CATH Superfamily 1.20.58.860
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 4: Ubiquitin carboxyl-terminal hydrolase calypso
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 7 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
13 |
B3MIV9 (/ISS)
B3NPV7 (/ISS)
B4GAM2 (/ISS)
B4GAM2 (/ISS)
B4HST0 (/ISS)
B4JW98 (/ISS)
B4KT51 (/ISS)
B4LQ24 (/ISS)
B4P6P6 (/ISS)
B4QHH0 (/ISS)
(3 more) |
|
Thiol-dependent ubiquitin-specific protease activity GO:0004843
Catalysis of the thiol-dependent hydrolysis of a peptide bond formed by the C-terminal glycine of ubiquitin and another protein.
|
13 |
B3MIV9 (/ISS)
B3NPV7 (/ISS)
B4GAM2 (/ISS)
B4GAM2 (/ISS)
B4HST0 (/ISS)
B4JW98 (/ISS)
B4KT51 (/ISS)
B4LQ24 (/ISS)
B4P6P6 (/ISS)
B4QHH0 (/ISS)
(3 more) |
|
Thiol-dependent ubiquitinyl hydrolase activity GO:0036459
Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin.
|
13 |
B3MIV9 (/ISS)
B3NPV7 (/ISS)
B4GAM2 (/ISS)
B4GAM2 (/ISS)
B4HST0 (/ISS)
B4JW98 (/ISS)
B4KT51 (/ISS)
B4LQ24 (/ISS)
B4P6P6 (/ISS)
B4QHH0 (/ISS)
(3 more) |
|
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
1 | Q7K5N4 (/IDA) |
|
Thiol-dependent ubiquitin-specific protease activity GO:0004843
Catalysis of the thiol-dependent hydrolysis of a peptide bond formed by the C-terminal glycine of ubiquitin and another protein.
|
1 | Q7K5N4 (/IDA) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
1 | Q7K5N4 (/IPI) |
|
Thiol-dependent ubiquitinyl hydrolase activity GO:0036459
Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin.
|
1 | Q7K5N4 (/IMP) |
There are 5 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Chromatin silencing GO:0006342
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
|
13 |
B3MIV9 (/ISS)
B3NPV7 (/ISS)
B4GAM2 (/ISS)
B4GAM2 (/ISS)
B4HST0 (/ISS)
B4JW98 (/ISS)
B4KT51 (/ISS)
B4LQ24 (/ISS)
B4P6P6 (/ISS)
B4QHH0 (/ISS)
(3 more) |
|
Monoubiquitinated histone H2A deubiquitination GO:0035522
The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.
|
13 |
B3MIV9 (/ISS)
B3NPV7 (/ISS)
B4GAM2 (/ISS)
B4GAM2 (/ISS)
B4HST0 (/ISS)
B4JW98 (/ISS)
B4KT51 (/ISS)
B4LQ24 (/ISS)
B4P6P6 (/ISS)
B4QHH0 (/ISS)
(3 more) |
|
Chromatin silencing GO:0006342
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
|
1 | Q7K5N4 (/IMP) |
|
Specification of segmental identity, abdomen GO:0007385
The specification of the characteristic structures of the abdominal segments following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.
|
1 | Q7K5N4 (/IMP) |
|
Monoubiquitinated histone H2A deubiquitination GO:0035522
The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.
|
1 | Q7K5N4 (/IDA) |
There are 6 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
13 |
B3MIV9 (/ISS)
B3NPV7 (/ISS)
B4GAM2 (/ISS)
B4GAM2 (/ISS)
B4HST0 (/ISS)
B4JW98 (/ISS)
B4KT51 (/ISS)
B4LQ24 (/ISS)
B4P6P6 (/ISS)
B4QHH0 (/ISS)
(3 more) |
|
PR-DUB complex GO:0035517
A multimeric protein complex that removes monoubiquitin from histone H2A. In Drosophila and mammals, the core of the complex is composed of Calypso/BAP1 and Asx/ASXL1, respectively.
|
13 |
B3MIV9 (/ISS)
B3NPV7 (/ISS)
B4GAM2 (/ISS)
B4GAM2 (/ISS)
B4HST0 (/ISS)
B4JW98 (/ISS)
B4KT51 (/ISS)
B4LQ24 (/ISS)
B4P6P6 (/ISS)
B4QHH0 (/ISS)
(3 more) |
|
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
1 | Q7K5N4 (/IDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q7K5N4 (/IDA) |
|
PR-DUB complex GO:0035517
A multimeric protein complex that removes monoubiquitin from histone H2A. In Drosophila and mammals, the core of the complex is composed of Calypso/BAP1 and Asx/ASXL1, respectively.
|
1 | Q7K5N4 (/IDA) |
|
PR-DUB complex GO:0035517
A multimeric protein complex that removes monoubiquitin from histone H2A. In Drosophila and mammals, the core of the complex is composed of Calypso/BAP1 and Asx/ASXL1, respectively.
|
1 | Q7K5N4 (/IPI) |