The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"YVTN repeat-like/Quinoprotein amine dehydrogenase
".
FunFam 190: Nuclear pore complex subunit
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 1 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
8 | P40066 (/IPI) P40066 (/IPI) P40066 (/IPI) P40066 (/IPI) P40066 (/IPI) P40066 (/IPI) P40066 (/IPI) P41838 (/IPI) |
There are 8 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Poly(A)+ mRNA export from nucleus GO:0016973
The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm.
|
8 | P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P41838 (/IMP) |
|
Transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery GO:0000972
The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery. In S. cerevisiae, this process involves cis-acting DNA sequences such as the TATA box and upstream activating sequence (UAS) elements, trans-acting transcriptional activators, and also the 3'-UTR of the transcript.
|
7 | P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) |
|
Posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery GO:0000973
The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery even after transcription has been repressed.
|
7 | P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) |
|
Nuclear pore distribution GO:0031081
Any process that establishes the spatial arrangement of nuclear pores within the nuclear envelope.
|
7 | P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) |
|
Regulation of mRNA export from nucleus in response to heat stress GO:2000728
Any process that modulates the frequency, rate or extent of mRNA export from nucleus in response to heat stress.
|
7 | P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) P40066 (/IMP) |
|
Ribosomal subunit export from nucleus GO:0000054
The directed movement of a ribosomal subunit from the nucleus into the cytoplasm.
|
1 | P41838 (/ISO) |
|
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
|
1 | P41838 (/IGI) |
|
Poly(A)+ mRNA export from nucleus GO:0016973
The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm.
|
1 | Q54QH0 (/ISS) |
There are 7 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nuclear pore GO:0005643
Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
|
8 | P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P41838 (/IDA) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
7 | P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) P40066 (/IDA) |
|
Nuclear periphery GO:0034399
The portion of the nuclear lumen proximal to the inner nuclear membrane.
|
4 | G5EAY9 (/IDA) G5EAY9 (/IDA) G5EAY9 (/IDA) P41838 (/IDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q54QH0 (/ISS) |
|
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
|
1 | P41838 (/HDA) |
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | P41838 (/IDA) |
|
Phagocytic vesicle GO:0045335
A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
|
1 | Q54QH0 (/HDA) |