xenorhabdus nematophila ATCC 19061 | 2 |
| Bacteria | Mycoplasma hyopneumoniae 7448 | 1 |
| Bacteria | Clostridium sp. C105KSO13 | 2 |
| Bacteria | Enterococcus faecalis S613 | 9 |
| Bacteria | Dickeya dadantii 3937 | 3 |
| Bacteria | Confluentimicrobium sp. | 2 |
| Bacteria | Pantoea sp. ARC607 | 1 |
| Environmental samples | Clostridium sp. CAG:217 | 1 |
| Bacteria | Vibrio sp. JB196 | 6 |
| Bacteria | Melaminivora sp. SC2-7 | 2 |
| Bacteria | Betaproteobacteria bacterium CG2_30_68_42 | 1 |
| Bacteria | Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120820-bin42 | 1 |
| Bacteria | Planctomycetes bacterium RBG_13_44_8b | 4 |
| Bacteria | Vibrio scophthalmi LMG 19158 | 5 |
| Bacteria | Paraburkholderia sp. BL23I1N1 | 1 |
| Bacteria | Bacillus sp. TS-2 | 6 |
| Bacteria | Thermoanaerobacter sp. X561 | 1 |
| Bacteria | Gordonia sputi NBRC 100414 | 1 |
| Bacteria | Actinomyces johnsonii F0510 | 1 |
| Bacteria | Fontibacillus panacisegetis | 2 |
| Bacteria | Rhizobium freirei PRF 81 | 2 |
| Bacteria | Streptomyces albus subsp. albus | 3 |
| Bacteria | Microbacterium sp. TNHR37B | 4 |
| Bacteria | Haemophilus paracuniculus | 3 |
| Bacteria | Trichococcus flocculiformis | 2 |
| Bacteria | Gracilibacillus orientalis | 11 |
| Bacteria | Brevibacillus sp. OK042 | 4 |
| Bacteria | Mariprofundus ferrinatatus | 1 |
| Bacteria | Catenovulum agarivorans DS-2 | 1 |
| Bacteria | Methylobacterium radiotolerans JCM 2831 | 2 |
| Bacteria | Massilimicrobiota timonensis | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPLOWO2_02_FULL_63_16 | 1 |
| Bacteria | Magnetospirillum magneticum AMB-1 | 1 |
| Bacteria | Streptococcus equi subsp. equi 4047 | 3 |
| Bacteria | Bacillus coagulans 36D1 | 3 |
| Bacteria | Faecalicatena orotica | 10 |
| Bacteria | Sinorhizobium fredii USDA 257 | 1 |
| Invertebrates | Solenopsis invicta | 2 |
| Bacteria | Rubritalea squalenifaciens DSM 18772 | 1 |
| Bacteria | Myxococcus xanthus DK 1622 | 2 |
| Bacteria | Lactobacillus salivarius SMXD51 | 1 |
| Bacteria | Paraburkholderia sacchari | 1 |
| Bacteria | Idiomarina sp. OT37-5b | 1 |
| Bacteria | Hyphomicrobium sp. SCN 65-11 | 2 |
| Bacteria | Gallibacterium anatis 4895 | 1 |
| Bacteria | Acidipropionibacterium acidipropionici | 2 |
| Bacteria | Mycoplasma bovirhinis | 2 |
| Bacteria | Clostridium sp. CT7 | 8 |
| Bacteria | Paraburkholderia sartisoli | 2 |
| Bacteria | Pseudomonas sp. NFPP22 | 1 |
| Bacteria | candidate division WOR-3 bacterium 4484_100 | 3 |
| Bacteria | Pseudomonas sp. M30-35 | 1 |
| Bacteria | Hyphomonas johnsonii MHS-2 | 1 |
| Bacteria | Cohnella kolymensis | 2 |
| Bacteria | Bacillus halodurans | 1 |
| Bacteria | Sphingobium yanoikuyae ATCC 51230 | 1 |
| Bacteria | Spiroplasma taiwanense CT-1 | 2 |
| Bacteria | Shewanella marisflavi | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Braenderup | 6 |
| Bacteria | Burkholderia cenocepacia MC0-3 | 1 |
| Bacteria | Acidobacteria bacterium | 2 |
| Bacteria | Novosphingobium subterraneum | 1 |
| Bacteria | Escherichia coli KTE182 | 3 |
| Bacteria | Vibrio sp. | 4 |
| Bacteria | Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 | 2 |
| Bacteria | Streptomyces pseudovenezuelae | 2 |
| Bacteria | Nitrospina sp. SCGC_AAA799_C22 | 1 |
| Bacteria | Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_50_16 | 3 |
| Bacteria | Dictyoglomus sp. NZ13-RE01 | 1 |
| Bacteria | Enterococcus cecorum | 6 |
| Bacteria | Lactobacillus sp. ASF360 | 4 |
| Bacteria | Megasphaera sp. DJF_B143 | 1 |
| Bacteria | Azospirillum lipoferum | 3 |
| Bacteria | Micavibrio sp. TMED27 | 1 |
| Bacteria | Escherichia coli 55989 | 4 |
| Bacteria | Bifidobacterium bohemicum DSM 22767 | 3 |
| Bacteria | Marinobacter sp. BSs20148 | 1 |
| Bacteria | Pelagibacterales bacterium | 5 |
| Bacteria | Rathayibacter sp. PhB186 | 2 |
| Bacteria | Fusobacterium necrophorum BFTR-2 | 4 |
| Bacteria | Salinivibrio sp. ES.052 | 3 |
| Bacteria | Sphingomonas sp. Leaf357 | 1 |
| Bacteria | Clostridium pasteurianum DSM 525 = ATCC 6013 | 7 |
| Bacteria | Rhodospirillales bacterium | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.005.03.1.1 | 2 |
| Bacteria | Listeria cornellensis FSL F6-0969 | 6 |
| Bacteria | Ignavibacteria bacterium CG08_land_8_20_14_0_20_37_9 | 1 |
| Invertebrates | Trichuris muris | 5 |
| Bacteria | Bacillus sp. AFS002410 | 3 |
| Bacteria | Pasteurella multocida subsp. multocida str. Anand1_buffalo | 1 |
| Bacteria | Rhodococcus sp. AD45 | 1 |
| Bacteria | SAR92 bacterium MED-G29 | 1 |
| Bacteria | Anoxybacillus kamchatkensis G10 | 1 |
| Bacteria | Staphylococcus piscifermentans | 4 |
| Bacteria | Variovorax guangxiensis | 1 |
| Bacteria | Staphylococcus sp. HMSC13A10 | 2 |
| Bacteria | Lactococcus lactis | 3 |
| Bacteria | Geobacter sulfurreducens | 1 |
| Bacteria | Planctomycetes bacterium RIFCSPHIGHO2_12_FULL_52_36 | 1 |
| Bacteria | [Clostridium] bolteae 90B8 | 4 |
| Environmental samples | compost metagenome | 16 |
| Bacteria | Cupriavidus basilensis OR16 | 1 |
| Bacteria | Escherichia coli KTE112 | 2 |
| Bacteria | Sodalis praecaptivus | 13 |
| Bacteria | Planctomycetes bacterium RIFCSPLOWO2_02_FULL_50_16 | 1 |
| Bacteria | Xenorhabdus kozodoii | 1 |
| Bacteria | Rhizobium sp. CF080 | 2 |
| Bacteria | Drancourtella sp. An57 | 3 |
| Bacteria | Micrococcales bacterium 70-64 | 2 |
| Bacteria | Pseudomonas sp. TAD18 | 2 |
| Bacteria | Eubacterium callanderi | 5 |
| Bacteria | Candidatus Omnitrophus magneticus | 4 |
| Bacteria | Gibbsiella quercinecans | 15 |
| Bacteria | Novibacillus thermophilus | 7 |
| Bacteria | Leptotrichia wadei | 1 |
| Bacteria | Yoonia vestfoldensis | 1 |
| Bacteria | Microbacterium sp. cl127 | 1 |
| Bacteria | Nocardioides currus | 2 |
| Bacteria | Altererythrobacter epoxidivorans | 1 |
| Bacteria | Enterococcus sp. 7F3_DIV0205 | 10 |
| Bacteria | Chlorobi bacterium OLB7 | 1 |
| Bacteria | Escherichia coli 042 | 3 |
| Bacteria | Vibrio sp. T21 | 2 |
| Bacteria | Dolosicoccus paucivorans | 4 |
| Bacteria | Streptomyces sp. ZEA17I | 1 |
| Bacteria | Pseudomonas syringae pv. cerasicola | 1 |
| Bacteria | bacterium 1XD8-76 | 4 |
| Bacteria | Bacillus swezeyi | 7 |
| Bacteria | Anoxybacillus gonensis | 4 |
| Bacteria | Anaerolineae bacterium SM23_ 63 | 1 |
| Bacteria | Chlorobium limicola DSM 245 | 2 |
| Bacteria | Klebsiella pneumoniae 30684/NJST258_2 | 9 |
| Bacteria | Arthrobacter psychrochitiniphilus | 2 |
| Bacteria | Acinetobacter nectaris CIP 110549 | 2 |
| Bacteria | Aminobacter sp. Root100 | 2 |
| Bacteria | Alteromonas macleodii | 1 |
| Bacteria | Planctomycetia bacterium | 1 |
| Bacteria | Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) | 1 |
| Bacteria | Lysinimicrobium mangrovi | 1 |
| Bacteria | Nakamurella silvestris | 1 |
| Bacteria | Planctomycetes bacterium RBG_13_50_24 | 1 |
| Bacteria | Corynebacterium diphtheriae NCTC 13129 | 1 |
| Bacteria | Haloarcula sp. Atlit-120R | 1 |
| Bacteria | Yersinia enterocolitica subsp. palearctica Y11 | 4 |
| Bacteria | Gammaproteobacteria bacterium ESL0073 | 1 |
| Bacteria | Streptomyces sp. NRRL WC-3605 | 2 |
| Bacteria | Nitrosomonas communis | 3 |
| Bacteria | Leptospira mayottensis | 1 |
| Bacteria | Enterobacillus tribolii | 9 |
| Bacteria | Agrobacterium sp. | 1 |
| Bacteria | Clostridium taeniosporum | 4 |
| Bacteria | Halomonas daqiaonensis | 1 |
| Bacteria | bacterium BMS3Bbin12 | 1 |
| Bacteria | Neptuniibacter caesariensis | 2 |
| Bacteria | Rhodoferax sp. TH121 | 1 |
| Bacteria | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_32 | 2 |
| Bacteria | Butyrivibrio hungatei | 2 |
| Bacteria | Listeria weihenstephanensis FSL R9-0317 | 8 |
| Bacteria | Stenotrophomonas chelatiphaga | 1 |
| Bacteria | alpha proteobacterium Q-1 | 1 |
| Bacteria | Lactobacillus helsingborgensis | 3 |
| Bacteria | Vibrio ezurae NBRC 102218 | 2 |
| Bacteria | Hoeflea phototrophica DFL-43 | 1 |
| Bacteria | Sphingopyxis terrae subsp. ummariensis | 1 |
| Bacteria | Pseudoalteromonas phenolica | 1 |
| Bacteria | Clostridium botulinum A3 str. Loch Maree | 1 |
| Bacteria | SAR92 bacterium BACL26 MAG-121220-bin70 | 1 |
| Bacteria | Cellvibrionaceae bacterium | 1 |
| Bacteria | Ochrobactrum cytisi | 1 |
| Bacteria | Woeseia sp. | 1 |
| Bacteria | Catenibacterium mitsuokai DSM 15897 | 3 |
| Bacteria | endosymbiont of Galathealinum brachiosum | 1 |
| Bacteria | Phaeobacter sp. CECT 5382 | 1 |
| Bacteria | Geodermatophilus pulveris | 1 |
| Bacteria | Denitrovibrio acetiphilus DSM 12809 | 2 |
| Bacteria | Corynebacterium casei UCMA 3821 | 2 |
| Bacteria | Xanthomonadaceae bacterium SCN 69-320 | 1 |
| Bacteria | Pseudomonas lutea | 2 |
| Bacteria | Clostridium sp. AM42-4 | 3 |
| Bacteria | Pseudarthrobacter sulfonivorans | 3 |
| Bacteria | Firmicutes bacterium AM41-11 | 1 |
| Bacteria | Romboutsia lituseburensis DSM 797 | 2 |
| Bacteria | Streptococcus sanguinis SK408 | 1 |
| Bacteria | Vibrio sp. S234-5 | 2 |
| Bacteria | Nocardioides psychrotolerans | 1 |
| Bacteria | Dolosigranulum pigrum ATCC 51524 | 7 |
| Bacteria | Rhodopirellula europaea SH398 | 2 |
| Bacteria | Azotobacter chroococcum NCIMB 8003 | 2 |
| Bacteria | Enterococcus aquimarinus | 3 |
| Bacteria | Elusimicrobia bacterium CG11_big_fil_rev_8_21_14_0_20_64_6 | 4 |
| Bacteria | Mycoplasma ovipneumoniae 14811 | 2 |
| Bacteria | Bosea sp. TND4EK4 | 2 |
| Bacteria | Grimontia hollisae | 1 |
| Bacteria | Entomoplasma somnilux | 6 |
| Bacteria | Lysinibacillus xylanilyticus | 1 |
| Bacteria | Enterococcus sulfureus ATCC 49903 | 3 |
| Bacteria | Xenorhabdus budapestensis | 3 |
| Bacteria | Lactobacillus mixtipabuli | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_52_11b | 1 |
| Bacteria | Actinomyces denticolens | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 | 1 |
| Mammals | Mustela putorius furo | 13 |
| Bacteria | Burkholderiales bacterium YL45 | 1 |
| Bacteria | Spirochaetes bacterium GWF1_49_6 | 3 |
| Bacteria | Mesorhizobium alhagi CCNWXJ12-2 | 1 |
| Bacteria | Octadecabacter temperatus | 1 |
| Bacteria | Corynebacterium aurimucosum ATCC 700975 | 2 |
| Bacteria | Pleomorphomonas diazotrophica | 3 |
| Bacteria | Microbacterium sp. HM58-2 | 3 |
| Bacteria | Streptococcus pneumoniae PNI0446 | 6 |
| Bacteria | Paenibacillus sp. HGF7 | 2 |
| Bacteria | Escherichia albertii B156 | 1 |
| Bacteria | Sphingomonas guangdongensis | 1 |
| Bacteria | Oleiphilus sp. HI0069 | 1 |
| Bacteria | Alicyclobacillus acidoterrestris ATCC 49025 | 4 |
| Bacteria | Clostridium sp. AM48-13 | 1 |
| Bacteria | Serratia grimesii | 1 |
| Bacteria | Burkholderia sp. SJ98 | 1 |
| Bacteria | Bradyrhizobium sp. NFR13 | 1 |
| Bacteria | Glaciecola punicea ACAM 611 | 1 |
| Bacteria | Salipiger bermudensis HTCC2601 | 1 |
| Bacteria | Arthrobacter sp. Leaf69 | 3 |
| Bacteria | Xenorhabdus bovienii str. kraussei Becker Underwood | 2 |
| Bacteria | Nitrospinae bacterium | 4 |
| Bacteria | Streptomyces aurantiacus JA 4570 | 3 |
| Bacteria | Salipiger profundus | 1 |
| Bacteria | Corynebacterium atypicum | 2 |
| Bacteria | Clostridium sp. OM05-5BH | 1 |
| Bacteria | Burkholderia mallei | 1 |
| Bacteria | Paraburkholderia soli | 1 |
| Bacteria | Paenibacillus sp. 32O-W | 4 |
| Invertebrates | Glossina austeni | 1 |
| Bacteria | Microbulbifer thermotolerans | 1 |
| Bacteria | Aggregatibacter actinomycetemcomitans HK1651 | 2 |
| Vertebrates | Anas platyrhynchos | 1 |
| Bacteria | Lactobacillus ceti DSM 22408 | 1 |
| Bacteria | Massilimicrobiota sp. An142 | 1 |
| Bacteria | Glutamicibacter soli | 1 |
| Bacteria | Ventosimonas gracilis | 1 |
| Bacteria | Polynucleobacter necessarius STIR1 | 1 |
| Invertebrates | Trichinella patagoniensis | 11 |
| Bacteria | Desulfuromonas sp. SDB | 9 |
| Bacteria | Rhizobium sp. PP-WC-1G-195 | 1 |
| Bacteria | Sphingomonas sp. Leaf34 | 1 |
| Bacteria | Rhodospira trueperi | 1 |
| Bacteria | Treponema berlinense | 4 |
| Bacteria | Pelagibacterium luteolum | 1 |
| Bacteria | Thermoanaerobacter thermohydrosulfuricus | 3 |
| Bacteria | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 | 3 |
| Bacteria | Streptococcus sp. I-G2 | 2 |
| Bacteria | Nitrobacter hamburgensis X14 | 1 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13 | 1 |
| Invertebrates | Phlebotomus papatasi | 3 |
| Bacteria | Serratia symbiotica | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Altona | 3 |
| Bacteria | Elusimicrobia bacterium RBG_16_66_12 | 3 |
| Bacteria | Desulfuromusa kysingii | 2 |
| Bacteria | Providencia alcalifaciens | 1 |
| Bacteria | Humibacter sp. BT305 | 1 |
| Bacteria | Variovorax sp. YR750 | 1 |
| Bacteria | Lactobacillus coleohominis DSM 14060 | 3 |
| Bacteria | Klenkia marina | 2 |
| Bacteria | Burkholderia multivorans | 2 |
| Bacteria | Fulvimarina pelagi HTCC2506 | 1 |
| Bacteria | Planctomycetales bacterium 4572_13 | 5 |
| Bacteria | Streptomyces sp. AS58 | 2 |
| Bacteria | Shigella flexneri 2a | 7 |
| Bacteria | Streptomyces harbinensis | 2 |
| Bacteria | Psychrilyobacter sp. S5 | 10 |
| Bacteria | Halogranum amylolyticum | 1 |
| Bacteria | Dechloromonas denitrificans | 2 |
| Bacteria | Bacillus beveridgei | 8 |
| Bacteria | Lactobacillus manihotivorans DSM 13343 = JCM 12514 | 8 |
| Bacteria | Streptomyces sp. PBH53 | 2 |
| Bacteria | Photobacterium phosphoreum ANT-2200 | 4 |
| Bacteria | Ignavibacteria bacterium CG_4_10_14_3_um_filter_37_18 | 2 |
| Bacteria | Brevundimonas sp. Root1423 | 1 |
| Bacteria | Arthrobacter sp. D4 | 3 |
| Bacteria | Pandoraea thiooxydans | 1 |
| Bacteria | Atopobium deltae | 5 |
| Bacteria | Pelagimonas varians | 1 |
| Bacteria | Shigella dysenteriae WRSd3 | 5 |
| Bacteria | Salinibacter ruber DSM 13855 | 2 |
| Bacteria | Candidatus Wallbacteria bacterium | 2 |
| Bacteria | Candidatus Omnitrophica bacterium CG_4_10_14_0_2_um_filter_44_9 | 1 |
| Bacteria | Proteobacteria bacterium CG1_02_64_396 | 1 |
| Bacteria | Roseovarius marisflavi | 1 |
| Bacteria | Idiomarina planktonica | 1 |
| Bacteria | Aquabacterium sp. NJ1 | 1 |
| Bacteria | Andreprevotia lacus DSM 23236 | 1 |
| Bacteria | Idiomarina salinarum | 1 |
| Environmental samples | Eubacterium sp. CAG:786 | 1 |
| Bacteria | Bradyrhizobium sp. NAS96.2 | 1 |
| Bacteria | Corynebacterium ureicelerivorans | 1 |
| Bacteria | Thermosulfurimonas dismutans | 1 |
| Bacteria | Mycolicibacterium peregrinum | 1 |
| Invertebrates | Elysia chlorotica | 4 |
| Bacteria | Mycolicibacterium iranicum | 1 |
| Bacteria | Waddlia chondrophila WSU 86-1044 | 2 |
| Bacteria | Marinomonas sp. | 1 |
| Bacteria | Sanguibacter soli | 1 |
| Bacteria | candidate division BRC1 bacterium ADurb.BinA364 | 3 |
| Bacteria | Streptomyces purpurogeneiscleroticus | 1 |
| Bacteria | Halobellus limi | 1 |
| Bacteria | [Eubacterium] rectale | 3 |
| Bacteria | Lentisphaerae bacterium | 2 |
| Bacteria | Novosphingobium resinovorum | 2 |
| Bacteria | Xanthomonas sp. ISO98C4 | 2 |
| Bacteria | Serratia rubidaea | 1 |
| Bacteria | Neisseria shayeganii 871 | 1 |
| Bacteria | Bellilinea caldifistulae | 2 |
| Bacteria | Microbacterium sp. CGR2 | 2 |
| Bacteria | Bifidobacterium bifidum IPLA 20015 | 1 |
| Bacteria | Colwellia marinimaniae | 1 |
| Bacteria | Streptomyces zinciresistens K42 | 2 |
| Bacteria | Alcanivorax sp. N3-2A | 1 |
| Bacteria | Frigoribacterium sp. PhB160 | 4 |
| Bacteria | Pleionea mediterranea | 1 |
| Bacteria | Rhodobacter sp. BACL10 MAG-120910-bin24 | 1 |
| Bacteria | Klebsiella aerogenes KCTC 2190 | 7 |
| Bacteria | Corynebacterium striatum ATCC 6940 | 2 |
| Bacteria | Euryarchaeota archaeon | 1 |
| Bacteria | Paenibacillus glucanolyticus | 1 |
| Bacteria | Pontibacillus chungwhensis BH030062 | 2 |
| Bacteria | Curtobacterium sp. MCBA15_009 | 1 |
| Bacteria | Mycoplasma genitalium G37 | 1 |
| Bacteria | Streptomyces sp. MUSC 1 | 2 |
| Bacteria | Eubacterium coprostanoligenes | 1 |
| Bacteria | Phormidium tenue NIES-30 | 1 |
| Bacteria | Mesorhizobium waimense | 1 |
| Bacteria | Treponema phagedenis | 4 |
| Bacteria | Vibrio barjaei | 1 |
| Bacteria | Methylobacterium organophilum | 1 |
| Bacteria | Chlamydia ibidis | 2 |
| Bacteria | Cellvibrio sp. PSBB006 | 1 |
| Bacteria | Collimonas fungivorans Ter331 | 1 |
| Bacteria | SAR86 cluster bacterium | 3 |
| Bacteria | Streptomyces autolyticus | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | 4 |
| Bacteria | Serpentinomonas raichei | 1 |
| Bacteria | 'Candidatus Kapabacteria' thiocyanatum | 1 |
| Bacteria | Caballeronia mineralivorans PML1(12) | 2 |
| Bacteria | Microbacterium sp. LEMMJ01 | 1 |
| Bacteria | Gemella haemolysans ATCC 10379 | 1 |
| Bacteria | Streptomyces sp. CB03911 | 1 |
| Bacteria | Haemophilus parahaemolyticus | 2 |
| Bacteria | Anaerovibrio sp. JC8 | 1 |
| Bacteria | Grimontella sp. AG753 | 1 |
| Bacteria | Candidatus Dadabacteria bacterium CSP1-2 | 2 |
| Bacteria | Comamonadaceae bacterium CG2_30_57_122 | 1 |
| Bacteria | Janthinobacterium sp. KBS0711 | 1 |
| Bacteria | Dichelobacter nodosus VCS1703A | 1 |
| Bacteria | Escherichia albertii | 3 |
| Bacteria | Maribius salinus | 1 |
| Bacteria | Streptococcus equi subsp. zooepidemicus MGCS10565 | 2 |
| Bacteria | Vibrio spartinae | 9 |
| Bacteria | Methylobacterium sp. 17SD2-17 | 2 |
| Bacteria | Streptococcus sanguinis SK72 | 1 |
| Bacteria | Agarivorans albus MKT 106 | 3 |
| Bacteria | Acidobacteria bacterium RBG_13_68_16 | 2 |
| Bacteria | Leptospira macculloughii | 1 |
| Bacteria | Clostridium intestinale DSM 6191 | 2 |
| Bacteria | Vibrio mytili | 1 |
| Bacteria | Enterococcus faecalis V583 | 9 |
| Bacteria | Rhizobiales bacterium 65-79 | 1 |
| Bacteria | Haemophilus influenzae HK1212 | 1 |
| Invertebrates | Trachymyrmex cornetzi | 2 |
| Bacteria | Cryobacterium sp. MLB-32 | 2 |
| Bacteria | Dorea sp. 5-2 | 3 |
| Bacteria | Desulfuromonadales bacterium GWD2_61_12 | 3 |
| Bacteria | Enterococcus villorum | 1 |
| Bacteria | Microbacterium sp. TS-1 | 4 |
| Bacteria | Chlorobium chlorochromatii CaD3 | 1 |
| Bacteria | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 2 |
| Bacteria | Idiomarina woesei | 1 |
| Bacteria | Butyrivibrio fibrisolvens DSM 3071 | 1 |
| Bacteria | Microbacterium sp. 67-17 | 3 |
| Bacteria | Streptomyces antibioticus | 1 |
| Bacteria | Alloiococcus otitis ATCC 51267 | 3 |
| Bacteria | Glaesserella parasuis SH0165 | 2 |
| Bacteria | Arthrobacter sp. MYb227 | 1 |
| Bacteria | Tateyamaria omphalii | 1 |
| Bacteria | Lactobacillus amylolyticus DSM 11664 | 3 |
| Bacteria | Salinisphaera hydrothermalis C41B8 | 2 |
| Bacteria | Bacillus sp. CHD6a | 2 |
| Bacteria | Alcaligenes faecalis subsp. faecalis | 1 |
| Bacteria | Thiothrix nivea DSM 5205 | 1 |
| Bacteria | Pseudomonas sp. TCU-HL1 | 2 |
| Bacteria | Thermophagus xiamenensis | 1 |
| Bacteria | Escherichia coli M056 | 2 |
| Bacteria | Clostridium botulinum A str. Hall | 3 |
| Bacteria | Undibacterium parvum | 1 |
| Bacteria | Hyphomonas jannaschiana VP2 | 1 |
| Bacteria | Thermosulfidibacter takaii ABI70S6 | 1 |
| Bacteria | Fibrobacter sp. UWH4 | 1 |
| Bacteria | Lachnospiraceae bacterium KHCPX20 | 1 |
| Bacteria | Corynebacterium matruchotii ATCC 14266 | 1 |
| Bacteria | Carnobacterium divergens DSM 20623 | 2 |
| Bacteria | candidate division Zixibacteria bacterium RBG_16_53_22 | 2 |
| Bacteria | Planomonospora sphaerica | 1 |
| Bacteria | Salmonella enterica subsp. houtenae | 2 |
| Invertebrates | Fasciola hepatica | 4 |
| Bacteria | Atopobium rimae ATCC 49626 | 4 |
| Bacteria | Luteimonas sp. 100111 | 1 |
| Bacteria | Aureimonas sp. Leaf324 | 1 |
| Bacteria | Megasphaera sp. An286 | 2 |
| Bacteria | Raoultella terrigena | 2 |
| Bacteria | Agrococcus jenensis | 3 |
| Bacteria | Agromyces aureus | 1 |
| Bacteria | Brevibacillus laterosporus GI-9 | 4 |
| Bacteria | Candidatus Hydrogenedentes bacterium ADurb.Bin101 | 1 |
| Bacteria | Parvularcula bermudensis HTCC2503 | 1 |
| Bacteria | Azospirillum humicireducens | 1 |
| Bacteria | Planctomicrobium piriforme | 4 |
| Invertebrates | Trichomalopsis sarcophagae | 2 |
| Bacteria | Natronococcus jeotgali DSM 18795 | 1 |
| Bacteria | Streptococcus mutans SM6 | 4 |
| Bacteria | Cutibacterium acnes JCM 18909 | 1 |
| Bacteria | Collinsella sp. An268 | 1 |
| Bacteria | Anaeromassilibacillus sp. An250 | 2 |
| Bacteria | Alphaproteobacteria bacterium TMED87 | 1 |
| Bacteria | Epibacterium ulvae | 1 |
| Bacteria | Stenotrophomonas acidaminiphila | 2 |
| Bacteria | Halanaerobium sp. MDAL1 | 3 |
| Bacteria | bacterium HR40 | 1 |
| Bacteria | Aureimonas jatrophae | 2 |
| Bacteria | Pseudomonas sp. 58 R 3 | 1 |
| Bacteria | Desulfobacter hydrogenophilus | 4 |
| Bacteria | Brevibacillus gelatini | 4 |
| Bacteria | delta proteobacterium MLMS-1 | 1 |
| Bacteria | Pararhodobacter aggregans | 1 |
| Bacteria | Streptomyces gancidicus BKS 13-15 | 2 |
| Bacteria | Anaerobacillus arseniciselenatis | 1 |
| Bacteria | Deltaproteobacteria bacterium ADurb.Bin002 | 1 |
| Bacteria | gamma proteobacterium NOR5-3 | 1 |
| Bacteria | Afipia sp. | 1 |
| Bacteria | candidate division KSB1 bacterium | 3 |
| Bacteria | Spiribacter salinus M19-40 | 1 |
| Bacteria | Brachybacterium alimentarium | 4 |
| Bacteria | Jannaschia seosinensis | 1 |
| Invertebrates | Brachionus plicatilis | 6 |
| Bacteria | Pseudooceanicola batsensis HTCC2597 | 1 |
| Bacteria | Massilia psychrophila | 1 |
| Bacteria | Yoonia litorea | 1 |
| Bacteria | Entomoplasma lucivorax | 6 |
| Bacteria | Escherichia coli O26 | 2 |
| Bacteria | Ignavibacteriae bacterium | 1 |
| Bacteria | Chloroflexi bacterium | 1 |
| Bacteria | Mycoplasma flocculare ATCC 27399 | 4 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFOXYA2_FULL_38_17 | 3 |
| Bacteria | Hephaestia caeni | 2 |
| Bacteria | Mycoplasma pneumoniae FH | 2 |
| Bacteria | Opitutales bacterium | 1 |
| Bacteria | Corynebacterium sp. HMSC074C01 | 1 |
| Bacteria | Elusimicrobia bacterium RIFOXYA2_FULL_50_26 | 1 |
| Bacteria | Sinorhizobium meliloti 1021 | 1 |
| Bacteria | Pseudoclavibacter sp. AY1H1 | 1 |
| Bacteria | Curtobacterium sp. Leaf183 | 3 |
| Bacteria | Bordetella pertussis 18323 | 1 |
| Bacteria | Streptacidiphilus jiangxiensis | 1 |
| Bacteria | Arboricoccus pini | 1 |
| Bacteria | Acetobacteraceae bacterium AT-5844 | 2 |
| Bacteria | Paraburkholderia sediminicola | 2 |
| Bacteria | Bacillus sp. JCM 19047 | 3 |
| Bacteria | Paracoccus bengalensis | 1 |
| Bacteria | Acidocella sp. MX-AZ02 | 1 |
| Bacteria | Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 | 1 |
| Bacteria | Curtobacterium sp. UNCCL20 | 1 |
| Bacteria | Arenitalea lutea | 1 |
| Bacteria | Agrobacterium sp. DSM 25559 | 1 |
| Bacteria | Fibrobacter sp. UWB4 | 1 |
| Bacteria | Amphiplicatus metriothermophilus | 1 |
| Bacteria | Halopelagius longus | 1 |
| Bacteria | Mycoplasma columborale | 1 |
| Bacteria | Pseudobutyrivibrio sp. AR14 | 1 |
| Bacteria | Rhodococcus sp. 2G | 1 |
| Bacteria | Corynebacterium pseudotuberculosis | 1 |
| Invertebrates | Ascaris suum | 1 |
| Bacteria | Bacillus boroniphilus JCM 21738 | 1 |
| Bacteria | Lactobacillus iners DSM 13335 | 2 |
| Bacteria | Corynebacterium variabile | 1 |
| Bacteria | Bacteroidetes bacterium HLUCCA01 | 2 |
| Bacteria | Amphritea balenae | 1 |
| Bacteria | Halorhodospira halophila SL1 | 1 |
| Bacteria | Sphaerochaeta sp. | 4 |
| Bacteria | Roseibacterium elongatum DSM 19469 | 1 |
| Bacteria | Ketogulonicigenium robustum | 1 |
| Bacteria | Gammaproteobacteria bacterium SG8_11 | 1 |
| Bacteria | Omnitrophica bacterium RIFCSPLOWO2_02_FULL_45_16 | 3 |
| Bacteria | Candidatus Contendobacter odensis | 1 |
| Bacteria | Bradyrhizobium lupini HPC(L) | 1 |
| Bacteria | Candidatus Berkiella cookevillensis | 1 |
| Bacteria | Bacillus horneckiae | 1 |
| Bacteria | Bifidobacterium bifidum BGN4 | 1 |
| Bacteria | Paeniclostridium sordellii | 3 |
| Bacteria | Aliiroseovarius pelagivivens | 1 |
| Bacteria | Sphingomonas sp. Ant20 | 1 |
| Bacteria | Caloramator fervidus | 1 |
| Bacteria | Devosia geojensis | 1 |
| Bacteria | Escherichia coli DORA_A_5_14_21 | 2 |
| Bacteria | Fibrobacter sp. UWT1 | 1 |
| Bacteria | Oleiphilus sp. HI0065 | 1 |
| Bacteria | Roseovarius mucosus DSM 17069 | 1 |
| Bacteria | Modestobacter versicolor | 1 |
| Bacteria | [Clostridium] clostridioforme 90A6 | 3 |
| Bacteria | Ochrobactrum intermedium M86 | 1 |
| Bacteria | Candidatus Thiodiazotropha endolucinida | 1 |
| Bacteria | Gallionellales bacterium GWA2_59_43 | 1 |
| Bacteria | Streptomyces viridosporus ATCC 14672 | 1 |
| Bacteria | Burkholderia stabilis | 1 |
| Bacteria | Mesorhizobium sp. BD68 | 1 |
| Bacteria | Ignavibacteria bacterium RIFOXYB2_FULL_36_7 | 1 |
| Bacteria | Verrucomicrobiae bacterium AMD-G2 | 1 |
| Bacteria | Actinomadura meyerae | 2 |
| Bacteria | Nocardioides sp. WSJ-1 | 2 |
| Bacteria | Bacillus sp. AFS019443 | 1 |
| Bacteria | Pusillimonas sp. T2 | 1 |
| Bacteria | Escherichia coli APEC O1 | 1 |
| Bacteria | Chromobacterium sp. MWU13-2610 | 1 |
| Bacteria | Burkholderia sp. CCGE1003 | 1 |
| Bacteria | Rhodopirellula sallentina SM41 | 1 |
| Bacteria | Pasteurella multocida subsp. multocida OH4807 | 2 |
| Bacteria | Planctomycetes bacterium RIFOXYB12_FULL_42_10 | 1 |
| Bacteria | Sulfuricella sp. T08 | 1 |
| Bacteria | Clostridium sp. TF08-15 | 1 |
| Bacteria | Pseudomonas nitroreducens | 2 |
| Bacteria | Stenotrophomonas sp. SKA14 | 1 |
| Bacteria | Elusimicrobia bacterium RIFOXYA12_FULL_49_49 | 1 |
| Bacteria | Kocuria sp. OV113 | 1 |
| Bacteria | Caballeronia calidae | 1 |
| Bacteria | Rhodoferax saidenbachensis | 1 |
| Bacteria | Allochromatium warmingii | 1 |
| Bacteria | Veillonella sp. AF42-16 | 1 |
| Bacteria | Corynebacterium humireducens NBRC 106098 = DSM 45392 | 1 |
| Bacteria | Desulfobacter postgatei | 1 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_66_14 | 1 |
| Bacteria | bacterium (Candidatus Ratteibacteria) CG_4_10_14_3_um_filter_41_18 | 2 |
| Bacteria | Lactobacillus salivarius GJ-24 | 1 |
| Bacteria | Rhodospirillaceae bacterium BRH_c57 | 1 |
| Bacteria | Thermaerobacter marianensis DSM 12885 | 2 |
| Bacteria | Rhodobacteraceae bacterium HLUCCA12 | 1 |
| Bacteria | Halanaerobium saccharolyticum | 1 |
| Bacteria | Rhizobium sp. NFR07 | 2 |
| Bacteria | Devosia sp. Root685 | 1 |
| Bacteria | Clostridium sp. OM05-6BH | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.12.2.1 | 1 |
| Bacteria | Tamilnaduibacter salinus | 1 |
| Bacteria | Candidatus Latescibacteria bacterium 4484_107 | 2 |
| Bacteria | Lactobacillus jensenii 269-3 | 1 |
| Bacteria | Leifsonia sp. Leaf325 | 1 |
| Bacteria | Streptomyces sp. FXJ1.172 | 2 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_45_21 | 1 |
| Bacteria | Subdoligranulum sp. 60_17 | 3 |
| Bacteria | Cupriavidus sp. HPC(L) | 1 |
| Bacteria | Alkalitalea saponilacus | 1 |
| Bacteria | Brevundimonas sp. SH203 | 1 |
| Bacteria | Asticcacaulis excentricus CB 48 | 1 |
| Bacteria | Pseudorhodoplanes sinuspersici | 2 |
| Bacteria | Parendozoicomonas haliclonae | 2 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_53_10 | 2 |
| Bacteria | Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 | 1 |
| Bacteria | Alteromonas sp. KS69 | 1 |
| Bacteria | Arthrobacter sp. ZBG10 | 2 |
| Bacteria | Sphingomonas sp. Leaf38 | 1 |
| Bacteria | Pelagibacteraceae bacterium TMED195 | 1 |
| Bacteria | Viridibacillus arvi | 2 |
| Bacteria | Rhodobacteraceae bacterium 63075 | 1 |
| Bacteria | Betaproteobacteria bacterium RBG_16_66_20 | 1 |
| Bacteria | Blautia obeum A2-162 | 1 |
| Bacteria | Ignavibacteriales bacterium CG18_big_fil_WC_8_21_14_2_50_31_20 | 3 |
| Bacteria | Herbaspirillum hiltneri N3 | 1 |
| Bacteria | Corynebacterium geronticis | 2 |
| Bacteria | Clostridium botulinum | 3 |
| Bacteria | Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 | 1 |
| Bacteria | Candidatus Aquiluna sp. IMCC13023 | 2 |
| Bacteria | Lactobacillus helveticus | 2 |
| Bacteria | Streptomyces sp. NRRL F-4489 | 1 |
| Bacteria | Beijerinckia indica subsp. indica ATCC 9039 | 1 |
| Bacteria | Holdemania filiformis | 2 |
| Bacteria | Dorea longicatena | 2 |
| Bacteria | Psychromonas sp. PRT-SC03 | 2 |
| Bacteria | Pseudomonas syringae pv. atrofaciens | 1 |
| Bacteria | Consotaella salsifontis | 1 |
| Bacteria | Alphaproteobacteria bacterium 13_1_20CM_3_64_12 | 1 |
| Bacteria | Streptomyces sp. Ag82_G5-5 | 1 |
| Bacteria | Lysobacter sp. Root604 | 1 |
| Bacteria | Bradyrhizobium sp. ORS 278 | 1 |
| Bacteria | Bacillus pseudomycoides | 2 |
| Bacteria | Desulfococcus sp. 4484_242 | 1 |
| Bacteria | Dissulfuribacter thermophilus | 1 |
| Bacteria | Aliiroseovarius sediminilitoris | 1 |
| Bacteria | Clostridium sp. AF34-10BH | 1 |
| Bacteria | Candidatus Berkiella aquae | 1 |
| Bacteria | Aeromonas sp. RU34C | 3 |
| Invertebrates | Heterorhabditis bacteriophora | 2 |
| Bacteria | Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1 | 1 |
| Bacteria | Neisseria sp. HMSC070A01 | 1 |
| Bacteria | Pseudomonas sp. TTU2014-080ASC | 1 |
| Bacteria | Bosea sp. RAC05 | 1 |
| Bacteria | Streptococcus equi subsp. zooepidemicus CY | 1 |
| Bacteria | Thiobacillus sp. SCN 63-57 | 1 |
| Bacteria | Deltaproteobacteria bacterium GWC2_65_14 | 1 |
| Bacteria | Novosphingobium malaysiense | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_50_5 | 1 |
| Bacteria | Caldithrix abyssi DSM 13497 | 2 |
| Bacteria | Plantactinospora sp. CNZ320 | 1 |
| Bacteria | Rheinheimera salexigens | 1 |
| Invertebrates | Amblyomma sculptum | 1 |
| Bacteria | Actinoplanes utahensis | 1 |
| Bacteria | Gemmatimonadetes bacterium 13_1_40CM_4_69_5 | 2 |
| Bacteria | Taylorella equigenitalis 14/56 | 1 |
| Bacteria | Deltaproteobacteria bacterium GWD2_55_8 | 1 |
| Bacteria | Escherichia coli TA447 | 2 |
| Bacteria | Luteimonas sp. FCS-9 | 1 |
| Bacteria | Rhodovulum sp. | 2 |
| Bacteria | Isoptericola variabilis | 1 |
| Bacteria | Cereibacter changlensis | 1 |
| Bacteria | Collinsella intestinalis DSM 13280 | 1 |
| Bacteria | Thioploca ingrica | 1 |
| Bacteria | Gemmobacter sp. | 1 |
| Bacteria | Roseivivax lentus | 1 |
| Bacteria | Pseudomonas sp. ZYSR67-Z | 1 |
| Bacteria | Endozoicomonas elysicola | 1 |
| Bacteria | Natronoarchaeum philippinense | 1 |
| Bacteria | Vibrio europaeus | 1 |
| Bacteria | Actinomadura parvosata subsp. kistnae | 1 |
| Bacteria | Umboniibacter marinipuniceus | 1 |
| Bacteria | Aurantimonas sp. Leaf443 | 1 |
| Bacteria | Shewanella sp. TH2012 | 1 |
| Bacteria | Streptomyces sp. PRh5 | 1 |
| Bacteria | Paenibacillus sp. P46E | 2 |
| Bacteria | Marinimicrobia bacterium 46_43 | 3 |
| Bacteria | Brucella melitensis | 1 |
| Bacteria | Elusimicrobia bacterium GWB2_63_22 | 2 |
| Bacteria | Lysobacter sp. WF-2 | 1 |
| Bacteria | Roseovarius sp. 22II1-1F6A | 1 |
| Bacteria | Citrobacter sp. MGH105 | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 | 2 |
| Bacteria | Kocuria sp. HSID16901 | 3 |
| Bacteria | Arthrobacter sp. HMWF013 | 1 |
| Bacteria | Zhouia amylolytica AD3 | 1 |
| Bacteria | Acholeplasma laidlawii | 1 |
| Bacteria | Defluviimonas sp. 20V17 | 1 |
| Bacteria | Comamonadaceae bacterium CG2_30_59_20 | 1 |
| Bacteria | Clostridium sporogenes ATCC 15579 | 1 |
| Bacteria | Lactobacillus ruminis ATCC 27782 | 1 |
| Bacteria | Rhodocyclales bacterium GWA2_65_19 | 1 |
| Bacteria | Mycolicibacterium diernhoferi | 2 |
| Bacteria | Pseudoalteromonas luteoviolacea 2ta16 | 1 |
| Bacteria | Erythrobacter sp. AP23 | 1 |
| Bacteria | Rhodobacter sphaeroides 2.4.1 | 2 |
| Bacteria | Thermostaphylospora chromogena | 1 |
| Bacteria | Sphingobium amiense | 1 |
| Bacteria | Nitrosomonas eutropha | 1 |
| Bacteria | Streptomyces sp. PT12 | 1 |
| Bacteria | Rhodococcus opacus B4 | 1 |
| Bacteria | Halopiger salifodinae | 1 |
| Bacteria | Streptomyces griseus | 1 |
| Bacteria | Lactobacillus casei BL23 | 1 |
| Bacteria | Neisseria gonorrhoeae NG-k51.05 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.004.04.2.1 | 1 |
| Bacteria | Citromicrobium sp. RCC1897 | 1 |
| Bacteria | Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_54_10 | 1 |
| Bacteria | Brachybacterium sp. UMB0905 | 1 |
| Bacteria | Streptococcus pneumoniae JJA | 3 |
| Rodents | Cynomys ludovicianus | 2 |
| Bacteria | Clostridium sp. AM18-55 | 1 |
| Bacteria | Enterococcus casseliflavus ATCC 49996 | 1 |
| Bacteria | Streptomyces sp. CB02366 | 1 |
| Bacteria | Fusobacterium nucleatum subsp. nucleatum ATCC 23726 | 1 |
| Bacteria | Brucella suis | 1 |
| Bacteria | [Polyangium] brachysporum | 1 |
| Bacteria | Hyphomicrobium denitrificans ATCC 51888 | 1 |
| Bacteria | Vibrio owensii | 1 |
| Environmental samples | uncultured bacterium Contig982 | 1 |
| Bacteria | Pseudoalteromonas luteoviolacea S4054 | 1 |
| Bacteria | Thermobacillus composti KWC4 | 1 |
| Bacteria | Geodermatophilus sp. DSM 45219 | 1 |
| Bacteria | Halanaerobium praevalens DSM 2228 | 2 |
| Bacteria | Neisseria gonorrhoeae FA 1090 | 1 |
| Bacteria | Enterobacter cancerogenus | 1 |
| Bacteria | Rhodobacteraceae bacterium HLUCCA08 | 1 |
| Bacteria | Paenibacillus kribbensis | 1 |
| Bacteria | Undibacterium pigrum | 2 |
| Bacteria | Halomonas sp. SF2003 | 1 |
| Bacteria | Bradyrhizobium elkanii | 1 |
| Bacteria | Streptomyces sp. DSM 15324 | 1 |
| Bacteria | Clostridium sp. 26_22 | 1 |
| Bacteria | Chlorobaculum parvum NCIB 8327 | 1 |
| Bacteria | Aliidiomarina maris | 1 |
| Bacteria | Flavobacteria bacterium MS024-2A | 1 |
| Bacteria | Halothiobacillus sp. LS2 | 1 |
| Bacteria | Atopobium sp. ICM42b | 2 |
| Bacteria | Streptomyces sp. Z022 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.03.1.1 | 1 |
| Bacteria | Luminiphilus syltensis NOR5-1B | 1 |
| Bacteria | Asticcacaulis sp. AC402 | 1 |
| Bacteria | Chloroflexi bacterium 13_1_40CM_2_68_14 | 1 |
| Bacteria | Nisaea sp. | 1 |
| Bacteria | Actinoplanes awajinensis subsp. mycoplanecinus | 1 |
| Bacteria | Desulfuromonadales bacterium C00003096 | 1 |
| Bacteria | Pasteurella canis | 1 |
| Bacteria | Actinobaculum sp. oral taxon 183 str. F0552 | 1 |
| Bacteria | Porphyrobacter sp. TH134 | 1 |
| Bacteria | Serinibacter salmoneus | 1 |
| Bacteria | Fontimonas thermophila | 1 |
| Bacteria | Variovorax sp. CF079 | 1 |
| Bacteria | Thalassospira profundimaris WP0211 | 1 |
| Bacteria | Ruminococcaceae bacterium D5 | 1 |
| Invertebrates | Anopheles aquasalis | 1 |
| Bacteria | Streptomyces platensis | 2 |
| Bacteria | Burkholderia multivorans CGD1 | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG1_02_46_14 | 1 |
| Bacteria | Enterococcus faecalis ERV25 | 2 |
| Bacteria | Methylobacterium sp. SCN 67-24 | 1 |
| Bacteria | Marinobacter sp. ES-1 | 1 |
| Bacteria | Enterobacter mori | 1 |
| Bacteria | Clostridium sp. AF36-18BH | 1 |
| Primates | Plecturocebus moloch | 1 |
| Bacteria | Hirschia baltica ATCC 49814 | 1 |
| Bacteria | Thermanaerovibrio velox DSM 12556 | 4 |
| Bacteria | Syntrophaceae bacterium PtaU1.Bin231 | 1 |
| Bacteria | Azospirillum oryzae | 1 |
| Bacteria | Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 | 1 |
| Bacteria | Ochrobactrum sp. 27A/999/2015 | 1 |
| Bacteria | Sunxiuqinia elliptica | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_52_11 | 2 |
| Bacteria | Clostridium sp. AF18-27 | 1 |
| Vertebrates | Eurypyga helias | 2 |
| Bacteria | Neisseria mucosa | 1 |
| Bacteria | Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 | 1 |
| Bacteria | Streptomyces natalensis ATCC 27448 | 1 |
| Bacteria | Desulfovibrio gigas DSM 1382 = ATCC 19364 | 1 |
| Bacteria | Roseobacter denitrificans OCh 114 | 1 |
| Bacteria | Taylorella equigenitalis MCE9 | 1 |
| Bacteria | Pseudosporangium ferrugineum | 1 |
| Bacteria | Enterococcus sp. FDAARGOS_375 | 1 |
| Bacteria | Caballeronia humi | 1 |
| Bacteria | Rhodobacteraceae bacterium EhC02 | 1 |
| Bacteria | Leptospira weilii str. 2006001855 | 1 |
| Environmental samples | Clostridium sp. CAG:343 | 1 |
| Bacteria | Lysobacter arseniciresistens ZS79 | 1 |
| Bacteria | Fibrobacter sp. UWB1 | 1 |
| Bacteria | Herminiimonas sp. KBW02 | 1 |
| Bacteria | Varibaculum cambriense DORA_20 | 1 |
| Bacteria | Bradyrhizobiaceae bacterium SG-6C | 1 |
| Bacteria | Lysobacter capsici | 1 |
| Bacteria | Vibrio pectenicida | 1 |
| Bacteria | Kandleria vitulina DSM 20405 | 1 |
| Environmental samples | Coraliomargarita sp. CAG:312 | 1 |
| Bacteria | Elusimicrobium minutum Pei191 | 1 |
| Bacteria | Defluviimonas denitrificans | 1 |
| Bacteria | Floricoccus penangensis | 1 |
| Bacteria | Zhongshania sp. DSW25-10 | 1 |
| Bacteria | Acetomicrobium hydrogeniformans ATCC BAA-1850 | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_47_10 | 1 |
| Bacteria | Clostridium sp. AM27-28 | 1 |
| Bacteria | Methylophaga muralis | 1 |
| Bacteria | Sphingomonas sp. WG | 1 |
| Invertebrates | Photinus pyralis | 1 |
| Bacteria | Labrenzia alba | 2 |
| Bacteria | Bacillus sp. WP8 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.004.12.1.1 | 1 |
| Bacteria | Streptomyces sp. XY006 | 2 |
| Bacteria | Lysinibacillus sp. ZYM-1 | 1 |
| Bacteria | beta proteobacterium MWH-P2sevCIIIb | 1 |
| Bacteria | Blautia sp. | 1 |
| Bacteria | Streptomyces sp. F-3 | 1 |
| Bacteria | Thermoanaerobacter sp. X514 | 1 |
| Bacteria | Pontibacillus halophilus JSM 076056 = DSM 19796 | 1 |
| Bacteria | Cupriavidus sp. OV038 | 1 |
| Bacteria | Streptococcus agalactiae FSL S3-277 | 1 |
| Bacteria | Microbacterium foliorum | 2 |
| Bacteria | Paracoccus mutanolyticus | 1 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 | 1 |
| Bacteria | [Clostridium] hylemonae DSM 15053 | 1 |
| Bacteria | Elusimicrobia bacterium RIFOXYB2_FULL_48_7 | 1 |
| Bacteria | Streptomyces sp. C | 1 |
| Bacteria | Alphaproteobacteria bacterium PA3 | 1 |
| Bacteria | Burkholderia sp. AD24 | 1 |
| Bacteria | Marinomonas sp. S3726 | 1 |
| Bacteria | Agrobacterium fabrum | 1 |
| Bacteria | Coprococcus catus GD/7 | 1 |
| Bacteria | Intestinibacter bartlettii DSM 16795 | 1 |
| Bacteria | Pseudomonas sp. URMO17WK12:I9 | 1 |
| Bacteria | Allofrancisella guangzhouensis | 1 |
| Bacteria | Jannaschia sp. EhC01 | 1 |
| Bacteria | Variovorax sp. PDC80 | 1 |
| Bacteria | Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_63_14 | 1 |
| Bacteria | Mycobacterium grossiae | 1 |
| Bacteria | Pseudomonas sp. K2W31S-8 | 1 |
| Bacteria | Comamonadaceae bacterium NML970147 | 1 |
| Bacteria | Paenibacillus antarcticus | 1 |
| Bacteria | Legionella quinlivanii | 1 |
| Bacteria | Acidobacteria bacterium ADurb.Bin051 | 1 |
| Bacteria | Lawsonella clevelandensis | 1 |
| Bacteria | Collimonas sp. PA-H2 | 1 |
| Bacteria | Sphingomonas hengshuiensis | 1 |
| Bacteria | Oceanicaulis sp. HLUCCA04 | 1 |
| Bacteria | Francisella tularensis subsp. novicida PA10-7858 | 1 |
| Bacteria | Flavobacteriaceae bacterium TMED68 | 1 |
| Bacteria | Mesorhizobium sp. Primo-B | 1 |
| Bacteria | Stenotrophomonas maltophilia RA8 | 1 |
| Bacteria | Zhongshania aliphaticivorans | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED95 | 1 |
| Bacteria | Marinobacter salarius | 1 |
| Bacteria | Pseudomonas sp. FW305-130 | 1 |
| Bacteria | Selenomonas sp. CM52 | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_50_16 | 1 |
| Bacteria | Afipia sp. GAS231 | 1 |
| Bacteria | [Eubacterium] rectale ATCC 33656 | 2 |
| Bacteria | Phaeobacter inhibens DSM 17395 | 1 |
| Bacteria | Bradyrhizobium diazoefficiens USDA 110 | 1 |
| Bacteria | Caulobacter sp. HMWF025 | 1 |
| Bacteria | Dorea formicigenerans | 1 |
| Bacteria | Chlorobium sp. 445 | 1 |
| Bacteria | Simonsiella muelleri ATCC 29453 | 1 |
| Bacteria | Ensifer adhaerens OV14 | 1 |
| Bacteria | Pseudomonas abyssi | 1 |
| Bacteria | Curtobacterium sp. Leaf154 | 1 |
| Bacteria | alpha proteobacterium U9-1i | 1 |
| Bacteria | Janthinobacterium sp. BJB426 | 1 |
| Bacteria | Lysinibacillus sp. F5 | 1 |
| Bacteria | Marinobacter daqiaonensis | 1 |
| Bacteria | Sphingopyxis sp. MG | 1 |
| Bacteria | Thioalkalivibrio denitrificans | 1 |
| Bacteria | Streptomyces sp. CB01883 | 1 |
| Bacteria | Clostridium homopropionicum DSM 5847 | 1 |
| Bacteria | Enterobacter asburiae LF7a | 3 |
| Vertebrates | Astyanax mexicanus | 39 |
| Bacteria | Candidatus Cloacimonas acidaminovorans str. Evry | 3 |
| Bacteria | Cutibacterium acnes JCM 18916 | 7 |
| Bacteria | Pediococcus acidilactici 7_4 | 5 |
| Bacteria | Roseateles aquatilis | 1 |
| Bacteria | Paenibacillus terrae | 5 |
| Bacteria | Pseudomonas sp. MF4836 | 3 |
| Bacteria | Myxococcales bacterium | 7 |
| Bacteria | Tolumonas auensis DSM 9187 | 8 |
| Bacteria | Amphibacillus marinus | 16 |
| Bacteria | Marinobacterium sp. AK27 | 1 |
| Bacteria | Streptomyces actuosus | 1 |
| Environmental samples | uncultured Mycobacterium sp. | 2 |
| Bacteria | Clostridium sp. ASBs410 | 9 |
| Bacteria | Pseudacidovorax intermedius | 2 |
| Bacteria | Lachnospiraceae bacterium AM10-38 | 9 |
| Bacteria | Listeria fleischmannii FSL S10-1203 | 9 |
| Bacteria | Bacillus gaemokensis | 1 |
| Bacteria | Verrucomicrobia bacterium ADurb.Bin063 | 3 |
| Bacteria | Paenibacillus sp. NFR01 | 3 |
| Bacteria | Bacillus wiedmannii bv. thuringiensis | 4 |
| Vertebrates | Micrurus lemniscatus lemniscatus | 3 |
| Bacteria | Providencia heimbachae ATCC 35613 | 6 |
| Bacteria | bacterium 1XD42-54 | 1 |
| Bacteria | Thiolapillus brandeum | 1 |
| Bacteria | Alphaproteobacteria bacterium TMED93 | 1 |
| Vertebrates | Takifugu rubripes | 16 |
| Bacteria | Escherichia coli B354 | 2 |
| Primates | Homo sapiens | 34 |
| Bacteria | Staphylococcus aureus | 37 |
| Bacteria | Stenotrophomonas maltophilia K279a | 2 |
| Bacteria | Polynucleobacter hirudinilacicola | 1 |
| Bacteria | Vibrio sp. V01_P9A10T6 | 2 |
| Bacteria | Enterococcus avium | 16 |
| Bacteria | Faecalibaculum rodentium | 14 |
| Bacteria | Janthinobacterium sp. Marseille | 2 |
| Bacteria | Clostridium sp. AF19-22AC | 2 |
| Bacteria | Pseudomonas sp. GV034 | 1 |
| Bacteria | Staphylococcus sp. HMSC068D05 | 1 |
| Bacteria | Staphylococcus edaphicus | 4 |
| Bacteria | Salmonella enterica subsp. enterica serovar Mbandaka | 4 |
| Bacteria | Mameliella alba | 1 |
| Bacteria | Lactobacillus satsumensis DSM 16230 = JCM 12392 | 13 |
| Bacteria | Ideonella sakaiensis | 3 |
| Mammals | Felis catus | 46 |
| Bacteria | Kushneria sp. YCWA18 | 2 |
| Bacteria | [Clostridium] clostridioforme | 21 |
| Bacteria | Bacteroides xylanolyticus | 4 |
| Environmental samples | Clostridium sp. CAG:354 | 1 |
| Bacteria | Mariniphaga sediminis | 1 |
| Bacteria | Bacillus licheniformis CG-B52 | 3 |
| Bacteria | Escherichia coli H420 | 4 |
| Bacteria | Citrobacter sp. 50677481 | 10 |
| Bacteria | Streptococcus pneumoniae D39 | 4 |
| Bacteria | Burkholderia sp. WP9 | 1 |
| Bacteria | Pseudomonas sp. p106 | 2 |
| Bacteria | Aeromonas veronii | 6 |
| Bacteria | Syntrophaceae bacterium PtaB.Bin095 | 1 |
| Invertebrates | Taenia asiatica | 3 |
| Environmental samples | Clostridium bartlettii CAG:1329 | 7 |
| Bacteria | Devosia sp. 67-54 | 1 |
| Bacteria | Deinococcus gobiensis I-0 | 2 |
| Bacteria | Rhodospirillaceae bacterium | 45 |
| Bacteria | Streptococcus pluranimalium | 11 |
| Bacteria | Microbispora rosea | 1 |
| Invertebrates | Drosophila mojavensis | 26 |
| Bacteria | Bacillus marisflavi | 14 |
| Bacteria | Pediococcus ethanolidurans | 11 |
| Bacteria | Clostridium sp. DL-VIII | 14 |
| Bacteria | Arthrobacter sp. MN05-02 | 3 |
| Bacteria | Rhodobacteraceae bacterium GWF1_65_7 | 1 |
| Bacteria | Blautia hydrogenotrophica | 3 |
| Bacteria | Chloroflexi bacterium RBG_13_68_17 | 1 |
| Bacteria | Mesorhizobium sp. LCM 4576 | 1 |
| Bacteria | Rhodobacteraceae bacterium TMED160 | 1 |
| Bacteria | Thermoanaerobacter thermocopriae | 1 |
| Bacteria | Desulfotignum phosphitoxidans DSM 13687 | 2 |
| Bacteria | Megamonas sp. Calf98-2 | 4 |
| Bacteria | Planctomycetes bacterium | 27 |
| Bacteria | Lactobacillus brantae DSM 23927 | 3 |
| Bacteria | Microbacterium sp. SCN 70-200 | 3 |
| Bacteria | Escherichia coli IAI39 | 5 |
| Vertebrates | Stegastes partitus | 33 |
| Bacteria | Rathayibacter toxicus | 3 |
| Bacteria | Enterococcus faecalis TX4248 | 12 |
| Bacteria | Vibrio renipiscarius | 6 |
| Bacteria | Erwinia tracheiphila | 5 |
| Bacteria | Ignavibacteria bacterium RBG_16_36_9 | 1 |
| Bacteria | Streptococcus porcinus | 14 |
| Bacteria | Salinicoccus halodurans | 10 |
| Bacteria | Escherichia coli HVH 50 (4-2593475) | 4 |
| Bacteria | Polynucleobacter sp. UB-Domo-W1 | 1 |
| Bacteria | Clostridium acetobutylicum | 1 |
| Vertebrates | Nothobranchius rachovii | 4 |
| Invertebrates | Heligmosomoides polygyrus | 2 |
| Bacteria | Erysipelotrichaceae bacterium 5_2_54FAA | 7 |
| Bacteria | Clostridium vincentii | 7 |
| Bacteria | Virgibacillus salinus | 4 |
| Bacteria | Bacillus megaterium NBRC 15308 = ATCC 14581 | 1 |
| Bacteria | Burkholderia sp. 2002721687 | 2 |
| Bacteria | Altererythrobacter sp. Root672 | 1 |
| Bacteria | Peptostreptococcus stomatis DSM 17678 | 1 |
| Bacteria | Vibrio orientalis CIP 102891 = ATCC 33934 | 5 |
| Bacteria | Alkalibacterium putridalgicola | 3 |
| Bacteria | Enterococcus phoeniculicola ATCC BAA-412 | 25 |
| Bacteria | Devosia epidermidihirudinis | 1 |
| Bacteria | Candidatus Protochlamydia amoebophila UWE25 | 2 |
| Primates | Propithecus coquereli | 34 |
| Bacteria | Hungatella hathewayi WAL-18680 | 19 |
| Bacteria | Vibrio halioticoli NBRC 102217 | 3 |
| Bacteria | Streptococcus cuniculi | 19 |
| Bacteria | Planctomycetes bacterium DG_58 | 2 |
| Bacteria | Lactobacillus allii | 7 |
| Vertebrates | Cuculus canorus | 6 |
| Bacteria | Catenibacterium mitsuokai | 3 |
| Bacteria | Clostridioides difficile 630 | 29 |
| Bacteria | Leifsonia sp. Root4 | 1 |
| Bacteria | Planctomycetes bacterium RBG_16_59_8 | 3 |
| Bacteria | Rhodobacteraceae bacterium GWE1_64_9 | 1 |
| Bacteria | Lactobacillus crispatus | 7 |
| Bacteria | Melghirimyces profundicolus | 6 |
| Bacteria | Bacillus sp. SA1-12 | 13 |
| Bacteria | Streptomyces sp. WAC05858 | 3 |
| Vertebrates | Nothobranchius korthausae | 9 |
| Bacteria | Eubacterium sp. AM18-10LB-B | 5 |
| Bacteria | Salmonella enterica subsp. enterica serovar Newport | 7 |
| Bacteria | Anaerostipes caccae DSM 14662 | 46 |
| Bacteria | Streptobacillus moniliformis DSM 12112 | 11 |
| Bacteria | Azospirillum lipoferum 4B | 3 |
| Bacteria | Pseudomonas antarctica | 1 |
| Bacteria | Phycisphaerales bacterium | 12 |
| Bacteria | Opitutaceae bacterium TAV4 | 3 |
| Bacteria | Bacillus aquimaris | 9 |
| Bacteria | bacterium (Candidatus Ratteibacteria) CG01_land_8_20_14_3_00_40_19 | 2 |
| Mammals | Lipotes vexillifer | 17 |
| Bacteria | Enterococcus canis | 10 |
| Bacteria | Rahnella aquatilis CIP 78.65 = ATCC 33071 | 6 |
| Bacteria | Halomonas anticariensis FP35 = DSM 16096 | 2 |
| Bacteria | Vibrio sp. JCM 19052 | 2 |
| Bacteria | Streptococcus agalactiae FSL S3-170 | 1 |
| Bacteria | Lactobacillus sp. HT111-2 | 3 |
| Bacteria | Mesorhizobium sp. AA22 | 1 |
| Vertebrates | Alligator sinensis | 33 |
| Bacteria | Tistrella mobilis | 1 |
| Bacteria | Olsenella umbonata | 10 |
| Mammals | Cervus elaphus hippelaphus | 8 |
| Bacteria | Rhodobacter aestuarii | 1 |
| Bacteria | Pseudoalteromonas porphyrae | 1 |
| Bacteria | Desulfosoma caldarium | 2 |
| Invertebrates | Mesocestoides corti | 4 |
| Bacteria | Chlamydia pecorum DBDeUG | 2 |
| Bacteria | Helcococcus kunzii ATCC 51366 | 16 |
| Bacteria | Bacillus pumilus SAFR-032 | 10 |
| Bacteria | Enterococcus faecium 1,231,408 | 6 |
| Bacteria | Escherichia coli UMEA 3718-1 | 5 |
| Bacteria | Lactobacillus agilis DSM 20509 | 5 |
| Bacteria | Escherichia coli O118:H16 str. 2009C-4446 | 3 |
| Environmental samples | uncultured Clostridium sp. | 89 |
| Bacteria | Ethanoligenens harbinense YUAN-3 | 5 |
| Bacteria | Pediococcus acidilactici D3 | 7 |
| Bacteria | Salmonella enterica subsp. enterica serovar Gaminara | 5 |
| Bacteria | Oceanicola granulosus HTCC2516 | 1 |
| Bacteria | Vibrio xiamenensis | 3 |
| Bacteria | Loktanella sp. 3ANDIMAR09 | 1 |
| Bacteria | Leptotrichia sp. oral taxon 847 | 5 |
| Bacteria | Chromobacterium sp. F49 | 1 |
| Environmental samples | freshwater metagenome | 2 |
| Bacteria | Corynebacterium lowii | 3 |
| Bacteria | Lentisphaerae bacterium ADurb.Bin242 | 5 |
| Bacteria | Erwinia sp. OLMDLW33 | 5 |
| Bacteria | Methylobacterium sp. 17Sr1-43 | 2 |
| Bacteria | Sulfuritalea hydrogenivorans sk43H | 1 |
| Bacteria | Neisseria sp. | 4 |
| Bacteria | Pasteurella multocida subsp. multocida str. Anand1_cattle | 3 |
| Bacteria | Bartonella ancashensis | 2 |
| Bacteria | Selenomonas sp. oral taxon 892 str. F0426 | 2 |
| Bacteria | Virgibacillus massiliensis | 11 |
| Bacteria | Bacillus sp. cl95 | 1 |
| Bacteria | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 12 |
| Bacteria | Kluyvera ascorbata | 9 |
| Bacteria | Cetobacterium somerae ATCC BAA-474 | 13 |
| Bacteria | Enterobacter soli ATCC BAA-2102 | 3 |
| Bacteria | Escherichia coli O128:H2 str. 2011C-3317 | 6 |
| Bacteria | Streptomyces viridochromogenes DSM 40736 | 2 |
| Bacteria | Maritimibacter sp. | 1 |
| Invertebrates | Anopheles melas | 3 |
| Bacteria | Estrella lausannensis | 2 |
| Bacteria | PVC group bacterium (ex Bugula neritina AB1) | 1 |
| Bacteria | Rhizobium sp. C5 | 2 |
| Vertebrates | Opsanus beta | 2 |
| Bacteria | Halolactibacillus halophilus | 5 |
| Bacteria | Acinetobacter brisouii CIP 110357 | 2 |
| Bacteria | Planctomycetaceae bacterium TMED10 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Agona str. SL483 | 6 |
| Bacteria | Clostridium sp. 42_12 | 1 |
| Bacteria | Pseudescherichia vulneris NBRC 102420 | 5 |
| Bacteria | Citromicrobium sp. RCC1885 | 1 |
| Bacteria | Pseudomonas fluorescens | 5 |
| Bacteria | Bacillus thuringiensis str. Al Hakam | 1 |
| Bacteria | Erysipelotrichaceae bacterium MTC7 | 15 |
| Bacteria | Bacillus sp. AFS041924 | 2 |
| Bacteria | Escherichia coli KTE193 | 2 |
| Invertebrates | Brugia pahangi | 5 |
| Bacteria | Pseudogulbenkiania ferrooxidans 2002 | 2 |
| Bacteria | Spartobacteria bacterium AMD-G4 | 2 |
| Invertebrates | Biomphalaria glabrata | 8 |
| Bacteria | Paenibacillus sp. oral taxon 786 str. D14 | 8 |
| Bacteria | Lactobacillus formosensis | 1 |
| Bacteria | Gordonia hirsuta DSM 44140 = NBRC 16056 | 2 |
| Bacteria | candidate division KSB1 bacterium 4484_188 | 2 |
| Bacteria | Microvirga sp. 17 mud 1-3 | 3 |
| Bacteria | Bacillus coagulans | 13 |
| Bacteria | Rhizobium oryzae | 2 |
| Bacteria | Shewanella mangrovi | 1 |
| Bacteria | Deltaproteobacteria bacterium ADurb.Bin135 | 1 |
| Bacteria | Enterococcus faecalis 13-SD-W-01 | 11 |
| Invertebrates | Caenorhabditis briggsae | 4 |
| Bacteria | Candidatus Vecturithrix granuli | 5 |
| Bacteria | Spirochaetes bacterium ADurb.BinA120 | 4 |
| Environmental samples | Clostridium sp. CAG:242 | 2 |
| Vertebrates | Amphiprion ocellaris | 28 |
| Bacteria | Streptococcus anginosus DORA_7 | 4 |
| Bacteria | Rhodocyclales bacterium CG_4_9_14_3_um_filter_68_10 | 1 |
| Invertebrates | Papilio xuthus | 2 |
| Bacteria | Methylophaga thiooxydans | 1 |
| Bacteria | Streptomyces violaceusniger Tu 4113 | 2 |
| Bacteria | Aeromonas hydrophila | 3 |
| Bacteria | Oceanobacillus iheyensis | 1 |
| Bacteria | Lactobacillus kimbladii | 13 |
| Bacteria | Clostridium fallax | 7 |
| Bacteria | Nocardioides sp. Root240 | 1 |
| Bacteria | Corynebacterium glaucum | 2 |
| Bacteria | Thermosediminibacter oceani DSM 16646 | 6 |
| Bacteria | Geodermatophilus africanus | 1 |
| Bacteria | Pseudopelagicola gijangensis | 1 |
| Bacteria | Lactobacillus plantarum | 31 |
| Bacteria | Streptococcus pneumoniae TCH8431/19A | 4 |
| Invertebrates | Parastrongyloides trichosuri | 4 |
| Bacteria | Candidatus Cloacimonas sp. 4484_275 | 5 |
| Bacteria | Desulfobacterium autotrophicum HRM2 | 4 |
| Bacteria | Pseudobutyrivibrio ruminis | 3 |
| Bacteria | Staphylococcus simulans | 4 |
| Bacteria | Azoarcus sp. DN11 | 1 |
| Bacteria | Comamonas sp. SCN 67-35 | 1 |
| Bacteria | Sphingobium sp. Leaf26 | 1 |
| Bacteria | Treponema sp. GWC1_61_84 | 7 |
| Bacteria | [Clostridium] innocuum 2959 | 24 |
| Bacteria | Thermanaerothrix daxensis | 4 |
| Bacteria | Clostridium botulinum C/D str. It1 | 1 |
| Bacteria | Mitsuokella jalaludinii | 4 |
| Bacteria | Megamonas funiformis YIT 11815 | 9 |
| Bacteria | Lactobacillus rhamnosus LMS2-1 | 11 |
| Bacteria | Vibrio sp. V15_P4S5T153 | 7 |
| Bacteria | Anaerorhabdus furcosa | 14 |
| Bacteria | Tetragenococcus halophilus subsp. flandriensis | 6 |
| Bacteria | Sinomonas sp. R1AF57 | 3 |
| Bacteria | Brochothrix thermosphacta | 8 |
| Bacteria | Staphylococcus pettenkoferi VCU012 | 5 |
| Bacteria | Alphaproteobacteria bacterium 32-64-14 | 1 |
| Bacteria | Spiroplasma melliferum KC3 | 4 |
| Bacteria | Treponema bryantii | 6 |
| Bacteria | Paenibacillus sp. F4 | 1 |
| Bacteria | Streptococcus varani | 14 |
| Bacteria | Trabulsiella guamensis ATCC 49490 | 8 |
| Bacteria | Bacillus cereus VD045 | 1 |
| Bacteria | Sphingobium sp. YR768 | 1 |
| Bacteria | Actinoplanes sp. SE50/110 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_45_15 | 1 |
| Bacteria | Vibrio sp. BEI233 | 12 |
| Bacteria | Citrobacter koseri ATCC BAA-895 | 11 |
| Bacteria | Salmonella enterica subsp. enterica serovar Kottbus | 6 |
| Bacteria | Coprobacillus sp. 3_3_56FAA | 15 |
| Bacteria | Thermogutta terrifontis | 3 |
| Bacteria | Aliivibrio wodanis | 4 |
| Bacteria | Sporanaerobacter sp. PP17-6a | 29 |
| Bacteria | Kluyvera georgiana ATCC 51603 | 11 |
| Bacteria | Cognatiyoonia sediminum | 1 |
| Bacteria | Yersinia similis | 2 |
| Bacteria | Hydrogenophilales bacterium 28-61-23 | 2 |
| Bacteria | Brachybacterium sp. SW0106-09 | 3 |
| Bacteria | Gordonia sp. i37 | 1 |
| Bacteria | Endozoicomonas montiporae | 3 |
| Bacteria | Paenirhodobacter enshiensis | 2 |
| Bacteria | Burkholderia glumae BGR1 | 1 |
| Bacteria | Flavonifractor sp. An306 | 1 |
| Bacteria | Propionibacterium acidifaciens F0233 | 6 |
| Bacteria | Enterobacter sp. Ag1 | 4 |
| Bacteria | Citrobacter freundii complex sp. CFNIH3 | 2 |
| Bacteria | Escherichia sp. KTE31 | 3 |
| Bacteria | Clostridium saccharoperbutylacetonicum N1-4(HMT) | 8 |
| Invertebrates | Enterobius vermicularis | 4 |
| Bacteria | Thermotalea metallivorans | 1 |
| Bacteria | Eubacterium sp. 68-3-10 | 2 |
| Mammals | Delphinapterus leucas | 44 |
| Bacteria | Enterococcus faecium 10/96A | 8 |
| Bacteria | Rhizobacter sp. Root1221 | 1 |
| Bacteria | Eubacterium sp. 38_16 | 1 |
| Bacteria | Microbacterium sp. MYb45 | 2 |
| Bacteria | Serratia fonticola | 10 |
| Bacteria | Citrobacter freundii | 8 |
| Bacteria | Phyllobacterium sp. YR620 | 2 |
| Bacteria | Pelosinus fermentans JBW45 | 10 |
| Bacteria | Lactobacillus paraplantarum | 5 |
| Bacteria | Thiothrix lacustris | 3 |
| Bacteria | Salipaludibacillus aurantiacus | 7 |
| Bacteria | Enterovibrio nigricans DSM 22720 | 7 |
| Bacteria | Olsenella sp. oral taxon 807 | 7 |
| Bacteria | Enterobacter cloacae subsp. cloacae | 2 |
| Invertebrates | Thelazia callipaeda | 4 |
| Bacteria | Streptococcus urinalis 2285-97 | 7 |
| Bacteria | Desulfocarbo indianensis | 1 |
| Bacteria | Desulfobacca sp. RBG_16_60_12 | 1 |
| Bacteria | Lactococcus lactis subsp. cremoris MG1363 | 3 |
| Bacteria | Oenococcus oeni | 4 |
| Invertebrates | Anopheles gambiae | 6 |
| Bacteria | Pseudomonas sp. URIL14HWK12:I9 | 3 |
| Bacteria | Boseongicola aestuarii | 1 |
| Bacteria | Sporolactobacillus laevolacticus DSM 442 | 8 |
| Bacteria | Pseudonocardia sp. EC080619-01 | 1 |
| Bacteria | Photobacterium gaetbulicola | 4 |
| Bacteria | Streptomyces xiamenensis | 2 |
| Bacteria | [Ruminococcus] gnavus ATCC 29149 | 2 |
| Bacteria | Actinobacillus pleuropneumoniae | 2 |
| Mammals | Pteropus alecto | 11 |
| Bacteria | Enterococcus sp. 9D6_DIV0238 | 7 |
| Bacteria | Lactococcus lactis subsp. lactis | 7 |
| Bacteria | Mycoplasma feriruminatoris | 5 |
| Bacteria | Faecalicoccus pleomorphus | 9 |
| Invertebrates | Caenorhabditis elegans | 13 |
| Bacteria | Avibacterium paragallinarum JF4211 | 3 |
| Invertebrates | Anopheles coluzzii | 1 |
| Bacteria | Streptomyces sp. GGCR-6 | 2 |
| Bacteria | Bacillus enclensis | 7 |
| Bacteria | Lactobacillus fermentum | 4 |
| Bacteria | [Clostridium] asparagiforme DSM 15981 | 17 |
| Bacteria | Carnobacterium maltaromaticum DSM 20342 | 11 |
| Bacteria | Lachnoclostridium sp. YL32 | 13 |
| Bacteria | Paenibacillus sp. TI45-13ar | 7 |
| Environmental samples | uncultured bacterium | 6 |
| Bacteria | Roseobacter sp. CCS2 | 1 |
| Bacteria | [Clostridium] clostridioforme 90A8 | 4 |
| Bacteria | Bacillus nealsonii AAU1 | 5 |
| Bacteria | Syntrophobacteraceae bacterium CG2_30_61_12 | 2 |
| Bacteria | Streptococcus equinus ATCC 700338 | 3 |
| Bacteria | Mesorhizobium mediterraneum | 2 |
| Bacteria | Paenibacillus nanensis | 2 |
| Bacteria | Vibrio sp. LJC006 | 4 |
| Bacteria | Escherichia coli 2-210-07_S3_C3 | 6 |
| Bacteria | Rhodothermaceae bacterium RA | 2 |
| Environmental samples | Eubacterium sp. CAG:161 | 4 |
| Bacteria | Shigella flexneri 4c | 6 |
| Bacteria | Streptomyces resistomycificus | 2 |
| Bacteria | Actinomyces glycerinitolerans | 6 |
| Bacteria | Cohaesibacter gelatinilyticus | 1 |
| Bacteria | Phenylobacterium zucineum HLK1 | 1 |
| Bacteria | Sphingomonas sp. IBVSS2 | 1 |
| Bacteria | Symbiobacterium thermophilum IAM 14863 | 3 |
| Bacteria | Candidatus Brocadia sapporoensis | 2 |
| Bacteria | Escherichia coli 9.0111 | 6 |
| Bacteria | Opitutae bacterium Tous-C1TDCM | 2 |
| Bacteria | Thiothrix eikelboomii | 1 |
| Bacteria | Halanaerobium sp. DL-01 | 5 |
| Bacteria | Microbacterium sp. SCN 69-37 | 2 |
| Bacteria | Providencia burhodogranariea DSM 19968 | 7 |
| Bacteria | Agrobacterium vitis | 1 |
| Bacteria | Mycoplasma hyorhinis HUB-1 | 3 |
| Bacteria | Jannaschia pohangensis | 1 |
| Bacteria | Streptococcus pneumoniae GA49447 | 5 |
| Bacteria | Candidatus Hydrogenedentes bacterium | 4 |
| Environmental samples | uncultured Megasphaera sp. | 2 |
| Bacteria | Jannaschia faecimaris | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Kingston | 5 |
| Bacteria | Vibrio cholerae 2740-80 | 8 |
| Bacteria | Candidatus Accumulibacter phosphatis clade IIA str. UW-1 | 1 |
| Bacteria | Stenotrophomonas sp. 278 | 1 |
| Bacteria | Vibrio sp. VPAP30 | 3 |
| Bacteria | Virgibacillus soli | 4 |
| Bacteria | Salmonella sp. HMSC13B08 | 7 |
| Bacteria | Clostridiaceae bacterium AF29-16BH | 6 |
| Bacteria | Thiorhodovibrio sp. 970 | 1 |
| Bacteria | Anaerostipes sp. 494a | 13 |
| Bacteria | Streptomyces noursei ATCC 11455 | 1 |
| Bacteria | Mycoplasma sp. (ex Biomphalaria glabrata) | 1 |
| Bacteria | [Actinobacillus] rossii | 5 |
| Bacteria | Rhizobium leguminosarum bv. viciae 3841 | 2 |
| Bacteria | Photobacterium aquimaris | 6 |
| Bacteria | Halopolyspora algeriensis | 1 |
| Bacteria | Gallibacterium anatis UMN179 | 2 |
| Bacteria | Microbacterium hydrocarbonoxydans | 3 |
| Bacteria | Spiroplasma apis B31 | 4 |
| Bacteria | Sandaracinus sp. | 1 |
| Bacteria | Staphylococcus rostri | 5 |
| Bacteria | Paraburkholderia caryophylli | 1 |
| Bacteria | Rathayibacter iranicus NCPPB 2253 = VKM Ac-1602 | 4 |
| Bacteria | Pararhizobium polonicum | 1 |
| Bacteria | Erythrobacter sp. SCN 62-14 | 1 |
| Bacteria | Pseudomonas syringae pv. syringae | 1 |
| Bacteria | Bartonella apis | 4 |
| Bacteria | Rhizobium leguminosarum bv. trifolii WSM2297 | 1 |
| Bacteria | Anaerococcus tetradius ATCC 35098 | 2 |
| Bacteria | Escherichia coli G3/10 | 5 |
| Bacteria | Escherichia coli MS 198-1 | 4 |
| Bacteria | Escherichia coli MS 145-7 | 3 |
| Bacteria | Planctomycetes bacterium DG_20 | 3 |
| Bacteria | Haemophilus parahaemolyticus HK385 | 3 |
| Bacteria | Providencia stuartii | 6 |
| Invertebrates | Doryteuthis pealeii | 3 |
| Bacteria | Paenibacillus odorifer | 4 |
| Bacteria | Rhodopseudomonas palustris BisB5 | 1 |
| Rodents | Cricetulus griseus | 11 |
| Bacteria | Sphingomonas jeddahensis | 1 |
| Bacteria | Pseudomonas sp. LTJR-52 | 1 |
| Bacteria | Mycolicibacterium aurum | 2 |
| Bacteria | Klebsiella quasivariicola | 5 |
| Bacteria | Sphingomonas sp. S7-754 | 1 |
| Bacteria | Buttiauxella sp. 3AFRM03 | 1 |
| Bacteria | Salinivibrio sp. MA351 | 3 |
| Bacteria | Pseudopropionibacterium propionicum | 3 |
| Bacteria | Verrucomicrobia bacterium IMCC26134 | 2 |
| Bacteria | Burkholderia seminalis | 1 |
| Bacteria | Vogesella sp. EB | 2 |
| Bacteria | Candidatus Omnitrophica bacterium CG_4_9_14_0_2_um_filter_42_8 | 2 |
| Bacteria | Escherichia coli 1-250-04_S3_C2 | 2 |
| Bacteria | Lentisphaera araneosa HTCC2155 | 8 |
| Bacteria | Lactobacillus paracasei subsp. paracasei ATCC 25302 | 6 |
| Bacteria | Waddliaceae bacterium | 2 |
| Bacteria | Spirochaetes bacterium RBG_16_49_21 | 4 |
| Bacteria | Brevibacillus fluminis | 1 |
| Bacteria | Thioalkalivibrio nitratireducens DSM 14787 | 1 |
| Bacteria | Thermoanaerobacterium xylanolyticum LX-11 | 8 |
| Bacteria | Anaerococcus octavius | 8 |
| Bacteria | Wenzhouxiangella sp. 15181 | 1 |
| Bacteria | Faecalibacterium prausnitzii SL3/3 | 2 |
| Bacteria | Microbacterium lemovicicum | 3 |
| Bacteria | Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 | 4 |
| Bacteria | Enterococcus rotai | 9 |
| Bacteria | Rhodobacter sp. 24-YEA-8 | 1 |
| Bacteria | Mycoplasma amphoriforme A39 | 2 |
| Bacteria | Sphingomonadales bacterium 32-64-17 | 1 |
| Bacteria | Pantoea deleyi | 2 |
| Bacteria | Streptomyces sp. JV178 | 1 |
| Bacteria | Bacillus thermoamylovorans | 14 |
| Bacteria | Planctomyces sp. SCGC AG-212-M04 | 2 |
| Bacteria | Borreliella burgdorferi B31 | 3 |
| Bacteria | Aerococcus sp. HMSC035B07 | 3 |
| Bacteria | Streptomyces sp. CB01201 | 2 |
| Bacteria | marine gamma proteobacterium HTCC2080 | 1 |
| Bacteria | Escherichia coli MS 115-1 | 4 |
| Bacteria | Corynebacterium sp. YIM 101343 | 1 |
| Bacteria | Hydrogenophilales bacterium CG12_big_fil_rev_8_21_14_0_65_61_21 | 1 |
| Bacteria | Desulfobacula toluolica Tol2 | 3 |
| Bacteria | Kosakonia radicincitans DSM 16656 | 3 |
| Bacteria | Sphingomonas sp. HMF7854 | 1 |
| Bacteria | Mycolicibacterium wolinskyi | 1 |
| Bacteria | Melghirimyces thermohalophilus | 8 |
| Bacteria | Thioflavicoccus mobilis 8321 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Stanley | 4 |
| Bacteria | Mesoplasma chauliocola | 2 |
| Bacteria | Collinsella sp. An7 | 2 |
| Bacteria | Streptococcus pneumoniae R6 | 8 |
| Environmental samples | Clostridium bolteae CAG:59 | 3 |
| Bacteria | Bacillus lentus | 5 |
| Bacteria | Vibrio parahaemolyticus VP766 | 3 |
| Bacteria | Pseudomonas jinjuensis | 2 |
| Bacteria | Rhizobiales bacterium GAS191 | 1 |
| Bacteria | Vibrio cholerae MO10 | 8 |
| Bacteria | Bacillus sp. JCM 19045 | 7 |
| Environmental samples | Eubacterium sp. CAG:180 | 1 |
| Bacteria | Sphingomonas sp. S-NIH.Pt1_0416 | 2 |
| Bacteria | Enterococcus faecalis 02-MB-BW-10 | 2 |
| Bacteria | Geobacteraceae bacterium GWB2_52_12 | 1 |
| Bacteria | Lactobacillus crustorum | 3 |
| Bacteria | Candidatus Brocadia fulgida | 2 |
| Bacteria | Brevibacillus choshinensis | 1 |
| Bacteria | Acidovorax carolinensis | 1 |
| Bacteria | Enterococcus faecium EnGen0033 | 3 |
| Invertebrates | Rhipicephalus zambeziensis | 2 |
| Bacteria | Saccharopolyspora flava | 1 |
| Bacteria | Frondihabitans sp. PhB188 | 3 |
| Bacteria | Anaerobutyricum hallii DSM 3353 | 3 |
| Bacteria | Citrobacter sp. MGH106 | 3 |
| Bacteria | Leifsonia sp. Root1293 | 3 |
| Bacteria | Aeromicrobium sp. 592 | 1 |
| Bacteria | Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 | 1 |
| Bacteria | Streptococcus agalactiae serogroup III | 1 |
| Bacteria | Corynebacterium glucuronolyticum ATCC 51866 | 2 |
| Bacteria | Osedax symbiont Rs2 | 1 |
| Bacteria | Veillonella sp. HPA0037 | 1 |
| Bacteria | Mitsuokella multacida DSM 20544 | 7 |
| Bacteria | Streptomyces sp. Amel2xC10 | 1 |
| Bacteria | Lactobacillus hayakitensis DSM 18933 = JCM 14209 | 3 |
| Bacteria | Streptococcus infantis SK970 | 2 |
| Bacteria | Enterococcus faecalis VC1B-1 | 7 |
| Bacteria | Lactobacillus nantensis DSM 16982 | 4 |
| Bacteria | Gordonia polyisoprenivorans VH2 | 1 |
| Bacteria | Anoxybacillus sp. BCO1 | 8 |
| Bacteria | Pseudomonas sp. HLS-6 | 3 |
| Bacteria | Aeromonas sp. ASNIH5 | 1 |
| Bacteria | Aerococcus sanguinicola | 2 |
| Bacteria | Pseudodesulfovibrio hydrargyri | 2 |
| Bacteria | Colwellia psychrerythraea | 1 |
| Bacteria | Corynebacterium amycolatum SK46 | 1 |
| Bacteria | Chloroflexi bacterium ADurb.Bin222 | 2 |
| Bacteria | Actinoplanes lutulentus | 1 |
| Bacteria | Rhizobium sp. 63-7 | 2 |
| Bacteria | Jhaorihella thermophila | 1 |
| Invertebrates | Bactrocera latifrons | 1 |
| Bacteria | bacterium F11 | 2 |
| Bacteria | Dechloromonas aromatica RCB | 2 |
| Invertebrates | Osedax japonicus | 2 |
| Bacteria | Corynebacterium kutscheri | 1 |
| Bacteria | Lachnospiraceae bacterium 1_4_56FAA | 1 |
| Bacteria | Chitinimonas taiwanensis DSM 18899 | 2 |
| Bacteria | Caulobacteraceae bacterium OTSz_A_272 | 1 |
| Bacteria | Sphingopyxis sp. WS5A3p | 1 |
| Bacteria | Sphingopyxis sp. 113P3 | 1 |
| Bacteria | Sphingobium sp. AEW4 | 1 |
| Vertebrates | Chelonia mydas | 8 |
| Bacteria | Alkalibacterium gilvum | 6 |
| Vertebrates | Corvus brachyrhynchos | 5 |
| Bacteria | Neisseria dentiae | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Sanjuan | 12 |
| Bacteria | Halanaerobium hydrogeniformans | 8 |
| Bacteria | Ralstonia pickettii | 1 |
| Bacteria | Kocuria sp. M5W7-7 | 5 |
| Bacteria | Lactobacillus farciminis | 4 |
| Bacteria | Mesoplasma entomophilum | 1 |
| Bacteria | Lachnospiraceae bacterium XBB1006 | 1 |
| Bacteria | Sporolactobacillus nakayamae | 15 |
| Bacteria | Halanaerobium sp. | 3 |
| Bacteria | Sulfitobacter sp. SK012 | 1 |
| Bacteria | Planctomycetes bacterium GWC2_39_26 | 1 |
| Bacteria | Paenibacillus sp. OV191 | 4 |
| Bacteria | Thermoanaerobacterium thermosaccharolyticum DSM 571 | 3 |
| Bacteria | Megamonas rupellensis | 3 |
| Bacteria | Saccharopolyspora erythraea NRRL 2338 | 1 |
| Invertebrates | Drosophila guanche | 2 |
| Bacteria | Agrobacterium genomosp. 2 str. CFBP 5494 | 1 |
| Bacteria | Tenacibaculum sp. DSM 106434 | 1 |
| Bacteria | Escherichia coli DEC1B | 4 |
| Bacteria | Vibrio fluvialis | 6 |
| Vertebrates | Nothobranchius kadleci | 7 |
| Bacteria | Pediococcus pentosaceus | 5 |
| Bacteria | Arthrobacter sp. YC-RL1 | 1 |
| Bacteria | Lactobacillus aquaticus DSM 21051 | 3 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.003.02.1.1 | 1 |
| Bacteria | Streptococcus penaeicida | 4 |
| Bacteria | Vibrio sp. V03_P4A6T147 | 3 |
| Bacteria | Erythrobacter sp. QSSC1-22B | 1 |
| Bacteria | Rhodospirillales bacterium 39-66-50 | 1 |
| Bacteria | Clostridium sp. AM28-20LB | 1 |
| Bacteria | Thermoanaerobacter ethanolicus CCSD1 | 5 |
| Bacteria | Bacillus asahii | 1 |
| Bacteria | Salinivibrio sp. KP-1 | 4 |
| Bacteria | Clostridiaceae bacterium AF18-31LB | 7 |
| Bacteria | Rhodopirellula sp. TMED11 | 3 |
| Bacteria | Williamsia sterculiae | 1 |
| Bacteria | Sphingomonas sp. Root710 | 1 |
| Bacteria | Bradyrhizobium sp. SK17 | 1 |
| Bacteria | Pseudomonas mandelii | 1 |
| Bacteria | Photobacterium sp. SKA34 | 2 |
| Bacteria | Neisseria sp. N95_16 | 1 |
| Bacteria | Paracoccus saliphilus | 1 |
| Bacteria | Bacillus sp. V3-13 | 14 |
| Bacteria | Geodermatophilus nigrescens | 1 |
| Invertebrates | Glossina brevipalpis | 1 |
| Bacteria | Buchnera aphidicola str. Sg (Schizaphis graminum) | 1 |
| Bacteria | Streptococcus massiliensis | 3 |
| Bacteria | Streptococcus macacae NCTC 11558 | 6 |
| Bacteria | Lactobacillus thailandensis DSM 22698 = JCM 13996 | 7 |
| Bacteria | Rugosibacter aromaticivorans | 1 |
| Bacteria | Streptococcus sp. HMSC34B10 | 1 |
| Bacteria | Shigella boydii ATCC 9905 | 2 |
| Bacteria | SAR324 cluster bacterium | 2 |
| Bacteria | Paenibacillus sp. JDR-2 | 2 |
| Bacteria | Erwinia typographi | 6 |
| Bacteria | Phenylobacterium sp. Root700 | 2 |
| Bacteria | Pantoea ananatis AJ13355 | 2 |
| Bacteria | Pseudolabrys sp. Root1462 | 1 |
| Bacteria | Rhizobium sp. | 1 |
| Bacteria | Alcaligenes sp. EGD-AK7 | 1 |
| Bacteria | Olsenella sp. KH3B4 | 3 |
| Bacteria | Turneriella parva DSM 21527 | 2 |
| Bacteria | Paenibacillus sp. cl141a | 2 |
| Bacteria | Rothia aeria F0474 | 1 |
| Bacteria | Staphylococcus pasteuri | 3 |
| Bacteria | Lactobacillus hamsteri DSM 5661 = JCM 6256 | 2 |
| Bacteria | Colwellia sp. RSH04 | 1 |
| Bacteria | Micrococcus lylae | 1 |
| Bacteria | Subdoligranulum sp. APC924/74 | 2 |
| Bacteria | Bacillus sp. FJAT-22058 | 2 |
| Bacteria | Thermococcus celer Vu 13 = JCM 8558 | 1 |
| Bacteria | Pseudomonas sp. HMSC065H01 | 1 |
| Bacteria | Diaphorobacter sp. J5-51 | 1 |
| Bacteria | Thermoplasmata archaeon M8B2D | 2 |
| Bacteria | Leptospira licerasiae serovar Varillal str. VAR 010 | 1 |
| Bacteria | Paramaledivibacter caminithermalis DSM 15212 | 5 |
| Bacteria | Arthrobacter sp. Hz2 | 4 |
| Bacteria | Salmonella enterica subsp. diarizonae serovar 16:z10:e,n,x,z15 | 6 |
| Bacteria | Escherichia coli NCCP15648 | 4 |
| Bacteria | Chlorobi bacterium OLB5 | 1 |
| Plants and Fungi | Chondrus crispus | 1 |
| Invertebrates | Tetranychus urticae | 3 |
| Bacteria | Halomonas aestuarii | 1 |
| Bacteria | Mycetocola reblochoni | 3 |
| Bacteria | Lachnoclostridium sp. An118 | 3 |
| Bacteria | Bulleidia extructa W1219 | 1 |
| Bacteria | Bacillus salsus | 4 |
| Bacteria | Eubacterium sp. 14-2 | 2 |
| Bacteria | Rhizobacter sp. S-16 | 1 |
| Bacteria | Terribacillus saccharophilus | 5 |
| Bacteria | Paracoccus pantotrophus | 1 |
| Bacteria | Neisseria meningitidis M0579 | 1 |
| Bacteria | Enterococcus faecium R496 | 9 |
| Bacteria | Gemmatimonadetes bacterium SCN 70-22 | 1 |
| Bacteria | Kocuria flava | 3 |
| Bacteria | Streptococcus ictaluri 707-05 | 8 |
| Bacteria | Desulfatitalea sp. BRH_c12 | 3 |
| Bacteria | Bacillus safensis | 1 |
| Bacteria | Methylacidiphilum fumariolicum SolV | 1 |
| Bacteria | Halomonas sp. | 2 |
| Bacteria | Lactobacillus kefiranofaciens | 2 |
| Bacteria | Rhizobium sp. YS-1r | 2 |
| Bacteria | Amycolatopsis rifamycinica | 1 |
| Bacteria | Curtobacterium sp. MCBD17_032 | 3 |
| Bacteria | Leuconostocaceae bacterium R-53105 | 1 |
| Bacteria | Pelagivirga sediminicola | 1 |
| Bacteria | Aeromicrobium choanae | 2 |
| Bacteria | Stigmatella aurantiaca | 2 |
| Bacteria | Corallincola sp. C4 | 1 |
| Bacteria | Pseudomonas coronafaciens pv. atropurpurea | 1 |
| Bacteria | Desulfobacterales bacterium PC51MH44 | 1 |
| Bacteria | Syntrophus gentianae | 2 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 | 1 |
| Bacteria | Escherichia coli 2-427-07_S4_C3 | 4 |
| Bacteria | Natrinema salaciae | 1 |
| Bacteria | Finegoldia magna BVS033A4 | 1 |
| Vertebrates | Latimeria chalumnae | 9 |
| Bacteria | Rhodospirillaceae bacterium TMED8 | 1 |
| Bacteria | Janthinobacterium sp. HH01 | 1 |
| Bacteria | Microvirgula aerodenitrificans | 1 |
| Bacteria | Microvirga lotononidis | 2 |
| Bacteria | Enterococcus faecium 505 | 6 |
| Bacteria | Nocardioides sp. K1W22B-1 | 1 |
| Bacteria | Salinihabitans flavidus | 1 |
| Bacteria | Succiniclasticum ruminis DSM 9236 | 1 |
| Bacteria | Bacterioplanes sanyensis | 1 |
| Vertebrates | Gavia stellata | 1 |
| Bacteria | Faecalibacterium prausnitzii A2-165 | 1 |
| Bacteria | Streptomyces sp. DI166 | 2 |
| Bacteria | Chelatococcus asaccharovorans | 3 |
| Bacteria | Oceanicella actignis | 1 |
| Bacteria | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8 | 2 |
| Environmental samples | Eubacterium sp. CAG:146 | 2 |
| Bacteria | Aerococcus suis | 3 |
| Bacteria | Sphingomonas sp. Leaf231 | 1 |
| Bacteria | Leifsonia sp. Leaf336 | 4 |
| Bacteria | Sphingopyxis sp. 65-8 | 1 |
| Bacteria | Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 | 9 |
| Bacteria | Nocardioides sp. Root224 | 3 |
| Bacteria | Candidatus Pantoea carbekii | 1 |
| Bacteria | Falsochrobactrum sp. HN4 | 1 |
| Bacteria | Actinobacillus lignieresii | 1 |
| Bacteria | Pseudomonas sp. Os17 | 2 |
| Bacteria | Arthrobacter sp. ATCC 21022 | 4 |
| Bacteria | Alkalibacterium pelagium | 5 |
| Bacteria | Marinomonas aquimarina | 1 |
| Bacteria | Dorea sp. D27 | 3 |
| Bacteria | Pseudomonas amygdali pv. lachrymans | 1 |
| Bacteria | Opitutae bacterium TMED102 | 1 |
| Bacteria | Geomicrobium sp. JCM 19055 | 2 |
| Bacteria | Pseudomonas taetrolens | 2 |
| Bacteria | Vibrio celticus | 3 |
| Bacteria | Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160 | 3 |
| Bacteria | Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_56_26 | 2 |
| Bacteria | Halohasta litchfieldiae | 2 |
| Bacteria | Clostridium sp. AM51-4 | 1 |
| Bacteria | Gemmatimonadetes bacterium 13_2_20CM_2_65_7 | 2 |
| Bacteria | Ruegeria sp. PBVC088 | 1 |
| Bacteria | Carnobacterium iners | 4 |
| Bacteria | Blautia sp. AF19-10LB | 2 |
| Bacteria | Neisseria meningitidis alpha275 | 1 |
| Bacteria | Magnetospirillum sp. XM-1 | 1 |
| Bacteria | Solobacterium moorei | 1 |
| Bacteria | Sulfitobacter sp. AM1-D1 | 1 |
| Bacteria | Clostridium butyricum | 3 |
| Bacteria | Paenibacillus aquistagni | 1 |
| Bacteria | Nocardioides sp. Soil774 | 2 |
| Bacteria | Planctomycetes bacterium RBG_16_64_12 | 3 |
| Bacteria | Bacillus akibai JCM 9157 | 3 |
| Bacteria | Mycobacteriaceae bacterium 1482268.1 | 1 |
| Bacteria | Candidatus Omnitrophica bacterium | 8 |
| Bacteria | Escherichia coli KTE38 | 4 |
| Bacteria | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_47_16 | 2 |
| Bacteria | Brevibacillus panacihumi W25 | 2 |
| Bacteria | Clostridium sp. OM05-9BH | 1 |
| Bacteria | Caulobacter vibrioides CB15 | 1 |
| Bacteria | Streptococcus sp. HMSC056D07 | 4 |
| Environmental samples | marine metagenome | 3 |
| Bacteria | Spiroplasma eriocheiris | 5 |
| Invertebrates | Mizuhopecten yessoensis | 7 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_13_64_14 | 1 |
| Bacteria | Candidatus Paraburkholderia kirkii | 1 |
| Bacteria | Alteromonas sp. U0105 | 1 |
| Bacteria | Psychrosphaera saromensis | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.08.1.1 | 1 |
| Bacteria | Gemmatimonadetes bacterium 13_2_20CM_70_9 | 4 |
| Bacteria | Yersinia pseudotuberculosis | 3 |
| Bacteria | Dorea longicatena DSM 13814 | 1 |
| Invertebrates | Schistosoma japonicum | 1 |
| Bacteria | Nocardioides sp. Root190 | 1 |
| Bacteria | Aliifodinibius sp. WN023 | 4 |
| Bacteria | Variovorax sp. WS11 | 1 |
| Bacteria | Escherichia coli M718 | 3 |
| Bacteria | Planctomycetes bacterium GWF2_41_51 | 3 |
| Bacteria | Massilia sp. WF1 | 1 |
| Invertebrates | Euroglyphus maynei | 3 |
| Bacteria | Ahrensia marina | 1 |
| Bacteria | Variibacter gotjawalensis | 1 |
| Bacteria | Morganella psychrotolerans | 2 |
| Bacteria | Roseburia sp. AM23-20 | 1 |
| Bacteria | Opitutaceae bacterium TAV5 | 4 |
| Bacteria | Pseudohongiella acticola | 1 |
| Bacteria | Neisseria meningitidis serogroup B | 1 |
| Bacteria | Nitrosomonas cryotolerans ATCC 49181 | 1 |
| Bacteria | Erwinia amylovora ATCC BAA-2158 | 2 |
| Bacteria | Roseivivax isoporae LMG 25204 | 1 |
| Environmental samples | Eubacterium sp. CAG:251 | 1 |
| Bacteria | Marinobacter lutaoensis | 2 |
| Bacteria | Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED50 | 1 |
| Bacteria | Alphaproteobacteria bacterium ADurb.BinA280 | 1 |
| Bacteria | Avibacterium paragallinarum | 5 |
| Bacteria | Gammaproteobacteria bacterium TMED260 | 1 |
| Bacteria | Corynebacterium callunae DSM 20147 | 2 |
| Bacteria | Nitrospirae bacterium CG17_big_fil_post_rev_8_21_14_2_50_50_9 | 1 |
| Bacteria | Caloramator mitchellensis | 2 |
| Bacteria | Deltaproteobacteria bacterium RBG_19FT_COMBO_58_16 | 1 |
| Bacteria | Escherichia coli O145:NM str. 2010C-3526 | 2 |
| Bacteria | Ottowia sp. oral taxon 894 | 2 |
| Bacteria | Uliginosibacterium sp. TH139 | 1 |
| Bacteria | [Ruminococcus] gnavus | 3 |
| Bacteria | Zoogloeaceae bacteirum Par-f-2 | 1 |
| Bacteria | Streptococcus sp. DD04 | 1 |
| Bacteria | Moraxella sp. VT-16-12 | 1 |
| Bacteria | Kocuria rhizophila DC2201 | 2 |
| Bacteria | Corynebacterium tuscaniense DNF00037 | 1 |
| Bacteria | Veillonella dispar | 1 |
| Bacteria | Roseovarius atlanticus | 1 |
| Bacteria | Escherichia coli O145:H28 str. RM12581 | 2 |
| Bacteria | Streptomyces indicus | 2 |
| Bacteria | Curtobacterium citreum | 2 |
| Bacteria | Nocardioides sp. PD653 | 2 |
| Bacteria | Candidatus Thiomargarita nelsonii | 1 |
| Bacteria | Rothia mucilaginosa DY-18 | 1 |
| Bacteria | Lachnospiraceae bacterium A10 | 1 |
| Bacteria | Clostridium carboxidivorans P7 | 3 |
| Bacteria | Natronincola peptidivorans | 1 |
| Bacteria | Corynebacterium bovis | 2 |
| Bacteria | Arthrobacter sp. 31Cvi3.1E | 1 |
| Bacteria | Actinobacillus minor NM305 | 3 |
| Bacteria | Caloramator proteoclasticus DSM 10124 | 3 |
| Bacteria | Polynucleobacter asymbioticus | 1 |
| Bacteria | Corynebacterium terpenotabidum Y-11 | 1 |
| Bacteria | Microbacterium sp. JB110 | 1 |
| Bacteria | Chromobacterium sp. ATCC 53434 | 3 |
| Bacteria | Neisseria sp. HMSC077D05 | 1 |
| Bacteria | Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_60_11 | 1 |
| Bacteria | Aeromonas sp. A35_P | 1 |
| Bacteria | Maritalea myrionectae | 2 |
| Bacteria | Listeria seeligeri | 4 |
| Bacteria | Gallaecimonas xiamenensis 3-C-1 | 1 |
| Bacteria | Filomicrobium sp. | 1 |
| Bacteria | Quadrisphaera sp. DSM 44207 | 1 |
| Bacteria | Desulfobacteraceae bacterium 4572_19 | 1 |
| Bacteria | Candidatus Tokpelaia hoelldoblerii | 1 |
| Bacteria | Pseudomonas fulva | 2 |
| Bacteria | Bacillus sp. OK838 | 1 |
| Bacteria | Citrobacter sp. MY-5 | 1 |
| Bacteria | Paenibacillus mucilaginosus KNP414 | 3 |
| Environmental samples | uncultured Blautia sp. | 4 |
| Bacteria | Clostridium acidisoli DSM 12555 | 4 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 | 1 |
| Bacteria | Tsukamurella pulmonis | 2 |
| Bacteria | Rhizobium tropici CIAT 899 | 1 |
| Bacteria | Mycoplasma agalactiae PG2 | 1 |
| Bacteria | Corynebacterium marinum DSM 44953 | 2 |
| Bacteria | Caballeronia terrestris | 1 |
| Bacteria | Leifsonia sp. Root227 | 3 |
| Bacteria | Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14 | 1 |
| Bacteria | Candidatus Thioglobus sp. MED-G25 | 1 |
| Bacteria | Shewanella violacea | 1 |
| Bacteria | Lactobacillus ingluviei | 1 |
| Bacteria | Rouxiella badensis | 2 |
| Bacteria | Mesoplasma tabanidae | 1 |
| Bacteria | Sanguibacter keddieii DSM 10542 | 1 |
| Bacteria | Candidatus Brocadia sinica JPN1 | 3 |
| Bacteria | Verrucomicrobia subdivision 6 bacterium | 1 |
| Bacteria | Clostridium botulinum A2 str. Kyoto | 1 |
| Bacteria | Pseudoalteromonas sp. P1-26 | 1 |
| Bacteria | Neisseria sp. HMSC071C03 | 1 |
| Bacteria | Candidatus Endobugula sertula | 1 |
| Bacteria | Pseudomonas mendocina ymp | 2 |
| Bacteria | Lactobacillus crispatus CTV-05 | 3 |
| Bacteria | Streptococcus agalactiae NEM316 | 2 |
| Bacteria | Atopobium parvulum DSM 20469 | 4 |
| Environmental samples | [Ruminococcus] torques CAG:61 | 3 |
| Bacteria | Thiomonas sp. X19 | 1 |
| Bacteria | Verrucomicrobiae bacterium Tous-C5FEB | 1 |
| Bacteria | Rhizobium sp. NT-26 | 1 |
| Bacteria | Bavariicoccus seileri | 5 |
| Bacteria | Brevundimonas vesicularis | 1 |
| Bacteria | Caulobacter vibrioides NA1000 | 1 |
| Bacteria | Schlegelella thermodepolymerans | 1 |
| Bacteria | Rhodobacteraceae bacterium HLUCCO18 | 1 |
| Bacteria | Eubacterium ventriosum ATCC 27560 | 9 |
| Bacteria | Paracoccus sp. 228 | 1 |
| Bacteria | Kosakonia cowanii | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG08_land_8_20_14_0_20_41_16 | 1 |
| Bacteria | Paenibacillus sp. AR247 | 1 |
| Bacteria | Pseudohongiella spirulinae | 1 |
| Bacteria | Curtobacterium sp. MMLR14_010 | 1 |
| Bacteria | Mycolicibacterium brisbanense | 1 |
| Bacteria | Actinomyces sp. oral taxon 848 str. F0332 | 1 |
| Environmental samples | Roseburia sp. CAG:45 | 1 |
| Bacteria | Gemmatimonadetes bacterium 13_2_20CM_2_69_23 | 2 |
| Bacteria | Chlorobi bacterium OLB4 | 1 |
| Bacteria | Treponema denticola SP23 | 1 |
| Bacteria | Lysobacter sp. A03 | 1 |
| Bacteria | Neorhizobium galegae bv. officinalis | 2 |
| Bacteria | Paenibacillus polymyxa | 2 |
| Bacteria | Pelagicola litorisediminis | 1 |
| Bacteria | Desulfobulbaceae bacterium | 1 |
| Bacteria | Citrobacter youngae | 2 |
| Bacteria | Thermofilum adornatus | 1 |
| Bacteria | Ectothiorhodospira sp. PHS-1 | 1 |
| Bacteria | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11 | 1 |
| Bacteria | Escherichia coli O111:NM | 3 |
| Bacteria | Chlamydia sp. 2742-308 | 2 |
| Bacteria | Hylemonella gracilis str. Niagara R | 1 |
| Bacteria | Photorhabdus namnaonensis | 1 |
| Environmental samples | [Ruminococcus] gnavus CAG:126 | 1 |
| Bacteria | Elusimicrobia bacterium RIFOXYA2_FULL_39_19 | 1 |
| Bacteria | Shewanella chilikensis | 1 |
| Bacteria | Candidatus Competibacter denitrificans Run_A_D11 | 2 |
| Bacteria | Sphingopyxis sp. SCN 67-31 | 1 |
| Bacteria | Gallionellales bacterium CG17_big_fil_post_rev_8_21_14_2_50_54_146 | 1 |
| Bacteria | Pantoea sp. GM01 | 1 |
| Bacteria | Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 | 1 |
| Bacteria | Nitrosomonas europaea ATCC 19718 | 1 |
| Bacteria | Klebsiella sp. LTGPAF-6F | 2 |
| Bacteria | Gordonia sp. KTR9 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.014.04.1.1 | 1 |
| Bacteria | Pseudomonas syringae pv. syringae SM | 2 |
| Bacteria | Anaeromyxobacter sp. RBG_16_69_14 | 2 |
| Bacteria | Bacillus sp. I-2 | 1 |
| Bacteria | Erysipelotrichaceae bacterium SG0102 | 1 |
| Bacteria | Burkholderia stagnalis | 1 |
| Environmental samples | uncultured Citrobacter sp. | 4 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20 | 1 |
| Bacteria | Erythrobacter atlanticus | 1 |
| Bacteria | Verrucomicrobia bacterium A1 | 3 |
| Bacteria | Geobacter bemidjiensis Bem | 1 |
| Bacteria | Burkholderiales bacterium 68-10 | 1 |
| Bacteria | Thiotrichaceae bacterium | 1 |
| Bacteria | Sphaerisporangium sp. 7K107 | 2 |
| Bacteria | Oligella urethralis DNF00040 | 1 |
| Invertebrates | Anopheles arabiensis | 1 |
| Bacteria | Sunxiuqinia dokdonensis | 1 |
| Bacteria | Streptomonospora alba | 1 |
| Bacteria | Candidatus Latescibacteria bacterium 4484_181 | 2 |
| Bacteria | Vibrio jasicida | 1 |
| Bacteria | Massilia sp. NR 4-1 | 1 |
| Invertebrates | Acyrthosiphon pisum | 2 |
| Bacteria | Cellulomonas carbonis T26 | 1 |
| Bacteria | Coraliomargarita sp. WN38 | 2 |
| Bacteria | Streptomyces sp. 69 | 1 |
| Bacteria | Francisella sp. TX077310 | 1 |
| Invertebrates | Anopheles albimanus | 1 |
| Bacteria | Caulobacter sp. FWC2 | 1 |
| Bacteria | Mitsuaria sp. PDC51 | 1 |
| Bacteria | halophilic archaeon | 1 |
| Bacteria | Sphingomonas taxi | 2 |
| Bacteria | Pantoea sp. BRM17 | 1 |
| Bacteria | Cystobacter fuscus | 1 |
| Bacteria | Candidatus Fukatsuia symbiotica | 2 |
| Bacteria | Spirochaetes bacterium GWF1_41_5 | 2 |
| Bacteria | Acidithiobacillus sp. CJ-2 | 1 |
| Bacteria | Mycolicibacterium conceptionense | 1 |
| Bacteria | Methylobacterium sp. 17Sr1-1 | 1 |
| Bacteria | Thiobacillus denitrificans | 1 |
| Bacteria | Amycolatopsis mediterranei S699 | 1 |
| Bacteria | Pseudomonas sp. FeS53a | 2 |
| Bacteria | Conchiformibius steedae | 1 |
| Bacteria | Brevundimonas sp. Root1279 | 1 |
| Bacteria | Paenibacillus sp. DXL2 | 3 |
| Bacteria | Geobacter sp. M18 | 1 |
| Bacteria | Hyphomonadaceae bacterium BRH_c29 | 1 |
| Bacteria | Megasphaera sp. BV3C16-1 | 1 |
| Bacteria | Desulfonauticus submarinus | 1 |
| Bacteria | Idiomarina xiamenensis 10-D-4 | 1 |
| Bacteria | Planctomycetes bacterium GWF2_39_10 | 1 |
| Bacteria | Planctomycetes bacterium RIFCSPHIGHO2_02_FULL_52_58 | 1 |
| Bacteria | Oceanospirillales bacterium LUC14_002_19_P2 | 1 |
| Bacteria | Pseudomonas rhizosphaerae | 2 |
| Bacteria | Desulfobacula sp. RIFOXYA12_FULL_46_16 | 2 |
| Bacteria | Bacillus selenatarsenatis SF-1 | 1 |
| Bacteria | Epulopiscium sp. Nele67-Bin005 | 3 |
| Bacteria | Lysinibacillus sp. FJAT-14222 | 1 |
| Bacteria | [Clostridium] thermoalcaliphilum | 1 |
| Bacteria | Enterococcus faecalis ERV129 | 2 |
| Bacteria | Rhodococcus sp. 15-1154-1 | 1 |
| Bacteria | Phenylobacterium sp. SCN 70-31 | 1 |
| Bacteria | Corynebacterium sp. HMSC08D02 | 1 |
| Bacteria | Enterobacter sichuanensis | 2 |
| Bacteria | Lutibaculum baratangense AMV1 | 1 |
| Bacteria | Cystobacter fuscus DSM 2262 | 4 |
| Bacteria | Polynucleobacter meluiroseus | 1 |
| Bacteria | Henriciella sp. | 1 |
| Bacteria | Clostridium sp. AF34-13 | 1 |
| Bacteria | Paenibacillus amylolyticus | 1 |
| Bacteria | Yoonia maricola | 1 |
| Bacteria | Roseovarius lutimaris | 1 |
| Bacteria | Neorhizobium galegae bv. orientalis str. HAMBI 540 | 1 |
| Bacteria | Planctomycetales bacterium 4484_123 | 4 |
| Bacteria | Devosia sp. M6-77 | 2 |
| Bacteria | Streptomyces variegatus | 1 |
| Bacteria | Massilimicrobiota sp. An105 | 1 |
| Bacteria | Novosphingobium guangzhouense | 1 |
| Bacteria | Zetaproteobacteria bacterium CG1_02_53_45 | 1 |
| Bacteria | Neisseria sp. 10023 | 1 |
| Bacteria | Cutibacterium avidum ATCC 25577 | 3 |
| Bacteria | Rhodobium orientis | 1 |
| Bacteria | Pseudoalteromonas sp. meg-B1 | 1 |
| Bacteria | Arthrobacter saudimassiliensis | 2 |
| Bacteria | Rothia dentocariosa ATCC 17931 | 1 |
| Bacteria | Morganella morganii subsp. morganii | 2 |
| Bacteria | Clostridioides difficile NAP08 | 1 |
| Bacteria | Fusibacter sp. 3D3 | 1 |
| Bacteria | bacterium ADurb.Bin431 | 3 |
| Bacteria | Candidatus Accumulibacter sp. SK-02 | 1 |
| Bacteria | Tangfeifania diversioriginum | 1 |
| Bacteria | Yersinia wautersii | 2 |
| Bacteria | Lactococcus lactis subsp. cremoris GE214 | 1 |
| Bacteria | Halomonas nitroreducens | 2 |
| Bacteria | Brevundimonas sp. Leaf363 | 1 |
| Bacteria | Enterococcus casseliflavus 14-MB-W-14 | 1 |
| Bacteria | Bacillus hemicellulosilyticus JCM 9152 | 3 |
| Bacteria | Megasphaera sp. DISK 18 | 4 |
| Bacteria | Ralstonia solanacearum Po82 | 1 |
| Bacteria | Streptomyces pharetrae CZA14 | 1 |
| Bacteria | Geobacter sp. | 1 |
| Bacteria | Enterobacter sp. NFR05 | 1 |
| Bacteria | Geothermobacter sp. EPR-M | 2 |
| Bacteria | Marininema halotolerans | 2 |
| Bacteria | Glaciecola sp. KUL10 | 1 |
| Bacteria | Chlamydia abortus | 3 |
| Bacteria | Holdemanella biformis DSM 3989 | 3 |
| Bacteria | Chlamydia trachomatis A/HAR-13 | 2 |
| Bacteria | Phaeobacter piscinae | 1 |
| Bacteria | Enterobacter sp. BIDMC92 | 1 |
| Bacteria | Legionella rubrilucens | 1 |
| Bacteria | Bosea thiooxidans | 2 |
| Bacteria | Burkholderia sp. AU4i | 2 |
| Bacteria | Streptomyces sp. MMG1533 | 2 |
| Bacteria | Opitutaceae bacterium | 2 |
| Bacteria | Halodesulfovibrio spirochaetisodalis | 1 |
| Bacteria | Aestuariibacter aggregatus | 1 |
| Bacteria | Clostridium autoethanogenum DSM 10061 | 2 |
| Bacteria | Turicibacter sp. H121 | 1 |
| Bacteria | Azospirillum sp. 47_25 | 1 |
| Bacteria | Halomonas arcis | 2 |
| Bacteria | Altererythrobacter xiamenensis | 1 |
| Bacteria | Blastopirellula cremea | 2 |
| Bacteria | Plesiomonas shigelloides 302-73 | 1 |
| Bacteria | Janthinobacterium sp. 67 | 1 |
| Bacteria | Chromohalobacter salexigens DSM 3043 | 2 |
| Bacteria | Hydrogenophilales bacterium CG18_big_fil_WC_8_21_14_2_50_58_12 | 1 |
| Bacteria | Actinomyces bowdenii | 1 |
| Bacteria | Sorangium cellulosum So0157-2 | 1 |
| Bacteria | Bacillus velezensis UCMB5033 | 1 |
| Bacteria | [Bacteroides] pectinophilus ATCC 43243 | 1 |
| Bacteria | Simkania negevensis Z | 2 |
| Bacteria | Ruminococcus sp. AM16-34 | 1 |
| Bacteria | Halioglobus sp. HI00S01 | 1 |
| Bacteria | Candidatus Promineofilum breve | 1 |
| Bacteria | Spiroplasma cantharicola | 3 |
| Bacteria | Alteromonas sp. | 3 |
| Bacteria | gamma proteobacterium BDW918 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_58_19 | 1 |
| Bacteria | Elusimicrobia bacterium GWC2_61_19 | 1 |
| Bacteria | Anaerolineae bacterium 49_20 | 1 |
| Bacteria | Nitratireductor aquibiodomus RA22 | 2 |
| Bacteria | Alphaproteobacteria bacterium TMED109 | 1 |
| Environmental samples | Streptococcus thermophilus CAG:236 | 1 |
| Bacteria | Anaerolineaceae bacterium | 2 |
| Bacteria | Jeotgalibacillus campisalis | 3 |
| Bacteria | Roseovarius aestuarii | 1 |
| Bacteria | Mycoplasma hyopneumoniae 7422 | 1 |
| Bacteria | Tsukamurella pseudospumae | 1 |
| Bacteria | Coprococcus sp. HPP0074 | 1 |
| Bacteria | Streptomyces sp. San01 | 1 |
| Bacteria | Magnetospira sp. QH-2 | 1 |
| Bacteria | Mycolicibacterium smegmatis MKD8 | 1 |
| Bacteria | Enhygromyxa salina | 2 |
| Bacteria | Roseovarius indicus | 1 |
| Bacteria | Salinimonas sp. N102 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.11.2.1 | 1 |
| Bacteria | Nitrosomonas sp. Nm143 | 1 |
| Bacteria | Bartonella clarridgeiae 73 | 1 |
| Bacteria | Methylobacterium sp. ap11 | 2 |
| Bacteria | Halothiobacillus sp. XI15 | 1 |
| Bacteria | Paenibacillus sp. FSL R7-0337 | 1 |
| Bacteria | Streptomyces abyssalis | 2 |
| Bacteria | actinobacterium acMicro-4 | 1 |
| Bacteria | Staphylococcus fleurettii | 2 |
| Bacteria | Desulfobacteraceae bacterium 4484_190.2 | 1 |
| Bacteria | Sinorhizobium sp. CCBAU 05631 | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_01_FULL_45_74 | 1 |
| Bacteria | Mycolicibacterium tusciae | 1 |
| Bacteria | Nonomuraea solani | 1 |
| Bacteria | Phenylobacterium deserti | 1 |
| Bacteria | Deltaproteobacteria bacterium GWA2_54_12 | 1 |
| Bacteria | Escherichia coli H461 | 2 |
| Bacteria | Sphingomonas paucimobilis NBRC 13935 | 2 |
| Bacteria | Shigella flexneri 1485-80 | 3 |
| Bacteria | Desulfovibrio vulgaris RCH1 | 1 |
| Bacteria | Burkholderia sp. H160 | 1 |
| Bacteria | Pseudomonas sp. URIL14HWK12:I2 | 1 |
| Bacteria | Pediococcus inopinatus | 1 |
| Bacteria | Leucobacter sp. Ag1 | 1 |
| Bacteria | Escherichia coli chi7122 | 2 |
| Bacteria | Neisseria gonorrhoeae MIA_2011_03-10 | 1 |
| Environmental samples | Firmicutes bacterium CAG:536 | 1 |
| Bacteria | Streptococcus suis D12 | 1 |
| Bacteria | Yersinia kristensenii | 2 |
| Bacteria | Pseudomonadales bacterium RIFCSPLOWO2_12_59_9 | 1 |
| Bacteria | Hyphomicrobiaceae bacterium TMED74 | 1 |
| Bacteria | Gallionellales bacterium CG_4_9_14_0_8_um_filter_59_50 | 1 |
| Bacteria | Alphaproteobacteria bacterium 46_93_T64 | 1 |
| Bacteria | Haloarcula taiwanensis | 1 |
| Bacteria | Streptomyces sp. CB01373 | 1 |
| Bacteria | Cardiobacterium hominis ATCC 15826 | 3 |
| Bacteria | Finegoldia magna ATCC 29328 | 2 |
| Bacteria | Vibrio lentus | 1 |
| Bacteria | Photobacterium sanguinicancri | 2 |
| Bacteria | Pelagibacteraceae bacterium TMED65 | 1 |
| Bacteria | Escherichia coli TA280 | 1 |
| Bacteria | Spirochaetes bacterium ADurb.Bin315 | 1 |
| Bacteria | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_45_16 | 1 |
| Bacteria | Leifsonia sp. 21MFCrub1.1 | 1 |
| Bacteria | Thioclava sp. JM3 | 1 |
| Bacteria | Pseudogulbenkiania ferrooxidans EGD-HP2 | 2 |
| Bacteria | Clostridium diolis | 3 |
| Bacteria | Corynebacterium argentoratense DSM 44202 | 1 |
| Bacteria | Comamonadaceae bacterium NML180581 | 1 |
| Bacteria | Streptomyces pratensis ATCC 33331 | 1 |
| Bacteria | Brevundimonas sp. MYb31 | 1 |
| Bacteria | Aliivibrio logei | 2 |
| Bacteria | Arthrobacter sp. Edens01 | 2 |
| Bacteria | Marinococcus halophilus | 2 |
| Bacteria | Sulfitobacter guttiformis | 1 |
| Bacteria | Mycoplasma mycoides subsp. capri str. GM12 | 1 |
| Bacteria | Comamonadaceae bacterium CG_4_9_14_3_um_filter_60_33 | 1 |
| Bacteria | Rhizobiales bacterium PAR1 | 1 |
| Bacteria | Rhodococcus kyotonensis | 1 |
| Bacteria | Omnitrophica bacterium RIFCSPLOWO2_12_FULL_44_17 | 1 |
| Bacteria | Bartonella sp. WD16.2 | 1 |
| Bacteria | Geodermatophilus sp. LHW52908 | 2 |
| Bacteria | Erythrobacter longus | 1 |
| Bacteria | Paenibacillus beijingensis | 1 |
| Bacteria | Flavonifractor sp. An52 | 1 |
| Bacteria | Bartonella doshiae | 1 |
| Bacteria | Rhodopseudomonas pentothenatexigens | 1 |
| Bacteria | Rubinisphaera brasiliensis DSM 5305 | 2 |
| Bacteria | Pseudoalteromonas sp. BSi20429 | 1 |
| Bacteria | Legionella oakridgensis ATCC 33761 = DSM 21215 | 1 |
| Bacteria | Arthrobacter sp. ov118 | 1 |
| Bacteria | Xanthomonas axonopodis pv. manihotis str. CIO151 | 1 |
| Bacteria | Mycobacterium sp. Root265 | 1 |
| Bacteria | Clostridium carnis | 1 |
| Bacteria | Brevundimonas sp. DS20 | 1 |
| Bacteria | bacterium D16-54 | 1 |
| Bacteria | Buchnera aphidicola str. USDA (Myzus persicae) | 1 |
| Bacteria | Mycolicibacterium sp. (ex Dasyatis americana) | 1 |
| Bacteria | Sodalis endosymbiont of Henestaris halophilus | 1 |
| Bacteria | Brevundimonas sp. GW460-12-10-14-LB2 | 1 |
| Bacteria | Azoarcus sp. KH32C | 1 |
| Bacteria | Aquamicrobium defluvii | 2 |
| Bacteria | Arthrobacter sp. Hiyo6 | 1 |
| Bacteria | Ochrobactrum intermedium 229E | 1 |
| Bacteria | Lactobacillus sp. CBA3605 | 1 |
| Bacteria | Candidatus Westeberhardia cardiocondylae | 1 |
| Bacteria | Alphaproteobacteria bacterium PA4 | 1 |
| Bacteria | Clostridium sp. AF29-8BH | 1 |
| Bacteria | Tsukamurella paurometabola DSM 20162 | 1 |
| Bacteria | Sphingomonas sp. MM-1 | 1 |
| Bacteria | Rhizobium sp. AAP116 | 1 |
| Plants and Fungi | Emiliania huxleyi | 1 |
| Bacteria | Sphingomonas sp. Leaf28 | 1 |
| Bacteria | Marinobacter sp. ANT_B65 | 1 |
| Bacteria | Alteromonas macleodii str. 'Balearic Sea AD45' | 1 |
| Bacteria | Candidatus Marinimicrobia bacterium ADurb.Bin030 | 1 |
| Bacteria | Edwardsiella ictaluri 93-146 | 1 |
| Bacteria | Magnetospirillum sp. ME-1 | 1 |
| Bacteria | Omnitrophica bacterium GWA2_41_15 | 1 |
| Bacteria | Candidatus Arsenophonus lipoptenae | 1 |
| Bacteria | Burkholderia gladioli | 1 |
| Bacteria | Domibacillus mangrovi | 1 |
| Bacteria | Moorella thermoacetica Y72 | 1 |
| Bacteria | Rhizobium leguminosarum bv. trifolii | 1 |
| Bacteria | Octadecabacter arcticus 238 | 1 |
| Bacteria | Xanthobacter sp. 17-67-6 | 1 |
| Bacteria | Peptoniphilus lacrimalis | 1 |
| Bacteria | Polaromonas naphthalenivorans CJ2 | 1 |
| Bacteria | Betaproteobacteria bacterium 13_1_40CM_4_64_4 | 1 |
| Bacteria | Hydrogenophilales bacterium 17-64-34 | 1 |
| Bacteria | Burkholderia pseudomallei MSHR2543 | 1 |
| Bacteria | Corynebacterium sp. NML 120412 | 1 |
| Bacteria | Maricaulis salignorans | 1 |
| Bacteria | Deltaproteobacteria bacterium ADurb.Bin026 | 2 |
| Bacteria | Mesorhizobium delmotii | 1 |
| Bacteria | Maricaulis sp. | 3 |
| Bacteria | Anaerosporobacter mobilis DSM 15930 | 1 |
| Bacteria | Actibacterium mucosum KCTC 23349 | 1 |
| Bacteria | Nitrospirae bacterium CG_4_9_14_0_8_um_filter_70_14 | 1 |
| Bacteria | Fusobacteriales bacterium | 1 |
| Bacteria | Candidatus Accumulibacter sp. SK-11 | 1 |
| Bacteria | Chloroflexus islandicus | 1 |
| Bacteria | Candidatus Fischerbacteria bacterium RBG_13_37_8 | 1 |
| Bacteria | Microbispora triticiradicis | 1 |
| Bacteria | Faecalibacterium prausnitzii M21/2 | 2 |
| Bacteria | Bacillus zhangzhouensis | 1 |
| Bacteria | Tatumella citrea | 1 |
| Bacteria | Desulfovibrio africanus str. Walvis Bay | 1 |
| Bacteria | Marinomonas sp. MED121 | 1 |
| Bacteria | Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 | 1 |
| Invertebrates | Echinococcus multilocularis | 4 |
| Bacteria | Proteobacteria bacterium HN_bin10 | 1 |
| Bacteria | Thalassobius gelatinovorus | 1 |
| Bacteria | Lactobacillus crispatus EM-LC1 | 1 |
| Bacteria | Spongiibacter sp. IMCC21906 | 1 |
| Bacteria | Methylovirgula sp. 4M-Z18 | 1 |
| Bacteria | Cryobacterium psychrotolerans | 1 |
| Bacteria | Amylibacter kogurei | 1 |
| Bacteria | Pseudomonas entomophila L48 | 1 |
| Bacteria | Streptomyces sp. HG99 | 1 |
| Bacteria | Thalassobius mediterraneus | 1 |
| Bacteria | Phormidesmis priestleyi Ana | 1 |
| Bacteria | Burkholderiales bacterium 70-64 | 1 |
| Bacteria | Henriciella algicola | 1 |
| Bacteria | Stigmatella erecta | 1 |
| Bacteria | Roseivivax halotolerans | 1 |
| Bacteria | Paenibacillus polymyxa E681 | 1 |
| Environmental samples | Akkermansia muciniphila CAG:154 | 1 |
| Bacteria | Sphingomonas sp. S6-262 | 1 |
| Bacteria | Bacillus coagulans 2-6 | 1 |
| Bacteria | Butyrivibrio fibrisolvens 16/4 | 1 |
| Bacteria | Streptococcus viridans | 1 |
| Bacteria | Nitrospirae bacterium GWC2_56_14 | 1 |
| Bacteria | Rhodococcus sp. PBTS 1 | 1 |
| Bacteria | Deltaproteobacteria bacterium CG_4_8_14_3_um_filter_51_11 | 1 |
| Bacteria | Candidatus Accumulibacter sp. SK-12 | 1 |
| Bacteria | Nitrosomonas nitrosa | 1 |
| Bacteria | Pseudomonas sp. FW305-E2 | 1 |
| Bacteria | Streptomyces sp. 1121.2 | 1 |
| Bacteria | Nonomuraea maritima | 1 |
| Bacteria | Actinobacillus suis H91-0380 | 1 |
| Bacteria | Neorhizobium sp. NCHU2750 | 1 |
| Bacteria | Lactobacillus sp. ESL0260 | 1 |
| Bacteria | Streptomyces sp. ADI96-15 | 1 |
| Bacteria | Erythrobacter gangjinensis | 1 |
| Bacteria | Alishewanella agri BL06 | 1 |
| Bacteria | Alteromonas lipolytica | 1 |
| Bacteria | Robinsoniella sp. RHS | 1 |
| Bacteria | Solimonas fluminis | 1 |
| Bacteria | Mesorhizobium sp. WSM4308 | 1 |
| Bacteria | Extensimonas vulgaris | 1 |
| Bacteria | Streptomyces avermitilis MA-4680 = NBRC 14893 | 1 |
| Bacteria | Bacillus sp. AFS031507 | 1 |
| Bacteria | Syntrophus sp. GWC2_56_31 | 1 |
| Bacteria | Streptomyces lavendulae subsp. lavendulae | 1 |
| Bacteria | Pseudomonas sp. 1239 | 1 |
| Bacteria | Sphingobium hydrophobicum | 1 |
| Bacteria | Alteromonas naphthalenivorans | 1 |
| Bacteria | Paenibacillus sp. FSL R7-0273 | 1 |
| Bacteria | Corynebacterium sp. DNF00584 | 1 |
| Bacteria | Moorella thermoacetica | 1 |
| Bacteria | Altererythrobacter sp. HME9302 | 1 |
| Bacteria | Flexistipes sinusarabici DSM 4947 | 1 |
| Bacteria | Agrobacterium sp. ATCC 31749 | 1 |
| Bacteria | Actinomadura mexicana | 1 |
| Bacteria | Marinobacter sp. LV10R510-11A | 1 |
| Bacteria | Serratia symbiotica SCt-VLC | 1 |
| Bacteria | Magnetospirillum moscoviense | 1 |
| Bacteria | Kiloniella litopenaei | 1 |
| Bacteria | Escherichia coli D9 | 1 |
| Bacteria | Enterobacter cloacae complex sp. | 1 |
| Bacteria | Salipiger thiooxidans | 1 |
| Bacteria | Thiomonas sp. CB2 | 1 |
| Bacteria | Francisella tularensis subsp. novicida U112 | 1 |
| Bacteria | Gryllotalpicola sp. 2DFW10M-5 | 1 |
| Bacteria | Pseudomonas syringae pv. ribicola | 1 |
| Bacteria | Actinoplanes regularis | 1 |
| Bacteria | Rhodococcus erythropolis PR4 | 1 |
| Bacteria | Lactobacillus gastricus PS3 | 1 |
| Bacteria | Leptospira interrogans serovar Copenhageni str. LT2050 | 1 |
| Bacteria | Clostridium botulinum C/D str. DC5 | 1 |
| Bacteria | Ahniella affigens | 1 |
| Bacteria | Lactobacillus algidus | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_43_16 | 1 |
| Bacteria | Pseudomonas saudimassiliensis | 1 |
| Bacteria | Rhodobacteraceae bacterium HLUCCO07 | 1 |
| Bacteria | Oleibacter sp. | 1 |
| Bacteria | Actinomyces liubingyangii | 1 |
| Bacteria | Pectobacterium fontis | 1 |
| Bacteria | Desulfobacteraceae bacterium | 1 |
| Bacteria | Kaistia soli DSM 19436 | 1 |
| Bacteria | Leptospira ryugenii | 1 |
| Bacteria | Hydrogenophilales bacterium RIFOXYA1_FULL_63_33 | 1 |
| Bacteria | Marinomonas ushuaiensis DSM 15871 | 1 |
| Bacteria | Sphingomonas sp. Leaf20 | 1 |
| Bacteria | Spongiibacter sp. | 2 |
| Vertebrates | Fundulus heteroclitus | 86 |
| Bacteria | Agromyces flavus | 4 |
| Bacteria | Corynebacterium mustelae | 2 |
| Mammals | Capra hircus | 24 |
| Invertebrates | Lepeophtheirus salmonis | 9 |
| Vertebrates | Seriola lalandi dorsalis | 34 |
| Bacteria | Duganella phyllosphaerae | 1 |
| Bacteria | Staphylococcus aureus C0673 | 10 |
| Bacteria | Alkaliphilus metalliredigens QYMF | 3 |
| Bacteria | Terribacillus goriensis | 6 |
| Bacteria | Caldanaerobacter subterraneus subsp. pacificus DSM 12653 | 1 |
| Bacteria | Microbacterium sp. Root53 | 3 |
| Bacteria | Collinsella stercoris DSM 13279 | 5 |
| Bacteria | Escherichia coli DEC2C | 4 |
| Bacteria | Lactobacillus rhamnosus LRHMDP2 | 17 |
| Bacteria | Prosthecochloris sp. ZM | 1 |
| Bacteria | Alphaproteobacteria bacterium WS11 | 1 |
| Bacteria | Burkholderia contaminans | 1 |
| Bacteria | Melioribacter roseus P3M-2 | 2 |
| Bacteria | Pediococcus acidilactici | 11 |
| Bacteria | Escherichia coli 1303 | 9 |
| Bacteria | Lactobacillus amylotrophicus DSM 20534 | 2 |
| Bacteria | Roseburia sp. OF03-24 | 1 |
| Bacteria | Aeromonas schubertii | 11 |
| Bacteria | Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 | 9 |
| Bacteria | Elusimicrobia bacterium | 13 |
| Bacteria | Clostridium neonatale | 7 |
| Vertebrates | Oreochromis niloticus | 26 |
| Bacteria | Escherichia coli LAU-EC10 | 4 |
| Bacteria | Nitrosococcus halophilus Nc 4 | 1 |
| Bacteria | Vibrio proteolyticus NBRC 13287 | 5 |
| Bacteria | Leifsonia sp. SCN 70-46 | 2 |
| Vertebrates | Mola mola | 24 |
| Bacteria | Lactobacillus paracasei ATCC 334 | 12 |
| Bacteria | Terribacillus halophilus | 11 |
| Bacteria | Methylobacterium tarhaniae | 2 |
| Bacteria | Enterococcus sp. RIT-PI-f | 5 |
| Bacteria | Desulfobacteraceae bacterium 4484_190.1 | 3 |
| Bacteria | Citrobacter koseri | 10 |
| Vertebrates | Ictalurus punctatus | 38 |
| Bacteria | Treponema azotonutricium ZAS-9 | 6 |
| Environmental samples | Ruminococcus sp. CAG:254 | 1 |
| Bacteria | Streptococcus sp. DD11 | 5 |
| Bacteria | Desulfovibrio gilichinskyi | 2 |
| Bacteria | Neochlamydia sp. EPS4 | 1 |
| Bacteria | Tatlockia micdadei | 1 |
| Mammals | Ursus arctos horribilis | 26 |
| Bacteria | Streptomyces nanshensis | 2 |
| Vertebrates | Haplochromis burtoni | 44 |
| Bacteria | Xenorhabdus vietnamensis | 4 |
| Bacteria | Yersinia pestis | 13 |
| Bacteria | Enterovibrio norvegicus DSM 15893 | 3 |
| Bacteria | Photobacterium damselae | 4 |
| Bacteria | Trichococcus sp. ES5 | 4 |
| Environmental samples | Clostridium sp. CAG:169 | 1 |
| Bacteria | Streptomyces rubellomurinus | 1 |
| Bacteria | Escherichia coli DEC1D | 4 |
| Bacteria | Salmonella enterica subsp. arizonae serovar 62:z4,z23:- | 9 |
| Bacteria | Enterococcus faecalis DAPTO 516 | 9 |
| Bacteria | Chlorobium ferrooxidans DSM 13031 | 3 |
| Bacteria | Syntrophorhabdus sp. PtaB.Bin027 | 1 |
| Primates | Nomascus leucogenys | 37 |
| Bacteria | Enterococcus faecalis ERV37 | 2 |
| Bacteria | Armatimonadetes bacterium RBG_19FT_COMBO_69_19 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar 43:a:1,7 | 2 |
| Invertebrates | Trichinella britovi | 18 |
| Bacteria | Listeria monocytogenes 10403S | 11 |
| Bacteria | Mycetocola miduiensis | 3 |
| Bacteria | Pseudomonas mucidolens | 3 |
| Bacteria | Zhizhongheella caldifontis | 1 |
| Bacteria | Alkalibacter saccharofermentans DSM 14828 | 15 |
| Bacteria | Dickeya paradisiaca Ech703 | 4 |
| Bacteria | Magnetovibrio sp. | 6 |
| Bacteria | Pandoraea apista | 1 |
| Bacteria | Staphylococcus lutrae | 5 |
| Bacteria | Chlamydia trachomatis A2497 | 1 |
| Bacteria | Streptomyces globisporus | 1 |
| Bacteria | Gracilibacillus ureilyticus | 5 |
| Bacteria | Solobacterium moorei F0204 | 10 |
| Bacteria | Virgibacillus necropolis | 14 |
| Bacteria | Salmonella enterica subsp. enterica serovar Dublin str. UC16 | 4 |
| Bacteria | Yersinia frederiksenii | 4 |
| Bacteria | Ignavibacteria bacterium CG_4_9_14_0_2_um_filter_37_13 | 3 |
| Bacteria | Cellulomonadaceae bacterium TMED98 | 1 |
| Bacteria | Bifidobacterium breve DSM 20213 = JCM 1192 | 3 |
| Vertebrates | Gallus gallus | 28 |
| Bacteria | Thiomonas sp. 14-64-326 | 1 |
| Invertebrates | Lasius niger | 3 |
| Bacteria | Eubacterium aggregans | 5 |
| Bacteria | Caldibacillus debilis | 12 |
| Bacteria | Anaerococcus hydrogenalis DSM 7454 | 3 |
| Bacteria | Methylovirgula ligni | 2 |
| Bacteria | Smithella sp. PtaU1.Bin162 | 2 |
| Bacteria | Vibrio caribbeanicus ATCC BAA-2122 | 5 |
| Bacteria | Enterobacteriaceae bacterium S05 | 6 |
| Bacteria | Kocuria marina | 1 |
| Vertebrates | Monopterus albus | 36 |
| Bacteria | Streptococcus pantholopis | 17 |
| Bacteria | Planomicrobium glaciei | 5 |
| Bacteria | Vibrio sp. 10N.261.52.A1 | 1 |
| Bacteria | Lentisphaeria bacterium | 11 |
| Primates | Aotus nancymaae | 31 |
| Bacteria | Sneathiella sp. | 2 |
| Bacteria | Bacillus atrophaeus | 5 |
| Mammals | Camelus ferus | 9 |
| Bacteria | Geomicrobium sp. JCM 19039 | 7 |
| Bacteria | Paraliobacillus ryukyuensis | 10 |
| Mammals | Ailuropoda melanoleuca | 11 |
| Bacteria | Clostridium sp. SS2/1 | 15 |
| Bacteria | Neisseria meningitidis ATCC 13091 | 1 |
| Bacteria | Rhizobium sp. Root482 | 2 |
| Bacteria | Klebsiella pneumoniae subsp. ozaenae | 11 |
| Bacteria | Chlamydiales bacterium SCGC AG-110-M15 | 2 |
| Bacteria | Kineococcus rhizosphaerae | 1 |
| Bacteria | Shigella flexneri K-315 | 3 |
| Bacteria | Pseudomonas sp. MWU13-2860 | 6 |
| Bacteria | Moritella viscosa | 5 |
| Bacteria | Pontibacillus litoralis JSM 072002 | 2 |
| Bacteria | Pectobacterium aquaticum | 5 |
| Bacteria | Romboutsia weinsteinii | 8 |
| Bacteria | Balneola sp. | 7 |
| Bacteria | Mariprofundus ferrooxydans PV-1 | 1 |
| Bacteria | Geoalkalibacter ferrihydriticus | 2 |
| Mammals | Vulpes vulpes | 24 |
| Bacteria | Leptolyngbya valderiana BDU 20041 | 3 |
| Bacteria | Erythrobacter sp. SG61-1L | 1 |
| Bacteria | bacterium ADurb.Bin478 | 4 |
| Bacteria | Paenarthrobacter nicotinovorans | 2 |
| Vertebrates | Anguilla japonica | 1 |
| Bacteria | Rubrivirga sp. SAORIC476 | 3 |
| Bacteria | Bacillus cavernae | 3 |
| Bacteria | Elusimicrobia bacterium RIFCSPLOWO2_12_FULL_39_28 | 1 |
| Bacteria | bacterium M21 | 2 |
| Vertebrates | Seriola dumerili | 30 |
| Bacteria | Salmonella enterica subsp. enterica serovar Agona | 6 |
| Bacteria | Sphingobacterium faecium PCAi_F2.5 | 11 |
| Bacteria | Leptotrichia sp. oral taxon 215 str. W9775 | 9 |
| Vertebrates | Austrofundulus limnaeus | 35 |
| Bacteria | Micrococcales bacterium 32-70-13 | 3 |
| Bacteria | Rathayibacter sp. Leaf299 | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Urbana str. R8-2977 | 2 |
| Bacteria | [Clostridium] celerecrescens 18A | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Moero | 4 |
| Bacteria | Shigella dysenteriae 1012 | 2 |
| Bacteria | Photobacterium aphoticum | 19 |
| Bacteria | Lactobacillus perolens DSM 12744 | 7 |
| Invertebrates | Schmidtea mediterranea | 8 |
| Bacteria | Cellulosilyticum lentocellum DSM 5427 | 1 |
| Bacteria | Clostridioides difficile CD196 | 7 |
| Bacteria | Vibrio aerogenes CECT 7868 | 8 |
| Bacteria | Gammaproteobacteria bacterium BRH_c0 | 1 |
| Bacteria | Clostridium sp. NJ4 | 3 |
| Bacteria | Pseudomonas oleovorans | 2 |
| Bacteria | Arthrobacter sp. YN | 1 |
| Bacteria | Vibrio cholerae | 24 |
| Bacteria | Serratia ficaria | 6 |
| Bacteria | Sphingomonas sp. SRS2 | 1 |
| Bacteria | bacterium DOLZORAL124_64_63 | 2 |
| Invertebrates | Culex tarsalis | 5 |
| Bacteria | Coriobacterium glomerans PW2 | 20 |
| Bacteria | Anaerobacillus alkalilacustris | 10 |
| Bacteria | Fibrobacter sp. UWCM | 1 |
| Bacteria | Herbiconiux ginsengi | 3 |
| Bacteria | Bacillus stratosphericus LAMA 585 | 7 |
| Bacteria | Armatimonadetes bacterium 13_1_40CM_64_14 | 2 |
| Bacteria | Elusimicrobia bacterium CG08_land_8_20_14_0_20_51_18 | 2 |
| Bacteria | Myxococcales bacterium SG8_38_1 | 1 |
| Bacteria | Clostridium sp. MF28 | 3 |
| Bacteria | Rubellimicrobium mesophilum DSM 19309 | 1 |
| Bacteria | Pseudomonas flexibilis | 1 |
| Bacteria | Candidatus Hydrogenedentes bacterium CG1_02_42_14 | 1 |
| Bacteria | Psychrobacillus psychrotolerans | 5 |
| Bacteria | Streptococcus mutans | 20 |
| Bacteria | Lactobacillus mali | 8 |
| Bacteria | Mycolicibacterium rhodesiae NBB3 | 1 |
| Invertebrates | Helicoverpa armigera | 1 |
| Vertebrates | Oncorhynchus mykiss | 31 |
| Bacteria | Pediococcus stilesii | 5 |
| Bacteria | Enterococcus thailandicus | 17 |
| Bacteria | Thiorhodococcus drewsii AZ1 | 2 |
| Bacteria | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 | 2 |
| Bacteria | Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26 | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Alachua str. R6-377 | 2 |
| Bacteria | Parageobacillus caldoxylosilyticus | 5 |
| Bacteria | Enterococcus avium ATCC 14025 | 47 |
| Bacteria | Propionibacterium sp. JV5 | 6 |
| Bacteria | Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91 | 3 |
| Bacteria | Nocardiopsis flavescens | 1 |
| Invertebrates | Hydatigera taeniaeformis | 5 |
| Bacteria | Brenneria goodwinii | 7 |
| Bacteria | Candidatus Edwardsbacteria bacterium GWF2_54_11 | 4 |
| Bacteria | Streptococcus criceti HS-6 | 16 |
| Bacteria | Skermanella aerolata KACC 11604 | 4 |
| Bacteria | Olsenella sp. An293 | 5 |
| Bacteria | Paenibacillus sp. P22 | 1 |
| Bacteria | Lactobacillus zeae DSM 20178 = KCTC 3804 | 7 |
| Bacteria | Tetragenococcus muriaticus PMC-11-5 | 7 |
| Bacteria | Oceanicaulis sp. | 3 |
| Bacteria | Bacillus anthracis | 4 |
| Bacteria | Edwardsiella hoshinae | 2 |
| Bacteria | Bacillus sp. FJAT-27264 | 4 |
| Bacteria | Cereibacter changlensis JA139 | 1 |
| Bacteria | Aeromonas hydrophila 4AK4 | 5 |
| Bacteria | Microbacterium sp. GCS4 | 1 |
| Bacteria | Enterococcus sp. 6C8_DIV0013 | 12 |
| Bacteria | Clostridium algidicarnis DSM 15099 | 1 |
| Bacteria | Escherichia coli KTE66 | 3 |
| Bacteria | Sphingobium quisquiliarum P25 | 1 |
| Bacteria | [Clostridium] bolteae ATCC BAA-613 | 8 |
| Bacteria | Planctomycetes bacterium SM23_32 | 1 |
| Bacteria | Salmonella bongori NCTC 12419 | 2 |
| Bacteria | Clostridium sp. PI-S10-A1B | 9 |
| Bacteria | Candidatus Stoquefichus sp. KLE1796 | 10 |
| Bacteria | Methylophaga sp. 41_12_T18 | 1 |
| Bacteria | Pasteurella testudinis DSM 23072 | 4 |
| Bacteria | Limnohabitans planktonicus II-D5 | 1 |
| Bacteria | Absiella sp. AM09-45 | 25 |
| Bacteria | Bacillus sp. UMB0899 | 6 |
| Bacteria | Planococcus sp. Y42 | 4 |
| Bacteria | Bacillus sp. KQ-3 | 7 |
| Bacteria | Rhizobium etli CFN 42 | 1 |
| Bacteria | Escherichia coli B088 | 4 |
| Bacteria | Clostridium sp. KLE 1755 | 2 |
| Bacteria | Bacillus sp. FJAT-22090 | 1 |
| Bacteria | Enterococcus rivorum | 22 |
| Bacteria | Sinomonas humi | 3 |
| Bacteria | Streptomyces sp. WAC 01420 | 2 |
| Bacteria | Staphylococcus aureus subsp. aureus Mu50 | 8 |
| Bacteria | Nocardioides szechwanensis | 2 |
| Bacteria | Streptomyces hygroscopicus subsp. jinggangensis 5008 | 1 |
| Bacteria | Terribacillus aidingensis | 5 |
| Bacteria | Ignavibacterium album JCM 16511 | 2 |
| Bacteria | Alloactinosynnema album | 2 |
| Bacteria | Mycolicibacterium chubuense NBB4 | 1 |
| Bacteria | Photorhabdus temperata J3 | 1 |
| Bacteria | Bacillus sp. V47-23a | 4 |
| Bacteria | Brachyspira hyodysenteriae | 5 |
| Bacteria | Shigella flexneri | 22 |
| Bacteria | Pseudomonas fuscovaginae | 3 |
| Bacteria | Bacillus firmus DS1 | 3 |
| Bacteria | Clostridiaceae bacterium OM02-2AC | 50 |
| Invertebrates | Drosophila willistoni | 4 |
| Invertebrates | Trichinella sp. T6 | 19 |
| Plants and Fungi | Beauveria bassiana D1-5 | 7 |
| Bacteria | Shigella boydii 4444-74 | 3 |
| Bacteria | Bacillus sp. AFS098217 | 1 |
| Bacteria | Psychromonas ingrahamii 37 | 5 |
| Bacteria | Streptomyces sp. cf386 | 1 |
| Bacteria | Halomonadaceae bacterium | 2 |
| Bacteria | Rahnella sp. AA | 5 |
| Bacteria | Mesoplasma florum | 1 |
| Bacteria | Streptomyces sp. Ru87 | 2 |
| Bacteria | Staphylococcus stepanovicii | 11 |
| Bacteria | Fusobacterium varium ATCC 27725 | 11 |
| Bacteria | Rhodobacter sp. BACL10 MAG-120419-bin15 | 1 |
| Bacteria | Candidatus Arthromitus sp. SFB-turkey | 5 |
| Mammals | Trichechus manatus latirostris | 26 |
| Bacteria | Alkalimonas amylolytica | 1 |
| Bacteria | Bacillus sp. FJAT-21945 | 2 |
| Bacteria | Robiginitomaculum sp. | 7 |
| Bacteria | Rhodopseudomonas faecalis | 1 |
| Bacteria | Photobacterium angustum S14 | 3 |
| Bacteria | Streptococcus ratti FA-1 = DSM 20564 | 17 |
| Bacteria | Gilliamella sp. N-G2 | 3 |
| Bacteria | Candidatus Brocadia sp. | 4 |
| Bacteria | Enterococcus sp. 3H8_DIV0648 | 38 |
| Bacteria | Ignavigranum ruoffiae | 7 |
| Bacteria | Bacillus subtilis subsp. subtilis str. 168 | 6 |
| Bacteria | Paenibacillus larvae subsp. larvae DSM 25430 | 5 |
| Bacteria | Vibrio sp. C7 | 5 |
| Bacteria | Sphingopyxis sp. MC1 | 1 |
| Bacteria | Ruminococcus sp. AF14-10 | 1 |
| Bacteria | Lachnoclostridium sp. An76 | 1 |
| Bacteria | Vibrio sp. UCD-FRSSP16_10 | 5 |
| Bacteria | Novosphingobium sp. CF614 | 1 |
| Bacteria | Agrobacterium tumefaciens | 3 |
| Bacteria | Frigoribacterium sp. JB110 | 2 |
| Bacteria | Ruminococcus lactaris | 1 |
| Bacteria | Aeromonas lusitana | 1 |
| Bacteria | Bacillus cereus ATCC 14579 | 2 |
| Bacteria | Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 | 6 |
| Bacteria | Kurthia sibirica | 1 |
| Bacteria | Lactobacillus casei UW4 | 3 |
| Bacteria | Plautia stali symbiont | 8 |
| Bacteria | candidate division BRC1 bacterium ADurb.Bin183 | 6 |
| Bacteria | Xanthomonas sacchari | 2 |
| Environmental samples | uncultured Flavonifractor sp. | 2 |
| Bacteria | Shigella flexneri 5 str. 8401 | 5 |
| Bacteria | Collinsella sp. An307 | 3 |
| Bacteria | Enterovibrio coralii | 5 |
| Bacteria | Hwanghaeicola aestuarii | 1 |
| Bacteria | Vagococcus humatus | 6 |
| Bacteria | Escherichia coli HVH 87 (4-5977630) | 4 |
| Bacteria | Acidithiobacillus sp. SH | 1 |
| Invertebrates | Drosophila virilis | 19 |
| Mammals | Equus caballus | 37 |
| Bacteria | Staphylococcus aureus subsp. aureus | 1 |
| Vertebrates | Pelodiscus sinensis | 12 |
| Bacteria | Salmonella enterica subsp. enterica serovar Heidelberg | 6 |
| Bacteria | Marinococcus luteus | 9 |
| Invertebrates | Ciona savignyi | 24 |
| Bacteria | Brucella neotomae | 1 |
| Bacteria | Olsenella sp. AF21-51 | 1 |
| Bacteria | Lachnobacterium bovis DSM 14045 | 2 |
| Bacteria | Pantoea sp. At-9b | 9 |
| Bacteria | Synergistaceae bacterium | 1 |
| Bacteria | Paenibacillus larvae subsp. larvae B-3650 | 4 |
| Bacteria | Proteiniborus ethanoligenes | 1 |
| Bacteria | Herbaspirillum seropedicae SmR1 | 1 |
| Bacteria | Neisseria elongata | 1 |
| Bacteria | Lactobacillus backii | 6 |
| Bacteria | Escherichia coli O26:H11 | 3 |
| Bacteria | Streptococcus pneumoniae 2070335 | 10 |
| Bacteria | Klebsiella sp. P1CD1 | 4 |
| Invertebrates | Anopheles sinensis | 2 |
| Bacteria | Staphylococcus auricularis | 2 |
| Bacteria | Klebsiella pneumoniae subsp. rhinoscleromatis | 8 |
| Bacteria | Bradyrhizobium valentinum | 1 |
| Bacteria | Haematospirillum jordaniae | 1 |
| Rodents | Mus musculus | 56 |
| Bacteria | Lactobacillus salivarius | 10 |
| Bacteria | Mesorhizobium albiziae | 2 |
| Primates | Rhinopithecus bieti | 41 |
| Invertebrates | Drosophila ananassae | 20 |
| Bacteria | Arthrobacter sp. Rue61a | 2 |
| Bacteria | Candidatus Omnitrophica bacterium CG02_land_8_20_14_3_00__42_8 | 1 |
| Bacteria | Clostridium cadaveris | 6 |
| Bacteria | Polynucleobacter sp. GWA2_45_21 | 1 |
| Bacteria | Halobacillus halophilus DSM 2266 | 4 |
| Bacteria | Clostridium sp. AM27-31LB | 1 |
| Bacteria | Kaistia sp. SCN 65-12 | 2 |
| Bacteria | Neisseria macacae ATCC 33926 | 1 |
| Bacteria | Planctomycetes bacterium DG_23 | 4 |
| Mammals | Myotis davidii | 6 |
| Bacteria | Corynebacterium pseudotuberculosis C231 | 3 |
| Bacteria | Alkalispirochaeta americana | 10 |
| Bacteria | Bacillus indicus | 1 |
| Bacteria | Brucella sp. 83/13 | 1 |
| Bacteria | Cupriavidus sp. UYMSc13B | 1 |
| Bacteria | Weissella minor | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar 4,5,12:b:- | 4 |
| Bacteria | Neptuniibacter sp. Phe_28 | 1 |
| Bacteria | Mycoplasma capricolum subsp. capripneumoniae 87001 | 1 |
| Bacteria | Anaerostipes sp. 992a | 6 |
| Bacteria | Pediococcus cellicola | 7 |
| Bacteria | Thermoanaerobacter siderophilus SR4 | 3 |
| Bacteria | Erwinia sp. Leaf53 | 9 |
| Bacteria | Weissella cibaria | 1 |
| Bacteria | Eubacterium sp. An3 | 3 |
| Bacteria | Salinibacterium sp. S1194 | 3 |
| Bacteria | Clostridium felsineum DSM 794 | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.AU.002.03.1.1 | 1 |
| Bacteria | Ochrobactrum sp. 715/2009 | 1 |
| Bacteria | Lactobacillus murinus ASF361 | 3 |
| Bacteria | Pseudaminobacter salicylatoxidans | 1 |
| Bacteria | Sphingomonas sp. FARSPH | 2 |
| Invertebrates | Lottia gigantea | 6 |
| Bacteria | Lactococcus termiticola | 3 |
| Bacteria | Nocardia seriolae | 4 |
| Bacteria | Actinomyces sp. oral taxon 170 str. F0386 | 1 |
| Bacteria | bacterium (Candidatus Stahlbacteria) CG23_combo_of_CG06-09_8_20_14_all_34_7 | 2 |
| Bacteria | Staphylococcus aureus subsp. aureus str. Newman | 7 |
| Bacteria | Rhodobacteraceae bacterium KLH11 | 1 |
| Bacteria | Dubosiella newyorkensis | 2 |
| Bacteria | Veillonella sp. T11011-6 | 1 |
| Bacteria | Streptomyces sp. SceaMP-e96 | 3 |
| Bacteria | Enterococcus casseliflavus EC10 | 6 |
| Bacteria | Yersinia enterocolitica subsp. palearctica YE-P4 | 5 |
| Bacteria | Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 | 2 |
| Bacteria | Arthrobacter sp. PAMC 25486 | 2 |
| Bacteria | Haemophilus haemoglobinophilus | 3 |
| Bacteria | Vagococcus fluvialis bH819 | 8 |
| Bacteria | Lentisphaerae bacterium ADurb.Bin082 | 5 |
| Bacteria | Candidatus Omnitrophica bacterium CG22_combo_CG10-13_8_21_14_all_43_16 | 2 |
| Bacteria | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 | 1 |
| Bacteria | Streptomyces sp. A217 | 1 |
| Bacteria | Streptomyces katrae | 2 |
| Bacteria | Yersinia enterocolitica subsp. enterocolitica | 5 |
| Bacteria | Borrelia coriaceae Co53 | 3 |
| Bacteria | Lactobacillus hominis DSM 23910 = CRBIP 24.179 | 1 |
| Bacteria | Marinomonas sp. BSi20584 | 1 |
| Bacteria | Zetaproteobacteria bacterium CG_4_10_14_0_8_um_filter_49_80 | 1 |
| Bacteria | Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N26626 | 3 |
| Bacteria | Epulopiscium sp. AS2M-Bin001 | 3 |
| Bacteria | Clostridium sp. OM04-12AA | 1 |
| Bacteria | Sphingomonadales bacterium BRH_c42 | 1 |
| Bacteria | Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 | 1 |
| Bacteria | Carnobacterium sp. CP1 | 5 |
| Bacteria | Aliivibrio fischeri MJ11 | 2 |
| Bacteria | Rhodohalobacter sp. SW132 | 2 |
| Bacteria | Streptococcus sanguinis | 4 |
| Bacteria | Parageobacillus caldoxylosilyticus NBRC 107762 | 5 |
| Bacteria | Leucobacter massiliensis | 2 |
| Bacteria | Alkalibacterium sp. 20 | 8 |
| Bacteria | Azospirillum sp. B510 | 1 |
| Bacteria | Thermoanaerobacterium thermosaccharolyticum | 6 |
| Bacteria | Pediococcus acidilactici NGRI 0510Q | 6 |
| Bacteria | Fervidicola ferrireducens | 5 |
| Bacteria | Streptomyces thermolilacinus SPC6 | 1 |
| Bacteria | Sellimonas intestinalis | 2 |
| Bacteria | Paenibacillus sp. FSL H8-0548 | 4 |
| Bacteria | Cohnella sp. 18JY8-7 | 2 |
| Bacteria | bacterium ADurb.Bin374 | 1 |
| Vertebrates | Calypte anna | 9 |
| Bacteria | Lactobacillus oeni DSM 19972 | 6 |
| Bacteria | Deltaproteobacteria bacterium RBG_13_61_14 | 3 |
| Invertebrates | Homalodisca liturata | 7 |
| Bacteria | Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_45_15 | 1 |
| Bacteria | Massilia sp. JS1662 | 1 |
| Bacteria | Shigella flexneri VA-6 | 1 |
| Bacteria | Mycobacterium sp. ACS1612 | 1 |
| Bacteria | bacterium (Candidatus Ratteibacteria) CG15_BIG_FIL_POST_REV_8_21_14_020_41_12 | 2 |
| Bacteria | Sediminispirochaeta smaragdinae DSM 11293 | 9 |
| Bacteria | Serratia fonticola AU-P3(3) | 2 |
| Bacteria | Treponema saccharophilum DSM 2985 | 5 |
| Bacteria | Lactobacillus sakei subsp. sakei 23K | 1 |
| Bacteria | Escherichia coli O103:H2 str. 12009 | 5 |
| Bacteria | Lentisphaerae bacterium RIFOXYB12_FULL_65_16 | 5 |
| Bacteria | Mycoplasma alligatoris A21JP2 | 3 |
| Invertebrates | Stomoxys calcitrans | 3 |
| Bacteria | Photorhabdus australis | 2 |
| Bacteria | Proteiniborus sp. DW1 | 2 |
| Bacteria | Desulfobulbaceae bacterium DB1 | 2 |
| Bacteria | Idiomarina abyssalis | 1 |
| Bacteria | Bacillus megaterium NCT-2 | 1 |
| Bacteria | Escherichia sp. | 1 |
| Bacteria | [Clostridium] celerecrescens | 1 |
| Bacteria | Spirochaeta thermophila DSM 6192 | 5 |
| Bacteria | Streptomyces sp. RV15 | 2 |
| Bacteria | Streptomyces sp. 76 | 1 |
| Bacteria | Eubacterium sp. AF18-3 | 7 |
| Bacteria | Renibacterium salmoninarum ATCC 33209 | 3 |
| Bacteria | Planctomycetaceae bacterium SCGC AG-212-F19 | 2 |
| Bacteria | Myxococcus stipitatus DSM 14675 | 4 |
| Invertebrates | Tribolium castaneum | 5 |
| Bacteria | Enterococcus ureasiticus | 11 |
| Bacteria | Henriciella sp. JN25 | 1 |
| Bacteria | Sphingomonas dokdonensis | 1 |
| Bacteria | Vibrio panuliri | 6 |
| Bacteria | Streptomyces sp. 3213.3 | 2 |
| Bacteria | Lachnoclostridium sp. An14 | 3 |
| Bacteria | Staphylococcus saprophyticus | 6 |
| Bacteria | Kocuria rhizophila | 2 |
| Bacteria | Thalassococcus sp. SH-1 | 1 |
| Bacteria | Pseudorhodobacter sp. PARRP1 | 1 |
| Bacteria | Phenylobacterium kunshanense | 1 |
| Invertebrates | Necator americanus | 3 |
| Invertebrates | Musca domestica | 4 |
| Vertebrates | Pygoscelis adeliae | 1 |
| Bacteria | Escherichia coli KTE107 | 5 |
| Bacteria | Lactobacillus paracasei NRIC 0644 | 7 |
| Bacteria | Fibrobacter sp. UWR2 | 2 |
| Bacteria | Wenxinia saemankumensis | 1 |
| Bacteria | Francisella tularensis subsp. tularensis SCHU S4 | 2 |
| Bacteria | Propionispora hippei DSM 15287 | 6 |
| Bacteria | Desulfobacterales bacterium | 3 |
| Bacteria | Clostridium sp. DMHC 10 | 11 |
| Bacteria | Streptomyces sp. 2233.2 | 3 |
| Bacteria | Dolosigranulum pigrum | 4 |
| Bacteria | Rodentibacter genomosp. 2 | 1 |
| Bacteria | Listeria monocytogenes M7 | 8 |
| Bacteria | Streptomyces xinghaiensis | 2 |
| Bacteria | Cutibacterium granulosum | 2 |
| Bacteria | Vibrio mediterranei | 3 |
| Environmental samples | Collinsella sp. CAG:289 | 4 |
| Bacteria | Treponema pedis str. T A4 | 3 |
| Bacteria | Propionibacterium sp. KPL1838 | 1 |
| Bacteria | Lactobacillus saniviri JCM 17471 = DSM 24301 | 7 |
| Bacteria | Clostridiales bacterium Nov_37_41 | 5 |
| Bacteria | Streptomyces cellostaticus | 2 |
| Bacteria | Arthrobacter stackebrandtii | 4 |
| Bacteria | Geobacillus sp. 12AMOR1 | 1 |
| Bacteria | Serratia sp. LCN16 | 1 |
| Bacteria | Candidatus Omnitrophica bacterium ADurb.Bin277 | 1 |
| Bacteria | Streptococcus canis | 2 |
| Bacteria | Ochrobactrum sp. EGD-AQ16 | 1 |
| Bacteria | Oceanimonas baumannii | 2 |
| Bacteria | Clostridiales bacterium 42_27 | 6 |
| Bacteria | Actinopolyspora erythraea | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.15.1.1 | 1 |
| Bacteria | Cardiobacterium valvarum F0432 | 3 |
| Bacteria | Arenimonas sp. SCN 70-307 | 1 |
| Bacteria | Aurantimicrobium minutum | 1 |
| Bacteria | Corynebacterium pilosum | 1 |
| Bacteria | Lactobacillus fuchuensis DSM 14340 = JCM 11249 | 7 |
| Environmental samples | Clostridium sp. CAG:964 | 1 |
| Bacteria | Paenarthrobacter ureafaciens | 4 |
| Bacteria | Spiroplasma mirum ATCC 29335 | 4 |
| Bacteria | Burkholderia sp. TSV86 | 2 |
| Invertebrates | Trichinella sp. T8 | 11 |
| Vertebrates | Phaethon lepturus | 1 |
| Bacteria | Variovorax gossypii | 1 |
| Bacteria | Corynebacterium freneyi DNF00450 | 2 |
| Bacteria | Pasteurella multocida subsp. multocida P1062 | 1 |
| Bacteria | Yangia sp. | 1 |
| Bacteria | Paenibacillus sp. Soil522 | 4 |
| Bacteria | Rhodobacterales bacterium HTCC2255 | 1 |
| Bacteria | Williamsia sp. Leaf354 | 1 |
| Bacteria | Acidiphilium multivorum AIU301 | 1 |
| Bacteria | Comamonas kerstersii | 1 |
| Bacteria | bacterium SM23_31 | 1 |
| Bacteria | Sphingomonas sp. 28-62-20 | 1 |
| Bacteria | Rhodothermaeota bacterium MED-G64 | 1 |
| Bacteria | Aeromonas caviae | 2 |
| Bacteria | Listeria floridensis FSL S10-1187 | 5 |
| Bacteria | Candidatus Paraburkholderia calva | 1 |
| Bacteria | Coprothermobacter proteolyticus DSM 5265 | 2 |
| Bacteria | Firmicutes bacterium ASF500 | 1 |
| Bacteria | Streptococcus pneumoniae SP6-BS73 | 2 |
| Bacteria | Vibrio sp. JCM 18905 | 3 |
| Bacteria | Plantibacter sp. Leaf314 | 4 |
| Bacteria | Chromobacterium violaceum | 1 |
| Bacteria | Absiella dolichum DSM 3991 | 9 |
| Invertebrates | Meloidogyne hapla | 4 |
| Bacteria | Pusillimonas noertemannii | 1 |
| Bacteria | Streptomyces sp. Root264 | 1 |
| Bacteria | Ruegeria arenilitoris | 1 |
| Bacteria | candidate division WOR-3 bacterium | 4 |
| Bacteria | Kineosphaera limosa NBRC 100340 | 2 |
| Bacteria | Veillonella denticariosi JCM 15641 | 1 |
| Bacteria | Desulfobacteraceae bacterium 4572_88 | 3 |
| Bacteria | Gordonia soli NBRC 108243 | 1 |
| Bacteria | Candidatus Omnitrophica bacterium ADurb.Bin205 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Wandsworth str. A4-580 | 5 |
| Bacteria | Sphingorhabdus sp. | 1 |
| Bacteria | Neisseria animaloris | 1 |
| Bacteria | Aneurinibacillus aneurinilyticus ATCC 12856 | 1 |
| Bacteria | Dethiosulfatibacter aminovorans DSM 17477 | 3 |
| Invertebrates | Dracunculus medinensis | 5 |
| Bacteria | Natribacillus halophilus | 3 |
| Bacteria | Parageobacillus genomosp. 1 | 3 |
| Bacteria | Thalassospira sp. | 2 |
| Bacteria | Streptococcus pneumoniae PCS8106 | 3 |
| Bacteria | candidate division WOR-3 bacterium RBG_13_43_14 | 2 |
| Bacteria | Atlantibacter subterranea | 8 |
| Bacteria | Bacillus bataviensis LMG 21833 | 5 |
| Bacteria | Desulfobacterium vacuolatum DSM 3385 | 3 |
| Bacteria | Bacillus clausii KSM-K16 | 17 |
| Bacteria | Salinibacterium amurskyense | 4 |
| Bacteria | Rhizobium etli CNPAF512 | 1 |
| Bacteria | Lactobacillus psittaci DSM 15354 | 2 |
| Bacteria | Phaeobacter sp. S60 | 1 |
| Bacteria | Advenella mimigardefordensis DPN7 | 1 |
| Bacteria | Anaeromicrobium sediminis | 6 |
| Bacteria | Staphylococcus sp. HMSC070A03 | 3 |
| Bacteria | Desulfovibrionales bacterium GWA2_65_9 | 2 |
| Bacteria | Sphingomonas sp. IBVSS1 | 1 |
| Bacteria | Salinicoccus kekensis | 2 |
| Bacteria | Corynebacterium sp. HMSC078H07 | 1 |
| Invertebrates | Stylophora pistillata | 6 |
| Bacteria | Pseudobutyrivibrio xylanivorans DSM 14809 | 1 |
| Bacteria | Streptohalobacillus salinus | 11 |
| Bacteria | Atopobium vaginae | 4 |
| Bacteria | Streptomyces sp. WAC 01529 | 3 |
| Bacteria | Thermoanaerobacteraceae bacterium SP2 | 6 |
| Bacteria | Lactobacillus crispatus ST1 | 2 |
| Bacteria | Gordonia neofelifaecis NRRL B-59395 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_19FT_COMBO_46_9 | 1 |
| Bacteria | bacterium HR39 | 1 |
| Bacteria | Pseudomonas sp. v388 | 3 |
| Bacteria | Smithella sp. SDB | 1 |
| Bacteria | Betaproteobacteria bacterium | 1 |
| Environmental samples | Collinsella sp. CAG:398 | 3 |
| Bacteria | Edwardsiella tarda EIB202 | 2 |
| Bacteria | Endomicrobium proavitum | 1 |
| Bacteria | Desulfovibrio mexicanus | 2 |
| Bacteria | Microbacterium testaceum | 1 |
| Bacteria | Bacillus butanolivorans | 1 |
| Bacteria | Arthrobacter sp. RIT-PI-e | 3 |
| Bacteria | Candidatus Endomicrobium trichonymphae | 4 |
| Bacteria | Franconibacter pulveris | 3 |
| Bacteria | Planctomycetes bacterium RBG_16_64_10 | 1 |
| Bacteria | Thauera sp. 27 | 1 |
| Bacteria | Caballeronia glathei | 2 |
| Bacteria | Phaeobacter gallaeciensis | 1 |
| Bacteria | Plasticicumulans acidivorans | 2 |
| Bacteria | Methylophaga sp. 42_8_T64 | 1 |
| Bacteria | Streptococcus sp. HMSC073D05 | 1 |
| Bacteria | Nitrococcus mobilis Nb-231 | 1 |
| Bacteria | Brevibacillus sp. WF146 | 6 |
| Bacteria | Anaerococcus prevotii ACS-065-V-Col13 | 4 |
| Bacteria | Peptococcaceae bacterium BRH_c23 | 3 |
| Bacteria | Propionibacterium sp. KPL2005 | 3 |
| Bacteria | Staphylococcus capitis | 3 |
| Bacteria | Marinobacterium georgiense DSM 11526 | 1 |
| Bacteria | bacterium | 5 |
| Bacteria | Pseudomonas sp. URMO17WK12:I7 | 1 |
| Bacteria | Moraxella ovis | 1 |
| Bacteria | Roseivivax halodurans JCM 10272 | 1 |
| Bacteria | Xanthomonas sp. Mitacek01 | 1 |
| Bacteria | Methylorubrum extorquens | 1 |
| Bacteria | Pseudomonas sp. CMAA1215 | 3 |
| Bacteria | Mycoplasma conjunctivae HRC/581 | 4 |
| Bacteria | Corynebacterium tuberculostearicum SK141 | 2 |
| Bacteria | Pseudomonas syringae pv. tomato | 3 |
| Bacteria | Staphylococcus schleiferi | 9 |
| Invertebrates | Heliothis virescens | 5 |
| Bacteria | Gardnerella vaginalis 5-1 | 1 |
| Bacteria | Oceanobacillus limi | 1 |
| Bacteria | Obesumbacterium proteus ATCC 12841 | 3 |
| Bacteria | Gemmatimonadetes bacterium 13_1_40CM_3_65_8 | 2 |
| Bacteria | Pasteurellaceae bacterium NI1060 | 3 |
| Bacteria | Morganella morganii | 4 |
| Bacteria | Nocardioides sp. CF8 | 2 |
| Bacteria | Fibrobacter sp. UWH9 | 1 |
| Bacteria | Streptococcus mutans UA159 | 7 |
| Bacteria | Methyloceanibacter superfactus | 1 |
| Bacteria | Verminephrobacter eiseniae EF01-2 | 2 |
| Bacteria | Clostridiales bacterium 38-18 | 3 |
| Bacteria | Clostridium botulinum E1 str. 'BoNT E Beluga' | 1 |
| Bacteria | Pseudomonas syringae pv. japonica str. M301072 | 2 |
| Bacteria | Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8 | 2 |
| Bacteria | Agathobaculum butyriciproducens | 2 |
| Bacteria | Psychromonas sp. Urea-02u-13 | 4 |
| Bacteria | Bacillus sp. AFS077874 | 1 |
| Bacteria | Seinonella peptonophila | 6 |
| Bacteria | Proteobacteria bacterium ST_bin14 | 1 |
| Bacteria | Bacillus sp. YLB-04 | 1 |
| Bacteria | Gracilibacillus halophilus YIM-C55.5 | 5 |
| Bacteria | Thiohalorhabdus denitrificans | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Johannesburg | 3 |
| Bacteria | Microbacterium sp. RU33B | 3 |
| Bacteria | Candidatus Latescibacteria bacterium 4484_7 | 3 |
| Bacteria | Lactobacillus curvatus | 6 |
| Bacteria | Streptomyces sp. 1331.2 | 1 |
| Bacteria | Mesorhizobium sp. SCN 65-20 | 1 |
| Bacteria | Escherichia coli SMS-3-5 | 4 |
| Bacteria | Aureimonas sp. Leaf454 | 1 |
| Bacteria | Paenibacillus durus | 2 |
| Bacteria | Sorangium cellulosum So ce56 | 2 |
| Bacteria | Geodermatophilus sp. Leaf369 | 3 |
| Bacteria | Zymomonas mobilis subsp. pomaceae ATCC 29192 | 1 |
| Bacteria | Coriobacteriaceae bacterium BV3Ac1 | 6 |
| Bacteria | Halobacteroides halobius DSM 5150 | 9 |
| Bacteria | beta proteobacterium AAP65 | 1 |
| Bacteria | Streptomyces sp. CB02923 | 1 |
| Bacteria | Clostridium sp. OM02-18AC | 1 |
| Bacteria | Desulfurella amilsii | 1 |
| Bacteria | Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 | 1 |
| Bacteria | Brachybacterium sp. VR2415 | 3 |
| Bacteria | Hydrocarboniphaga daqingensis | 2 |
| Bacteria | Pseudomonas sp. FW507-12TSA | 1 |
| Bacteria | Paenibacillus oryzae | 1 |
| Bacteria | Inquilinus limosus | 1 |
| Bacteria | Acidaminococcus fermentans DSM 20731 | 1 |
| Environmental samples | Catenibacterium sp. CAG:290 | 3 |
| Bacteria | Ralstonia solanacearum CMR15 | 1 |
| Environmental samples | Eubacterium sp. CAG:252 | 1 |
| Bacteria | Selenomonas ruminantium subsp. lactilytica TAM6421 | 3 |
| Bacteria | Enterococcus faecalis ERV68 | 2 |
| Bacteria | Bordetella genomosp. 9 | 1 |
| Bacteria | Rhodobaca barguzinensis | 1 |
| Bacteria | Pelagibaca sp. | 1 |
| Bacteria | Cobetia sp. | 2 |
| Bacteria | Criibacterium bergeronii | 1 |
| Bacteria | Planctopirus limnophila DSM 3776 | 3 |
| Bacteria | Paracoccus isoporae | 1 |
| Bacteria | Polynucleobacter sphagniphilus | 1 |
| Bacteria | Gilliamella intestini | 2 |
| Invertebrates | Angiostrongylus cantonensis | 3 |
| Bacteria | Actinomyces gaoshouyii | 2 |
| Bacteria | Legionella israelensis DSM 19235 | 1 |
| Bacteria | Serratia sp. S1B | 9 |
| Bacteria | Paraglaciecola polaris LMG 21857 | 1 |
| Bacteria | Klebsiella sp. RIT-PI-d | 6 |
| Bacteria | Psychromicrobium lacuslunae | 1 |
| Bacteria | Chlorobium phaeovibrioides DSM 265 | 1 |
| Bacteria | Lactobacillus johnsonii FI9785 | 4 |
| Bacteria | Micrococcales bacterium KH10 | 2 |
| Bacteria | Halomonas desiderata SP1 | 2 |
| Bacteria | Polynucleobacter aenigmaticus | 1 |
| Bacteria | Escherichia coli 5-366-08_S1_C1 | 3 |
| Bacteria | Fibrobacter sp. UWS1 | 1 |
| Bacteria | Pseudomonas sp. HMWF010 | 2 |
| Bacteria | Nitrosomonas eutropha C91 | 1 |
| Bacteria | Butyrivibrio sp. CB08 | 3 |
| Bacteria | Verrucomicrobia bacterium TMED60 | 1 |
| Bacteria | Streptococcus pyogenes GA06023 | 1 |
| Bacteria | Paraglaciecola psychrophila 170 | 1 |
| Bacteria | Janthinobacterium sp. BJB312 | 1 |
| Bacteria | Vibrio cholerae RC385 | 1 |
| Bacteria | Celeribacter indicus | 1 |
| Bacteria | Rhodobacteraceae bacterium BH-SD16 | 1 |
| Bacteria | Lactobacillus alimentarius DSM 20249 | 4 |
| Bacteria | Microbacterium paraoxydans | 1 |
| Bacteria | Escherichia albertii TW07627 | 2 |
| Bacteria | Anaerococcus lactolyticus S7-1-13 | 3 |
| Bacteria | Streptomyces auratus AGR0001 | 2 |
| Bacteria | Convivina intestini | 1 |
| Bacteria | Verrucomicrobiaceae bacterium TMED76 | 1 |
| Bacteria | Bacillus sp. 7504-2 | 9 |
| Bacteria | Polymorphum gilvum SL003B-26A1 | 1 |
| Bacteria | Paenibacillus sp. 3-5-3 | 3 |
| Bacteria | Paenibacillus sp. CAA11 | 1 |
| Bacteria | Clostridium sp. W14A | 9 |
| Bacteria | Bacillus niacini | 3 |
| Bacteria | Lactococcus lactis subsp. lactis KF147 | 5 |
| Bacteria | Mycoplasma cynos C142 | 3 |
| Bacteria | Ferrimonas marina | 1 |
| Bacteria | Bacillus nakamurai | 3 |
| Bacteria | Lysobacter enzymogenes | 2 |
| Bacteria | Domibacillus iocasae | 3 |
| Bacteria | Thiomonas sp. 13-64-67 | 1 |
| Bacteria | Paenibacillus sp. YN15 | 1 |
| Environmental samples | Proteobacteria bacterium CAG:139 | 1 |
| Bacteria | Terrisporobacter othiniensis | 8 |
| Bacteria | Vibrio ichthyoenteri ATCC 700023 | 5 |
| Bacteria | Xenophilus sp. AP218F | 3 |
| Bacteria | Chromatiales bacterium 21-64-14 | 1 |
| Bacteria | Mycolicibacterium obuense | 4 |
| Bacteria | Bacteroidetes bacterium GWA2_31_9b | 1 |
| Environmental samples | Akkermansia sp. CAG:344 | 1 |
| Bacteria | Rhodoferax fermentans | 2 |
| Bacteria | Marinomonas spartinae | 1 |
| Bacteria | [Clostridium] citroniae | 5 |
| Bacteria | Escherichia coli TA249 | 3 |
| Bacteria | Burkholderia ubonensis | 3 |
| Bacteria | Paenibacillus graminis | 3 |
| Bacteria | Bacillus thuringiensis serovar israelensis ATCC 35646 | 2 |
| Bacteria | Omnitrophica bacterium RIFCSPLOWO2_01_FULL_45_24 | 3 |
| Bacteria | Microbacterium sp. LCT-H2 | 1 |
| Bacteria | Asticcacaulis sp. AC460 | 1 |
| Bacteria | Pantoea rwandensis | 4 |
| Bacteria | Pseudomonas saudiphocaensis | 1 |
| Bacteria | Roseburia sp. OM02-15 | 2 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFOXYA2_FULL_45_12 | 1 |
| Bacteria | Borrelia duttonii CR2A | 4 |
| Bacteria | Pusillimonas sp. EA3 | 1 |
| Bacteria | Xanthobacter autotrophicus Py2 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.004.06.1.1 | 1 |
| Bacteria | Streptomyces scabiei | 1 |
| Bacteria | Paenibacillus yonginensis | 3 |
| Bacteria | Polynucleobacter wuianus | 1 |
| Bacteria | Bosea sp. 67-29 | 1 |
| Bacteria | Streptomyces sp. 2233.5 | 1 |
| Bacteria | Sphingomonas sp. Leaf33 | 1 |
| Bacteria | Alphaproteobacteria bacterium TMED54 | 1 |
| Bacteria | Azospira oryzae PS | 1 |
| Vertebrates | Picoides pubescens | 5 |
| Bacteria | Spiroplasma kunkelii CR2-3x | 2 |
| Bacteria | Cellulomonas gilvus ATCC 13127 | 1 |
| Bacteria | Deltaproteobacteria bacterium GWA2_57_13 | 1 |
| Bacteria | Staphylococcus cohnii subsp. cohnii | 2 |
| Bacteria | Methylocystis bryophila | 1 |
| Bacteria | Candidatus Schekmanbacteria bacterium RBG_16_38_11 | 1 |
| Bacteria | Novosphingobium sp. Leaf2 | 2 |
| Bacteria | Phaeobacter gallaeciensis DSM 26640 | 1 |
| Bacteria | Moellerella wisconsensis ATCC 35017 | 3 |
| Bacteria | secondary endosymbiont of Ctenarytaina eucalypti | 1 |
| Vertebrates | Micrurus spixii | 2 |
| Bacteria | Paracoccus alcaliphilus | 1 |
| Bacteria | Rhodobacteraceae bacterium HTCC2083 | 1 |
| Bacteria | Hydrogenophilales bacterium 17-61-76 | 1 |
| Bacteria | Phaeobacter inhibens | 1 |
| Bacteria | Bacillus sp. es.036 | 3 |
| Bacteria | Alteromonas aestuariivivens | 1 |
| Bacteria | Amnibacterium sp. M8JJ-5 | 3 |
| Bacteria | Arthrobacter oryzae | 3 |
| Bacteria | Staphylococcus aureus subsp. aureus MW2 | 4 |
| Bacteria | Chromobacterium sphagni | 2 |
| Bacteria | Pseudomonas sp. p99-361 | 2 |
| Bacteria | Brevibacillus borstelensis AK1 | 1 |
| Bacteria | Vibrio vulnificus CMCP6 | 3 |
| Bacteria | Clostridium tetani E88 | 1 |
| Bacteria | Leifsonia sp. 71-9 | 1 |
| Bacteria | Clostridium drakei | 2 |
| Bacteria | Shewanella denitrificans OS217 | 1 |
| Bacteria | Clostridium scatologenes | 3 |
| Bacteria | [Curtobacterium] plantarum | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG1_02_40_15 | 1 |
| Bacteria | Novosphingobium sp. MBES04 | 2 |
| Bacteria | Buchnera aphidicola (Diuraphis noxia) | 1 |
| Bacteria | Opitutaceae bacterium TAV1 | 2 |
| Invertebrates | Ixodes scapularis | 2 |
| Bacteria | Nocardia farcinica IFM 10152 | 1 |
| Bacteria | Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_02_FULL_65_16 | 1 |
| Bacteria | Mycolicibacterium cosmeticum | 2 |
| Bacteria | Pseudomonas sp. URMO17WK12:I11 | 2 |
| Bacteria | Opitutae bacterium Tous-C8FEB | 2 |
| Bacteria | Amnibacterium sp. DD4a | 2 |
| Bacteria | Lentisphaerae bacterium GWF2_45_14 | 6 |
| Bacteria | Mesoplasma lactucae ATCC 49193 | 1 |
| Bacteria | Anaerotruncus sp. AF02-27 | 1 |
| Bacteria | Microvirga vignae | 1 |
| Bacteria | Kocuria palustris | 1 |
| Bacteria | Globicatella sanguinis | 2 |
| Bacteria | Erwinia piriflorinigrans CFBP 5888 | 1 |
| Bacteria | Agrobacterium vitis S4 | 1 |
| Bacteria | Syntrophobacter fumaroxidans MPOB | 1 |
| Bacteria | Pseudomonas sp. TTU2014-066ASC | 1 |
| Bacteria | Elusimicrobia bacterium GWA2_66_18 | 3 |
| Bacteria | Chondromyces crocatus | 2 |
| Bacteria | endosymbiont of Tevnia jerichonana (vent Tica) | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium SM23_29 | 2 |
| Bacteria | Erythrobacter sp. RIFCSPHIGHO2_12_FULL_63_10 | 2 |
| Bacteria | Lactobacillus brevis ATCC 14869 = DSM 20054 | 2 |
| Bacteria | Cupriavidus sp. SK-4 | 1 |
| Bacteria | Suttonella ornithocola | 3 |
| Bacteria | Pseudomonas litoralis | 1 |
| Bacteria | Reinekea blandensis MED297 | 4 |
| Bacteria | Bacillus okhensis | 5 |
| Bacteria | Hoeflea sp. IMCC20628 | 1 |
| Bacteria | Rhodopila globiformis | 1 |
| Bacteria | Streptococcus salivarius | 3 |
| Bacteria | Escherichia coli 99.0741 | 5 |
| Bacteria | Haemophilus paraphrohaemolyticus HK411 | 1 |
| Bacteria | Mycoplasma gallinaceum | 1 |
| Bacteria | Streptococcus agalactiae FSL C1-487 | 1 |
| Bacteria | Phaeobacter italicus | 1 |
| Bacteria | Actinophytocola xinjiangensis | 1 |
| Bacteria | Ochrobactrum sp. POC9 | 1 |
| Bacteria | Paenibacillus solani | 1 |
| Bacteria | Betaproteobacteria bacterium TMED41 | 1 |
| Bacteria | Bacillus kochii | 1 |
| Bacteria | Burkholderiales bacterium RIFOXYC12_FULL_65_23 | 1 |
| Bacteria | Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43 | 2 |
| Bacteria | Deltaproteobacteria bacterium 21-66-5 | 2 |
| Bacteria | Azospirillum sp. TSO22-1 | 3 |
| Bacteria | Collimonas arenae | 2 |
| Bacteria | candidate division Zixibacteria bacterium DG_27 | 2 |
| Bacteria | Methylorubrum zatmanii | 1 |
| Bacteria | Desulfovibrio sp. FW1012B | 1 |
| Bacteria | Frondihabitans sp. PhB153 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.004.04.1.1 | 1 |
| Bacteria | Bacillus vietnamensis | 4 |
| Bacteria | Arthrobacter cupressi | 2 |
| Invertebrates | Bombyx mori | 3 |
| Environmental samples | Dorea formicigenerans CAG:28 | 1 |
| Bacteria | Streptomyces sp. WAC08401 | 1 |
| Environmental samples | Clostridium sp. CAG:122 | 1 |
| Bacteria | Caldanaerobacter subterraneus | 3 |
| Bacteria | Cutibacterium acnes JCM 18920 | 3 |
| Bacteria | Sinomonas atrocyanea | 3 |
| Bacteria | Brenneria salicis ATCC 15712 = DSM 30166 | 6 |
| Bacteria | Tessaracoccus lapidicaptus | 2 |
| Bacteria | Anoxybacillus flavithermus WK1 | 3 |
| Bacteria | Verrucomicrobia bacterium ADurb.Bin118 | 2 |
| Bacteria | Thermoplasmatales archaeon ex4572_165 | 1 |
| Bacteria | Saccharopolyspora antimicrobica | 1 |
| Bacteria | Clostridium sp. TF01-11 | 1 |
| Bacteria | Pseudooceanicola nitratireducens | 1 |
| Bacteria | Streptococcus pneumoniae GA44500 | 3 |
| Bacteria | Mesorhizobium sp. LA-28 | 1 |
| Bacteria | Candidatus Burkholderia pumila | 1 |
| Bacteria | Colwellia sp. PAMC 20917 | 1 |
| Bacteria | Facklamia miroungae | 8 |
| Bacteria | Betaproteobacteria bacterium TMED82 | 1 |
| Bacteria | Paraglaciecola hydrolytica | 1 |
| Bacteria | Paracoccus thiocyanatus | 1 |
| Bacteria | Lactonifactor longoviformis DSM 17459 | 2 |
| Bacteria | Janthinobacterium sp. CG23_2 | 1 |
| Bacteria | bacterium BMS3Abin14 | 1 |
| Bacteria | bacterium BMS3Bbin10 | 1 |
| Bacteria | Desulfobacterales bacterium S3730MH5 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.07.1.1 | 1 |
| Bacteria | Pediococcus claussenii ATCC BAA-344 | 3 |
| Bacteria | Granulicatella elegans ATCC 700633 | 6 |
| Bacteria | Rhodobacteraceae bacterium TG-679 | 1 |
| Bacteria | Nonomuraea gerenzanensis | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG1_02_43_210 | 1 |
| Bacteria | Butyricicoccus porcorum | 1 |
| Bacteria | Prosthecochloris sp. HL-130-GSB | 1 |
| Bacteria | Neisseria sicca VK64 | 1 |
| Bacteria | Mycolicibacterium duvalii | 2 |
| Bacteria | Calditerrivibrio nitroreducens DSM 19672 | 2 |
| Bacteria | Arsenophonus sp. ENCA | 1 |
| Bacteria | Rhizobium sp. AP16 | 1 |
| Bacteria | Aggregatibacter actinomycetemcomitans RhAA1 | 1 |
| Bacteria | Actinomadura echinospora | 1 |
| Bacteria | Roseateles depolymerans | 1 |
| Bacteria | Brevundimonas diminuta 470-4 | 2 |
| Bacteria | Pseudonocardia sp. HH130629-09 | 1 |
| Bacteria | Alphaproteobacteria bacterium TMED62 | 1 |
| Bacteria | Photorhabdus laumondii subsp. laumondii TTO1 | 3 |
| Bacteria | Enterobacteriaceae bacterium ENNIH1 | 1 |
| Bacteria | Desulfoplanes formicivorans | 1 |
| Bacteria | Selenomonas sputigena ATCC 35185 | 1 |
| Bacteria | Oceanimonas doudoroffii | 2 |
| Bacteria | Pseudooceanicola flagellatus | 1 |
| Bacteria | Pragia fontium | 2 |
| Bacteria | Candidatus Contendobacter odensis Run_B_J11 | 1 |
| Bacteria | Halomonas sp. HL-48 | 2 |
| Bacteria | Sodalis glossinidius str. 'morsitans' | 4 |
| Bacteria | Elstera cyanobacteriorum | 1 |
| Bacteria | Deltaproteobacteria bacterium TMED58 | 1 |
| Bacteria | Geobacter lovleyi SZ | 1 |
| Bacteria | Streptomyces sp. H-KF8 | 1 |
| Bacteria | Burkholderiales bacterium PBB3 | 1 |
| Bacteria | Legionella nautarum | 1 |
| Bacteria | Cronobacter sakazakii ATCC BAA-894 | 2 |
| Bacteria | Afifella marina DSM 2698 | 2 |
| Bacteria | Pusillimonas sp. JR1/69-2-13 | 1 |
| Bacteria | Spirochaetae bacterium HGW-Spirochaetae-4 | 2 |
| Bacteria | Gallionellaceae bacterium CG1_02_56_997 | 1 |
| Bacteria | Actinotalea ferrariae CF5-4 | 1 |
| Bacteria | Polaromonas sp. CG9_12 | 1 |
| Bacteria | Chitinispirillum alkaliphilum | 5 |
| Bacteria | Gardnerella sp. DNF01162 | 1 |
| Bacteria | Roseburia sp. OM04-15AA | 1 |
| Bacteria | Streptococcus canis FSL Z3-227 | 1 |
| Bacteria | Bacillus pseudomycoides DSM 12442 | 1 |
| Bacteria | Jannaschia rubra | 1 |
| Bacteria | Pseudoxanthobacter soli DSM 19599 | 1 |
| Bacteria | Planococcus antarcticus DSM 14505 | 2 |
| Bacteria | Clavibacter michiganensis subsp. michiganensis | 2 |
| Bacteria | Alphaproteobacteria bacterium MarineAlpha11_Bin1 | 1 |
| Bacteria | Bordetella sp. HZ20 | 1 |
| Bacteria | Legionella busanensis | 1 |
| Bacteria | Clostridium bornimense | 1 |
| Bacteria | Francisella sp. FSC1006 | 1 |
| Bacteria | Corynebacterium halotolerans YIM 70093 = DSM 44683 | 2 |
| Bacteria | Enterococcus sp. | 1 |
| Bacteria | Weissella bombi | 2 |
| Bacteria | Pseudomonas putida ND6 | 1 |
| Bacteria | Amycolatopsis xylanica | 1 |
| Bacteria | Nocardioides sp. Root79 | 1 |
| Bacteria | Gallionella capsiferriformans ES-2 | 1 |
| Bacteria | Nocardia cyriacigeorgica GUH-2 | 1 |
| Bacteria | Clostridium sp. AM49-4BH | 1 |
| Environmental samples | Eubacterium sp. CAG:581 | 1 |
| Bacteria | Pseudomonas putida H8234 | 1 |
| Bacteria | Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 | 1 |
| Bacteria | Mitsuokella multacida | 1 |
| Bacteria | Pseudomonas yangmingensis | 1 |
| Bacteria | Streptomyces showdoensis | 1 |
| Bacteria | Lelliottia sp. 7254-16 | 1 |
| Bacteria | Desulfarculus baarsii DSM 2075 | 1 |
| Bacteria | Rhodospirillales bacterium 69-11 | 1 |
| Bacteria | Pseudomonas fulva 12-X | 2 |
| Bacteria | Paraburkholderia caballeronis | 2 |
| Bacteria | Gammaproteobacteria bacterium SG8_31 | 2 |
| Bacteria | Pseudomonas synxantha | 2 |
| Bacteria | Desulfobacula sp. RIFOXYB2_FULL_45_6 | 2 |
| Bacteria | Aquaspirillum sp. LM1 | 1 |
| Bacteria | Devosia psychrophila | 1 |
| Bacteria | Streptococcus sp. SR4 | 1 |
| Bacteria | Verrucomicrobia bacterium LW23 | 2 |
| Bacteria | Candidatus Accumulibacter sp. BA-93 | 1 |
| Bacteria | Ectothiorhodospira haloalkaliphila | 1 |
| Bacteria | Corynebacterium sp. 13CS0277 | 1 |
| Bacteria | Megasphaera sp. NM10 | 1 |
| Bacteria | Rheinheimera sp. EpRS3 | 1 |
| Bacteria | Tardiphaga robiniae | 1 |
| Bacteria | Gammaproteobacteria bacterium MOLA455 | 1 |
| Bacteria | Candidatus Regiella insecticola 5.15 | 2 |
| Bacteria | Mycoplasma capricolum subsp. capripneumoniae | 1 |
| Bacteria | Sinorhizobium meliloti CCNWSX0020 | 1 |
| Bacteria | Thiobacillus sp. SCN 65-179 | 1 |
| Invertebrates | Anopheles quadriannulatus | 1 |
| Bacteria | Streptomyces caatingaensis | 1 |
| Bacteria | Erythrobacter litoralis HTCC2594 | 1 |
| Bacteria | Geobacillus sp. GHH01 | 2 |
| Bacteria | Olavius algarvensis spirochete endosymbiont | 2 |
| Bacteria | Candidatus Schekmanbacteria bacterium RBG_16_38_10 | 1 |
| Bacteria | Devosia sp. 66-22 | 1 |
| Bacteria | Devosia sp. Root436 | 1 |
| Bacteria | Yersinia nurmii | 1 |
| Bacteria | Hyphomonas hirschiana VP5 | 1 |
| Bacteria | Rhizobium miluonense | 1 |
| Bacteria | Neisseria gonorrhoeae DGI2 | 1 |
| Bacteria | Pseudooceanicola atlanticus | 1 |
| Bacteria | Marinimicrobium koreense | 1 |
| Bacteria | Acholeplasma palmae J233 | 1 |
| Bacteria | Brucella abortus 2308 | 1 |
| Bacteria | Halomonas chromatireducens | 1 |
| Bacteria | Desulfovibrio bizertensis DSM 18034 | 1 |
| Bacteria | Burkholderia sp. OK233 | 1 |
| Bacteria | Candidatus Rhodobacter lobularis | 1 |
| Bacteria | Paraburkholderia ribeironis | 1 |
| Bacteria | Rathayibacter tritici | 4 |
| Bacteria | Leptospira mayottensis 200901116 | 1 |
| Bacteria | Marinobacter nitratireducens | 1 |
| Bacteria | Syntrophus sp. PtaB.Bin138 | 2 |
| Bacteria | Pseudomonas aeruginosa MH27 | 1 |
| Bacteria | Bordetella petrii DSM 12804 | 1 |
| Bacteria | Streptococcus salivarius CCHSS3 | 1 |
| Bacteria | Leptospira sp. serovar Kenya str. Sh9 | 1 |
| Bacteria | Massilia sp. CF038 | 1 |
| Bacteria | Roseovarius pacificus | 1 |
| Bacteria | Rhizobium sp. NFR12 | 2 |
| Bacteria | Xanthomonadaceae bacterium NML120232 | 1 |
| Bacteria | Pseudomonas coronafaciens pv. porri | 1 |
| Bacteria | Palleronia abyssalis | 1 |
| Bacteria | Novosphingobium sp. GV027 | 1 |
| Bacteria | Staphylococcus hominis | 2 |
| Bacteria | Legionella jordanis | 1 |
| Bacteria | Pseudoalteromonas sp. R3 | 1 |
| Bacteria | Pseudoalteromonas sp. NBT06-2 | 1 |
| Bacteria | Paenibacillus stellifer | 1 |
| Bacteria | Pseudomonas asturiensis | 1 |
| Bacteria | Candidatus Desantisbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_40_23 | 1 |
| Bacteria | Desulfosporosinus sp. OT | 1 |
| Bacteria | Bacillus sp. RU2C | 1 |
| Bacteria | Thermobrachium celere DSM 8682 | 2 |
| Invertebrates | Brugia timori | 3 |
| Bacteria | Sphingopyxis macrogoltabida | 1 |
| Bacteria | Streptomyces sp. ZFG47 | 1 |
| Bacteria | alpha proteobacterium BAL199 | 1 |
| Bacteria | Aeromicrobium sp. A1-2 | 1 |
| Bacteria | Pseudomonas guineae | 1 |
| Bacteria | Paenibacillus baekrokdamisoli | 1 |
| Bacteria | Lactobacillus sp. ESL0261 | 1 |
| Bacteria | Dorea sp. AM58-8 | 3 |
| Bacteria | Rhodococcus qingshengii | 1 |
| Bacteria | Thalassotalea sp. ND16A | 1 |
| Bacteria | Escherichia coli O145 str. RM9872 | 2 |
| Bacteria | Mesorhizobium japonicum MAFF 303099 | 1 |
| Bacteria | Roseobacter sp. AzwK-3b | 1 |
| Bacteria | Bifidobacterium breve MCC 1114 | 1 |
| Bacteria | Lactobacillus reuteri | 1 |
| Bacteria | Sphingomonas mucosissima | 1 |
| Bacteria | Halomonas sp. N3-2A | 1 |
| Bacteria | Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 | 1 |
| Bacteria | Acidithiobacillus caldus | 1 |
| Environmental samples | Clostridium sp. CAG:167 | 1 |
| Bacteria | Agromyces sp. OV568 | 1 |
| Bacteria | Pseudorhodobacter antarcticus | 1 |
| Bacteria | Pseudomonas mosselii | 1 |
| Bacteria | Agromyces sp. Leaf222 | 1 |
| Bacteria | Streptomyces pristinaespiralis | 1 |
| Bacteria | Syntrophorhabdus sp. PtaB.Bin047 | 1 |
| Bacteria | Zetaproteobacteria bacterium CG2_30_59_37 | 1 |
| Bacteria | Pseudomonas putida CSV86 | 2 |
| Bacteria | Bacillus sp. AFS096315 | 1 |
| Bacteria | Kordiimonadales bacterium | 1 |
| Bacteria | Streptococcus pyogenes NZ131 | 1 |
| Bacteria | Marinobacter sp. HL-58 | 1 |
| Bacteria | Oceanicoccus sagamiensis | 1 |
| Bacteria | Rhizobacter sp. Root29 | 1 |
| Bacteria | Bacillus trypoxylicola | 2 |
| Bacteria | Tibeticola sediminis | 1 |
| Bacteria | Devosia chinhatensis | 1 |
| Bacteria | Xanthomonadales bacterium RIFOXYA1_FULL_69_10 | 1 |
| Bacteria | Francisella sp. CA97-1460 | 1 |
| Bacteria | Sphingomonas sp. 67-36 | 1 |
| Bacteria | Lactococcus lactis subsp. lactis bv. diacetylactis | 2 |
| Bacteria | Hyphomonas sp. T16B2 | 1 |
| Bacteria | Curtobacterium flaccumfaciens UCD-AKU | 2 |
| Bacteria | Desulfuromonas sp. DDH964 | 2 |
| Vertebrates | Takifugu obscurus | 1 |
| Bacteria | Celeribacter manganoxidans | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24 | 1 |
| Bacteria | Streptomyces sp. NTK 937 | 1 |
| Bacteria | Compostimonas suwonensis | 1 |
| Bacteria | Bosea vaviloviae | 1 |
| Bacteria | Burkholderiaceae bacterium 16 | 1 |
| Bacteria | Microbacterium sp. ABRD_28 | 2 |
| Bacteria | Treponema denticola F0402 | 1 |
| Bacteria | Acinetobacter johnsonii SH046 | 2 |
| Bacteria | Thermotoga naphthophila RKU-10 | 1 |
| Bacteria | Treponema denticola ATCC 35405 | 2 |
| Bacteria | Roseivivax sediminis | 1 |
| Bacteria | Hyphomonas polymorpha PS728 | 1 |
| Bacteria | Metakosakonia sp. MRY16-398 | 2 |
| Bacteria | Ectothiorhodospira magna | 1 |
| Bacteria | Alphaproteobacteria bacterium ADurb.Bin438 | 1 |
| Bacteria | Pseudomonas sp. JS15-10A1 | 1 |
| Bacteria | Pediococcus parvulus | 3 |
| Bacteria | Williamsia sp. 1138 | 1 |
| Bacteria | Aquamicrobium aerolatum DSM 21857 | 1 |
| Bacteria | Rhizobium sp. C16 | 2 |
| Bacteria | Roseivivax jejudonensis | 1 |
| Bacteria | Dietzia maris | 1 |
| Bacteria | Agrobacterium sp. RAC06 | 1 |
| Bacteria | Delftia acidovorans SPH-1 | 2 |
| Bacteria | Erythrobacter xanthus | 1 |
| Bacteria | Roseburia sp. AF25-25LB | 1 |
| Bacteria | Streptomyces sp. PAN_FS17 | 1 |
| Bacteria | Ahrensia sp. R2A130 | 1 |
| Bacteria | Desulfovibrio magneticus RS-1 | 1 |
| Bacteria | Glutamicibacter sp. BW80 | 1 |
| Bacteria | Microbacterium sp. 13-71-7 | 2 |
| Bacteria | Escherichia marmotae | 3 |
| Bacteria | Bradyrhizobium canariense | 1 |
| Bacteria | Mesorhizobium sp. WSM3866 | 1 |
| Bacteria | Clostridium sp. 28_12 | 1 |
| Bacteria | Deltaproteobacteria bacterium GWF2_42_12 | 1 |
| Bacteria | Catenovulum maritimum | 1 |
| Bacteria | Candidatus Phaeomarinobacter ectocarpi | 1 |
| Bacteria | Marinobacter subterrani | 1 |
| Bacteria | Brucella suis ATCC 23445 | 1 |
| Bacteria | Asticcacaulis sp. YBE204 | 1 |
| Bacteria | Lactococcus lactis subsp. lactis IO-1 | 1 |
| Bacteria | Mediterraneibacter butyricigenes | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_40_36 | 1 |
| Bacteria | Salinisphaeraceae bacterium | 1 |
| Bacteria | Bordetella avium 197N | 1 |
| Bacteria | Xenorhabdus bovienii SS-2004 | 1 |
| Bacteria | Sphingobium chlorophenolicum L-1 | 1 |
| Bacteria | Acidithiobacillus ferrivorans SS3 | 1 |
| Bacteria | Thiohalomonas denitrificans | 1 |
| Bacteria | Roseobacter sp. SK209-2-6 | 1 |
| Bacteria | Pseudomonas sp. WN033 | 1 |
| Bacteria | Streptomyces sp. WAC06614 | 1 |
| Bacteria | Polaromonas sp. C04 | 1 |
| Bacteria | Paenibacillus sp. yr247 | 3 |
| Bacteria | Rhodopseudomonas palustris BisB18 | 1 |
| Bacteria | Rhodobacteraceae bacterium WD3A24 | 1 |
| Bacteria | Rhodobacteraceae bacterium AsT-22 | 1 |
| Bacteria | Variovorax sp. YR216 | 1 |
| Bacteria | Sphingomonas sp. LH128 | 2 |
| Bacteria | Paucibacter sp. KBW04 | 1 |
| Bacteria | Vogesella indigofera | 1 |
| Bacteria | Fretibacterium sp. OH1220_COT-178 | 1 |
| Bacteria | Novosphingobium sp. PC22D | 1 |
| Bacteria | Sphingomonas changbaiensis NBRC 104936 | 1 |
| Bacteria | Malikia spinosa | 1 |
| Bacteria | Bacillus sp. AFS017336 | 1 |
| Bacteria | Clostridium celatum DSM 1785 | 1 |
| Bacteria | Azoarcus sp. SY39 | 1 |
| Bacteria | Symbiobacterium thermophilum | 1 |
| Bacteria | Pseudomonas entomophila | 2 |
| Bacteria | Gemella haemolysans M341 | 2 |
| Bacteria | Laceyella sacchari | 1 |
| Bacteria | Kingella kingae ATCC 23330 | 1 |
| Bacteria | Planococcus halotolerans | 1 |
| Bacteria | Sphingomonas sp. Leaf339 | 1 |
| Bacteria | Mesorhizobium jarvisii | 1 |
| Bacteria | Devosia riboflavina | 1 |
| Bacteria | Mesoplasma corruscae | 2 |
| Bacteria | Ramlibacter tataouinensis | 1 |
| Bacteria | Cellvibrionales bacterium TMED122 | 1 |
| Bacteria | Streptomyces longwoodensis | 1 |
| Bacteria | Prosthecochloris sp. ZM_2 | 1 |
| Bacteria | Idiomarina loihiensis L2TR | 1 |
| Bacteria | Photobacterium phosphoreum | 1 |
| Bacteria | Acidithiobacillales bacterium SG8_45 | 1 |
| Bacteria | Hydrogenophilus thermoluteolus | 1 |
| Bacteria | Xanthomonas translucens pv. translucens DSM 18974 | 2 |
| Bacteria | Cognatishimia maritima | 1 |
| Bacteria | Pelagibacterium sp. XYN52 | 1 |
| Bacteria | Nitrosomonas mobilis | 1 |
| Bacteria | Intrasporangium oryzae NRRL B-24470 | 1 |
| Bacteria | Actinophytocola xanthii | 1 |
| Bacteria | Legionella beliardensis | 1 |
| Bacteria | Sulfitobacter sp. JL08 | 1 |
| Bacteria | Spiribacter curvatus | 1 |
| Bacteria | Comamonadaceae bacterium NML00-0135 | 1 |
| Bacteria | Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 | 1 |
| Bacteria | Arthrobacter sp. SW1 | 3 |
| Bacteria | endosymbiont of unidentified scaly snail isolate Monju | 1 |
| Bacteria | Thioalkalivibrio versutus | 1 |
| Bacteria | Weissella soli | 1 |
| Bacteria | Jeotgalibaca dankookensis | 1 |
| Bacteria | Brevibacterium linens | 1 |
| Bacteria | Sinorhizobium fredii | 2 |
| Bacteria | Phaeobacter sp. CECT 7735 | 1 |
| Bacteria | Shewanella benthica KT99 | 1 |
| Bacteria | Microbulbifer sp. ZGT114 | 1 |
| Bacteria | Arthrobacter sp. ok909 | 1 |
| Bacteria | Nonomuraea fuscirosea | 1 |
| Bacteria | Branchiibius sp. NY16-3462-2 | 1 |
| Bacteria | Streptomyces tirandamycinicus | 1 |
| Bacteria | Comamonas serinivorans | 1 |
| Bacteria | Streptomyces sp. NBRC 110611 | 1 |
| Plants and Fungi | Porphyra umbilicalis | 1 |
| Bacteria | Rhizobiales bacterium 32-66-8 | 1 |
| Bacteria | Ochrobactrum anthropi ATCC 49188 | 2 |
| Bacteria | Parageobacillus toebii | 1 |
| Bacteria | Bacillus mesonae | 2 |
| Bacteria | Citrobacter freundii complex sp. CFNIH9 | 1 |
| Bacteria | Leuconostoc mesenteroides | 2 |
| Bacteria | Neptunomonas antarctica | 1 |
| Bacteria | Lysobacter concretionis Ko07 = DSM 16239 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPLOWO2_02_FULL_50_19 | 1 |
| Bacteria | Phyllobacterium sp. OV277 | 3 |
| Bacteria | Streptomyces sp. NTH33 | 1 |
| Bacteria | Proteus penneri | 1 |
| Bacteria | Sulfitobacter sp. CB2047 | 1 |
| Bacteria | Turicimonas muris | 1 |
| Bacteria | Nitrosovibrio sp. Nv17 | 1 |
| Bacteria | Arthrobacter enclensis | 1 |
| Bacteria | Lysobacter antibioticus | 1 |
| Bacteria | Candidatus Thermokryptus mobilis | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED107 | 1 |
| Bacteria | Ochrobactrum sp. | 1 |
| Bacteria | Bosea sp. WAO | 1 |
| Bacteria | Nocardiopsaceae bacterium YIM 96095 | 1 |
| Bacteria | Thauera sp. K11 | 1 |
| Bacteria | Acidiphilium rubrum | 1 |
| Bacteria | Streptomyces sp. TLI_55 | 1 |
| Bacteria | Gemmiger sp. An120 | 1 |
| Bacteria | Paraglaciecola sp. MB-3u-78 | 1 |
| Environmental samples | Firmicutes bacterium CAG:65 | 1 |
| Bacteria | Nitrosomonas sp. Nm51 | 1 |
| Bacteria | Nitrosococcus oceani ATCC 19707 | 1 |
| Bacteria | Xanthomonadales bacterium 69-70 | 1 |
| Bacteria | Oceanibacterium hippocampi | 1 |
| Bacteria | Brevundimonas viscosa | 1 |
| Bacteria | Actinopolyspora saharensis | 1 |
| Bacteria | Desulfobacteraceae bacterium CG2_30_51_40 | 1 |
| Bacteria | Corynebacterium efficiens YS-314 | 1 |
| Bacteria | Nitrospirae bacterium RBG_19FT_COMBO_55_12 | 1 |
| Bacteria | Lampropedia hyalina DSM 16112 | 1 |
| Bacteria | Bradyrhizobium sp. DFCI-1 | 1 |
| Bacteria | [Clostridium] populeti | 1 |
| Bacteria | Ignavibacteria bacterium GWC2_36_12 | 1 |
| Bacteria | Loktanella sp. 1ANDIMAR09 | 1 |
| Environmental samples | Anaerotruncus sp. CAG:528 | 1 |
| Bacteria | Martelella mediterranea DSM 17316 | 1 |
| Bacteria | Listeria innocua | 1 |
| Bacteria | Brucella abortus bv. 5 str. B3196 | 1 |
| Bacteria | Nocardiopsis sp. TSRI0078 | 1 |
| Bacteria | Lysinibacillus fusiformis | 1 |
| Bacteria | Arsukibacterium sp. MJ3 | 1 |
| Bacteria | Granulosicoccus antarcticus IMCC3135 | 1 |
| Bacteria | Erwiniaceae bacterium | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 | 1 |
| Bacteria | Propionibacterium sp. KPL1847 | 1 |
| Bacteria | Deltaproteobacteria bacterium CG_4_10_14_3_um_filter_51_14 | 1 |
| Bacteria | Roseburia sp. 831b | 1 |
| Bacteria | Cyclobacterium lianum | 1 |
| Bacteria | Pseudoalteromonas agarivorans S816 | 1 |
| Bacteria | Mycoplasma mycoides subsp. capri | 1 |
| Bacteria | Azorhizobium sp. 32-67-21 | 1 |
| Bacteria | Bacillus cereus 95/8201 | 1 |
| Bacteria | Hydrogenophaga sp. IBVHS1 | 1 |
| Bacteria | Nocardia asteroides NBRC 15531 | 1 |
| Bacteria | Geobacteraceae bacterium GWC2_53_11 | 1 |
| Bacteria | Massilia sp. Root418 | 1 |
| Bacteria | Erwinia pyrifoliae DSM 12163 | 1 |
| Bacteria | Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 | 1 |
| Bacteria | Gammaproteobacteria bacterium TMED139 | 1 |
| Bacteria | Sphingomonas koreensis | 1 |
| Bacteria | Clostridium novyi | 1 |
| Bacteria | Noviherbaspirillum sp. Root189 | 1 |
| Bacteria | Caldicellulosiruptor owensensis OL | 1 |
| Bacteria | Comamonas thiooxydans | 1 |
| Bacteria | Streptomyces sp. W007 | 1 |
| Bacteria | Clostridium perfringens ATCC 13124 | 1 |
| Bacteria | Kosakonia sp. CCTCC M2018092 | 1 |
| Bacteria | Microbispora sp. ATCC PTA-5024 | 1 |
| Bacteria | bacterium 1XD42-8 | 1 |
| Bacteria | Streptococcus parasanguinis DORA_23_24 | 1 |
| Bacteria | Pseudomonas japonica | 1 |
| Bacteria | Methyloversatilis universalis FAM5 | 1 |
| Bacteria | Raineyella antarctica | 1 |
| Bacteria | Leclercia sp. LSNIH1 | 2 |
| Bacteria | Acidocella sp. 20-63-7 | 1 |
| Bacteria | Shewanella atlantica | 1 |
| Bacteria | Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 | 1 |
| Bacteria | Lysinibacillus sphaericus OT4b.31 | 1 |
| Bacteria | Marichromatium purpuratum 984 | 1 |
| Bacteria | Pectobacterium carotovorum | 1 |
| Bacteria | Pseudomonas sp. SWI36 | 1 |
| Bacteria | Microvirga subterranea | 1 |
| Bacteria | Sideroxydans lithotrophicus ES-1 | 1 |
| Bacteria | Gammaproteobacteria bacterium MFB021 | 2 |
| Bacteria | Chloroherpeton thalassium ATCC 35110 | 1 |
| Bacteria | Pseudomonas salegens | 1 |
| Bacteria | Lactococcus lactis subsp. lactis A12 | 1 |
| Bacteria | Verrucomicrobia bacterium 13_2_20CM_55_10 | 1 |
| Bacteria | Amycolatopsis albispora | 1 |
| Bacteria | Rhizobium favelukesii | 2 |
| Bacteria | Butyrivibrio sp. TB | 1 |
| Bacteria | Leptospira borgpetersenii serovar Hardjo-bovis str. Sponselee | 1 |
| Bacteria | Arthrobacter sp. ov407 | 1 |
| Bacteria | Gallionellales bacterium GWA2_54_124 | 1 |
| Bacteria | Rhizobium sp. IE4771 | 1 |
| Bacteria | Nesterenkonia jeotgali | 3 |
| Bacteria | Enterococcus devriesei | 24 |
| Bacteria | Sphingobium japonicum BiD32 | 1 |
| Bacteria | Rubrobacter radiotolerans | 3 |
| Bacteria | Oceanobacillus picturae | 11 |
| Bacteria | Fusobacterium nucleatum subsp. animalis ATCC 51191 | 4 |
| Bacteria | Streptomyces agglomeratus | 1 |
| Bacteria | Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_46_13 | 1 |
| Bacteria | Fusobacterium varium | 12 |
| Bacteria | Enterococcus malodoratus ATCC 43197 | 39 |
| Bacteria | Alicyclobacillus hesperidum | 3 |
| Environmental samples | Anaerostipes sp. CAG:276 | 44 |
| Bacteria | Bacillus sp. OK048 | 1 |
| Bacteria | Yersiniaceae bacterium 2016Iso4 | 3 |
| Bacteria | Pseudogracilibacillus auburnensis | 3 |
| Bacteria | Paenibacillus terrae HPL-003 | 6 |
| Bacteria | Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8 | 2 |
| Bacteria | Parashewanella spongiae | 1 |
| Bacteria | Mycoplasma gallisepticum str. R(low) | 1 |
| Bacteria | Sphingomonas sp. JS21-1 | 1 |
| Bacteria | Escherichia coli 909945-2 | 4 |
| Bacteria | Pseudomonas sp. Leaf127 | 3 |
| Bacteria | Spirochaetaceae bacterium 4572_7 | 3 |
| Bacteria | Stappia sp. ARW1T | 1 |
| Bacteria | Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 | 1 |
| Bacteria | Ochrobactrum intermedium LMG 3301 | 1 |
| Invertebrates | Trichinella pseudospiralis | 23 |
| Bacteria | Stappia sp. ES.058 | 1 |
| Bacteria | Halobacillus alkaliphilus | 5 |
| Bacteria | Lactobacillus casei BD-II | 10 |
| Bacteria | Brucella sp. 141012304 | 1 |
| Vertebrates | Xiphophorus maculatus | 49 |
| Bacteria | Acidiphilium cryptum JF-5 | 1 |
| Bacteria | [Ruminococcus] torques L2-14 | 3 |
| Bacteria | Tepidanaerobacter acetatoxydans Re1 | 8 |
| Bacteria | Geoalkalibacter subterraneus | 3 |
| Bacteria | Staphylococcus sp. OJ82 | 9 |
| Bacteria | Melittangium boletus DSM 14713 | 4 |
| Bacteria | Planctomyces sp. | 5 |
| Bacteria | Collinsella sp. An2 | 7 |
| Bacteria | Sinorhizobium fredii CCBAU 83666 | 1 |
| Bacteria | Candidatus Erwinia dacicola | 4 |
| Bacteria | Microcella alkaliphila | 4 |
| Bacteria | Enterococcus villorum ATCC 700913 | 7 |
| Bacteria | Burkholderia pyrrocinia | 1 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 | 2 |
| Bacteria | Paenibacillus sp. MBLB1234 | 6 |
| Bacteria | Microbacterium sp. cf046 | 3 |
| Bacteria | Bacillus licheniformis DSM 13 = ATCC 14580 | 6 |
| Bacteria | Frigoribacterium sp. Leaf172 | 3 |
| Bacteria | Falsibacillus sp. GY 10110 | 7 |
| Bacteria | Trichococcus pasteurii | 5 |
| Bacteria | [Clostridium] bolteae | 3 |
| Bacteria | Pantoea vagans | 7 |
| Bacteria | Streptococcus halitosis | 2 |
| Vertebrates | Larimichthys crocea | 8 |
| Bacteria | Anaerobutyricum hallii | 6 |
| Bacteria | Actinomadura sp. CNU-125 | 2 |
| Bacteria | Clostridium sp. 7_2_43FAA | 8 |
| Bacteria | [Mannheimia] succiniciproducens MBEL55E | 5 |
| Bacteria | Devosia lucknowensis | 2 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_49_23 | 1 |
| Bacteria | Acidobacteria bacterium Mor1 | 1 |
| Bacteria | Vagococcus teuberi | 2 |
| Bacteria | Arthrobacter sp. Bz4 | 2 |
| Bacteria | Thalassobium sp. R2A62 | 1 |
| Bacteria | Lactococcus reticulitermitis | 7 |
| Bacteria | Candidatus Desantisbacteria bacterium CG_4_8_14_3_um_filter_40_12 | 1 |
| Invertebrates | Caenorhabditis remanei | 3 |
| Bacteria | Bacillus gobiensis | 8 |
| Bacteria | Vibrio parahaemolyticus | 15 |
| Vertebrates | Nothobranchius pienaari | 9 |
| Environmental samples | Butyrivibrio crossotus CAG:259 | 1 |
| Bacteria | Verrucomicrobiae bacterium DG1235 | 2 |
| Bacteria | Anaerobacillus macyae | 6 |
| Bacteria | Candidatus Fermentibacter daniensis | 3 |
| Bacteria | Clostridiaceae bacterium OF09-1 | 7 |
| Bacteria | Peptostreptococcus sp. D1 | 1 |
| Bacteria | Lactobacillus sp. HMSC056D05 | 5 |
| Bacteria | Candidatus Hydrogenedentes bacterium ADurb.Bin170 | 3 |
| Bacteria | Frigoribacterium sp. Leaf186 | 1 |
| Bacteria | Tyzzerella sp. An114 | 8 |
| Bacteria | Escherichia coli UMEA 3162-1 | 4 |
| Bacteria | Izhakiella australiensis | 12 |
| Bacteria | Streptomyces malaysiensis | 2 |
| Bacteria | Okibacterium fritillariae | 4 |
| Bacteria | candidate division TA06 bacterium 34_109 | 4 |
| Bacteria | Lactobacillus acidophilus | 11 |
| Mammals | Myotis brandtii | 4 |
| Bacteria | Jannaschia donghaensis | 1 |
| Bacteria | Lactobacillus gasseri SV-16A-US | 6 |
| Bacteria | Gemmata sp. SH-PL17 | 1 |
| Bacteria | Methylobacterium sp. Leaf113 | 2 |
| Bacteria | bacterium CG2_30_54_10 | 1 |
| Bacteria | Hafnia alvei | 15 |
| Bacteria | Klebsiella pneumoniae IS39 | 7 |
| Bacteria | Clostridium sp. IBUN13A | 2 |
| Mammals | Balaenoptera acutorostrata scammoni | 19 |
| Bacteria | Mesorhizobium sp. UASWS1009 | 3 |
| Bacteria | Roseburia sp. 1XD42-69 | 1 |
| Bacteria | Enterococcus durans | 16 |
| Bacteria | Spirochaetes bacterium GWC1_61_12 | 9 |
| Bacteria | Paenibacillus mucilaginosus 3016 | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Adelaide str. A4-669 | 3 |
| Bacteria | Variovorax sp. YR752 | 1 |
| Bacteria | Streptococcus sp. DD13 | 7 |
| Bacteria | Cutibacterium granulosum DSM 20700 | 3 |
| Primates | Gorilla gorilla gorilla | 41 |
| Bacteria | Bacillus sp. AFS006103 | 5 |
| Bacteria | Peptoniphilus lacrimalis DNF00528 | 2 |
| Bacteria | Spirochaetae bacterium HGW-Spirochaetae-8 | 1 |
| Bacteria | Desulfobacteraceae bacterium 4572_35.1 | 2 |
| Bacteria | Pluralibacter gergoviae | 7 |
| Bacteria | Legionella oakridgensis | 1 |
| Invertebrates | Lygus hesperus | 6 |
| Bacteria | Pseudarthrobacter phenanthrenivorans | 4 |
| Bacteria | Caulobacter vibrioides | 3 |
| Bacteria | Lentisphaerae bacterium GWF2_38_69 | 1 |
| Bacteria | Marinilabilia sp. WTE | 1 |
| Bacteria | Vibrio sinaloensis | 4 |
| Bacteria | Proteus penneri ATCC 35198 | 2 |
| Bacteria | Streptococcus agalactiae 2603V/R | 5 |
| Bacteria | Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10 | 3 |
| Bacteria | Pelodictyon luteolum DSM 273 | 1 |
| Bacteria | Fusobacterium necrophorum subsp. necrophorum | 6 |
| Bacteria | Enterobacter kobei | 10 |
| Bacteria | Halanaerobium salsuginis | 13 |
| Bacteria | Paenibacillus rhizosphaerae | 4 |
| Bacteria | Klebsiella sp. LY | 11 |
| Bacteria | Escherichia coli MP021561.2 | 6 |
| Bacteria | Lachnospiraceae bacterium | 3 |
| Bacteria | Streptococcus pneumoniae TIGR4 | 10 |
| Bacteria | Gemmiger formicilis | 4 |
| Bacteria | Geobacillus sp. BCO2 | 5 |
| Bacteria | Niveispirillum lacus | 1 |
| Environmental samples | Erysipelotrichaceae bacterium CAG:64 | 51 |
| Vertebrates | Lepisosteus oculatus | 13 |
| Bacteria | Olsenella profusa F0195 | 19 |
| Vertebrates | Paramormyrops kingsleyae | 39 |
| Bacteria | Bacillus sp. X1(2014) | 9 |
| Bacteria | Shimwellia blattae DSM 4481 = NBRC 105725 | 4 |
| Bacteria | Burkholderia sp. MR1 | 1 |
| Bacteria | Nocardioides alpinus | 3 |
| Bacteria | Mesorhizobium ciceri biovar biserrulae WSM1271 | 2 |
| Bacteria | Spirochaeta thermophila DSM 6578 | 5 |
| Bacteria | Enterococcus quebecensis | 5 |
| Bacteria | Croceicoccus naphthovorans | 1 |
| Bacteria | Frigoribacterium sp. Leaf164 | 3 |
| Bacteria | Bacillus sp. XXST-01 | 8 |
| Invertebrates | Culex quinquefasciatus | 6 |
| Bacteria | Burkholderia pseudomallei 1106a | 1 |
| Bacteria | Rhizobium pusense | 1 |
| Plants and Fungi | Batrachochytrium dendrobatidis JAM81 | 3 |
| Bacteria | Streptomyces ipomoeae 91-03 | 1 |
| Bacteria | Gilliamella apicola | 100 |
| Bacteria | delta proteobacterium NaphS2 | 1 |
| Bacteria | Salisediminibacterium haloalkalitolerans | 4 |
| Bacteria | Geodermatophilus dictyosporus | 1 |
| Primates | Colobus angolensis palliatus | 37 |
| Bacteria | [Clostridium] lavalense | 11 |
| Bacteria | Paenibacillus sp. HGF5 | 3 |
| Bacteria | Halobacillus sp. BAB-2008 | 7 |
| Bacteria | Clostridium tyrobutyricum DIVETGP | 8 |
| Bacteria | Nocardioides sp. Soil805 | 2 |
| Bacteria | Brevibacillus brevis NBRC 100599 | 3 |
| Bacteria | Enterococcus columbae DSM 7374 = ATCC 51263 | 6 |
| Bacteria | Salmonella enterica subsp. enterica serovar Saintpaul | 9 |
| Bacteria | Salinicoccus sediminis | 9 |
| Bacteria | Erwinia gerundensis | 6 |
| Bacteria | Corynebacterium glutamicum | 4 |
| Bacteria | Bifidobacterium bifidum S17 | 1 |
| Bacteria | Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 | 1 |
| Bacteria | Planomicrobium soli | 7 |
| Bacteria | Oribacterium sp. WCC10 | 1 |
| Bacteria | Spiroplasma sabaudiense Ar-1343 | 4 |
| Bacteria | Microbacterium sp. 69-10 | 2 |
| Bacteria | Frigoribacterium sp. RIT-PI-h | 4 |
| Bacteria | Thiobacillus sp. 65-1402 | 1 |
| Bacteria | Streptomyces lydicus | 3 |
| Bacteria | Enterococcus casseliflavus EC20 | 20 |
| Bacteria | Enterococcus faecalis R712 | 9 |
| Environmental samples | uncultured Ruminococcus sp. | 18 |
| Bacteria | Salibacterium halotolerans | 10 |
| Bacteria | Shigella sonnei | 18 |
| Bacteria | Shewanella benthica | 1 |
| Bacteria | Enterococcus faecalis TX0630 | 6 |
| Bacteria | Atopobium sp. oral taxon 199 str. F0494 | 3 |
| Bacteria | Bacillus canaveralius | 7 |
| Bacteria | Geobacter daltonii FRC-32 | 2 |
| Bacteria | Bacillus sp. ALD | 2 |
| Environmental samples | Eubacterium dolichum CAG:375 | 3 |
| Bacteria | Sinorhizobium sp. GL28 | 1 |
| Invertebrates | Drosophila pseudoobscura pseudoobscura | 26 |
| Bacteria | Streptococcus gallolyticus | 14 |
| Bacteria | Oceanobacillus caeni | 3 |
| Bacteria | Citrobacter sp. MH181794 | 2 |
| Bacteria | Atopobium minutum | 7 |
| Bacteria | Streptococcus vestibularis | 2 |
| Bacteria | Geobacillus kaustophilus | 4 |
| Bacteria | Cutibacterium acnes JCM 18918 | 6 |
| Bacteria | Gemmatimonas sp. SG8_17 | 1 |
| Bacteria | Caulobacter sp. B11 | 1 |
| Bacteria | Neisseria flavescens | 1 |
| Mammals | Enhydra lutris kenyoni | 27 |
| Mammals | Tupaia chinensis | 9 |
| Bacteria | Providencia alcalifaciens DSM 30120 | 1 |
| Bacteria | Erwinia billingiae Eb661 | 7 |
| Bacteria | Trichococcus ilyis | 10 |
| Bacteria | Enterococcus sp. 9E7_DIV0242 | 23 |
| Bacteria | Raoultella sp. T31 | 2 |
| Bacteria | Lautropia sp. KCOM 2505 | 2 |
| Bacteria | Escherichia coli O127:H6 | 4 |
| Bacteria | bacterium BMS3Abin03 | 2 |
| Bacteria | Amphibacillus xylanus NBRC 15112 | 3 |
| Bacteria | Atlantibacter hermannii | 5 |
| Bacteria | Paeniclostridium sordellii ATCC 9714 | 2 |
| Bacteria | Serratia sp. Leaf51 | 5 |
| Bacteria | Bacillus oleivorans | 8 |
| Bacteria | Clostridium sp. IBUN22A | 2 |
| Bacteria | Pasteurella multocida | 5 |
| Bacteria | Parachlamydia acanthamoebae UV-7 | 2 |
| Bacteria | Vibrio rumoiensis 1S-45 | 5 |
| Bacteria | Cellulomonas sp. NEAU-YY56 | 4 |
| Bacteria | Streptococcus sanguinis SK353 | 2 |
| Bacteria | Bacillus muralis | 5 |
| Bacteria | Streptococcus pneumoniae 70585 | 2 |
| Bacteria | Hirschia sp. | 1 |
| Bacteria | Streptococcus acidominimus | 15 |
| Bacteria | Nocardia puris | 1 |
| Bacteria | Burkholderia mallei NCTC 10229 | 1 |
| Bacteria | Bacillus sp. MRMR6 | 6 |
| Bacteria | Salmonella enterica subsp. enterica serovar Montevideo str. S5-403 | 7 |
| Bacteria | Sphaerochaeta pleomorpha str. Grapes | 6 |
| Bacteria | Skermanella stibiiresistens SB22 | 2 |
| Bacteria | Lachnospiraceae bacterium 9_1_43BFAA | 2 |
| Bacteria | Propionispira arboris | 42 |
| Bacteria | Streptomyces coelicolor A3(2) | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Schwarzengrund | 5 |
| Bacteria | Moraxella pluranimalium | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.09.1.1 | 1 |
| Bacteria | Pseudomonas knackmussii B13 | 2 |
| Bacteria | Jeotgalibacillus soli | 7 |
| Bacteria | Bosea sp. 32-68-6 | 1 |
| Bacteria | Bacillus sp. mrc49 | 1 |
| Bacteria | Comamonadaceae bacterium OH3737_COT-264 | 1 |
| Bacteria | Vibrio hepatarius | 11 |
| Bacteria | Kluyvera intermedia | 7 |
| Bacteria | [Clostridium] saccharolyticum WM1 | 13 |
| Vertebrates | Poecilia formosa | 24 |
| Invertebrates | Lucilia cuprina | 2 |
| Bacteria | Staphylococcus pseudintermedius | 3 |
| Bacteria | Rhizobium sp. M10 | 1 |
| Bacteria | Leptotrichia sp. oral taxon 498 | 2 |
| Bacteria | Klebsiella aerogenes | 27 |
| Bacteria | Deltaproteobacteria bacterium RIFOXYD12_FULL_50_9 | 2 |
| Rodents | Fukomys damarensis | 10 |
| Bacteria | Streptococcus gallolyticus subsp. gallolyticus DSM 16831 | 5 |
| Bacteria | Cohaesibacter sp. H1304 | 2 |
| Bacteria | Serratia sp. M24T3 | 4 |
| Bacteria | [Ruminococcus] torques ATCC 27756 | 2 |
| Bacteria | Shewanella oneidensis MR-1 | 1 |
| Bacteria | Virgibacillus dokdonensis | 6 |
| Bacteria | Staphylococcus saccharolyticus | 7 |
| Vertebrates | Micrurus surinamensis | 2 |
| Vertebrates | Anabas testudineus | 32 |
| Bacteria | Omnitrophica bacterium GWA2_52_8 | 1 |
| Bacteria | Sphingomonas sp. 32-66-10 | 1 |
| Bacteria | Erythrobacter sp. NAP1 | 1 |
| Bacteria | Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10 | 4 |
| Bacteria | Mycolicibacterium mageritense DSM 44476 = CIP 104973 | 1 |
| Bacteria | Streptomyces albulus | 2 |
| Bacteria | Streptococcus suis BM407 | 3 |
| Bacteria | Lactobacillus mali KCTC 3596 = DSM 20444 | 9 |
| Bacteria | Opitutae bacterium Tous-C10FEB | 2 |
| Bacteria | Arthrobacter agilis | 3 |
| Bacteria | Opitutus sp. ER46 | 7 |
| Bacteria | Lactobacillus bombicola | 10 |
| Bacteria | Streptococcus iniae | 7 |
| Bacteria | Microbacterium sp. Root180 | 3 |
| Bacteria | Salinibacterium sp. UTAS2018 | 1 |
| Vertebrates | Salmo salar | 89 |
| Bacteria | Caldanaerovirga acetigignens | 6 |
| Bacteria | Lactobacillus suebicus DSM 5007 = KCTC 3549 | 5 |
| Bacteria | Borreliella burgdorferi ZS7 | 2 |
| Bacteria | Geobacter metallireducens GS-15 | 1 |
| Bacteria | Aeromonas sobria | 1 |
| Bacteria | Rhodobacter capsulatus SB 1003 | 2 |
| Bacteria | Listeria seeligeri FSL N1-067 | 5 |
| Bacteria | Pseudooctadecabacter jejudonensis | 1 |
| Bacteria | Carnobacterium maltaromaticum | 13 |
| Invertebrates | Ixodes ricinus | 2 |
| Bacteria | Lactobacillus selangorensis | 4 |
| Bacteria | Propionibacterium australiense | 6 |
| Bacteria | Sphingomonas spermidinifaciens | 1 |
| Bacteria | Clostridium acetobutylicum ATCC 824 | 4 |
| Bacteria | Borreliella burgdorferi 64b | 2 |
| Bacteria | Mycetocola sp. 622 | 4 |
| Bacteria | Mycobacterium sp. ITM-2016-00318 | 1 |
| Vertebrates | Xenopus tropicalis | 14 |
| Bacteria | Psychrobacillus psychrodurans | 2 |
| Bacteria | Phenylobacterium sp. Root1290 | 1 |
| Bacteria | Pseudomonas sp. MWU12-2312b | 4 |
| Bacteria | Olsenella sp. An270 | 3 |
| Bacteria | Desulfuromonadales bacterium C00003093 | 2 |
| Bacteria | Rhizobium sp. RU36D | 1 |
| Invertebrates | Trichinella murrelli | 13 |
| Bacteria | Streptococcus equinus | 3 |
| Bacteria | Raoultella ornithinolytica | 12 |
| Bacteria | Candidatus Moduliflexus flocculans | 6 |
| Bacteria | Lactobacillus melliventris | 9 |
| Bacteria | Lactococcus raffinolactis | 11 |
| Bacteria | Listeriaceae bacterium FSL A5-0209 | 2 |
| Bacteria | Psychromonas sp. psych-6C06 | 4 |
| Bacteria | Clostridiales bacterium 70B-A | 4 |
| Bacteria | Bacillus sp. ok634 | 1 |
| Vertebrates | Cyprinodon variegatus | 36 |
| Bacteria | Treponema lecithinolyticum ATCC 700332 | 4 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_47_11 | 1 |
| Bacteria | Virgibacillus pantothenticus | 16 |
| Invertebrates | Orchesella cincta | 5 |
| Bacteria | Anaerocolumna jejuensis DSM 15929 | 3 |
| Environmental samples | Dorea sp. CAG:105 | 1 |
| Bacteria | Marinobacter excellens HL-55 | 1 |
| Bacteria | Escherichia coli MS 84-1 | 3 |
| Bacteria | Streptococcus sp. 28462 | 2 |
| Bacteria | Cutibacterium acnes J139 | 3 |
| Bacteria | Vibrio breoganii | 2 |
| Bacteria | Rhizobium sp. N113 | 1 |
| Bacteria | Mycoplasma dispar | 4 |
| Bacteria | Vibrio sp. N418 | 8 |
| Bacteria | Sanguibacter sp. Leaf3 | 1 |
| Bacteria | Aggregatibacter sp. oral taxon 458 str. W10330 | 1 |
| Bacteria | Snodgrassella alvi SCGC AB-598-J21 | 1 |
| Bacteria | Clostridium sp. CT4 | 3 |
| Bacteria | Salmonella enterica | 69 |
| Bacteria | Butyricicoccus pullicaecorum | 2 |
| Bacteria | Hydrogenophaga crassostreae | 1 |
| Bacteria | Escherichia coli DEC6A | 9 |
| Bacteria | Curvibacter sp. GWA2_64_110 | 1 |
| Bacteria | Bacillus loiseleuriae | 13 |
| Bacteria | Salmonella enterica subsp. enterica serovar Braenderup str. CFSAN001740 | 6 |
| Bacteria | Marinilactibacillus sp. 15R | 12 |
| Bacteria | Treponema phagedenis F0421 | 6 |
| Bacteria | Clostridium perfringens | 3 |
| Bacteria | Candidatus Aminicenantes bacterium ADurb.Bin147 | 3 |
| Bacteria | Aerococcus viridans | 5 |
| Bacteria | Lactobacillus casei A2-362 | 10 |
| Bacteria | Acidihalobacter prosperus | 3 |
| Bacteria | Acidovorax citrulli AAC00-1 | 2 |
| Bacteria | Tetragenococcus muriaticus 3MR10-3 | 11 |
| Bacteria | Lactobacillus shenzhenensis LY-73 | 6 |
| Bacteria | Pseudomonas formosensis | 1 |
| Bacteria | Pseudomonas sp. NFPP09 | 1 |
| Bacteria | Borreliella bavariensis PBi | 2 |
| Bacteria | Pediococcus argentinicus | 6 |
| Bacteria | Candidimonas nitroreducens | 1 |
| Bacteria | Leminorella grimontii | 4 |
| Bacteria | Edwardsiella piscicida | 1 |
| Rodents | Castor canadensis | 1 |
| Bacteria | bacterium HR22 | 1 |
| Bacteria | Clostridia bacterium BRH_c25 | 11 |
| Bacteria | Yoonia sediminilitoris | 1 |
| Bacteria | Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_70_19 | 1 |
| Bacteria | Sinorhizobium fredii CCBAU 25509 | 1 |
| Bacteria | Haloferax mediterranei ATCC 33500 | 1 |
| Bacteria | Clostridiales bacterium GWB2_37_7 | 1 |
| Bacteria | Planctomycetes bacterium RBG_13_60_9 | 2 |
| Bacteria | Deltaproteobacteria bacterium 13_1_40CM_3_69_14 | 3 |
| Bacteria | Phycisphaerae bacterium SM1_79 | 6 |
| Bacteria | Thermoplasmatales archaeon ex4484_6 | 1 |
| Bacteria | Lactobacillus kimchicus JCM 15530 | 2 |
| Bacteria | Bartonella quintana str. Toulouse | 2 |
| Bacteria | candidate division Zixibacteria bacterium SM23_81 | 5 |
| Bacteria | Rhodobacter sp. 140A | 2 |
| Bacteria | Neisseria sp. 10009 | 1 |
| Bacteria | Arthrobacter crystallopoietes | 3 |
| Bacteria | Tersicoccus sp. Bi-70 | 3 |
| Invertebrates | Lutzomyia longipalpis | 2 |
| Bacteria | Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_57_10 | 1 |
| Bacteria | Corynebacterium sphenisci DSM 44792 | 1 |
| Bacteria | Candidatus Cloacimonetes bacterium | 10 |
| Bacteria | Abiotrophia defectiva ATCC 49176 | 7 |
| Bacteria | Bacillus subtilis XF-1 | 1 |
| Bacteria | Serratia odorifera | 5 |
| Bacteria | Selenomonas noxia ATCC 43541 | 6 |
| Bacteria | Saccharopolyspora spinosa | 1 |
| Bacteria | Streptococcus intermedius B196 | 4 |
| Bacteria | Ruminococcus flavefaciens | 1 |
| Bacteria | Neisseria meningitidis FAM18 | 1 |
| Bacteria | Acetonema longum DSM 6540 | 5 |
| Bacteria | Citrobacter sp. KTE151 | 3 |
| Bacteria | Rhodobacteraceae bacterium THAF1 | 1 |
| Bacteria | Virgibacillus profundi | 10 |
| Bacteria | Breoghania corrubedonensis | 1 |
| Bacteria | Bacillus urumqiensis | 6 |
| Bacteria | Kitasatospora aureofaciens | 4 |
| Bacteria | Xenorhabdus sp. GDc328 | 1 |
| Bacteria | Enterococcus ratti | 12 |
| Invertebrates | Schistosoma rodhaini | 4 |
| Bacteria | Microbacterium sp. Root166 | 3 |
| Bacteria | Acidocella aminolytica 101 = DSM 11237 | 1 |
| Bacteria | Mycolicibacterium vanbaalenii PYR-1 | 2 |
| Environmental samples | uncultured Microbacterium sp. | 2 |
| Environmental samples | uncultured marine bacterium EB0_39F01 | 1 |
| Bacteria | Escherichia coli O145 | 2 |
| Bacteria | Streptococcus pneumoniae PCS8203 | 3 |
| Bacteria | Frondihabitans sp. 762G35 | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Give | 5 |
| Bacteria | Centipeda periodontii DSM 2778 | 11 |
| Bacteria | Escherichia coli M114 | 3 |
| Bacteria | Bacillus sp. Leaf75 | 5 |
| Bacteria | Cupriavidus necator H16 | 1 |
| Bacteria | Paenibacillus sabinae T27 | 3 |
| Bacteria | Enterococcus faecalis TX0104 | 2 |
| Bacteria | Lactobacillus saerimneri DSM 16049 | 4 |
| Environmental samples | Clostridium sp. CAG:470 | 1 |
| Bacteria | Weissella jogaejeotgali | 1 |
| Bacteria | Streptomyces decoyicus | 3 |
| Bacteria | Aeromonas salmonicida subsp. masoucida | 1 |
| Bacteria | Grimontia hollisae CIP 101886 | 4 |
| Bacteria | Comamonadaceae bacterium NML161473 | 1 |
| Bacteria | Arthrobacter globiformis NBRC 12137 | 4 |
| Bacteria | Cryobacterium luteum | 4 |
| Bacteria | Pirellula sp. SH-Sr6A | 2 |
| Bacteria | Vibrio azureus NBRC 104587 | 2 |
| Bacteria | Atopobium minutum 10063974 | 9 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_57_26 | 1 |
| Bacteria | Rubrivivax gelatinosus IL144 | 2 |
| Environmental samples | Clostridium sp. CAG:265 | 3 |
| Bacteria | bacterium B17 | 2 |
| Bacteria | Acinetobacter puyangensis | 2 |
| Bacteria | Salinicola sp. MIT1003 | 2 |
| Bacteria | Mycolicibacterium vaccae ATCC 25954 | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Teko | 6 |
| Bacteria | Streptomyces subrutilus | 2 |
| Environmental samples | uncultured Dorea sp. | 3 |
| Bacteria | Streptococcus cristatus ATCC 51100 | 1 |
| Bacteria | Enterococcus dispar ATCC 51266 | 4 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.002.01.1.1 | 2 |
| Bacteria | Clostridiales bacterium 41_21_two_genomes | 3 |
| Bacteria | Pseudomonas sp. URIL14HWK12:I12 | 3 |
| Bacteria | Klebsiella pneumoniae IS43 | 9 |
| Bacteria | Fulvimarina sp. 85 | 1 |
| Bacteria | Aliivibrio salmonicida LFI1238 | 7 |
| Bacteria | Snodgrassella alvi SCGC AB-598-O11 | 1 |
| Bacteria | Curtobacterium sp. MCSS17_008 | 3 |
| Bacteria | Streptomyces sp. 13-12-16 | 1 |
| Bacteria | Planococcus massiliensis | 6 |
| Bacteria | Sphingomonas fennica | 1 |
| Bacteria | Acidovorax sp. JS42 | 1 |
| Bacteria | Propionibacterium sp. KPL1849 | 1 |
| Bacteria | Streptococcus ferus | 7 |
| Bacteria | Vibrio fluvialis PG41 | 3 |
| Bacteria | Spirochaetes bacterium GWF1_51_8 | 3 |
| Bacteria | Lactobacillus rennini | 9 |
| Bacteria | Ignavibacteria bacterium CG2_30_36_16 | 3 |
| Bacteria | Azorhizobium caulinodans ORS 571 | 1 |
| Bacteria | Elusimicrobia bacterium RIFOXYB2_FULL_49_7 | 1 |
| Bacteria | Faecalibacterium prausnitzii L2-6 | 1 |
| Bacteria | Mobilisporobacter senegalensis | 4 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_48_10 | 1 |
| Bacteria | Enterococcus sp. 8G7_MSG3316 | 2 |
| Bacteria | Clostridium disporicum | 8 |
| Bacteria | Escherichia coli O83:H1 str. NRG 857C | 5 |
| Bacteria | Chloroflexi bacterium CSP1-4 | 1 |
| Bacteria | Pseudomonas hunanensis | 1 |
| Bacteria | Mycolicibacterium neoaurum VKM Ac-1815D | 2 |
| Bacteria | Gemmatimonas sp. SG8_28 | 2 |
| Bacteria | Crenobacter luteus | 2 |
| Bacteria | Rhodopirellula baltica WH47 | 2 |
| Bacteria | bacterium TMED277 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | 9 |
| Invertebrates | Drosophila grimshawi | 2 |
| Invertebrates | Schistosoma mattheei | 4 |
| Bacteria | Listeria sp. SHR_NRA_18 | 2 |
| Bacteria | Escherichia coli ED1a | 5 |
| Bacteria | Rhodococcus biphenylivorans | 1 |
| Bacteria | Neisseria sp. HMSC03D10 | 1 |
| Bacteria | Marinomonas sp. MWYL1 | 1 |
| Bacteria | Providencia sneebia DSM 19967 | 5 |
| Bacteria | Desulfobacterales bacterium S5133MH4 | 2 |
| Bacteria | Thioclava sp. SK-1 | 1 |
| Bacteria | Pseudorhodobacter sp. E13 | 1 |
| Vertebrates | Leptosomus discolor | 3 |
| Bacteria | Flavonifractor sp. An135 | 1 |
| Environmental samples | Firmicutes bacterium CAG:270 | 2 |
| Bacteria | Streptomyces viridochromogenes Tue57 | 2 |
| Bacteria | Lactococcus garvieae DCC43 | 5 |
| Bacteria | Chromobacterium sp. LK1 | 1 |
| Bacteria | Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 | 1 |
| Bacteria | Kangiella geojedonensis | 1 |
| Bacteria | Staphylococcus aureus subsp. aureus N315 | 9 |
| Bacteria | Deltaproteobacteria bacterium RIFCSPLOWO2_02_44_9 | 1 |
| Bacteria | Pseudooceanicola sp. | 2 |
| Bacteria | Geobacillus stearothermophilus | 3 |
| Bacteria | Listeria weihenstephanensis | 8 |
| Bacteria | Halobiforma haloterrestris | 1 |
| Bacteria | Actinobacillus pleuropneumoniae serovar 5b str. L20 | 4 |
| Bacteria | Lactobacillus hordei DSM 19519 | 2 |
| Bacteria | Enterobacteriaceae bacterium JKS000234 | 1 |
| Bacteria | Sutterella wadsworthensis 3_1_45B | 1 |
| Bacteria | Methylacidiphilum infernorum V4 | 1 |
| Bacteria | Paenibacillus pasadenensis | 2 |
| Bacteria | Staphylococcus lentus | 10 |
| Bacteria | Brachyspira pilosicoli | 3 |
| Bacteria | Marinateneraspora sediminis | 3 |
| Bacteria | Lactobacillus plantarum subsp. argentoratensis DSM 16365 | 1 |
| Bacteria | Nitrospirae bacterium GWD2_57_9 | 1 |
| Bacteria | Lachnospiraceae bacterium 3_1_57FAA_CT1 | 2 |
| Bacteria | Enterococcus faecium EnGen0263 | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Thompson | 4 |
| Environmental samples | uncultured Clostridiales bacterium | 12 |
| Bacteria | Pannonibacter phragmitetus | 2 |
| Bacteria | Pantoea coffeiphila | 14 |
| Bacteria | Romboutsia ilealis | 1 |
| Bacteria | Sorangium cellulosum | 4 |
| Bacteria | Desulfobacterales bacterium S7086C20 | 1 |
| Bacteria | Alistipes obesi | 1 |
| Bacteria | Vibrio genomosp. F6 str. FF-238 | 3 |
| Bacteria | Escherichia coli O55:H7 str. CB9615 | 6 |
| Bacteria | Xenorhabdus cabanillasii JM26 | 4 |
| Bacteria | Aggregatibacter segnis ATCC 33393 | 2 |
| Bacteria | Rhodopirellula baltica SWK14 | 3 |
| Bacteria | Vibrio cholerae O395 | 7 |
| Bacteria | Bartonella tamiae Th239 | 2 |
| Bacteria | Lactobacillus salivarius UCC118 | 4 |
| Bacteria | Agrococcus carbonis | 4 |
| Bacteria | Tessaracoccus sp. OH4464_COT-324 | 2 |
| Bacteria | Geobacillus thermocatenulatus | 2 |
| Bacteria | Escherichia fergusonii ATCC 35469 | 3 |
| Bacteria | Devosia sp. SCN 66-27 | 1 |
| Bacteria | Escherichia coli O103 | 5 |
| Bacteria | Spirochaetes bacterium RIFOXYC1_FULL_54_7 | 4 |
| Invertebrates | Harpegnathos saltator | 2 |
| Bacteria | Oscillibacter sp. CAG:241_62_21 | 2 |
| Bacteria | Vitreoscilla filiformis | 1 |
| Bacteria | Enterococcus faecium DO | 14 |
| Bacteria | Pantoea conspicua | 1 |
| Bacteria | Bacillus sp. 7705b | 1 |
| Invertebrates | Trichoplax adhaerens | 3 |
| Bacteria | Tepidimicrobium xylanilyticum | 10 |
| Bacteria | Sinorhizobium meliloti BL225C | 1 |
| Bacteria | Streptomyces rimosus subsp. rimosus ATCC 10970 | 3 |
| Bacteria | Pseudoclavibacter sp. AY1F1 | 1 |
| Bacteria | alpha proteobacterium IMCC14465 | 1 |
| Bacteria | Actinomycetales bacterium JB111 | 1 |
| Bacteria | Pedosphaera sp. | 1 |
| Bacteria | Roseibacillus sp. | 4 |
| Bacteria | Novosphingobium sp. GV010 | 2 |
| Bacteria | Vibrio sp. MEBiC08052 | 2 |
| Bacteria | Entomoplasma freundtii | 6 |
| Vertebrates | Tauraco erythrolophus | 1 |
| Bacteria | Francisella hispaniensis | 1 |
| Bacteria | Lactobacillus plantarum EGD-AQ4 | 3 |
| Bacteria | Streptococcus sp. DD10 | 3 |
| Bacteria | Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21 | 2 |
| Bacteria | Yersinia pekkanenii | 1 |
| Bacteria | Limnohabitans sp. TS-CS-82 | 2 |
| Bacteria | Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_63_9 | 2 |
| Bacteria | Gallionellales bacterium RIFOXYB12_FULL_54_9 | 1 |
| Bacteria | Streptococcus anginosus subsp. whileyi CCUG 39159 | 2 |
| Bacteria | Anaerobranca gottschalkii DSM 13577 | 5 |
| Bacteria | Burkholderia thailandensis | 2 |
| Bacteria | Sulfitobacter geojensis | 1 |
| Bacteria | Sulfitobacter marinus | 1 |
| Bacteria | Serratia sp. Leaf50 | 7 |
| Bacteria | Planctomycetes bacterium GWC2_45_44 | 3 |
| Bacteria | Rhodobiaceae bacterium | 4 |
| Bacteria | Streptomyces sp. WAC 01438 | 2 |
| Bacteria | Pseudorhodobacter sp. MZDSW-24AT | 1 |
| Bacteria | Shigella sonnei Ss046 | 1 |
| Bacteria | Omnitrophica bacterium GWA2_50_21 | 2 |
| Bacteria | Klebsiella grimontii | 8 |
| Bacteria | Paenibacillus popilliae ATCC 14706 | 1 |
| Bacteria | Bacillus luciferensis | 1 |
| Bacteria | Pedosphaera parvula Ellin514 | 4 |
| Bacteria | Rhodospirillaceae bacterium TMED256 | 1 |
| Bacteria | Bordetella sp. 3d-2-2 | 1 |
| Bacteria | Corynebacterium sp. HMSC04H06 | 3 |
| Bacteria | Sphingomonas wittichii RW1 | 1 |
| Bacteria | Duganella sp. CF517 | 1 |
| Bacteria | Serratia sp. ATCC 39006 | 8 |
| Bacteria | Avibacterium endocarditidis | 2 |
| Bacteria | Lactobacillus amylophilus DSM 20533 = JCM 1125 | 2 |
| Bacteria | Devosia insulae DS-56 | 1 |
| Bacteria | Sphingomonas sp. Leaf29 | 1 |
| Bacteria | Oceanospirillales bacterium TMED91 | 1 |
| Bacteria | Diaminobutyricimonas aerilata | 2 |
| Bacteria | Saccharospirillum sp. MSK14-1 | 1 |
| Invertebrates | Daphnia pulex | 4 |
| Bacteria | bacterium endosymbiont of Pedicinus badii | 1 |
| Bacteria | Treponema sp. CETP13 | 6 |
| Bacteria | Pseudopropionibacterium propionicum F0230a | 2 |
| Bacteria | Desulfurispirillum indicum S5 | 1 |
| Bacteria | Leminorella grimontii ATCC 33999 = DSM 5078 | 5 |
| Bacteria | Pseudodesulfovibrio piezophilus C1TLV30 | 1 |
| Bacteria | Serratia symbiotica str. 'Cinara cedri' | 2 |
| Bacteria | Streptococcus pneumoniae Hungary19A-6 | 2 |
| Bacteria | Methylobacterium radiotolerans | 1 |
| Bacteria | Comamonadaceae bacterium OH2545_COT-014 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.15.1.1 | 1 |
| Bacteria | Gordonia amarae NBRC 15530 | 2 |
| Bacteria | Bosea lathyri | 2 |
| Environmental samples | Firmicutes bacterium CAG:882 | 1 |
| Invertebrates | Onchocerca flexuosa | 5 |
| Bacteria | Sphingomonas sp. LK11 | 1 |
| Bacteria | Neisseria flavescens SK114 | 1 |
| Bacteria | Sphingopyxis sp. QXT-31 | 1 |
| Bacteria | Cnuibacter physcomitrellae | 3 |
| Bacteria | Phycisphaerae bacterium SM23_30 | 3 |
| Bacteria | Epulopiscium sp. Nuni2H_MBin001 | 1 |
| Bacteria | Ochrobactrum lupini | 2 |
| Bacteria | Aquimonas voraii | 1 |
| Bacteria | Pedosphaera sp. Tous-C6FEB | 1 |
| Bacteria | Erysipelothrix rhusiopathiae ATCC 19414 | 4 |
| Bacteria | Geodermatophilus ruber | 1 |
| Bacteria | Pseudomonas lundensis | 3 |
| Bacteria | Allochromatium vinosum DSM 180 | 1 |
| Bacteria | Pseudonocardia sp. Ae707_Ps1 | 1 |
| Bacteria | Streptomyces kanasensis | 1 |
| Vertebrates | Leucoraja erinacea | 3 |
| Bacteria | Sphingobium sp. IP1 | 1 |
| Bacteria | Enterococcus faecalis ERV41 | 2 |
| Bacteria | Roseburia intestinalis L1-82 | 1 |
| Bacteria | Methylorubrum salsuginis | 2 |
| Bacteria | Entomoplasmatales bacterium EntAcro1 | 1 |
| Bacteria | Rouxiella silvae | 4 |
| Bacteria | Beggiatoa sp. IS2 | 2 |
| Bacteria | Buttiauxella brennerae ATCC 51605 | 6 |
| Invertebrates | Clonorchis sinensis | 3 |
| Bacteria | Kutzneria buriramensis | 2 |
| Bacteria | Rhodobacter sp. BACL10 MAG-121220-bin24 | 1 |
| Bacteria | Streptomyces sp. MOE7 | 1 |
| Bacteria | Phenylobacterium sp. Root1277 | 1 |
| Bacteria | Bacillus sp. SUBG0010 | 1 |
| Bacteria | Vibrio sp. T9 | 2 |
| Bacteria | Cryobacterium roopkundense | 4 |
| Invertebrates | Oikopleura dioica | 3 |
| Bacteria | Vibrio palustris | 4 |
| Bacteria | Faecalibacterium sp. AF28-13AC | 1 |
| Bacteria | Marinobacter hydrocarbonoclasticus ATCC 49840 | 1 |
| Bacteria | Paenibacillus sp. Leaf72 | 3 |
| Bacteria | Kosakonia oryzae | 1 |
| Invertebrates | Operophtera brumata | 1 |
| Bacteria | Microbacterium aurum | 3 |
| Bacteria | Exiguobacterium chiriqhucha RW-2 | 6 |
| Bacteria | Pelagibacteraceae bacterium TMED124 | 1 |
| Bacteria | Thiotrichales bacterium SG8_50 | 1 |
| Bacteria | Jeotgalibaca sp. H21T32 | 3 |
| Bacteria | Bacillus sp. SJS | 3 |
| Bacteria | Vibrio vulnificus | 4 |
| Bacteria | Pelagibacterium sp. SCN 64-44 | 4 |
| Bacteria | Fibrobacter sp. UWOV1 | 1 |
| Bacteria | Gemmatimonas aurantiaca T-27 | 2 |
| Bacteria | Marinobacter guineae | 1 |
| Bacteria | Plesiomonas shigelloides | 1 |
| Environmental samples | Butyrivibrio sp. CAG:318 | 1 |
| Bacteria | Glaciecola pallidula DSM 14239 = ACAM 615 | 1 |
| Bacteria | Streptomyces sp. TSRI0281 | 1 |
| Bacteria | candidate division Zixibacteria bacterium RBG_16_40_9 | 1 |
| Bacteria | Teredinibacter turnerae T7901 | 1 |
| Bacteria | Woeseia oceani | 1 |
| Bacteria | Variovorax sp. | 1 |
| Bacteria | Clavibacter michiganensis subsp. sepedonicus | 5 |
| Invertebrates | Onchocerca ochengi | 4 |
| Bacteria | Buchnera aphidicola str. Ua (Uroleucon ambrosiae) | 1 |
| Bacteria | Vibrio thalassae | 4 |
| Bacteria | Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_64_13 | 1 |
| Bacteria | Streptococcus pneumoniae CGSP14 | 2 |
| Bacteria | Phenylobacterium sp. SCN 69-14 | 1 |
| Bacteria | Vibrio nigripulchritudo | 2 |
| Bacteria | Microbacterium laevaniformans | 3 |
| Bacteria | Staphylococcus aureus subsp. aureus USA300 | 6 |
| Bacteria | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 | 3 |
| Bacteria | Pseudomonas sp. PGPPP4 | 2 |
| Bacteria | Idiomarina baltica OS145 | 1 |
| Bacteria | Enterococcus sp. 3G6_DIV0642 | 5 |
| Bacteria | Smithella sp. F21 | 1 |
| Bacteria | Glaesserella parasuis D74 | 1 |
| Bacteria | Mesorhizobium sp. WSM1497 | 3 |
| Bacteria | Comamonadaceae bacterium CG_4_9_14_0_8_um_filter_57_21 | 1 |
| Bacteria | Agrobacterium radiobacter K84 | 2 |
| Bacteria | Candidatus Eisenbacteria bacterium RBG_16_71_46 | 2 |
| Bacteria | Microbacterium mangrovi | 3 |
| Bacteria | bacterium HR30 | 2 |
| Invertebrates | Caenorhabditis brenneri | 5 |
| Bacteria | Hyphomonas sp. TMED17 | 1 |
| Bacteria | Escherichia fergusonii ECD227 | 1 |
| Bacteria | Pantoea sp. aB | 3 |
| Bacteria | Planctomycetes bacterium SCN 63-9 | 1 |
| Bacteria | Clavibacter michiganensis subsp. michiganensis NCPPB 382 | 3 |
| Bacteria | Candidatus Omnitrophica bacterium ADurb.Bin314 | 3 |
| Bacteria | Desulfobacterales bacterium RIFOXYA12_FULL_46_15 | 3 |
| Bacteria | Streptococcus constellatus | 2 |
| Bacteria | Caulobacterales bacterium 32-67-6 | 1 |
| Invertebrates | Echinococcus granulosus | 3 |
| Bacteria | Pelobacter acetylenicus | 2 |
| Bacteria | Rhizobium sp. Root149 | 1 |
| Bacteria | Corynebacterium ammoniagenes DSM 20306 | 3 |
| Bacteria | Mycoplasma hyopneumoniae J | 2 |
| Bacteria | Streptomyces luteoverticillatus | 2 |
| Environmental samples | Veillonella sp. CAG:933 | 1 |
| Bacteria | Rhodobacteraceae bacterium CH30 | 1 |
| Invertebrates | Hymenolepis diminuta | 4 |
| Bacteria | candidate division BRC1 bacterium SM23_51 | 2 |
| Bacteria | Paracoccus alkenifer | 1 |
| Bacteria | Geofilum rubicundum JCM 15548 | 1 |
| Environmental samples | uncultured Lachnospira sp. | 1 |
| Bacteria | Sporomusa sp. An4 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.05.1.1 | 1 |
| Bacteria | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 8 |
| Bacteria | Akkermansia sp. 54_46 | 1 |
| Bacteria | Actinoplanes missouriensis 431 | 1 |
| Bacteria | Burkholderia dabaoshanensis | 1 |
| Invertebrates | Hymenolepis nana | 3 |
| Bacteria | Escherichia coli UTI89 | 2 |
| Bacteria | Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133 | 1 |
| Bacteria | Streptomyces sp. WAC07149 | 1 |
| Bacteria | Thermoanaerobacter ethanolicus JW 200 | 4 |
| Bacteria | Salmonella enterica subsp. indica | 2 |
| Bacteria | Dechloromonas sp. HYN0024 | 1 |
| Bacteria | Veillonella seminalis ACS-216-V-Col6b | 1 |
| Bacteria | Deinococcus radiophilus | 2 |
| Bacteria | Asticcacaulis sp. 32-58-5 | 1 |
| Bacteria | Geobacillus sp. Y412MC52 | 2 |
| Bacteria | Candidatus Tachikawaea gelatinosa | 1 |
| Plants and Fungi | Colletotrichum gloeosporioides Cg-14 | 1 |
| Bacteria | Bacillus sp. V-88 | 1 |
| Bacteria | Streptomyces sp. WAC04770 | 1 |
| Bacteria | Bacillus bacterium | 2 |
| Bacteria | Methyloceanibacter marginalis | 1 |
| Vertebrates | Tribolodon hakonensis | 1 |
| Bacteria | Alcanivorax hongdengensis A-11-3 | 1 |
| Bacteria | Coxiellaceae bacterium | 1 |
| Bacteria | Xanthomonas phaseoli pv. phaseoli | 2 |
| Bacteria | Mycetocola manganoxydans | 3 |
| Bacteria | Altererythrobacter namhicola | 1 |
| Bacteria | gamma proteobacterium HTCC5015 | 1 |
| Invertebrates | Apis cerana cerana | 2 |
| Bacteria | Streptomyces sp. NRRL WC-3618 | 1 |
| Bacteria | Chromobacterium haemolyticum | 2 |
| Environmental samples | Firmicutes bacterium CAG:308 | 3 |
| Bacteria | Tistlia consotensis USBA 355 | 1 |
| Bacteria | Deltaproteobacteria bacterium RBG_16_54_18 | 1 |
| Bacteria | Xanthomonas phaseoli pv. syngonii LMG 9055 | 1 |
| Bacteria | Azospirillum doebereinerae | 3 |
| Bacteria | Chlorobi bacterium OLB6 | 1 |
| Bacteria | Pacificibacter maritimus | 1 |
| Bacteria | Treponema pallidum subsp. endemicum str. Bosnia A | 2 |
| Bacteria | Chlamydia muridarum | 1 |
| Bacteria | Acidobacteria bacterium RBG_16_68_9 | 1 |
| Bacteria | Amylibacter cionae | 1 |
| Plants and Fungi | Symbiodinium microadriaticum | 1 |
| Bacteria | Streptomyces sp. SCSIO 03032 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Rough O:d:1,7 | 7 |
| Invertebrates | Trichoplax sp. H2 | 3 |
| Bacteria | Lactobacillus mucosae DSM 13345 | 3 |
| Bacteria | Rhodococcus sp. 1168 | 1 |
| Bacteria | Asanoa hainanensis | 1 |
| Bacteria | Streptococcus infantis | 1 |
| Bacteria | Acetobacterium bakii | 2 |
| Bacteria | Cellvibrio sp. BR | 1 |
| Bacteria | Paenibacillus bovis | 5 |
| Bacteria | Butyrivibrio proteoclasticus | 1 |
| Bacteria | Negativicoccus succinicivorans DORA_17_25 | 1 |
| Bacteria | Moraxella caviae | 1 |
| Bacteria | Bradyrhizobium diazoefficiens | 1 |
| Bacteria | Rhizobium sp. RMa-01 | 2 |
| Invertebrates | Strongyloides venezuelensis | 4 |
| Bacteria | Lactobacillus apodemi DSM 16634 = JCM 16172 | 2 |
| Bacteria | Streptomyces roseochromogenus subsp. oscitans DS 12.976 | 2 |
| Bacteria | Anaerotruncus sp. 1XD22-93 | 1 |
| Bacteria | Rubellimicrobium thermophilum DSM 16684 | 2 |
| Bacteria | Elusimicrobia bacterium RIFOXYA12_FULL_57_11 | 1 |
| Bacteria | Salmonella bongori | 2 |
| Bacteria | Caloranaerobacter sp. TR13 | 2 |
| Bacteria | Desulfococcus oleovorans Hxd3 | 3 |
| Bacteria | Leuconostoc gelidum JB7 | 2 |
| Environmental samples | Dorea sp. CAG:317 | 2 |
| Bacteria | Halolactibacillus alkaliphilus | 6 |
| Bacteria | Candidatus Magnetoglobus multicellularis str. Araruama | 2 |
| Bacteria | Pseudomonas aeruginosa PAO1 | 2 |
| Bacteria | Thalassolituus oleivorans R6-15 | 1 |
| Bacteria | Streptomyces davaonensis JCM 4913 | 1 |
| Bacteria | Mesorhizobium sp. B2.3 | 1 |
| Bacteria | Burkholderia pseudomallei MSHR4000 | 1 |
| Bacteria | Klebsiella sp. FDAARGOS_511 | 1 |
| Bacteria | Sphingobium sp. GW456-12-10-14-TSB1 | 1 |
| Bacteria | Sphingomonas sp. NFR15 | 2 |
| Bacteria | Curtobacterium sp. YR515 | 3 |
| Bacteria | Pseudomonas syringae pv. pisi | 1 |
| Bacteria | Mycoplasma hyorhinis SK76 | 3 |
| Bacteria | Gammaproteobacteria bacterium CG12_big_fil_rev_8_21_14_0_65_46_12 | 1 |
| Bacteria | Rhizobium sp. CF142 | 2 |
| Bacteria | Lactobacillus uvarum DSM 19971 | 2 |
| Bacteria | Roseibacillus sp. TMED18 | 1 |
| Bacteria | Alteromonadaceae bacterium Bs31 | 1 |
| Bacteria | Lentisphaerae bacterium GWF2_50_93 | 6 |
| Bacteria | Sedimenticola thiotaurini | 1 |
| Bacteria | Arthrobacter sp. Leaf234 | 3 |
| Bacteria | Salana multivorans | 1 |
| Bacteria | Oribacterium sp. oral taxon 108 str. F0425 | 1 |
| Bacteria | Pectobacterium carotovorum subsp. carotovorum PC1 | 1 |
| Bacteria | Pseudomonas syringae CC1557 | 1 |
| Bacteria | Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 | 1 |
| Bacteria | OM182 bacterium MED-G28 | 1 |
| Bacteria | Gemmatimonadetes bacterium RIFCSPLOWO2_02_FULL_71_11 | 2 |
| Bacteria | Aminobacter aminovorans | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.06.1.1 | 1 |
| Bacteria | Motiliproteus sp. MSK22-1 | 1 |
| Bacteria | Sinorhizobium sp. Sb3 | 2 |
| Bacteria | Pseudonocardia oroxyli | 1 |
| Bacteria | Stappia indica | 1 |
| Bacteria | Candidatus Streptomyces philanthi | 3 |
| Bacteria | Leifsonia xyli subsp. xyli str. CTCB07 | 4 |
| Bacteria | Candidatus Rokubacteria bacterium 13_1_20CM_2_69_58 | 1 |
| Bacteria | Ignavibacteria bacterium CG_4_9_14_3_um_filter_36_18 | 3 |
| Bacteria | Francisella sp. TX077308 | 1 |
| Bacteria | Cobetia sp. UCD-24C | 1 |
| Bacteria | Antarctobacter heliothermus | 1 |
| Bacteria | Roseovarius sp. TE539 | 1 |
| Bacteria | Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 | 1 |
| Bacteria | Paracoccus homiensis | 1 |
| Bacteria | Veillonella parvula ACS-068-V-Sch12 | 1 |
| Bacteria | Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_46_11 | 1 |
| Bacteria | Sphingomonadales bacterium EhC05 | 1 |
| Bacteria | Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 | 1 |
| Bacteria | Corynebacterium pyruviciproducens | 1 |
| Bacteria | Planococcus halocryophilus | 2 |
| Bacteria | Hydrogenophilales bacterium RIFOXYD1_FULL_62_11 | 1 |
| Bacteria | Paracoccus sp. BM15 | 1 |
| Bacteria | Thalassospira sp. TSL5-1 | 1 |
| Bacteria | Desulfovibrio sp. X2 | 1 |
| Bacteria | Colwellia sp. Bg11-28 | 1 |
| Bacteria | Cosenzaea myxofaciens ATCC 19692 | 3 |
| Bacteria | Paenibacillus tyrfis | 3 |
| Bacteria | Sphingomonas oleivorans | 2 |
| Bacteria | Rhodothermaceae bacterium TMED105 | 2 |
| Bacteria | Clostridium sp. AM32-2 | 1 |
| Vertebrates | Phalacrocorax carbo | 2 |
| Bacteria | Corynebacterium aquilae DSM 44791 | 1 |
| Bacteria | Rhizobium grahamii CCGE 502 | 1 |
| Bacteria | Candidatus Puniceispirillum marinum IMCC1322 | 1 |
| Bacteria | Rhizobium loessense | 1 |
| Bacteria | Klenkia soli | 2 |
| Bacteria | Puniceibacterium sp. IMCC21224 | 1 |
| Bacteria | Azoarcus sp. CIB | 1 |
| Bacteria | Rhodobacteraceae bacterium FSX-11 | 1 |
| Bacteria | Spiroplasma endosymbiont of Drosophila wheeleri | 1 |
| Bacteria | Chromohalobacter japonicus | 2 |
| Bacteria | Sphingobium baderi | 2 |
| Bacteria | Ochrobactrum sp. P6BS-III | 1 |
| Bacteria | Novosphingobium sp. Fuku2-ISO-50 | 1 |
| Bacteria | Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120924-bin69 | 2 |
| Bacteria | Colwellia chukchiensis | 1 |
| Bacteria | Flavobacteriaceae bacterium TMED48 | 1 |
| Bacteria | Zimmermannella sp. YIM 102482-1 | 3 |
| Bacteria | Rhodobacter sp. LPB0142 | 2 |
| Bacteria | Proteus vulgaris | 1 |
| Bacteria | Rhodococcus sp. WMMA185 | 1 |
| Bacteria | Betaproteobacteria bacterium SG8_39 | 1 |
| Bacteria | Bacillus amyloliquefaciens | 4 |
| Bacteria | Methylobacterium indicum | 1 |
| Bacteria | Proteus hauseri | 1 |
| Bacteria | Clostridium sp. K25 | 1 |
| Bacteria | Streptomyces sp. AC230 | 2 |
| Bacteria | Alysiella filiformis DSM 16848 | 1 |
| Bacteria | Bifidobacterium breve HPH0326 | 1 |
| Bacteria | Paracoccus sphaerophysae | 1 |
| Bacteria | Alphaproteobacteria bacterium MarineAlpha3_Bin5 | 1 |
| Bacteria | Anaeromyxobacter sp. PSR-1 | 2 |
| Bacteria | Hyphomicrobium sp. GJ21 | 1 |
| Bacteria | Bordetella sp. J329 | 1 |
| Bacteria | Trueperella pyogenes | 1 |
| Bacteria | Planctomycetes bacterium SM23_65 | 2 |
| Bacteria | Acidovorax temperans | 1 |
| Bacteria | Xanthomonas campestris pv. raphani 756C | 1 |
| Bacteria | Marivita hallyeonensis | 1 |
| Bacteria | Clostridium botulinum B str. Osaka05 | 1 |
| Bacteria | Lactobacillus futsaii JCM 17355 | 2 |
| Bacteria | Nocardioides sp. CCTCC AB 2018079 | 1 |
| Bacteria | Vibrio sp. SBT000027 | 1 |
| Bacteria | Hartmannibacter diazotrophicus | 1 |
| Bacteria | Alicycliphilus denitrificans K601 | 1 |
| Invertebrates | Sepia officinalis | 2 |
| Bacteria | Verrucomicrobia bacterium TMED175 | 1 |
| Bacteria | Lysobacter gummosus | 1 |
| Bacteria | Tropicimonas sediminicola | 1 |
| Bacteria | Rhodoplanes sp. Z2-YC6860 | 2 |
| Bacteria | Pseudoramibacter alactolyticus ATCC 23263 | 2 |
| Bacteria | Thermoanaerobacterium aotearoense SCUT27 | 1 |
| Bacteria | Salmonella enterica subsp. arizonae serovar 41:z4,z23:- str. 01-0089 | 4 |
| Bacteria | Oceanobacter sp. | 1 |
| Bacteria | Butyrivibrio sp. ob235 | 1 |
| Bacteria | Brucella melitensis ATCC 23457 | 1 |
| Bacteria | Pseudonocardia sp. HH130630-07 | 1 |
| Bacteria | Mycolicibacterium aromaticivorans JS19b1 = JCM 16368 | 1 |
| Bacteria | Candidatus Paraburkholderia kirkii UZHbot1 | 1 |
| Bacteria | Thiomonas delicata | 1 |
| Bacteria | Sulfitobacter pontiacus | 1 |
| Environmental samples | Clostridium sp. CAG:7 | 3 |
| Bacteria | Betaproteobacteria bacterium UKL13-2 | 1 |
| Bacteria | Enterococcus faecalis CBRD01 | 4 |
| Bacteria | candidate division WOR-3 bacterium JGI_Cruoil_03_44_89 | 4 |
| Bacteria | Edwardsiella tarda FL6-60 | 2 |
| Bacteria | Nitrosomonas sp. AL212 | 1 |
| Bacteria | Gordonia sihwensis NBRC 108236 | 1 |
| Bacteria | Lactobacillus johnsonii DPC 6026 | 1 |
| Bacteria | Pseudohaliea rubra DSM 19751 | 1 |
| Bacteria | Citrobacter braakii | 3 |
| Bacteria | Alphaproteobacteria bacterium 13_2_20CM_2_64_7 | 1 |
| Bacteria | Mesorhizobium sp. WSM3876 | 1 |
| Bacteria | Erysipelatoclostridium sp. An173 | 3 |
| Bacteria | Treponema denticola OTK | 1 |
| Bacteria | Enterobacteriaceae bacterium 9_2_54FAA | 1 |
| Bacteria | Agrobacterium fabrum str. C58 | 1 |
| Bacteria | Burkholderiales bacterium 39-55-53 | 1 |
| Bacteria | Stenotrophomonas humi | 1 |
| Bacteria | Thalassobacter sp. 16PALIMAR09 | 1 |
| Bacteria | Alcaligenes faecalis | 1 |
| Environmental samples | hydrothermal vent metagenome | 2 |
| Bacteria | Salmonella enterica subsp. enterica serovar Kentucky | 6 |
| Bacteria | Paraburkholderia bryophila | 1 |
| Bacteria | Anaeromyxobacter sp. Fw109-5 | 2 |
| Bacteria | Pseudomonas sp. Root9 | 1 |
| Bacteria | Oceanobacillus sp. E9 | 4 |
| Bacteria | Planococcus plakortidis | 1 |
| Bacteria | Aerococcus sp. HMSC061A03 | 2 |
| Bacteria | Massilia sp. YMA4 | 1 |
| Bacteria | Streptomyces sp. Ru73 | 3 |
| Bacteria | Geobacter sulfurreducens PCA | 1 |
| Bacteria | Deltaproteobacteria bacterium 13_1_20CM_2_69_21 | 1 |
| Bacteria | Pseudomonadales bacterium GWC1_66_9 | 1 |
| Bacteria | Microbacterium sp. 71-23 | 1 |
| Bacteria | Cribrihabitans marinus | 1 |
| Bacteria | Myxococcus hansupus | 2 |
| Bacteria | Mesorhizobium sp. Primo-A | 1 |
| Bacteria | Paraburkholderia caribensis | 1 |
| Bacteria | Microbacteriaceae bacterium BACL25 MAG-120322-bin65 | 1 |
| Bacteria | Mycoplasma glycophilum | 1 |
| Bacteria | Methylobacterium pseudosasicola | 1 |
| Bacteria | Sphingosinicella sp. QZX222 | 1 |
| Bacteria | Paraburkholderia sp. DHOC27 | 1 |
| Bacteria | Azospirillum sp. TSH20 | 1 |
| Bacteria | Microbacterium oxydans | 3 |
| Bacteria | Salipiger mucosus DSM 16094 | 1 |
| Bacteria | Lachnoanaerobaculum sp. MSX33 | 1 |
| Bacteria | Burkholderia pseudomallei 668 | 1 |
| Bacteria | Sphingomonas sp. 28-62-11 | 1 |
| Bacteria | Fervidobacterium changbaicum | 1 |
| Bacteria | Bosea robiniae | 1 |
| Bacteria | Gemmatimonadetes bacterium 13_1_40CM_2_60_3 | 1 |
| Bacteria | Geomicrobium sp. JCM 19037 | 1 |
| Bacteria | Desulfuromonadaceae bacterium GWC2_58_13 | 3 |
| Bacteria | Streptomyces sp. CNZ279 | 3 |
| Bacteria | Planctomycetes bacterium HGW-Planctomycetes-2 | 1 |
| Bacteria | Kibdelosporangium sp. MJ126-NF4 | 1 |
| Bacteria | Chlamydia avium 10DC88 | 1 |
| Bacteria | Burkholderia thailandensis E264 | 1 |
| Bacteria | Deinococcus indicus | 1 |
| Bacteria | Salinivibrio sp. IB872 | 1 |
| Bacteria | Candidatus Marinimicrobia bacterium CG08_land_8_20_14_0_20_45_22 | 2 |
| Bacteria | Candidatus Hepatoplasma crinochetorum | 1 |
| Bacteria | Ochrobactrum sp. MH181795 | 2 |
| Bacteria | Clostridium colicanis 209318 | 4 |
| Bacteria | Arenimonas malthae CC-JY-1 | 1 |
| Bacteria | Ignavibacteria bacterium RIFOXYC2_FULL_35_21 | 1 |
| Bacteria | Omnitrophica WOR_2 bacterium RIFCSPLOWO2_01_FULL_41_12 | 1 |
| Bacteria | Paracoccus sp. M1-83 | 1 |
| Bacteria | Marinimicrobium sp. | 1 |
| Bacteria | Rhodococcus fascians D188 | 1 |
| Bacteria | Enterococcus sp. 2G9_DIV0600 | 2 |
| Bacteria | Rhodomicrobium vannielii ATCC 17100 | 1 |
| Bacteria | Treponema paraluiscuniculi Cuniculi A | 1 |
| Bacteria | Caulobacter sp. 602-1 | 1 |
| Bacteria | Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18 | 1 |
| Bacteria | Agromyces sp. MF30-A | 1 |
| Bacteria | Photobacterium damselae subsp. damselae | 1 |
| Bacteria | Actinoalloteichus hymeniacidonis | 1 |
| Bacteria | Erythrobacter sp. JL475 | 1 |
| Bacteria | Mycolicibacterium agri | 1 |
| Bacteria | Streptomyces jeddahensis | 1 |
| Bacteria | Streptomyces bingchenggensis BCW-1 | 1 |
| Bacteria | Hydrogenophaga sp. IBVHS2 | 1 |
| Bacteria | Limnohabitans sp. Hippo4 | 1 |
| Bacteria | Zetaproteobacteria bacterium CG2_30_46_52 | 1 |
| Bacteria | Burkholderia cenocepacia J2315 | 1 |
| Bacteria | Corynebacterium pollutisoli | 1 |
| Bacteria | Albidovulum inexpectatum | 1 |
| Bacteria | Klenkia taihuensis | 2 |
| Bacteria | Paracoccus chinensis | 1 |
| Bacteria | Natrialba asiatica DSM 12278 | 1 |
| Bacteria | Megasphaera paucivorans | 1 |
| Environmental samples | Acetobacter sp. CAG:977 | 1 |
| Bacteria | Advenella kashmirensis WT001 | 1 |
| Bacteria | Methylocapsa palsarum | 3 |
| Bacteria | Gallionellaceae bacterium CG1_02_60_948 | 1 |
| Bacteria | Mycobacterium sp. NAZ190054 | 1 |
| Bacteria | Nitrosococcus oceani C-27 | 1 |
| Bacteria | Candidatus Thioglobus sp. MED-G23 | 1 |
| Bacteria | Solemya pervernicosa gill symbiont | 1 |
| Bacteria | Nocardioides terrae | 1 |
| Bacteria | Lactobacillus delbrueckii subsp. lactis | 1 |
| Bacteria | Acidihalobacter ferrooxidans | 1 |
| Bacteria | Bacillus cereus ATCC 10987 | 1 |
| Bacteria | Lautropia sp. SCN 70-15 | 1 |
| Bacteria | Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 | 4 |
| Plants and Fungi | Tilletia caries | 1 |
| Bacteria | Lysobacter pythonis | 1 |
| Bacteria | Bacillus sp. AFS017274 | 1 |
| Bacteria | Jonesia denitrificans DSM 20603 | 1 |
| Bacteria | Wenxinia marina DSM 24838 | 1 |
| Bacteria | Cupriavidus basilensis | 1 |
| Bacteria | Microterricola viridarii | 1 |
| Bacteria | Methylophaga lonarensis MPL | 1 |
| Bacteria | Pelistega indica | 1 |
| Bacteria | bacterium 2013Arg42i | 1 |
| Bacteria | Thermodesulfatator indicus DSM 15286 | 1 |
| Bacteria | Lactococcus raffinolactis 4877 | 3 |
| Bacteria | Buchnera aphidicola (Aphis glycines) | 1 |
| Bacteria | candidate division Zixibacteria bacterium SM1_73 | 2 |
| Bacteria | Shimia abyssi | 1 |
| Bacteria | Massilia sp. KIM | 1 |
| Bacteria | Anaerobranca californiensis DSM 14826 | 1 |
| Bacteria | Vibrio gazogenes | 2 |
| Bacteria | Idiomarina atlantica | 1 |
| Bacteria | Thermoplasmatales archaeon SG8-52-3 | 1 |
| Bacteria | Gemmatimonadetes bacterium RBG_16_66_8 | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.16.1.1 | 1 |
| Bacteria | Mycolicibacterium chlorophenolicum | 1 |
| Bacteria | Variovorax sp. Root318D1 | 1 |
| Bacteria | Actinomyces oris | 1 |
| Bacteria | Candidatus Omnitrophica bacterium ADurb.Bin292 | 2 |
| Bacteria | Abyssibacter profundi | 1 |
| Invertebrates | Ascaris lumbricoides | 1 |
| Bacteria | Bacillus sp. 17376 | 1 |
| Bacteria | Denitrobacterium detoxificans | 1 |
| Mammals | Rhinolophus ferrumequinum | 1 |
| Bacteria | Sulfitobacter indolifex HEL-45 | 1 |
| Bacteria | Nitrincola lacisaponensis | 1 |
| Bacteria | Pseudomonas borbori | 2 |
| Bacteria | Burkholderia sp. WAC0059 | 1 |
| Bacteria | Rhizobium sp. PDO1-076 | 1 |
| Bacteria | Limimaricola pyoseonensis | 1 |
| Bacteria | gamma proteobacterium IMCC3088 | 1 |
| Bacteria | Pseudonocardia sp. Ae356_Ps1 | 1 |
| Bacteria | Agreia pratensis | 1 |
| Bacteria | Sphingomonas yabuuchiae | 1 |
| Bacteria | Eisenbergiella tayi | 2 |
| Bacteria | Sphingobium xenophagum | 1 |
| Bacteria | Paenibacillus sp. 7541 | 4 |
| Bacteria | Cellulomonas sp. Leaf395 | 1 |
| Bacteria | Halomonas sp. DQ26W | 1 |
| Bacteria | Pectobacterium betavasculorum | 1 |
| Bacteria | Osedax symbiont Rs1 | 1 |
| Bacteria | Acidithiobacillus ferrooxidans ATCC 23270 | 1 |
| Bacteria | Mesorhizobium sp. AP09 | 1 |
| Bacteria | Pseudoalteromonas sp. | 1 |
| Bacteria | Cupriavidus sp. SK-3 | 1 |
| Bacteria | Anoxybacillus suryakundensis | 1 |
| Bacteria | Streptomyces zhaozhouensis | 1 |
| Bacteria | Vibrio albensis VL426 | 1 |
| Bacteria | Singulisphaera sp. GP187 | 1 |
| Bacteria | Halogranum rubrum | 1 |
| Bacteria | Streptosporangium nondiastaticum | 1 |
| Bacteria | Frateuria aurantia DSM 6220 | 1 |
| Bacteria | Halalkalicoccus paucihalophilus | 1 |
| Bacteria | Rhodobacterales bacterium 32-67-9 | 1 |
| Bacteria | Alistipes finegoldii | 1 |
| Bacteria | Collinsella aerofaciens ATCC 25986 | 1 |
| Bacteria | Rubritalea profundi | 1 |
| Bacteria | Thiocystis violascens DSM 198 | 1 |
| Bacteria | Limimaricola soesokkakensis | 1 |
| Bacteria | Zymomonas mobilis subsp. mobilis | 1 |
| Bacteria | Brevibacterium sandarakinum | 1 |
| Bacteria | Acidithiobacillus caldus SM-1 | 1 |
| Bacteria | Syntrophobacterales bacterium CG03_land_8_20_14_0_80_58_14 | 1 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_19FT_COMBO_65_30 | 1 |
| Bacteria | Sphingomonas sp. TDK1 | 1 |
| Bacteria | Pseudomonas sp. URMO17WK12:I10 | 1 |
| Bacteria | Candidatus Aminicenantes bacterium RBG_16_63_14 | 1 |
| Bacteria | Pseudomonas tremae | 1 |
| Bacteria | Escherichia albertii KF1 | 2 |
| Bacteria | Marinobacter sp. T13-3 | 1 |
| Bacteria | Rhizobium leguminosarum bv. phaseoli CCGM1 | 1 |
| Bacteria | Alcanivorax borkumensis SK2 | 1 |
| Bacteria | Globicatella sulfidifaciens DSM 15739 | 1 |
| Bacteria | Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10 | 1 |
| Bacteria | Pectobacterium carotovorum subsp. actinidiae | 1 |
| Bacteria | Devosia crocina | 1 |
| Bacteria | Neisseria gonorrhoeae | 1 |
| Bacteria | Nitratireductor basaltis | 1 |
| Bacteria | Rhodococcus pyridinivorans AK37 | 1 |
| Bacteria | Celeribacter neptunius | 1 |
| Environmental samples | Firmicutes bacterium CAG:102 | 1 |
| Bacteria | Fusobacterium nucleatum subsp. nucleatum | 1 |
| Bacteria | Massilia timonae | 1 |
| Bacteria | Streptomyces caelestis | 1 |
| Bacteria | Belnapia rosea | 1 |
| Bacteria | Zetaproteobacteria bacterium CG12_big_fil_rev_8_21_14_0_65_55_1124 | 1 |
| Bacteria | Cellvibrionales bacterium TMED148 | 1 |
| Bacteria | Bacillus koreensis | 1 |
| Bacteria | Shigella boydii 5216-82 | 2 |
| Bacteria | Acidithiobacillus thiooxidans | 1 |
| Bacteria | Rhizobium sp. L18 | 1 |
| Environmental samples | Firmicutes bacterium CAG:212 | 1 |
| Bacteria | Sinobacteraceae bacterium GT1R17 | 1 |
| Bacteria | Lactobacillus salivarius cp400 | 2 |
| Bacteria | Staphylococcus epidermidis W23144 | 1 |
| Bacteria | Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_41_12 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.10.2.1 | 1 |
| Bacteria | Beggiatoa alba B18LD | 1 |
| Bacteria | Lactobacillus aviarius subsp. araffinosus DSM 20653 | 1 |
| Bacteria | Simplicispira sp. 125 | 1 |
| Bacteria | Bacillus sp. Soil531 | 3 |
| Bacteria | Cellulomonas cellasea DSM 20118 | 1 |
| Bacteria | Austwickia chelonae NBRC 105200 | 2 |
| Bacteria | Halomonas cupida | 1 |
| Bacteria | Thauera chlorobenzoica | 1 |
| Bacteria | Phycisphaera sp. | 2 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.006.04.2.1 | 2 |
| Bacteria | Legionella londiniensis | 1 |
| Bacteria | Staphylococcus epidermidis M23864:W2(grey) | 1 |
| Bacteria | Peptostreptococcaceae bacterium AS15 | 1 |
| Bacteria | Achromobacter sp. AONIH1 | 2 |
| Bacteria | Bifidobacterium asteroides | 3 |
| Bacteria | Salmonella enterica subsp. enterica serovar Gallinarum | 2 |
| Bacteria | Thauera sp. | 1 |
| Bacteria | Ferrimonas balearica DSM 9799 | 1 |
| Bacteria | Haloterrigena turkmenica DSM 5511 | 1 |
| Bacteria | Roseisalinus antarcticus | 1 |
| Bacteria | Deltaproteobacteria bacterium SM23_61 | 1 |
| Bacteria | Buchnera aphidicola str. Bp (Baizongia pistaciae) | 1 |
| Bacteria | Pseudodesulfovibrio indicus | 1 |
| Bacteria | Candidatus Accumulibacter aalborgensis | 1 |
| Bacteria | Nitrosomonas europaea | 1 |
| Bacteria | Sphingobium sp. Ant17 | 1 |
| Bacteria | Beggiatoa sp. PS | 1 |
| Environmental samples | uncultured marine bacterium EB000_55B11 | 1 |
| Bacteria | Dichotomicrobium thermohalophilum | 1 |
| Bacteria | Megasphaera sp. ASD88 | 1 |
| Bacteria | Nonomuraea wenchangensis | 1 |
| Bacteria | Pseudomonas coronafaciens pv. zizaniae | 1 |
| Bacteria | Marinobacter persicus | 1 |
| Bacteria | Roseovarius nanhaiticus | 1 |
| Bacteria | Sphingomonas sp. Leaf17 | 1 |
| Bacteria | Jannaschia sp. CCS1 | 1 |
| Bacteria | Candidatus Filomicrobium marinum | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.001.13.2.1 | 1 |
| Bacteria | Variovorax sp. DXTD-1 | 1 |
| Bacteria | Desulfobacterium sp. 4572_20 | 1 |
| Bacteria | gamma proteobacterium IMCC1989 | 1 |
| Bacteria | Rhodovulum sp. 12E13 | 1 |
| Bacteria | Absiella dolichum | 1 |
| Bacteria | Litoreibacter ponti | 1 |
| Bacteria | Ochrobactrum thiophenivorans | 1 |
| Bacteria | Leptospira borgpetersenii str. 200701203 | 1 |
| Bacteria | Roseomonas mucosa | 1 |
| Bacteria | candidate division Zixibacteria bacterium SM23_73_3 | 2 |
| Bacteria | Streptomyces griseoruber | 1 |
| Bacteria | Neisseria sicca ATCC 29256 | 1 |
| Bacteria | Thalassolituus sp. HI0120 | 1 |
| Bacteria | bacterium BRH_c32 | 1 |
| Bacteria | Zymomonas mobilis subsp. mobilis ATCC 10988 | 1 |
| Bacteria | Planococcus donghaensis | 1 |
| Bacteria | Brucella ceti str. Cudo | 1 |
| Bacteria | Peptostreptococcus sp. MV1 | 1 |
| Bacteria | Ruminococcus bromii | 1 |
| Bacteria | Methylibium sp. NZG | 1 |
| Bacteria | Pseudomonas gallaeciensis | 1 |
| Bacteria | Phenylobacterium sp. Root77 | 1 |
| Bacteria | Bacillus sp. DSM 27956 | 1 |
| Bacteria | Betaproteobacteria bacterium 13_1_20CM_3_63_8 | 1 |
| Bacteria | Alteromonas sp. TMED35 | 1 |
| Bacteria | Thioalkalivibrio halophilus | 1 |
| Bacteria | Roseburia sp. AM16-25 | 1 |
| Bacteria | Lysobacter sp. Root96 | 1 |
| Bacteria | Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 | 1 |
| Bacteria | [Eubacterium] eligens | 1 |
| Bacteria | Methylobacterium aquaticum | 1 |
| Bacteria | Marinobacter segnicrescens | 1 |
| Bacteria | Clostridium aceticum | 1 |
| Bacteria | Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_69_31 | 1 |
| Bacteria | Deltaproteobacteria bacterium ADurb.Bin022 | 1 |
| Bacteria | Streptomyces misionensis | 1 |
| Bacteria | Pseudobutyrivibrio sp. C4 | 1 |
| Bacteria | Methylobacterium sp. 4-46 | 1 |
| Bacteria | Treponema denticola ATCC 35404 | 1 |
| Bacteria | Roseivivax marinus | 1 |
| Bacteria | Dietzia cinnamea | 1 |
| Bacteria | Pseudoalteromonas sp. HM-SA03 | 1 |
| Bacteria | Melissococcus plutonius ATCC 35311 | 2 |
| Bacteria | Vibrio genomosp. F10 str. ZF-129 | 1 |
| Bacteria | Sphingopyxis sp. LPB0140 | 1 |
| Bacteria | Rhizobiales bacterium 64-17 | 1 |
| Bacteria | Mycolicibacterium setense | 1 |
| Bacteria | Buttiauxella agrestis | 1 |
| Bacteria | Ponticoccus marisrubri | 1 |
| Bacteria | Leucobacter sp. wl10 | 1 |
| Bacteria | Oenococcus kitaharae DSM 17330 | 1 |
| Bacteria | Rhizobium etli | 1 |
| Bacteria | Haemophilus parainfluenzae T3T1 | 2 |
| Bacteria | Aromatoleum aromaticum EbN1 | 1 |
| Bacteria | alpha proteobacterium AAP81b | 1 |
| Bacteria | Geodermatophilus obscurus DSM 43160 | 1 |
| Vertebrates | Buceros rhinoceros silvestris | 1 |
| Bacteria | Orrella dioscoreae | 1 |
| Bacteria | Pseudoalteromonas sp. TMED43 | 1 |
| Bacteria | Streptococcus sp. NLAE-zl-C503 | 1 |
| Bacteria | Pseudoalteromonas piratica | 1 |
| Bacteria | Sulfuricella denitrificans skB26 | 1 |
| Bacteria | Oxalobacteraceae bacterium IMCC9480 | 1 |
| Bacteria | Alicycliphilus denitrificans BC | 1 |
| Bacteria | Albimonas donghaensis | 1 |
| Bacteria | Verrucomicrobiaceae bacterium | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.CA.002.04.1.1 | 1 |
| Bacteria | Eubacterium ramulus ATCC 29099 | 1 |
| Bacteria | Mesorhizobium sp. M7A.F.Ca.US.001.01.1.1 | 1 |