The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 72: Transcriptional regulatory protein RcsB

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
196 P0DMC7 (/IPI) P0DMC7 (/IPI) P0DMC7 (/IPI) P0DMC7 (/IPI) P0DMC7 (/IPI) P0DMC7 (/IPI) P0DMC7 (/IPI) P0DMC7 (/IPI) P0DMC7 (/IPI) P0DMC7 (/IPI)
(186 more)
DNA-binding transcription activator activity GO:0001216
Interacting selectively and non-covalently with a specific DNA sequence in order to activate or increase the frequency, rate or extent of transcription by a RNA polymerase.
170 P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA)
(160 more)
DNA-binding transcription repressor activity GO:0001217
Interacting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase.
170 P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA)
(160 more)

There are 7 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
170 P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA)
(160 more)
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
170 P0DMC7 (/IEP) P0DMC7 (/IEP) P0DMC7 (/IEP) P0DMC7 (/IEP) P0DMC7 (/IEP) P0DMC7 (/IEP) P0DMC7 (/IEP) P0DMC7 (/IEP) P0DMC7 (/IEP) P0DMC7 (/IEP)
(160 more)
Positive regulation of cell projection organization GO:0031346
Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.
170 P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP)
(160 more)
Single-species biofilm formation on inanimate substrate GO:0044011
A process in which microorganisms of the same species attach to and grow on an inanimate surface such as a rock or pipe, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.
170 P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP)
(160 more)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
170 P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP)
(160 more)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
170 P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP)
(160 more)
Response to antibiotic GO:0046677
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
170 P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP) P0DMC7 (/IMP)
(160 more)

There are 1 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
170 P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA) P0DMC7 (/IDA)
(160 more)