The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 191: Retrograde regulation protein 2
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 2 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
5 | P32608 (/IPI) P32608 (/IPI) P32608 (/IPI) P32608 (/IPI) P32608 (/IPI) |
|
Phosphoprotein binding GO:0051219
Interacting selectively and non-covalently with a phosphorylated protein.
|
5 | P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) |
There are 10 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nitrogen catabolite regulation of transcription from RNA polymerase II promoter GO:0001079
A transcription regulation process in which the presence of one nitrogen source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other nitrogen sources.
|
5 | P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) |
|
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
5 | P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) |
|
Protein import into nucleus GO:0006606
The directed movement of a protein from the cytoplasm to the nucleus.
|
5 | P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) |
|
Mitochondria-nucleus signaling pathway GO:0031930
A series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.
|
5 | P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) |
|
Protein localization to nucleus GO:0034504
A process in which a protein transports or maintains the localization of another protein to the nucleus.
|
5 | P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) |
|
Maintenance of DNA trinucleotide repeats GO:0035753
Any process involved in sustaining the fidelity and copy number of DNA trinucleotide repeats. DNA trinucleotide repeats are naturally occurring runs of three base-pairs.
|
5 | P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) |
|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
5 | P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) |
|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
5 | P32608 (/IGI) P32608 (/IGI) P32608 (/IGI) P32608 (/IGI) P32608 (/IGI) |
|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
5 | P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) |
|
Negative regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging GO:1900008
Any process that stops, prevents or reduces the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.
|
5 | P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) P32608 (/IMP) |
There are 3 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
5 | P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) |
|
Transcriptionally active chromatin GO:0035327
The ordered and organized complex of DNA and protein that forms regions of the chromosome that are being actively transcribed.
|
5 | P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) |
|
SLIK (SAGA-like) complex GO:0046695
A SAGA-type histone acetyltransferase complex that contains Rtg2 and a smaller form of Spt7 than the fungal SAGA complex, and lacks Spt8. The complex is involved in the yeast retrograde response pathway, which is important for gene expression changes during mitochondrial dysfunction.
|
5 | P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) P32608 (/IDA) |