The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 4: Voltage-dependent calcium channel gamma-4 subunit

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 9 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Calcium channel regulator activity GO:0005246
Modulates the activity of a calcium channel.
5 Q8VHW5 (/ISS) Q8VHW9 (/ISS) Q8WXS5 (/ISS) Q9JJV4 (/ISS) Q9JJV4 (/ISS)
Calcium channel regulator activity GO:0005246
Modulates the activity of a calcium channel.
4 Q8VHW2 (/IDA) Q9UBN1 (/IDA) Q9UBN1 (/IDA) Q9UBN1 (/IDA)
Ionotropic glutamate receptor binding GO:0035255
Interacting selectively and non-covalently with an ionotropic glutamate receptor. Ionotropic glutamate receptors bind glutamate and exert an effect through the regulation of ion channels.
3 Q8VHW2 (/ISO) Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Calcium channel regulator activity GO:0005246
Modulates the activity of a calcium channel.
2 Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Ionotropic glutamate receptor binding GO:0035255
Interacting selectively and non-covalently with an ionotropic glutamate receptor. Ionotropic glutamate receptors bind glutamate and exert an effect through the regulation of ion channels.
2 Q8VHW5 (/IDA) Q8VHW9 (/IDA)
Voltage-gated calcium channel activity GO:0005245
Enables the transmembrane transfer of a calcium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
1 Q8WXS5 (/NAS)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
1 Q8VHW5 (/IPI)
Protein phosphatase 2B binding GO:0030346
Interacting selectively and non-covalently with the enzyme protein phosphatase 2B.
1 Q8VHW5 (/IPI)
Protein phosphatase 2B binding GO:0030346
Interacting selectively and non-covalently with the enzyme protein phosphatase 2B.
1 Q8VHW2 (/ISO)

There are 14 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Regulation of AMPA receptor activity GO:2000311
Any process that modulates the frequency, rate or extent of AMPA selective glutamate receptor activity.
7 Q8VHW2 (/IDA) Q8VHW5 (/IDA) Q8VHW9 (/IDA) Q8WXS5 (/IDA) Q9UBN1 (/IDA) Q9UBN1 (/IDA) Q9UBN1 (/IDA)
Cardiac conduction GO:0061337
Transfer of an organized electrical impulse across the heart to coordinate the contraction of cardiac muscles. The process begins with generation of an action potential (in the sinoatrial node (SA) in humans) and ends with a change in the rate, frequency, or extent of the contraction of the heart muscles.
4 Q8WXS5 (/TAS) Q9UBN1 (/TAS) Q9UBN1 (/TAS) Q9UBN1 (/TAS)
Membrane depolarization GO:0051899
The process in which membrane potential decreases with respect to its steady-state potential, usually from negative potential to a more positive potential. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative steady-state resting potential towards the positive membrane potential that will be the peak of the action potential.
3 Q9UBN1 (/TAS) Q9UBN1 (/TAS) Q9UBN1 (/TAS)
Regulation of AMPA receptor activity GO:2000311
Any process that modulates the frequency, rate or extent of AMPA selective glutamate receptor activity.
3 Q8VHW2 (/ISO) Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Positive regulation of AMPA receptor activity GO:2000969
Any process that activates or increases the frequency, rate or extent of AMPA selective glutamate receptor activity.
3 Q8VHW2 (/ISO) Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Transmission of nerve impulse GO:0019226
The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission.
2 Q9JJV4 (/IGI) Q9JJV4 (/IGI)
Response to cocaine GO:0042220
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.
2 Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Regulation of postsynaptic neurotransmitter receptor activity GO:0098962
Any process that modulates the frequency, rate or extent of neurotransmitter receptor activity involved in synaptic transmission. Modulation may be via an effect on ligand affinity, or effector funtion such as ion selectivity or pore opening/closing in ionotropic receptors.
2 Q9JJV4 (/IDA) Q9JJV4 (/IDA)
Regulation of postsynaptic neurotransmitter receptor activity GO:0098962
Any process that modulates the frequency, rate or extent of neurotransmitter receptor activity involved in synaptic transmission. Modulation may be via an effect on ligand affinity, or effector funtion such as ion selectivity or pore opening/closing in ionotropic receptors.
2 Q9JJV4 (/IMP) Q9JJV4 (/IMP)
Regulation of AMPA receptor activity GO:2000311
Any process that modulates the frequency, rate or extent of AMPA selective glutamate receptor activity.
2 Q9JJV4 (/IMP) Q9JJV4 (/IMP)
Positive regulation of AMPA receptor activity GO:2000969
Any process that activates or increases the frequency, rate or extent of AMPA selective glutamate receptor activity.
2 Q8VHW5 (/IDA) Q8VHW9 (/IDA)
Calcium ion transport GO:0006816
The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
1 Q8WXS5 (/NAS)
Response to cocaine GO:0042220
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.
1 Q8VHW9 (/IDA)
Regulation of postsynaptic membrane neurotransmitter receptor levels GO:0099072
Any process that regulates the the local concentration of neurotransmitter receptor at the postsynaptic membrane.
1 Q8VHW2 (/IDA)

There are 30 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
AMPA glutamate receptor complex GO:0032281
An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus.
7 Q8VHW2 (/ISS) Q8WXS5 (/ISS) Q9JJV4 (/ISS) Q9JJV4 (/ISS) Q9UBN1 (/ISS) Q9UBN1 (/ISS) Q9UBN1 (/ISS)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
5 Q8VHW2 (/IDA) Q8VHW5 (/IDA) Q8VHW9 (/IDA) Q9JJV4 (/IDA) Q9JJV4 (/IDA)
L-type voltage-gated calcium channel complex GO:1990454
A type of voltage-dependent calcium channel responsible for excitation-contraction coupling of skeletal, smooth, and cardiac muscle. 'L' stands for 'long-lasting' referring to the length of activation.
5 Q8VHW5 (/ISS) Q8VHW9 (/ISS) Q8WXS5 (/ISS) Q9JJV4 (/ISS) Q9JJV4 (/ISS)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
4 Q8WXS5 (/TAS) Q9UBN1 (/TAS) Q9UBN1 (/TAS) Q9UBN1 (/TAS)
Endocytic vesicle membrane GO:0030666
The lipid bilayer surrounding an endocytic vesicle.
4 Q8WXS5 (/TAS) Q9UBN1 (/TAS) Q9UBN1 (/TAS) Q9UBN1 (/TAS)
AMPA glutamate receptor complex GO:0032281
An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus.
4 Q8VHW5 (/IDA) Q8VHW9 (/IDA) Q9JJV4 (/IDA) Q9JJV4 (/IDA)
L-type voltage-gated calcium channel complex GO:1990454
A type of voltage-dependent calcium channel responsible for excitation-contraction coupling of skeletal, smooth, and cardiac muscle. 'L' stands for 'long-lasting' referring to the length of activation.
4 Q8VHW2 (/IDA) Q9UBN1 (/IDA) Q9UBN1 (/IDA) Q9UBN1 (/IDA)
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
3 Q9UBN1 (/TAS) Q9UBN1 (/TAS) Q9UBN1 (/TAS)
Postsynaptic density GO:0014069
An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.
3 Q8VHW2 (/IDA) Q8VHW5 (/IDA) Q8VHW9 (/IDA)
Postsynaptic density GO:0014069
An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.
3 Q8VHW2 (/ISO) Q9JJV4 (/ISO) Q9JJV4 (/ISO)
AMPA glutamate receptor complex GO:0032281
An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus.
3 Q8VHW2 (/ISO) Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
3 Q8VHW2 (/ISO) Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Integral component of postsynaptic density membrane GO:0099061
The component of the postsynaptic density membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
3 Q8VHW2 (/IDA) Q8VHW5 (/IDA) Q8VHW9 (/IDA)
Integral component of postsynaptic density membrane GO:0099061
The component of the postsynaptic density membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
3 Q8VHW2 (/ISO) Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Cell surface GO:0009986
The external part of the cell wall and/or plasma membrane.
2 Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Postsynaptic density GO:0014069
An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.
2 Q8VHW5 (/ISS) Q8WXS5 (/ISS)
Somatodendritic compartment GO:0036477
The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon.
2 Q9JJV4 (/IDA) Q9JJV4 (/IDA)
Cell body GO:0044297
The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
2 Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Postsynaptic density membrane GO:0098839
The membrane component of the postsynaptic density. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.
2 Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
2 Q9JJV4 (/IMP) Q9JJV4 (/IMP)
L-type voltage-gated calcium channel complex GO:1990454
A type of voltage-dependent calcium channel responsible for excitation-contraction coupling of skeletal, smooth, and cardiac muscle. 'L' stands for 'long-lasting' referring to the length of activation.
2 Q9JJV4 (/ISO) Q9JJV4 (/ISO)
Voltage-gated calcium channel complex GO:0005891
A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential.
1 Q8WXS5 (/NAS)
Cell surface GO:0009986
The external part of the cell wall and/or plasma membrane.
1 Q8VHW9 (/IDA)
Dendrite membrane GO:0032590
The portion of the plasma membrane surrounding a dendrite.
1 Q8VHW5 (/IDA)
Dendrite membrane GO:0032590
The portion of the plasma membrane surrounding a dendrite.
1 Q8VHW2 (/ISO)
Cell body GO:0044297
The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
1 Q8VHW9 (/IDA)
Postsynaptic membrane GO:0045211
A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.
1 Q8VHW5 (/IDA)
Postsynaptic membrane GO:0045211
A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.
1 Q8VHW2 (/ISO)
Schaffer collateral - CA1 synapse GO:0098685
A synapse between the Schaffer collateral axon of a CA3 pyramidal cell and a CA1 pyramidal cell.
1 Q8VHW2 (/IDA)
Postsynaptic density membrane GO:0098839
The membrane component of the postsynaptic density. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.
1 Q8VHW9 (/IDA)