View in Gene3D

CATH Superfamily 3.30.70.330

RRM (RNA recognition motif) domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 612: Glycine-rich RNA-binding protein 2

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 6 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Double-stranded DNA binding GO:0003690
Interacting selectively and non-covalently with double-stranded DNA.
 4 Q9LIS2 (/IDA) Q9LIS2 (/IDA) Q9SVM8 (/IDA) Q9SVM8 (/IDA)
Single-stranded DNA binding GO:0003697
Interacting selectively and non-covalently with single-stranded DNA.
 4 Q9LIS2 (/IDA) Q9LIS2 (/IDA) Q9SVM8 (/IDA) Q9SVM8 (/IDA)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
 4 Q9LIS2 (/IDA) Q9LIS2 (/IDA) Q9SVM8 (/IDA) Q9SVM8 (/IDA)
Copper ion binding GO:0005507
Interacting selectively and non-covalently with copper (Cu) ions.
 2 Q9SVM8 (/IDA) Q9SVM8 (/IDA)
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
 2 Q9SVM8 (/IDA) Q9SVM8 (/IDA)
Misfolded RNA binding GO:0034336
Interacting selectively and non-covalently with an RNA molecule that has assumed an incorrect conformation.
 2 Q9SVM8 (/IDA) Q9SVM8 (/IDA)

There are 9 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Response to osmotic stress GO:0006970
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
 4 Q9LIS2 (/IMP) Q9LIS2 (/IMP) Q9SVM8 (/IMP) Q9SVM8 (/IMP)
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
 4 Q9LIS2 (/IEP) Q9LIS2 (/IEP) Q9SVM8 (/IEP) Q9SVM8 (/IEP)
Response to water deprivation GO:0009414
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
 4 Q9LIS2 (/IEP) Q9LIS2 (/IEP) Q9SVM8 (/IEP) Q9SVM8 (/IEP)
Response to salt stress GO:0009651
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
 4 Q9LIS2 (/IMP) Q9LIS2 (/IMP) Q9SVM8 (/IMP) Q9SVM8 (/IMP)
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
 2 Q9SVM8 (/IMP) Q9SVM8 (/IMP)
Cold acclimation GO:0009631
Any process that increases freezing tolerance of an organism in response to low, nonfreezing temperatures.
 2 Q9SVM8 (/IMP) Q9SVM8 (/IMP)
Seed germination GO:0009845
The physiological and developmental changes that occur in a seed commencing with water uptake (imbibition) and terminating with the elongation of the embryonic axis.
 2 Q9SVM8 (/IMP) Q9SVM8 (/IMP)
Negative regulation of DNA-templated transcription, termination GO:0060567
Any process that decreases the rate, frequency or extent of DNA-dependent transcription termination, the process in which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.
 2 Q9SVM8 (/IDA) Q9SVM8 (/IDA)
Mitochondrial RNA modification GO:1900864
Any RNA modification that takes place in mitochondrion.
 2 Q9LIS2 (/IGI) Q9LIS2 (/IGI)

There are 1 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
 4 Q9LIS2 (/IDA) Q9LIS2 (/IDA) Q9SVM8 (/IDA) Q9SVM8 (/IDA)