The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 108: Heterogeneous nuclear ribonucleoproteins A2/B1

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 30 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
46 A7VJC2 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(36 more)
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
46 A7VJC2 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(36 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
46 A7VJC2 (/IPI) P22626 (/IPI) P22626 (/IPI) P22626 (/IPI) P22626 (/IPI) P22626 (/IPI) P22626 (/IPI) P22626 (/IPI) P22626 (/IPI) P22626 (/IPI)
(36 more)
Single-stranded telomeric DNA binding GO:0043047
Interacting selectively and non-covalently with single-stranded telomere-associated DNA.
46 A7VJC2 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(36 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
45 P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA)
(35 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
45 P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS)
(35 more)
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
G-rich strand telomeric DNA binding GO:0098505
Interacting selectively and non-covalently with G-rich, single-stranded, telomere-associated DNA.
45 P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS)
(35 more)
N6-methyladenosine-containing RNA binding GO:1990247
Interacting selectively and non-covalently with an RNA molecule modified by N6-methyladenosine (m6A), a modification present at internal sites of mRNAs and some non-coding RNAs.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
41 A7VJC2 (/ISS) O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(31 more)
N6-methyladenosine-containing RNA binding GO:1990247
Interacting selectively and non-covalently with an RNA molecule modified by N6-methyladenosine (m6A), a modification present at internal sites of mRNAs and some non-coding RNAs.
41 A7VJC2 (/ISS) O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(31 more)
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
40 O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(30 more)
Single-stranded telomeric DNA binding GO:0043047
Interacting selectively and non-covalently with single-stranded telomere-associated DNA.
40 O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(30 more)
Regulatory region RNA binding GO:0001069
Interacting selectively and non-covalently with a RNA region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.
2 O88569 (/ISO) O88569 (/ISO)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
2 O88569 (/IPI) O88569 (/IPI)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
2 O88569 (/ISO) O88569 (/ISO)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
2 O88569 (/ISS) O88569 (/ISS)
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
2 O88569 (/ISO) O88569 (/ISO)
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
2 O88569 (/ISO) O88569 (/ISO)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
2 O88569 (/ISO) O88569 (/ISO)
Single-stranded telomeric DNA binding GO:0043047
Interacting selectively and non-covalently with single-stranded telomere-associated DNA.
2 O88569 (/ISO) O88569 (/ISO)
DNA polymerase binding GO:0070182
Interacting selectively and non-covalently with a DNA polymerase.
2 O88569 (/ISO) O88569 (/ISO)
Pre-mRNA intronic binding GO:0097157
Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA).
2 O88569 (/IDA) O88569 (/IDA)
G-rich strand telomeric DNA binding GO:0098505
Interacting selectively and non-covalently with G-rich, single-stranded, telomere-associated DNA.
2 O88569 (/ISO) O88569 (/ISO)
N6-methyladenosine-containing RNA binding GO:1990247
Interacting selectively and non-covalently with an RNA molecule modified by N6-methyladenosine (m6A), a modification present at internal sites of mRNAs and some non-coding RNAs.
2 O88569 (/ISO) O88569 (/ISO)
MRNA CDS binding GO:1990715
Interacting selectively and non-covalently with the coding sequence (CDS) of an mRNA molecule.
2 O88569 (/ISO) O88569 (/ISO)
Regulatory region RNA binding GO:0001069
Interacting selectively and non-covalently with a RNA region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.
1 A7VJC2 (/IDA)
DNA polymerase binding GO:0070182
Interacting selectively and non-covalently with a DNA polymerase.
1 A7VJC2 (/IPI)
G-rich strand telomeric DNA binding GO:0098505
Interacting selectively and non-covalently with G-rich, single-stranded, telomere-associated DNA.
1 A7VJC2 (/IDA)
MRNA CDS binding GO:1990715
Interacting selectively and non-covalently with the coding sequence (CDS) of an mRNA molecule.
1 A7VJC2 (/IDA)

There are 41 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
46 A7VJC2 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(36 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
45 P22626 (/IC) P22626 (/IC) P22626 (/IC) P22626 (/IC) P22626 (/IC) P22626 (/IC) P22626 (/IC) P22626 (/IC) P22626 (/IC) P22626 (/IC)
(35 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
45 P22626 (/IMP) P22626 (/IMP) P22626 (/IMP) P22626 (/IMP) P22626 (/IMP) P22626 (/IMP) P22626 (/IMP) P22626 (/IMP) P22626 (/IMP) P22626 (/IMP)
(35 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
45 P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS)
(35 more)
MRNA processing GO:0006397
Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
RNA metabolic process GO:0016070
The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
45 P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS)
(35 more)
Primary miRNA processing GO:0031053
Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
Interleukin-12-mediated signaling pathway GO:0035722
A series of molecular signals initiated by the binding of interleukin-12 to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription.
45 P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS)
(35 more)
G-quadruplex DNA unwinding GO:0044806
The process by which G-quadruplex (also known as G4) DNA, which is a four-stranded DNA structure held together by guanine base pairing, is unwound or 'melted'.
45 P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS)
(35 more)
RNA transport GO:0050658
The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
Positive regulation of telomere maintenance via telomere lengthening GO:1904358
Any process that activates or increases the frequency, rate or extent of telomere maintenance via telomere lengthening.
45 P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS)
(35 more)
Positive regulation of telomerase RNA reverse transcriptase activity GO:1905663
Any process that activates or increases the frequency, rate or extent of telomerase RNA reverse transcriptase activity.
45 P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS)
(35 more)
MiRNA transport GO:1990428
The directed movement of microRNA (miRNA) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
41 A7VJC2 (/ISS) O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(31 more)
Primary miRNA processing GO:0031053
Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.
41 A7VJC2 (/ISS) O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(31 more)
MiRNA transport GO:1990428
The directed movement of microRNA (miRNA) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
41 A7VJC2 (/ISS) O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(31 more)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
40 O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(30 more)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
2 O88569 (/IGI) O88569 (/IGI)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
2 O88569 (/ISO) O88569 (/ISO)
MRNA processing GO:0006397
Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
2 O88569 (/ISO) O88569 (/ISO)
MRNA processing GO:0006397
Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
2 O88569 (/ISS) O88569 (/ISS)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
2 O88569 (/ISO) O88569 (/ISO)
Telomere capping GO:0016233
A process in which telomeres are protected from degradation and fusion, thereby ensuring chromosome stability by protecting the ends from both degradation and from being recognized as damaged DNA. May be mediated by specific single- or double-stranded telomeric DNA binding proteins.
2 O88569 (/ISO) O88569 (/ISO)
Primary miRNA processing GO:0031053
Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.
2 O88569 (/ISO) O88569 (/ISO)
G-quadruplex DNA unwinding GO:0044806
The process by which G-quadruplex (also known as G4) DNA, which is a four-stranded DNA structure held together by guanine base pairing, is unwound or 'melted'.
2 O88569 (/ISO) O88569 (/ISO)
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
2 O88569 (/IDA) O88569 (/IDA)
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
2 O88569 (/IMP) O88569 (/IMP)
RNA transport GO:0050658
The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
2 O88569 (/ISO) O88569 (/ISO)
RNA transport GO:0050658
The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
2 O88569 (/ISS) O88569 (/ISS)
Positive regulation of telomere maintenance via telomere lengthening GO:1904358
Any process that activates or increases the frequency, rate or extent of telomere maintenance via telomere lengthening.
2 O88569 (/ISO) O88569 (/ISO)
Positive regulation of telomerase RNA reverse transcriptase activity GO:1905663
Any process that activates or increases the frequency, rate or extent of telomerase RNA reverse transcriptase activity.
2 O88569 (/ISO) O88569 (/ISO)
MiRNA transport GO:1990428
The directed movement of microRNA (miRNA) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
2 O88569 (/ISO) O88569 (/ISO)
Male gonad development GO:0008584
The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure.
1 A7VJC2 (/IEP)
Telomere capping GO:0016233
A process in which telomeres are protected from degradation and fusion, thereby ensuring chromosome stability by protecting the ends from both degradation and from being recognized as damaged DNA. May be mediated by specific single- or double-stranded telomeric DNA binding proteins.
1 A7VJC2 (/IDA)
Lung development GO:0030324
The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.
1 A7VJC2 (/IEP)
G-quadruplex DNA unwinding GO:0044806
The process by which G-quadruplex (also known as G4) DNA, which is a four-stranded DNA structure held together by guanine base pairing, is unwound or 'melted'.
1 A7VJC2 (/IDA)
Oligodendrocyte differentiation GO:0048709
The process in which a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system.
1 A7VJC2 (/IEP)
RNA transport GO:0050658
The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
1 A7VJC2 (/IMP)
Response to mineralocorticoid GO:0051385
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mineralocorticoid stimulus. Mineralocorticoids are hormonal C21 corticosteroids synthesized from cholesterol and characterized by their similarity to aldosterone. Mineralocorticoids act primarily on water and electrolyte balance.
1 A7VJC2 (/IEP)
Positive regulation of telomere maintenance via telomere lengthening GO:1904358
Any process that activates or increases the frequency, rate or extent of telomere maintenance via telomere lengthening.
1 A7VJC2 (/IDA)
Positive regulation of telomerase RNA reverse transcriptase activity GO:1905663
Any process that activates or increases the frequency, rate or extent of telomerase RNA reverse transcriptase activity.
1 A7VJC2 (/IDA)

There are 45 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
51 A0A087WUI2 (/IDA) A0A087WUI2 (/IDA) A0A087WUI2 (/IDA) A0A087WUI2 (/IDA) A0A087WUI2 (/IDA) A0A087WUI2 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(41 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
48 A7VJC2 (/IDA) O88569 (/IDA) O88569 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(38 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
46 A7VJC2 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(36 more)
Chromosome, telomeric region GO:0000781
The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins.
45 P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS)
(35 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
45 P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS)
(35 more)
Spliceosomal complex GO:0005681
Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
Cajal body GO:0015030
A class of nuclear body, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA.
45 P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS)
(35 more)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
45 P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA) P22626 (/HDA)
(35 more)
Nuclear matrix GO:0016363
The dense fibrillar network lying on the inner side of the nuclear membrane.
45 P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS) P22626 (/ISS)
(35 more)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
45 P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS) P22626 (/TAS)
(35 more)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
45 P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA) P22626 (/IDA)
(35 more)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
41 A7VJC2 (/ISS) O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(31 more)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
41 A7VJC2 (/ISS) O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(31 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
40 O88569 (/ISS) O88569 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(30 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
38 Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS) Q2HJ60 (/ISS)
(28 more)
Chromosome, telomeric region GO:0000781
The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins.
2 O88569 (/ISO) O88569 (/ISO)
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
2 O88569 (/ISO) O88569 (/ISO)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
2 O88569 (/ISO) O88569 (/ISO)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
2 O88569 (/ISO) O88569 (/ISO)
Spliceosomal complex GO:0005681
Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
2 O88569 (/ISO) O88569 (/ISO)
Spliceosomal complex GO:0005681
Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
2 O88569 (/ISS) O88569 (/ISS)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
2 O88569 (/ISO) O88569 (/ISO)
Cajal body GO:0015030
A class of nuclear body, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA.
2 O88569 (/ISO) O88569 (/ISO)
Nuclear matrix GO:0016363
The dense fibrillar network lying on the inner side of the nuclear membrane.
2 O88569 (/ISO) O88569 (/ISO)
Neuron projection GO:0043005
A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
2 O88569 (/ISO) O88569 (/ISO)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
2 O88569 (/ISO) O88569 (/ISO)
Perikaryon GO:0043204
The portion of the cell soma (neuronal cell body) that excludes the nucleus.
2 O88569 (/ISO) O88569 (/ISO)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
2 O88569 (/ISO) O88569 (/ISO)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
2 O88569 (/ISO) O88569 (/ISO)
Neuronal ribonucleoprotein granule GO:0071598
A ribonucleoprotein complex that is found in the cytoplasm of axons and dendrites, and transports translationally silenced mRNAs to dendritic synapses, where they are released and translated in response to specific exogenous stimuli.
2 O88569 (/ISO) O88569 (/ISO)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
2 O88569 (/ISO) O88569 (/ISO)
Postsynaptic cytosol GO:0099524
The region of the cytosol consisting of all cytosol that is part of the postsynapse.
2 O88569 (/ISO) O88569 (/ISO)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
2 O88569 (/ISO) O88569 (/ISO)
Chromosome, telomeric region GO:0000781
The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins.
1 A7VJC2 (/IDA)
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
1 A7VJC2 (/IDA)
Cajal body GO:0015030
A class of nuclear body, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA.
1 A7VJC2 (/IDA)
Nuclear matrix GO:0016363
The dense fibrillar network lying on the inner side of the nuclear membrane.
1 A7VJC2 (/IDA)
Neuron projection GO:0043005
A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
1 A7VJC2 (/IDA)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
1 A7VJC2 (/IDA)
Perikaryon GO:0043204
The portion of the cell soma (neuronal cell body) that excludes the nucleus.
1 A7VJC2 (/IDA)
Neuronal ribonucleoprotein granule GO:0071598
A ribonucleoprotein complex that is found in the cytoplasm of axons and dendrites, and transports translationally silenced mRNAs to dendritic synapses, where they are released and translated in response to specific exogenous stimuli.
1 A7VJC2 (/IDA)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
1 A7VJC2 (/IDA)
Postsynaptic cytosol GO:0099524
The region of the cytosol consisting of all cytosol that is part of the postsynapse.
1 A7VJC2 (/IDA)