The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"YVTN repeat-like/Quinoprotein amine dehydrogenase
".
FunFam 301: WD40 repeat-containing protein SMU1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 1 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
60 |
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
Q2TAY7 (/IPI)
(50 more) |
There are 5 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
181 |
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
(171 more) |
|
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
181 |
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
(171 more) |
|
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
60 |
Q76B40 (/IMP)
Q76B40 (/IMP)
Q76B40 (/IMP)
Q76B40 (/IMP)
Q76B40 (/IMP)
Q76B40 (/IMP)
Q76B40 (/IMP)
Q76B40 (/IMP)
Q76B40 (/IMP)
Q76B40 (/IMP)
(50 more) |
|
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
60 |
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
(50 more) |
|
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
60 |
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
(50 more) |
There are 8 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
181 |
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
Q2TAY7 (/ISS)
(171 more) |
|
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
|
181 |
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
(171 more) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
121 |
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
Q2TBS9 (/ISS)
(111 more) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
60 |
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
(50 more) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
60 |
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
(50 more) |
|
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
60 |
Q76B40 (/IDA)
Q76B40 (/IDA)
Q76B40 (/IDA)
Q76B40 (/IDA)
Q76B40 (/IDA)
Q76B40 (/IDA)
Q76B40 (/IDA)
Q76B40 (/IDA)
Q76B40 (/IDA)
Q76B40 (/IDA)
(50 more) |
|
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
|
60 |
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
Q2TAY7 (/IDA)
(50 more) |
|
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
|
60 |
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
Q3UKJ7 (/ISO)
(50 more) |