CATH Superfamily 2.30.30.140
The name of this superfamily has been modified since the most recent official CATH+ release (v4_2_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 3039: Fragile X mental retardation syndrome-related prot...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 33 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
10 | O70523 (/ISS) P51115 (/ISS) Q2KHP9 (/ISS) Q2TBT7 (/ISS) Q5BJ56 (/ISS) Q5XI81 (/ISS) Q61584 (/ISS) Q6GLC9 (/ISS) Q7ZTQ5 (/ISS) Q9WVR4 (/ISS) |
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
|
10 | O70523 (/ISS) P51115 (/ISS) Q2KHP9 (/ISS) Q2TBT7 (/ISS) Q5BJ56 (/ISS) Q5XI81 (/ISS) Q61584 (/ISS) Q6GLC9 (/ISS) Q7ZTQ5 (/ISS) Q9WVR4 (/ISS) |
RNA strand annealing activity GO:0033592
Facilitates the base-pairing of complementary single-stranded RNA.
|
9 | O70523 (/ISS) P51115 (/ISS) Q2KHP9 (/ISS) Q2TBT7 (/ISS) Q5BJ56 (/ISS) Q5XI81 (/ISS) Q61584 (/ISS) Q6GLC9 (/ISS) Q7ZTQ5 (/ISS) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
5 | I3LAK5 (/ISS) Q2KHP9 (/ISS) Q5BJ56 (/ISS) Q6GLC9 (/ISS) Q7ZTQ5 (/ISS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
4 | P51114 (/IPI) P51116 (/IPI) Q61584 (/IPI) Q9WVR4 (/IPI) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
3 | P51114 (/IDA) P51115 (/IDA) P51116 (/IDA) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
3 | I3LAK5 (/ISS) Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
G-quadruplex RNA binding GO:0002151
Interacting selectively and non-covalently with G-quadruplex RNA structures, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
2 | Q61584 (/ISO) Q9WVR4 (/ISO) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
2 | P51114 (/TAS) P51116 (/TAS) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Microtubule binding GO:0008017
Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Poly(U) RNA binding GO:0008266
Interacting selectively and non-covalently with a sequence of uracil residues in an RNA molecule.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Translation repressor activity GO:0030371
Antagonizes ribosome-mediated translation of mRNA into a polypeptide.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Poly(G) binding GO:0034046
Interacting selectively and non-covalently with a sequence of guanine residues in an RNA molecule.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Methylated histone binding GO:0035064
Interacting selectively and non-covalently with a histone protein in which a residue has been modified by methylation. Histones are any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
SiRNA binding GO:0035197
Interacting selectively and non-covalently with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
RNA stem-loop binding GO:0035613
Interacting selectively and non-covalently with a stem-loop in an RNA molecule. An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
2 | P51114 (/IDA) P51116 (/IDA) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
2 | Q61584 (/ISO) Q9WVR4 (/ISO) |
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
|
2 | P51114 (/IDA) P51116 (/IDA) |
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
|
2 | Q61584 (/ISO) Q9WVR4 (/ISO) |
MRNA 5'-UTR binding GO:0048027
Interacting selectively and non-covalently with the 5' untranslated region of an mRNA molecule.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Dynein complex binding GO:0070840
Interacting selectively and non-covalently with a dynein complex, a protein complex that contains two or three dynein heavy chains and several light chains, and has microtubule motor activity.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Sequence-specific mRNA binding GO:1990825
Interacting selectively and non-covalently with messenger RNA (mRNA) of a specific nucleotide composition or a specific sequence motif.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
G-quadruplex RNA binding GO:0002151
Interacting selectively and non-covalently with G-quadruplex RNA structures, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad.
|
1 | Q61584 (/IDA) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
1 | Q61584 (/IDA) |
RNA strand annealing activity GO:0033592
Facilitates the base-pairing of complementary single-stranded RNA.
|
1 | P51114 (/IDA) |
RNA strand annealing activity GO:0033592
Facilitates the base-pairing of complementary single-stranded RNA.
|
1 | Q61584 (/ISO) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
1 | P51116 (/IPI) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
1 | Q9WVR4 (/ISO) |
There are 35 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Positive regulation of gene silencing by miRNA GO:2000637
Any process that activates or increases the frequency, rate or extent of gene silencing by miRNA.
|
9 | O70523 (/ISS) P51115 (/ISS) Q2KHP9 (/ISS) Q2TBT7 (/ISS) Q5BJ56 (/ISS) Q5XI81 (/ISS) Q61584 (/ISS) Q6GLC9 (/ISS) Q7ZTQ5 (/ISS) |
Muscle organ development GO:0007517
The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.
|
3 | I3LAK5 (/ISS) Q5BJ56 (/ISS) Q7ZTQ5 (/ISS) |
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA.
|
3 | I3LAK5 (/ISS) Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Positive regulation of receptor internalization GO:0002092
Any process that activates or increases the frequency, rate or extent of receptor internalization.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Cellular response to DNA damage stimulus GO:0006974
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Glutamate receptor signaling pathway GO:0007215
A series of molecular signals initiated by the binding of glutamate to a glutamate receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Negative regulation of gene expression GO:0010629
Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Positive regulation of histone phosphorylation GO:0033129
Any process that activates or increases the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Cellular response to UV GO:0034644
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Regulation of mRNA stability GO:0043488
Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Negative regulation of translational initiation GO:0045947
Any process that stops, prevents, or reduces the frequency, rate or extent of translational initiation.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Regulation of neurotransmitter secretion GO:0046928
Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
MRNA transport GO:0051028
The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Regulation of filopodium assembly GO:0051489
Any process that modulates the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Positive regulation of filopodium assembly GO:0051491
Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Regulation of gene silencing by miRNA GO:0060964
Any process that modulates the rate, frequency, or extent of the downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: mRNA cleavage or translational repression.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Regulation of dendritic spine development GO:0060998
Any process that modulates the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Positive regulation of dendritic spine development GO:0060999
Any process that increases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Cellular response to hydroxyurea GO:0072711
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyurea stimulus.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Regulation of neuronal action potential GO:0098908
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Negative regulation of long term synaptic depression GO:1900453
Any process that stops, prevents or reduces the frequency, rate or extent of long term synaptic depression.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Negative regulation of voltage-gated calcium channel activity GO:1901386
Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated calcium channel activity.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Positive regulation of proteasomal protein catabolic process GO:1901800
Any process that activates or increases the frequency, rate or extent of proteasomal protein catabolic process.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Positive regulation of mRNA binding GO:1902416
Any process that activates or increases the frequency, rate or extent of mRNA binding.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Negative regulation of synaptic vesicle exocytosis GO:2000301
Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle exocytosis.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Negative regulation of cytoplasmic translation GO:2000766
Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Positive regulation of response to DNA damage stimulus GO:2001022
Any process that activates or increases the frequency, rate or extent of response to DNA damage stimulus.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Apoptotic process GO:0006915
A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
|
1 | P51114 (/TAS) |
Muscle organ development GO:0007517
The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.
|
1 | P51115 (/IDA) |
Muscle organ development GO:0007517
The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.
|
1 | Q61584 (/IMP) |
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA.
|
1 | Q61584 (/IDA) |
Positive regulation of gene silencing by miRNA GO:2000637
Any process that activates or increases the frequency, rate or extent of gene silencing by miRNA.
|
1 | P51114 (/IDA) |
Positive regulation of gene silencing by miRNA GO:2000637
Any process that activates or increases the frequency, rate or extent of gene silencing by miRNA.
|
1 | Q61584 (/ISO) |
There are 53 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
4 | I3LAK5 (/ISS) P51115 (/ISS) Q2KHP9 (/ISS) Q7ZTQ5 (/ISS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
4 | P51116 (/IDA) Q5BJ56 (/IDA) Q61584 (/IDA) Q6GLC9 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
4 | I3LAK5 (/ISS) P51115 (/ISS) Q2KHP9 (/ISS) Q7ZTQ5 (/ISS) |
Cell GO:0005623
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
|
3 | B6CVD8 (/IDA) H0Z2U8 (/IDA) H0ZJZ2 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | Q5BJ56 (/IDA) Q61584 (/IDA) Q6GLC9 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
3 | B4DXZ6 (/IDA) P51114 (/IDA) P51116 (/IDA) |
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
|
3 | I3LAK5 (/ISS) Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Axon GO:0030424
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
|
3 | I3LAK5 (/ISS) Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, often branched, morphology, receives and integrates signals from other neurons or from sensory stimuli, and conducts a nerve impulse towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
|
3 | I3LAK5 (/ISS) Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Dendritic spine GO:0043197
A small, membranous protrusion from a dendrite that forms a postsynaptic compartment - typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable including \thin\, \stubby\, \mushroom\, and \branched\, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity.
|
3 | I3LAK5 (/ISS) Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
|
3 | I3LAK5 (/ISS) Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Chromosome GO:0005694
A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
2 | P51114 (/TAS) P51116 (/TAS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
2 | Q61584 (/ISO) Q9WVR4 (/ISO) |
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
|
2 | Q61584 (/IDA) Q9WVR4 (/IDA) |
Chromocenter GO:0010369
A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Postsynaptic density GO:0014069
An electron dense network of proteins within and adjacent to the postsynaptic membrane in asymetric synapses. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
2 | P51114 (/IDA) P51116 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
2 | Q61584 (/ISO) Q9WVR4 (/ISO) |
Extrinsic component of plasma membrane GO:0019897
The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, often branched, morphology, receives and integrates signals from other neurons or from sensory stimuli, and conducts a nerve impulse towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
|
2 | Q61584 (/IDA) Q9WVR4 (/IDA) |
Growth cone GO:0030426
The migrating motile tip of a growing nerve cell axon or dendrite.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Intracellular ribonucleoprotein complex GO:0030529
An intracellular macromolecular complex containing both protein and RNA molecules.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Filopodium tip GO:0032433
The end of a filopodium distal to the body of the cell.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Cell projection GO:0042995
A prolongation or process extending from a cell, e.g. a flagellum or axon.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Neuron projection GO:0043005
A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Perikaryon GO:0043204
The portion of the cell soma (neuronal cell body) that excludes the nucleus.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Axon terminus GO:0043679
Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal button is a specialized region of it.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Neuronal ribonucleoprotein granule GO:0071598
A ribonucleoprotein complex that is found in the cytoplasm of axons and dendrites, and transports translationally silenced mRNAs to dendritic synapses, where they are released and translated in response to specific exogenous stimuli.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Glial cell projection GO:0097386
A prolongation or process extending from a glial cell.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Presynapse GO:0098793
The part of a synapse that is part of the presynaptic cell.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Postsynapse GO:0098794
The part of a synapse that is part of the post-synaptic cell.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Dendritic filopodium GO:1902737
A small, membranous protrusion found primarily on dendritic stretches of developing neurons. May receive synaptic input, and can develop into dendritic spines.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Growth cone filopodium GO:1990812
A thin, stiff protrusion extended by the leading edge of an axonal or dendritic growth cone.
|
2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
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2 | Q2KHP9 (/ISS) Q6GLC9 (/ISS) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
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1 | P51114 (/TAS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
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1 | Q9WVR4 (/ISO) |
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
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1 | P51114 (/TAS) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
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1 | I3LAK5 (/ISS) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
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1 | P51116 (/TAS) |
Axon GO:0030424
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
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1 | Q61584 (/IDA) |
Ribonucleoprotein granule GO:0035770
A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.
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1 | Q61584 (/IDA) |
Ribonucleoprotein granule GO:0035770
A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.
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1 | I3LAK5 (/ISS) |
Costamere GO:0043034
Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.
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1 | Q61584 (/IDA) |
Costamere GO:0043034
Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.
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1 | I3LAK5 (/ISS) |
Dendritic spine GO:0043197
A small, membranous protrusion from a dendrite that forms a postsynaptic compartment - typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable including \thin\, \stubby\, \mushroom\, and \branched\, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity.
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1 | Q61584 (/IDA) |
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
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1 | Q61584 (/IDA) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
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1 | P51116 (/IDA) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
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1 | Q9WVR4 (/ISO) |