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CATH Superfamily 2.30.30.100

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 128: U6 snRNA-associated Sm-like protein LSm3p

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 1 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
U6 snRNA binding GO:0017070
Interacting selectively and non-covalently with the U6 small nuclear RNA (U6 snRNA).
 4 Q57TX5 (/IMP) Q57TX5 (/IMP) Q57TX5 (/IMP) Q57TX5 (/IMP)

There are 3 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Regulation of RNA stability GO:0043487
Any process that modulates the propensity of RNA molecules to degradation. Includes processes that both stabilize and destabilize RNAs.
 4 Q57TX5 (/IMP) Q57TX5 (/IMP) Q57TX5 (/IMP) Q57TX5 (/IMP)
MRNA trans splicing, SL addition GO:0045291
The joining together of two independently transcribed RNAs, where the one that provides the 5' portion of the final mRNA is from a splice leader RNA (SL-RNA). The SL-RNA, or mini-exon donor sequence, is added to the 5'-end of the acceptor RNA molecule which provides the mRNA body.
 4 Q57TX5 (/IMP) Q57TX5 (/IMP) Q57TX5 (/IMP) Q57TX5 (/IMP)
MRNA cis splicing, via spliceosome GO:0045292
The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.
 4 Q57TX5 (/IMP) Q57TX5 (/IMP) Q57TX5 (/IMP) Q57TX5 (/IMP)

There are 2 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
 4 Q57TX5 (/ISM) Q57TX5 (/ISM) Q57TX5 (/ISM) Q57TX5 (/ISM)
U6 snRNP GO:0005688
A ribonucleoprotein complex that contains small nuclear RNA U6.
 4 Q57TX5 (/ISO) Q57TX5 (/ISO) Q57TX5 (/ISO) Q57TX5 (/ISO)