CATH Superfamily 4.10.60.10

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Enzyme?	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1087	Gag polyprotein	49394		3D	2m3zA00	-	90.4
10828	CCHC-type zinc finger protein	2102	EC		-	-	86.5
1272	Gag-pol fusion polyprotein	1934	EC		-	-	92.3
10658	Gag-pol fusion polyprotein	1804	EC	3D	1eskA00	-	95.5
6859	Cellular nucleic acid-binding protein	1040			-	-	48.4
1125	Gag-pol fusion polyprotein	977	EC		-	-	93.0
5929	Zinc finger CCHC domain-containing protein 24	630			-	-	75.5
1439	Retrovirus-related Gag polyprotein	437	EC		-	-	99.2
10670	Protein lin-28 homolog A	415		3D	3trzA02	-	94.1
10626	SREK1-interacting protein 1	312			-	-	82.0
1601	Serine/arginine-rich splicing factor 7	275			-	-	84.7
10635	RNA-binding motif protein 4B	274			-	-	76.9
5659	Cleavage and polyadenylation-specificity factor subunit 4	245			-	-	48.1
5072	Related to Protein AIR2	222			-	-	86.2
10776	Retrotransposon-derived protein PEG10	220			-	-	92.2
10801	Zinc finger CCHC domain-containing protein 8	219			-	-	91.5
10674	Serine/arginine-rich splicing factor RSZ23	212			-	-	89.2
1451	Zinc finger CCHC domain-containing protein 10	207			-	-	75.7
10600	Splicing factor 1, isoform CRA_d	203			-	-	62.2
10688	Gag polyprotein pr65	201	EC	3D	1a6bB00	-	90.9
10575	MADP-1 protein	198			-	-	82.4
3548	Terminal uridylyltransferase 7 isoform 2	184	EC		-	-	68.7
4313	E3 ubiquitin-protein ligase RBBP6	179	EC		-	-	67.2
10874	Putative actin depolymerizing factor	162			-	-	90.3
10656	Gag polyprotein	149			-	-	85.5
10794	Zinc finger CCHC domain-containing protein 7	149	EC		-	-	86.5
1281	Gag-Pol fusion polyprotein	141	EC		-	-	97.1
10540	Zinc finger CCHC domain-containing protein 7	136			-	-	79.9
10691	Gag polyprotein	129			-	-	66.4
8868	Zinc finger protein GIS2	119			-	-	9.6
3005	Zinc finger CCHC domain-containing protein 2	114			-	-	47.4
6598	RNA-binding protein lark	109	EC		-	-	71.3
10732	Protein air1	103		3D	3nybB00	-	42.8
7363	Air2p	86			-	-	0.0
10664	Cellular nucleic acid binding protein	80			-	-	81.7
2978	Zinc finger CCHC domain-containing protein 14	78			-	-	53.2
2308	Splicing factor 1, isoform CRA_a	78			-	-	73.4
10590	Terminal uridylyltransferase 4-like protein	75	EC		-	-	53.4
1120	Gag polyprotein	74			-	-	95.9
1007	Uncharacterized protein	71			-	-	51.0
10780	Nucleolar RNA helicase 2	62	EC		-	-	78.7
694	Gag-pol fusion polyprotein	60	EC		-	-	89.1
10684	Cellular nucleic acid-binding protein	60	EC		-	-	86.2
9416	Pre-mRNA-splicing factor SLU7	54			-	-	3.2
10722	Retrovirus-related Gag polyprotein	48	EC		-	-	94.1
6889	Zinc finger CCHC domain-containing protein 3	45			-	-	28.7
10669	Zinc finger CCHC domain-containing protein 9	43			-	-	92.4
4343	Nucleolar protein of 40 kDa	26			-	-	49.9
10570	Gag polyprotein	25	EC		-	-	49.7
10809	Retrovirus-related Pol polyprotein from transposon TNT 1-94	23	EC		-	-	81.3
71	Uncharacterized protein	22			-	-	64.0
2178	Gag-pol fusion polyprotein	20	EC		-	-	49.7
5199	U11/U12 small nuclear ribonucleoprotein 31 kDa protein	18			-	-	40.3
10867	Serine/arginine-rich splicing factor RS2Z33	17			-	-	11.5
1276	Paraneoplastic antigen Ma3	17			-	-	47.2
10560	Putative uncharacterized protein DKFZp469A176	16			-	-	20.7
1046	Gag-pol fusion polyprotein	14	EC		-	-	46.0
803	Truncated Pr160 gag-pol polyprotein	13	EC	3D	2ihxA00	-	21.9
1105	Protein lin-28	12			-	-	10.8
10593	Gag polyprotein	11	EC		-	-	2.7
4479	Cellular nucleic acid-binding protein	9			-	-	23.2
3257	DNA-binding protein HEXBP	8			-	-	13.3
3585	GE14378	7			-	-	9.6
1273	Gag polyprotein	7			-	-	58.7
1934	Gag polyprotein	7	EC	3D	2ec7A00	-	23.3
10779	Putative uncharacterized protein	7			-	-	14.0
10604	Zinc finger CCHC domain-containing protein 16	5			-	-	24.5
10692	GAG polyprotein	5	EC		-	-	63.8
2287	CG3800, isoform B	5			-	-	2.9
1985	Cellular nucleic acid-binding protein	5			-	-	12.1
2677	Glycine-rich RNA-binding protein RZ1C	4			-	-	31.7
5741	Cellular nucleic acid-binding protein	4			-	-	27.0
228	Replication protein A 70 kDa DNA-binding subunit C	4			-	-	4.5
10690	Gag polyprotein	3			-	-	43.5
5763	Cleavage and polyadenylation specificity factor subunit 4	3			-	-	14.1
10633	RNA-binding region RNP-1 domain-containing protein	2			-	-	42.3
10862	Zinc finger protein GIS2	2			-	-	0.0
112	Putative uncharacterized protein At5g43630	2			-	-	7.7
7031	Cellular nucleic acid-binding protein	2			-	-	0.0
10763	Cold shock protein 1	2			-	-	0.0
4478	Transposon Ty3-I Gag-Pol polyprotein	2	EC		-	-	0.0
10630	Uncharacterized protein	2			-	-	0.0
10806	Arginine methyltransferase-interacting ring finger protein	2			-	-	34.4
10774	Glycine-rich RNA-binding protein RZ1A	1			-	-	0.0
10863	Nucleic-acid-binding protein from transposon X-element	1			-	-	0.0
10614	Uncharacterized RING finger protein P8B7.15c	1			-	-	0.0
10629	mRNA 3'-end-processing protein YTH1	1			-	-	0.0
8351	Gag polyprotein	1			-	-	0.0
10704	Gag protein	1			-	-	0.0
10649	Cellular nucleic acid-binding protein	1			-	-
1109	Zinc finger CCHC domain-containing protein 23	1			-	-	0.0
10716	Branchpoint-bridging protein, putative	1			-	-	0.0
966	Capsid protein	1			-	-	0.0
6320	Cellular nucleic acid binding protein	1			-	-	0.0
6083	Glycine-rich RNA-binding protein RZ1B	1			-	-	0.0