The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 78: serine/arginine-rich splicing factor 7 isoform X1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
17 |
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
(7 more) |
|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
16 |
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
(6 more) |
|
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
16 |
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
Q16629 (/IPI)
(6 more) |
|
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
1 | Q8BL97 (/ISO) |
There are 11 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
18 |
Q3T106 (/ISS)
Q3T106 (/ISS)
Q3T106 (/ISS)
Q3T106 (/ISS)
Q3T106 (/ISS)
Q3T106 (/ISS)
Q3T106 (/ISS)
Q3T106 (/ISS)
Q3T106 (/ISS)
Q3T106 (/ISS)
(8 more) |
|
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
16 |
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
(6 more) |
|
MRNA processing GO:0006397
Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
|
16 |
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
(6 more) |
|
RNA export from nucleus GO:0006405
The directed movement of RNA from the nucleus to the cytoplasm.
|
16 |
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
(6 more) |
|
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
|
16 |
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
(6 more) |
|
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
|
16 |
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
(6 more) |
|
MRNA 3'-end processing GO:0031124
Any process involved in forming the mature 3' end of an mRNA molecule.
|
16 |
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
(6 more) |
|
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
16 |
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
(6 more) |
|
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
|
1 | Q8BL97 (/ISO) |
|
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
1 | Q8BL97 (/ISO) |
|
Cellular response to leukemia inhibitory factor GO:1990830
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukemia inhibitory factor stimulus.
|
1 | Q8BL97 (/IEP) |
There are 5 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
22 |
C9JAB2 (/IDA)
C9JAB2 (/IDA)
C9JAB2 (/IDA)
C9JAB2 (/IDA)
C9JAB2 (/IDA)
C9JAB2 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
Q16629 (/IDA)
(12 more) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
16 |
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
(6 more) |
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
16 |
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
Q16629 (/TAS)
(6 more) |
|
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
16 |
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
Q16629 (/HDA)
(6 more) |
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | Q8BL97 (/ISO) |