The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Integrase, DNA-binding domain
".
FunFam 1: Phage integrase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 5 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Prophage integrase activity GO:0008979
Catalysis of the integration of prophage DNA into a target DNA molecule, usually a bacterial chromosome, via a sequence-specific recombination event which involves the formation of an intasome, a DNA-protein-complex designed for site-specific recombination of the phage and host DNA.
|
18 |
Q57497 (/ISS)
Q57497 (/ISS)
Q57497 (/ISS)
Q57497 (/ISS)
Q57497 (/ISS)
Q57497 (/ISS)
Q9KR84 (/ISS)
Q9KR84 (/ISS)
Q9KR84 (/ISS)
Q9KR84 (/ISS)
(8 more) |
|
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
9 | P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) |
|
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
9 | P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) P37326 (/IDA) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
2 | P32053 (/IPI) P32053 (/IPI) |
|
Prophage integrase activity GO:0008979
Catalysis of the integration of prophage DNA into a target DNA molecule, usually a bacterial chromosome, via a sequence-specific recombination event which involves the formation of an intasome, a DNA-protein-complex designed for site-specific recombination of the phage and host DNA.
|
2 | P32053 (/IMP) P32053 (/IMP) |
There are 2 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Establishment of integrated proviral latency GO:0075713
A process by which the virus integrates into the host genome and establishes as a stable provirus or prophage.
|
18 |
Q57497 (/ISS)
Q57497 (/ISS)
Q57497 (/ISS)
Q57497 (/ISS)
Q57497 (/ISS)
Q57497 (/ISS)
Q9KR84 (/ISS)
Q9KR84 (/ISS)
Q9KR84 (/ISS)
Q9KR84 (/ISS)
(8 more) |
|
Provirus excision GO:0032359
The molecular events that lead to the excision of a viral genome from the host genome.
|
11 |
P32053 (/IMP)
P32053 (/IMP)
P37326 (/IMP)
P37326 (/IMP)
P37326 (/IMP)
P37326 (/IMP)
P37326 (/IMP)
P37326 (/IMP)
P37326 (/IMP)
P37326 (/IMP)
(1 more) |
There are 0 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.