CATH Superfamily 1.10.30.10

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	transcription factor 7 isoform X2	1842	3D	2lefA00	-	70.9
2	transcription factor Sox-2	1466	3D	2gzkA01	-	96.7
3	Putative transcription factor SOX-6	1270	3D	1i11A00	-	93.8
4	Transcription factor SOX-10	759		-	-	74.7
5	TOX high mobility group box family member 3	662	3D	2co9A00	-	81.0
6	High mobility group protein B1	565	3D	2yrqA01	-	93.6
7	Transcription factor SOX	515	3D	3u2bC00	-	77.2
8	transcription factor SOX-7	446	3D	3f27D00	-	74.8
9	Histone-lysine N-methyltransferase	440	3D	2yukA00	-	91.1
10	Capicua transcriptional repressor b	401		-	-	58.6
11	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1	335		-	-	70.4
12	axial regulator YABBY 5-like	311		-	-	63.1
13	High mobility group protein B3	283	3D	2eqzA00	-	98.9
14	HMG box transcription factor BBX	280	3D	1wz6A01	-	75.6
15	high mobility group protein B1	270	3D	2gzkA02	-	98.0
16	FACT complex subunit SSRP1	232	3D	1lwmA00	-	98.1
17	high mobility group protein B3	225	3D	2yqiA00	-	97.0
18	High mobility group protein B2	203	3D	1j3dA00	-	93.0
19	nucleolar transcription factor 1 isoform X2	175	3D	1k99A00	-	28.0
20	HMG box-containing protein 1	160	3D	2e6oA00	-	23.4
21	nucleolar transcription factor 1 isoform X1	151	3D	1v64A00	-	34.6
22	nucleolar transcription factor 1 isoform X2	145	3D	1v63A00	-	68.5
23	nucleolar transcription factor 1 isoform X2	141	3D	2hdzA00	-	29.4
24	Histone-lysine N-methyltransferase NSD2	127		-	-	86.6
25	HMG domain-containing protein 3 isoform X2	125		-	-	15.7
26	PMS1 homolog 1, mismatch repair system component	121	3D	2cs1A00	-	98.3
28	WD repeat and HMG-box DNA-binding protein 1	118	3D	2d7lA01	-	100.0
27	Transcription factor SOX-30	117		-	-	83.9
29	nucleolar transcription factor 1 isoform X2	106		-	-	27.1
30	HMG domain-containing protein 4 isoform X1	103		-	-	49.2
31	High mobility group protein 20A	102		-	-	22.0
32	FACT complex subunit SSRP1	99		-	-	46.5
33	nucleolar transcription factor 1 isoform X1	91		-	-	40.7
34	SWI/SNF-related matrix-associated regulator of chromatin subfamily E member 1-related	88		-	-	28.5
35	Maelstrom spermatogenic transposon silencer	74	3D	2ctoA01	-	76.6
36	high mobility group protein D	73	3D	1wxlA00	-	85.2
37	High mobility group protein B2	61		-	-	80.0
43	Transcription factor A, mitochondrial	57	3D	4nodH02	-	89.5
38	High mobility group box 4	54		-	-	86.1
39	protein CRABS CLAW isoform X3	53		-	-	48.3
40	SRY sex determining region Y	52		-	-	35.4
41	HMG box family protein	48		-	-	92.7
45	Transcription factor A, mitochondrial	47	3D	4nodH01	-	62.9
42	High mobility group protein 1.2	47		-	-	88.0
44	High mobility group B1	46		-	-	71.9
46	High mobility group box 4	38		-	-	90.2
47	Axial regulator YABBY	34		-	-	64.2
48	Putative SWI/SNF-related matrix-associated actin-dependent regulator chromatin subfamily E member	27		-	-	71.1
49	Related to NHP6B-nonhistone chromosomal protein	24		-	-	76.4
50	Nuclear autoantigen Sp-100	23		-	-	71.8
51	Transcription factor Sox-10	21		-	-	42.6
52	Non-histone chromosomal protein 6 homolog	21		-	-	72.4
55	High mobility group B protein 15	19		-	-	77.1
53	Protein CRABS CLAW	19		-	-	39.2
56	Brahma-associated protein 111kD	19		-	-	93.7
54	Swi snf-related matrix-associated actin-dependent regulator of	19		-	-	83.9
57	Protein maelstrom 2	17		-	-	85.3
58	IXR1p Transcriptional repressor	16		-	-	20.3
61	High mobility group protein B3	15		-	-	15.7
64	Mutant transcription factor sox9a	15	3D	4s2qD00	-	36.4
60	Transcription factor protein	15		-	-	91.6
59	Protein pop-1	15		-	-	76.0
62	Hmg-1.1	15		-	-	89.2
63	High mobility group protein B3	14		-	-	12.3
68	PolyBRoMo domain containing	13		-	-	23.0
65	Nhp10p	13		-	-	47.2
66	High mobility group family	13		-	-	4.0
67	Lysine-specific histone demethylase Aof2, putative	13		-	-	87.5
71	High mobility group protein	12		-	-	78.5
69	CBL-interacting protein kinase 33	12		-	-	10.0
70	Uncharacterized protein, isoform A	12		-	-	16.1
72	FACT complex subunit SSRP1	11		-	-	69.4
73	High mobility group protein 1 homolog	11		-	-	90.6
78	ARS-binding factor	10		-	-	0.0
74	SRY-related protein AMA1	10		-	-	32.4
80	ARS-binding factor	10		-	-	0.0
81	High mobility group protein B4, putative	10		-	-	12.7
75	Capicua transcriptional repressor a	10		-	-	41.2
76	Axial regulator YABBY 4	10		-	-	71.8
77	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related	10		-	-	20.5
79	IXR1p Transcriptional repressor	10		-	-	16.7
82	Mitochondrial transcription factor A, isoform B	9		-	-	15.2
83	High mobility group B protein 13	9		-	-	44.4
85	Chromatin-associated protein	8		-	-	16.4
86	Protein CBG16280	8		-	-	76.9
84	HMG type nucleosome/chromatin assembly factor	8		-	-	30.4
87	Uncharacterized protein	7		-	-	9.7
89	high mobility group B protein 7 isoform X1	6		-	-	50.6
91	HMG High mobility group	6		-	-	4.1
92	High mobility group B protein 13	6		-	-	63.5
90	High mobility group protein 2	6		-	-	10.9
144	High mobility group protein B1	6	3D	1nhnA00	-	41.1
93	AGAP002022-PA	6		-	-	93.6
88	Sex-determining region Y protein	6		-	-	18.0
96	Chromodomain helicase DNA binding protein 3	5		-	-	11.5
94	High mobility group B protein 4	5		-	-	37.6
95	High mobility group protein-like tdp-1, putative	5		-	-	8.8
97	Similar to transcription factor HMG	5		-	-	8.3
101	Testis-enriched HMG-box-containing protein 1	4		-	-	20.2
108	High mobility group protein-like tdp-1, putative	4		-	-	5.1
105	High mobility group HMG	4		-	-	7.0
109	Lysine-specific histone demethylase Aof2	4		-	-	4.7
99	Axial regulator YABBY 4	4		-	-	13.0
106	Zgc:165618 protein	4		-	-	50.6
98	Uncharacterized protein	4		-	-	45.5
107	transcription factor protein	4		-	-	4.9
110	Polybromo 1	4		-	-	50.4
102	Transcription factor Sox-7	4		-	-	10.1
100	Sex-determining region Y protein	4		-	-	58.1
104	Transcription factor SOX-2	4		-	-	21.5
103	HMG box-containing protein	4		-	-	12.4
116	HMG box-containing protein 1	3		-	-	2.8
112	Transcription factor 7-like 2	3		-	-	10.0
117	Uncharacterized protein	3		-	-	6.0
111	Protein CBG16744	3		-	-	61.9
113	GH11850p	3		-	-	12.8
120	protein polybromo-1 isoform X1	3		-	-	1.3
121	LD26355p	3		-	-	6.7
119	High mobility group protein homolog TDP-1	3		-	-	0.0
115	AGAP005183-PA	3		-	-	1.7
122	PMS1 homolog 1, mismatch repair system component	3		-	-	9.5
118	High mobility group protein homolog TDP-1	3		-	-	0.0
114	Gcf1p	3		-	-	0.0
123	FACT complex subunit SSRP1	3		-	-	40.2
127	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1	2		-	-	0.0
136	HMG1/2 High mobility group	2		-	-	23.5
137	Histone-lysine N-methyltransferase	2		-	-	0.0
142	PMS1 homolog 1, mismatch repair system component	2		-	-	1.4
128	High mobility group protein	2		-	-	49.6
132	HMG box protein, putative AFU_orthologue AFUA_1G10040	2		-	-	0.0
139	Polybromo-1	2		-	-	2.1
129	High mobility group-T protein	2		-	-	0.0
135	Uncharacterized protein	2		-	-	42.4
124	Uncharacterized protein	2		-	-	31.0
131	HMG box protein, putative AFU_orthologue AFUA_1G10040	2		-	-	0.0
141	YALI0D26972p	2		-	-	0.0
138	Isw-1	2		-	-	3.1
130	Uncharacterized protein	2		-	-	12.5
140	FACT complex subunit SSRP1	2		-	-	0.0
125	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1	2		-	-	0.0
126	Uncharacterized protein	2		-	-	0.0
143	Protein CBG07235	2		-	-	46.9
133	Protein CBG16280	2		-	-	5.6
134	Uncharacterized protein	2		-	-	0.0
153	HMG transcription factor SoxC	1		-	-	0.0
180	Uncharacterized protein	1		-	-	0.0
191	HMG	1		-	-	0.0
187	HMG	1		-	-	0.0
170	Uncharacterized protein	1		-	-	0.0
155	Uncharacterized protein	1		-	-	0.0
175	Uncharacterized protein	1		-	-	0.0
198	PHDfinger domain-containing protein	1		-	-	0.0
202	Predicted protein	1		-	-	0.0
184	Uncharacterized protein	1		-	-	0.0
181	High mobility group box 2	1		-	-	0.0
154	Predicted protein	1		-	-	0.0
158	HMG box family protein	1		-	-	0.0
165	Uncharacterized protein	1		-	-	0.0
147	Uncharacterized protein	1		-	-	0.0
149	High mobility group protein C, putative	1		-	-	0.0
168	Uncharacterized protein	1		-	-	0.0
145	Uncharacterized protein	1		-	-	0.0
178	High mobility group protein	1		-	-	0.0
152	Uncharacterized protein	1		-	-	0.0
200	Uncharacterized protein	1		-	-	0.0
161	HMG box-containing protein C28F2.11	1		-	-	0.0
192	Predicted protein	1		-	-	0.0
199	Uncharacterized protein	1		-	-	0.0
195	FACT complex subunit SSRP1	1		-	-	0.0
174	Predicted protein	1		-	-	0.0
188	Upstream-binding factor 1-like protein 1	1		-	-	0.0
183	Uncharacterized protein	1		-	-	0.0
148	HMG box family protein	1		-	-	0.0
157	Uncharacterized protein	1		-	-	0.0
179	Uncharacterized protein	1		-	-	0.0
146	Protein CBG08365	1		-	-	0.0
164	Maelstrom	1		-	-	0.0
160	FACT complex subunit SSRP1	1		-	-	0.0
193	FACT complex subunit SSRP1	1		-	-	0.0
189	Predicted protein	1		-	-	0.0
177	AFL219Wp	1		-	-	0.0
151	Kinetoplast-associated protein 4	1		-	-	0.0
182	Uncharacterized protein	1		-	-	0.0
167	Uncharacterized protein	1		-	-	0.0
163	Protein maelstrom	1		-	-	0.0
186	Uncharacterized protein	1		-	-	0.0
173	Chromosome 1, whole genome shotgun sequence	1		-	-	0.0
156	SRY-box 18	1		-	-	0.0
196	Uncharacterized protein	1		-	-	0.0
194	Putative high mobility group B protein 11	1		-	-	0.0
171	HMG box-containing protein C10F6.08c	1		-	-	0.0
197	Uncharacterized protein	1		-	-	0.0
176	Predicted protein	1		-	-	0.0
150	Mismatch-binding protein cmb1	1		-	-	0.0
159	Uncharacterized protein	1		-	-	0.0
162	HMG box-containing protein C19G7.04	1		-	-	0.0
201	Uncharacterized protein	1		-	-	0.0
169	Uncharacterized protein	1		-	-	0.0
190	Predicted protein	1		-	-	0.0
172	High mobility group B protein 14	1		-	-	0.0
166	Uncharacterized protein	1		-	-	0.0
185	Uncharacterized protein	1		-	-	0.0