The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Tetracycline Repressor, domain 2
".
FunFam 22: Transcriptional regulator NfxB
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
13 |
P32265 (/IDA)
P32265 (/IDA)
P32265 (/IDA)
P32265 (/IDA)
P32265 (/IDA)
P32265 (/IDA)
P32265 (/IDA)
P32265 (/IDA)
Q9HVJ0 (/IDA)
Q9HVJ0 (/IDA)
(3 more) |
|
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
|
8 | P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) |
|
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
|
8 | P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) |
|
DNA-binding transcription repressor activity GO:0001217
Interacting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase.
|
8 | P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) |
|
DNA-binding transcription repressor activity GO:0001217
Interacting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase.
|
8 | P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) |
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
1 | Q882N2 (/ISS) |
There are 5 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Negative regulation of transporter activity GO:0032410
Any process that stops or reduces the activity of a transporter.
|
8 | P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) |
|
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
8 | P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) P32265 (/IMP) |
|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
5 | Q9HVJ0 (/IDA) Q9HVJ0 (/IDA) Q9HVJ0 (/IDA) Q9HVJ0 (/IDA) Q9HVJ0 (/IDA) |
|
Response to drug GO:0042493
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
|
5 | Q9HVJ0 (/EXP) Q9HVJ0 (/EXP) Q9HVJ0 (/EXP) Q9HVJ0 (/EXP) Q9HVJ0 (/EXP) |
|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q882N2 (/ISS) |
There are 2 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
|
8 | P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) P32265 (/IDA) |
|
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
|
8 | P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) P32265 (/IPI) |