The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
YVTN repeat-like/Quinoprotein amine dehydrogenase
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 339: WD-repeat protein pop3

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
10 O74184 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI)
Protein kinase activator activity GO:0030295
Binds to and increases the activity of a protein kinase, an enzyme which phosphorylates a protein.
9 P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP)
Protein kinase activator activity GO:0030295
Binds to and increases the activity of a protein kinase, an enzyme which phosphorylates a protein.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)

There are 13 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Regulation of cell growth GO:0001558
Any process that modulates the frequency, rate, extent or direction of cell growth.
9 P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI)
Signal transduction GO:0007165
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
9 P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP)
Establishment or maintenance of actin cytoskeleton polarity GO:0030950
Any cellular process that results in the specification, formation or maintenance of polarized actin-based cytoskeletal structures.
9 P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP)
Fungal-type cell wall organization GO:0031505
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.
9 P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP)
TOR signaling GO:0031929
A series of molecular signals mediated by TOR (Target of rapamycin) proteins, members of the phosphoinositide (PI) 3-kinase related kinase (PIKK) family that act as serine/threonine kinases in response to nutrient availability or growth factors.
9 P41318 (/IC) P41318 (/IC) P41318 (/IC) P41318 (/IC) P41318 (/IC) P41318 (/IC) P41318 (/IC) P41318 (/IC) P41318 (/IC)
TOR signaling GO:0031929
A series of molecular signals mediated by TOR (Target of rapamycin) proteins, members of the phosphoinositide (PI) 3-kinase related kinase (PIKK) family that act as serine/threonine kinases in response to nutrient availability or growth factors.
9 P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP)
Mitochondria-nucleus signaling pathway GO:0031930
A series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.
9 P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP) P41318 (/IMP)
Regulation of cell growth GO:0001558
Any process that modulates the frequency, rate, extent or direction of cell growth.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
Signal transduction GO:0007165
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
Establishment or maintenance of actin cytoskeleton polarity GO:0030950
Any cellular process that results in the specification, formation or maintenance of polarized actin-based cytoskeletal structures.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
Fungal-type cell wall organization GO:0031505
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
Mitochondria-nucleus signaling pathway GO:0031930
A series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
TORC2 signaling GO:0038203
A series of intracellular molecular signals mediated by TORC2; TOR (rapamycin-insensitive companion of TOR) in complex with at least Rictor (regulatory-associated protein of TOR), or orthologs of, and other signaling components.
1 O74184 (/EXP)

There are 15 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
10 O74184 (/HDA) P41318 (/HDA) P41318 (/HDA) P41318 (/HDA) P41318 (/HDA) P41318 (/HDA) P41318 (/HDA) P41318 (/HDA) P41318 (/HDA) P41318 (/HDA)
TORC1 complex GO:0031931
A protein complex that contains at least TOR (target of rapamycin) and Raptor (regulatory-associated protein of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of S6K. In Saccharomyces, the complex contains Kog1p, Lst8p, Tco89p, and either Tor1p or Tor2p.
10 O74184 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI)
TORC2 complex GO:0031932
A protein complex that contains at least TOR (target of rapamycin) and Rictor (rapamycin-insensitive companion of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of PKB (also called AKT). In Saccharomyces, the complex contains Avo1p, Avo2p, Tsc11p, Lst8p, Bit61p, Slm1p, Slm2p, and Tor2p.
10 O74184 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI) P41318 (/IPI)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
9 P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA)
Endosome membrane GO:0010008
The lipid bilayer surrounding an endosome.
9 P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA)
Extrinsic component of cytoplasmic side of plasma membrane GO:0031234
The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.
9 P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA)
Nuclear periphery GO:0034399
The portion of the nuclear lumen proximal to the inner nuclear membrane.
9 P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA) P41318 (/IDA)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
Endosome membrane GO:0010008
The lipid bilayer surrounding an endosome.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
Extrinsic component of cytoplasmic side of plasma membrane GO:0031234
The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
TORC1 complex GO:0031931
A protein complex that contains at least TOR (target of rapamycin) and Raptor (regulatory-associated protein of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of S6K. In Saccharomyces, the complex contains Kog1p, Lst8p, Tco89p, and either Tor1p or Tor2p.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
TORC2 complex GO:0031932
A protein complex that contains at least TOR (target of rapamycin) and Rictor (rapamycin-insensitive companion of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of PKB (also called AKT). In Saccharomyces, the complex contains Avo1p, Avo2p, Tsc11p, Lst8p, Bit61p, Slm1p, Slm2p, and Tor2p.
3 G4MUL1 (/ISS) G4MUL1 (/ISS) G4MUL1 (/ISS)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 O74184 (/HDA)
TORC1 complex GO:0031931
A protein complex that contains at least TOR (target of rapamycin) and Raptor (regulatory-associated protein of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of S6K. In Saccharomyces, the complex contains Kog1p, Lst8p, Tco89p, and either Tor1p or Tor2p.
1 O74184 (/IDA)
TORC2 complex GO:0031932
A protein complex that contains at least TOR (target of rapamycin) and Rictor (rapamycin-insensitive companion of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of PKB (also called AKT). In Saccharomyces, the complex contains Avo1p, Avo2p, Tsc11p, Lst8p, Bit61p, Slm1p, Slm2p, and Tor2p.
1 O74184 (/IDA)