The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
P-loop containing nucleotide triphosphate hydrolases
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 6: DNA-binding transcriptional regulator NtrC

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 29 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Phosphorelay response regulator activity GO:0000156
Responds to a phosphorelay sensor to initiate a change in cell state or activity. The activity of the response regulator is regulated by transfer of a phosphate from a histidine residue in the sensor, to an aspartate residue in the response regulator. Many but not all response regulators act as transcriptional regulators to elicit a response.
124 Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS)
(114 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
119 O67198 (/IPI) P07604 (/IPI) P07604 (/IPI) P07604 (/IPI) P07604 (/IPI) P07604 (/IPI) P07604 (/IPI) P07604 (/IPI) P07604 (/IPI) P07604 (/IPI)
(109 more)
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
107 P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA)
(97 more)
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
96 Q06065 (/ISS) Q06065 (/ISS) Q06065 (/ISS) Q06065 (/ISS) Q06065 (/ISS) Q06065 (/ISS) Q06065 (/ISS) Q06065 (/ISS) Q06065 (/ISS) Q06065 (/ISS)
(86 more)
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
80 P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA)
(70 more)
Bacterial-type RNA polymerase enhancer sequence-specific DNA binding GO:0001150
Interacting selectively and non-covalently with a sequence of DNA that is an enhancer region that helps activate transcription of a gene or operon by a bacterial-type RNA polymerase. Enhancers for sigma-54 holoenzymes are typically located 80 to 150 base pairs upstream from the transcription start site, although they can be further away or may be downstream of the promoter. Some transcription units dependent on sigma-70 holoenzymes may also include enhancer sequences.
74 P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA) P0AFU4 (/IDA)
(64 more)
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
48 P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA)
(38 more)
Phosphorelay response regulator activity GO:0000156
Responds to a phosphorelay sensor to initiate a change in cell state or activity. The activity of the response regulator is regulated by transfer of a phosphate from a histidine residue in the sensor, to an aspartate residue in the response regulator. Many but not all response regulators act as transcriptional regulators to elicit a response.
44 P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP)
(34 more)
DNA-binding transcription activator activity GO:0001216
Interacting selectively and non-covalently with a specific DNA sequence in order to activate or increase the frequency, rate or extent of transcription by a RNA polymerase.
39 G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP)
(29 more)
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
35 G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP)
(25 more)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
30 P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA)
(20 more)
DNA-binding transcription repressor activity GO:0001217
Interacting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase.
29 G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP)
(19 more)
Ornithine decarboxylase inhibitor activity GO:0008073
The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase.
29 Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA)
(19 more)
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
28 G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI)
(18 more)
DNA-binding transcription activator activity GO:0001216
Interacting selectively and non-covalently with a specific DNA sequence in order to activate or increase the frequency, rate or extent of transcription by a RNA polymerase.
28 G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI)
(18 more)
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
27 A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA)
(17 more)
DNA-binding transcription activator activity GO:0001216
Interacting selectively and non-covalently with a specific DNA sequence in order to activate or increase the frequency, rate or extent of transcription by a RNA polymerase.
27 A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA)
(17 more)
Proximal promoter sequence-specific DNA binding GO:0000987
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter. The proximal promoter is in cis with and relatively close to the core promoter.
22 G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA)
(12 more)
Cyclic-di-GMP binding GO:0035438
Interacting selectively and non-covalently with cyclic-di-GMP, cyclic dimeric guanosine monophosphate.
22 G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA)
(12 more)
Cyclic-di-GMP binding GO:0035438
Interacting selectively and non-covalently with cyclic-di-GMP, cyclic dimeric guanosine monophosphate.
22 G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI)
(12 more)
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
21 P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA)
(11 more)
DNA-binding transcription repressor activity GO:0001217
Interacting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase.
18 G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI)
(8 more)
Ferrous iron binding GO:0008198
Interacting selectively and non-covalently with ferrous iron, Fe(II).
18 P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA)
(8 more)
Nitric oxide binding GO:0070026
Interacting selectively and non-covalently with nitric oxide (NO).
18 P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA) P37013 (/IDA)
(8 more)
Phosphorelay response regulator activity GO:0000156
Responds to a phosphorelay sensor to initiate a change in cell state or activity. The activity of the response regulator is regulated by transfer of a phosphate from a histidine residue in the sensor, to an aspartate residue in the response regulator. Many but not all response regulators act as transcriptional regulators to elicit a response.
13 P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA)
(3 more)
Phosphatase activity GO:0016791
Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
10 Q9I133 (/IDA) Q9I133 (/IDA) Q9I133 (/IDA) Q9I133 (/IDA) Q9I133 (/IDA) Q9I133 (/IDA) Q9I133 (/IDA) Q9I133 (/IDA) Q9I133 (/IDA) Q9I133 (/IDA)
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
9 P23747 (/IDA) P23747 (/IDA) P23747 (/IDA) P23747 (/IDA) P23747 (/IDA) P23747 (/IDA) P23747 (/IDA) Q9I2A4 (/IDA) Q9I2A4 (/IDA)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
7 C1DI41 (/IPI) C1DI41 (/IPI) C1DI41 (/IPI) O67198 (/IPI) O84957 (/IPI) P12627 (/IPI) Q1ZS18 (/IPI)
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
2 Q489D8 (/ISS) Q5LKZ2 (/ISS)

There are 59 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Phosphorelay signal transduction system GO:0000160
A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
124 Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS)
(114 more)
Regulation of nitrogen utilization GO:0006808
Any process that modulates the frequency, rate or extent of nitrogen utilization.
95 Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS) Q48CE7 (/ISS)
(85 more)
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
78 G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA)
(68 more)
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
77 P0AFU4 (/ISS) P0AFU4 (/ISS) P0AFU4 (/ISS) P0AFU4 (/ISS) P0AFU4 (/ISS) P0AFU4 (/ISS) P0AFU4 (/ISS) P0AFU4 (/ISS) P0AFU4 (/ISS) P0AFU4 (/ISS)
(67 more)
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
76 G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA) G3XCV0 (/IDA)
(66 more)
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
75 A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS)
(65 more)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
56 P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA)
(46 more)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
52 P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP)
(42 more)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
48 P07604 (/IMP) P07604 (/IMP) P07604 (/IMP) P07604 (/IMP) P07604 (/IMP) P07604 (/IMP) P07604 (/IMP) P07604 (/IMP) P07604 (/IMP) P07604 (/IMP)
(38 more)
Phosphorelay signal transduction system GO:0000160
A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
44 P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP) P0AFU4 (/IMP)
(34 more)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
40 P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS)
(30 more)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
34 P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA) P37344 (/IDA)
(24 more)
Positive regulation of cilium-dependent cell motility GO:2000155
Any process that activates or increases the frequency, rate or extent of cilium-dependent cell motility.
31 G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP)
(21 more)
Positive regulation of DNA-templated transcription, initiation GO:2000144
Any process that activates or increases the frequency, rate or extent of DNA-templated transcription initiation.
30 P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA)
(20 more)
Regulation of polyamine biosynthetic process GO:0010967
Any process that modulates the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.
29 Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA) Q06065 (/IDA)
(19 more)
Positive regulation of cell-substrate adhesion GO:0010811
Any process that increases the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.
22 G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP)
(12 more)
Negative regulation of extracellular matrix assembly GO:1901202
Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix assembly.
22 G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP)
(12 more)
Regulation of bacterial-type flagellum-dependent cell motility GO:1902021
Any process that modulates the frequency, rate or extent of bacterial-type flagellum-dependent cell motility.
22 G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP)
(12 more)
Positive regulation of secondary metabolite biosynthetic process GO:1900378
Any process that activates or increases the frequency, rate or extent of secondary metabolite biosynthetic process.
17 P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP)
(7 more)
Response to radiation GO:0009314
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
16 P77743 (/IMP) P77743 (/IMP) P77743 (/IMP) P77743 (/IMP) P77743 (/IMP) P77743 (/IMP) P77743 (/IMP) P77743 (/IMP) P77743 (/IMP) P77743 (/IMP)
(6 more)
C4-dicarboxylate transport GO:0015740
The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.
15 Q5LKZ2 (/ISS) Q8ECK1 (/ISS) Q9KN24 (/ISS) Q9KN24 (/ISS) Q9KN24 (/ISS) Q9KN24 (/ISS) Q9KN24 (/ISS) Q9KN24 (/ISS) Q9KN24 (/ISS) Q9KQS2 (/ISS)
(5 more)
Arginine catabolic process GO:0006527
The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
14 A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS) A0A1V4B7N8 (/ISS)
(4 more)
Phosphorelay signal transduction system GO:0000160
A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
13 P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA) P14375 (/IDA)
(3 more)
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
13 P14375 (/IEP) P14375 (/IEP) P14375 (/IEP) P14375 (/IEP) P14375 (/IEP) P14375 (/IEP) P14375 (/IEP) P14375 (/IEP) P14375 (/IEP) P14375 (/IEP)
(3 more)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
12 P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP)
(2 more)
Protein homotetramerization GO:0051289
The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits.
12 P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA) P19323 (/IDA)
(2 more)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
11 P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP) P37344 (/IEP)
(1 more)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
11 P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS) P37344 (/ISS)
(1 more)
Regulation of cell projection assembly GO:0060491
Any process that modulates the rate, frequency, or extent of cell projection assembly.
11 Q00934 (/IMP) Q00934 (/IMP) Q00934 (/IMP) Q00934 (/IMP) Q00934 (/IMP) Q00934 (/IMP) Q00934 (/IMP) Q00934 (/IMP) Q00934 (/IMP) Q00934 (/IMP)
(1 more)
Positive regulation of cell motility GO:2000147
Any process that activates or increases the frequency, rate or extent of cell motility.
11 G3XCK7 (/IMP) G3XCK7 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) Q9HV73 (/IMP)
(1 more)
Glycine catabolic process GO:0006546
The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.
10 Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP)
Positive regulation of organic acid transport GO:0032892
Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
10 Q9HU19 (/IMP) Q9HU19 (/IMP) Q9HU19 (/IMP) Q9HU19 (/IMP) Q9HU19 (/IMP) Q9HU19 (/IMP) Q9HU19 (/IMP) Q9HU19 (/IMP) Q9HU19 (/IMP) Q9HU19 (/IMP)
Positive regulation of cellular amino acid metabolic process GO:0045764
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid.
10 Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP) Q9I133 (/IMP)
Positive regulation of cell adhesion GO:0045785
Any process that activates or increases the frequency, rate or extent of cell adhesion.
9 Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP)
Negative regulation of single-species biofilm formation GO:1900191
Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation.
9 Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP) Q9I4N3 (/IMP)
DNA-templated transcription, initiation GO:0006352
Any process involved in the assembly of the RNA polymerase preinitiation complex (PIC) at the core promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. The initiation phase ends just before and does not include promoter clearance, or release, which is the transition between the initiation and elongation phases of transcription.
8 P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP)
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
8 P03029 (/IMP) P03029 (/IMP) P03029 (/IMP) P03029 (/IMP) P03029 (/IMP) P03029 (/IMP) P03029 (/IMP) P03029 (/IMP)
Positive regulation of single-species biofilm formation on inanimate substrate GO:1900233
Any process that activates or increases the frequency, rate or extent of single-species biofilm formation on inanimate substrate.
8 Q9HT62 (/IMP) Q9HT62 (/IMP) Q9HT62 (/IMP) Q9HT62 (/IMP) Q9HT62 (/IMP) Q9HT62 (/IMP) Q9HT62 (/IMP) Q9HT62 (/IMP)
Regulation of DNA-templated transcription, initiation GO:2000142
Any process that modulates the frequency, rate or extent of DNA-templated transcription initiation.
8 P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP) P71229 (/IMP)
Alginic acid biosynthetic process GO:0042121
The chemical reactions and pathways resulting in the formation of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).
7 P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP)
Positive regulation of proteolysis GO:0045862
Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.
7 P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP)
Negative regulation of single-species biofilm formation on inanimate substrate GO:1900232
Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate.
7 P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP) P23747 (/IMP)
Arginine metabolic process GO:0006525
The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
6 P38022 (/IDA) P38022 (/IDA) P38022 (/IDA) P38022 (/IDA) P38022 (/IDA) P38022 (/IDA)
Regulation of ornithine metabolic process GO:0090368
Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.
4 G3XCK7 (/IMP) G3XCK7 (/IMP) Q9HV73 (/IMP) Q9HV73 (/IMP)
Regulation of arginine catabolic process GO:1900081
Any process that modulates the frequency, rate or extent of arginine catabolic process.
4 G3XCK7 (/IMP) G3XCK7 (/IMP) Q9HV73 (/IMP) Q9HV73 (/IMP)
Positive regulation of proline catabolic process to glutamate GO:2001158
Any process that activates or increases the frequency, rate or extent of proline catabolic process to glutamate.
4 G3XCK7 (/IMP) G3XCK7 (/IMP) Q9HV73 (/IMP) Q9HV73 (/IMP)
Bioluminescence GO:0008218
The production of light by certain enzyme-catalyzed reactions in cells.
3 P0C5S5 (/IMP) P0C5S5 (/IMP) Q5E6B4 (/IMP)
Protein secretion by the type VI secretion system GO:0033103
The process in which proteins are transferred into the extracellular milieu or directly into host cells by the type VI secretion system. Proteins secreted by this system do not require an N-terminal signal sequence.
3 Q9I362 (/IGC) Q9I362 (/IGC) Q9I362 (/IGC)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
3 A7MVC2 (/EXP) A7MVC2 (/EXP) Q5DYQ0 (/EXP)
Fermentation GO:0006113
The anaerobic enzymatic conversion of organic compounds, especially carbohydrates, coupling the oxidation and reduction of NAD/H and the generation of adenosine triphosphate (ATP).
2 A0A0F7RB87 (/ISS) A0A0F7RB87 (/ISS)
L-phenylalanine catabolic process GO:0006559
The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid.
2 Q9I572 (/IMP) Q9I572 (/IMP)
Nitrogen fixation GO:0009399
The process in which nitrogen is taken from its relatively inert molecular form (N2) in the atmosphere and converted into nitrogen compounds useful for other chemical processes, such as ammonia, nitrate and nitrogen dioxide.
2 Q5LRP0 (/ISS) Q603F8 (/ISS)
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
2 Q1DDD5 (/IMP) Q1DDD5 (/IMP)
Nitrogen utilization GO:0019740
A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary nitrogen source, usually ammonia, and then activates genes to scavenge the last traces of the primary nitrogen source and to transport and metabolize alternative nitrogen sources. The utilization process begins when the cell or organism detects nitrogen levels, includes the activation of genes whose products detect, transport or metabolize nitrogen-containing substances, and ends when nitrogen is incorporated into the cell or organism's metabolism.
2 Q74EZ8 (/ISS) Q74EZ8 (/ISS)
Response to starvation GO:0042594
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment.
2 Q1D7F8 (/IMP) Q1D7F8 (/IMP)
Regulation of sporulation GO:0043937
Any process that modulates the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.
2 Q1D7F8 (/IMP) Q1D7F8 (/IMP)
Cellular response to nitrogen starvation GO:0006995
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen.
1 Q8EB45 (/ISS)
Acetoin catabolic process GO:0045150
The chemical reactions and pathways resulting in the breakdown of acetoin, 3-hydroxy-2-butanone.
1 Q5LLX7 (/ISS)
Positive regulation of DNA-templated transcription, initiation GO:2000144
Any process that activates or increases the frequency, rate or extent of DNA-templated transcription initiation.
1 P30667 (/IMP)

There are 4 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
118 P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA) P07604 (/IDA)
(108 more)
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
35 G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP) G3XCV0 (/IMP)
(25 more)
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
28 G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI) G3XCV0 (/IPI)
(18 more)
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
27 A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA) A0A0C7D413 (/IDA)
(17 more)