CATH Superfamily 2.30.29.30
Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)
The name of this superfamily has been modified since the most recent official CATH+ release (v4_2_0). At the point of the last release, this superfamily was named:
"Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)
".
FunFam 22483: Band 4.1-like protein 5
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
			The search results have been sorted with the annotations that are found most frequently at the top of the
			list. The results can be filtered by typing text into the search box at the top of the table.
			
			
	| GO Term | Annotations | Evidence | 
|---|---|---|
| Cytoskeletal protein binding GO:0008092 Interacting selectively and non-covalently with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton). | 6 | A0T1Z4 (/ISS) A0T1Z5 (/ISS) A8JPC8 (/ISS) B7Z0J2 (/ISS) E2QCZ6 (/ISS) Q9VFU8 (/ISS) | 
| Protein binding GO:0005515 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | 2 | Q8BGS1 (/IPI) Q9JMC8 (/IPI) | 
| Structural constituent of cytoskeleton GO:0005200 The action of a molecule that contributes to the structural integrity of a cytoskeletal structure. | 1 | Q9H329 (/TAS) | 
| Protein domain specific binding GO:0019904 Interacting selectively and non-covalently with a specific domain of a protein. | 1 | Q8BGS1 (/IPI) | 
There are 56 GO terms relating to "biological process"
			The search results have been sorted with the annotations that are found most frequently at the top of the
			list. The results can be filtered by typing text into the search box at the top of the table.
			
			
	| GO Term | Annotations | Evidence | 
|---|---|---|
| Establishment or maintenance of apical/basal cell polarity GO:0035088 Any cellular process that results in the specification, formation or maintenance polarization of a cell's architecture along its apical/basal axis so that the apical and basal regions of the cell have different membrane, extracellular matrix and sub-membrane cellular components. | 8 | A0T1Z4 (/IMP) A0T1Z5 (/IMP) B7Z0J2 (/IMP) F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) Q9VFU8 (/IMP) | 
| Kidney development GO:0001822 The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine. | 4 | F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) | 
| Germ-band shortening GO:0007390 The spreading of the amnioserosa from its compressed state to cover the whole of the dorsal surface. Initiating in the thorax and spreading posteriorly, it is accompanied by the transition from a parasegmental to segmental division of the embryo. | 4 | A0T1Z4 (/IMP) A0T1Z5 (/IMP) B7Z0J2 (/IMP) Q9VFU8 (/IMP) | 
| Dorsal closure GO:0007391 The process during Drosophila embryogenesis whereby the ectodermal cells of the lateral epithelium stretch in a coordinated fashion to internalize the amnioserosa cells and close the embryo dorsally. | 4 | A0T1Z4 (/IMP) A0T1Z5 (/IMP) B7Z0J2 (/IMP) Q9VFU8 (/IMP) | 
| Head involution GO:0008258 Movement of the anterior ectoderm to the interior of the embryo. | 4 | A0T1Z4 (/IMP) A0T1Z5 (/IMP) B7Z0J2 (/IMP) Q9VFU8 (/IMP) | 
| Dorsal motor nucleus of vagus nerve development GO:0021744 The process whose specific outcome is the progression of the dorsal motor nucleus of the vagus nerve over time, from its formation to the mature structure. | 4 | F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) | 
| Cellular protein complex localization GO:0034629 A protein complex localization process that takes place at the cellular level; as a result, a protein complex is transported to, or maintained in, a specific location within a cell. | 4 | F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) | 
| Eye photoreceptor cell development GO:0042462 Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve. | 4 | A0T1Z4 (/IMP) A0T1Z5 (/IMP) B7Z0J2 (/IMP) Q9VFU8 (/IMP) | 
| Establishment or maintenance of epithelial cell apical/basal polarity GO:0045197 Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell. | 4 | F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) | 
| Establishment of epithelial cell apical/basal polarity GO:0045198 The specification and formation of the apicobasal polarity of an epithelial cell. | 4 | A0T1Z4 (/IGI) A0T1Z5 (/IGI) B7Z0J2 (/IGI) Q9VFU8 (/IGI) | 
| Maintenance of epithelial cell apical/basal polarity GO:0045199 The maintenance of the apicobasal polarity of an epithelial cell. | 4 | F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) | 
| Positive regulation of Notch signaling pathway GO:0045747 Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway. | 4 | F1Q9F0 (/IEP) F1QVV9 (/IEP) F6NJ58 (/IEP) Q6PNC5 (/IEP) | 
| Amnioserosa maintenance GO:0046665 Maintenance of the amnioserosa, an epithelium that occupies a hole in the embryonic dorsal epidermis. | 4 | A0T1Z4 (/IMP) A0T1Z5 (/IMP) B7Z0J2 (/IMP) Q9VFU8 (/IMP) | 
| Embryonic eye morphogenesis GO:0048048 The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. | 4 | F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) | 
| Embryonic retina morphogenesis in camera-type eye GO:0060059 The process in which the anatomical structure of the retina is generated and organized in a camera-type eye during the embryonic life stage. | 4 | F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) | 
| Actomyosin structure organization GO:0031032 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments. | 2 | Q8BGS1 (/IDA) Q9H329 (/IDA) | 
| Cell morphogenesis involved in differentiation GO:0000904 The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. | 1 | Q8BGS1 (/IMP) | 
| In utero embryonic development GO:0001701 The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus. | 1 | Q8BGS1 (/IMP) | 
| Somitogenesis GO:0001756 The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. | 1 | Q8BGS1 (/IMP) | 
| Epithelial to mesenchymal transition GO:0001837 A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. | 1 | Q8BGS1 (/IMP) | 
| Neural plate morphogenesis GO:0001839 The process in which the anatomical structures of the neural plate are generated and organized. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue. | 1 | Q8BGS1 (/IMP) | 
| Positive regulation of cell-matrix adhesion GO:0001954 Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix. | 1 | Q8BGS1 (/IMP) | 
| Epithelial cell morphogenesis GO:0003382 The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state. | 1 | Q8BGS1 (/IMP) | 
| Apical constriction GO:0003383 The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell. | 1 | Q8BGS1 (/IDA) | 
| Substrate-dependent cell migration, cell attachment to substrate GO:0006931 The formation of adhesions that stabilize protrusions at the leading edge of a migrating cell; involves integrin activation, clustering, and the recruitment of structural and signaling components to nascent adhesions. | 1 | Q8BGS1 (/IMP) | 
| Ectoderm development GO:0007398 The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation. | 1 | Q8BGS1 (/IMP) | 
| Endoderm development GO:0007492 The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues. | 1 | Q8BGS1 (/IMP) | 
| Mesoderm development GO:0007498 The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue. | 1 | Q8BGS1 (/IMP) | 
| Mesoderm migration involved in gastrulation GO:0007509 The migration of mesodermal cells during gastrulation to help establish the multilayered body plan of the organism. | 1 | Q8BGS1 (/IMP) | 
| Unidimensional cell growth GO:0009826 The process in which a cell irreversibly increases in size in one | 1 | Q8BGS1 (/IDA) | 
| Posttranscriptional regulation of gene expression GO:0010608 Any process that modulates the frequency, rate or extent of gene expression after the production of an RNA transcript. | 1 | Q8BGS1 (/IMP) | 
| Positive regulation of gene expression GO:0010628 Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form. | 1 | Q9H329 (/IMP) | 
| Positive regulation of gene expression GO:0010628 Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form. | 1 | Q9JMC8 (/ISO) | 
| Positive regulation of epithelial cell migration GO:0010634 Any process that activates or increases the frequency, rate or extent of epithelial cell migration. | 1 | Q8BGS1 (/IMP) | 
| Positive regulation of epithelial to mesenchymal transition GO:0010718 Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. | 1 | Q8BGS1 (/IMP) | 
| Negative regulation of cell-cell adhesion GO:0022408 Any process that stops, prevents or reduces the rate or extent of cell adhesion to another cell. | 1 | Q8BGS1 (/IMP) | 
| Actin cytoskeleton organization GO:0030036 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. | 1 | Q8BGS1 (/IDA) | 
| Actin cytoskeleton organization GO:0030036 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. | 1 | Q8BGS1 (/IMP) | 
| Actomyosin structure organization GO:0031032 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments. | 1 | Q9JMC8 (/ISO) | 
| Negative regulation of protein binding GO:0032091 Any process that stops, prevents, or reduces the frequency, rate or extent of protein binding. | 1 | Q8BGS1 (/IDA) | 
| Positive regulation of protein binding GO:0032092 Any process that activates or increases the frequency, rate or extent of protein binding. | 1 | Q8BGS1 (/IDA) | 
| Somite rostral/caudal axis specification GO:0032525 The establishment, maintenance and elaboration of the rostro-caudal axis of a somite, prior to the morphological formation of a somite boundary. | 1 | Q8BGS1 (/IMP) | 
| Wound healing GO:0042060 The series of events that restore integrity to a damaged tissue, following an injury. | 1 | Q9H329 (/IDA) | 
| Wound healing GO:0042060 The series of events that restore integrity to a damaged tissue, following an injury. | 1 | Q9JMC8 (/ISO) | 
| Positive regulation of cell adhesion GO:0045785 Any process that activates or increases the frequency, rate or extent of cell adhesion. | 1 | Q9H329 (/IMP) | 
| Positive regulation of cell adhesion GO:0045785 Any process that activates or increases the frequency, rate or extent of cell adhesion. | 1 | Q9JMC8 (/ISO) | 
| Axial mesoderm development GO:0048318 The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord. | 1 | Q8BGS1 (/IMP) | 
| Axial mesoderm morphogenesis GO:0048319 The process in which the anatomical structures of the axial mesoderm are generated and organized. | 1 | Q8BGS1 (/IMP) | 
| Paraxial mesoderm development GO:0048339 The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube. | 1 | Q8BGS1 (/IMP) | 
| Embryonic foregut morphogenesis GO:0048617 The process in which the anatomical structures of the foregut are generated and organized, during the embryonic phase. | 1 | Q8BGS1 (/IMP) | 
| Positive regulation of keratinocyte migration GO:0051549 Any process that activates or increases the frequency, rate or extent of keratinocyte migration. | 1 | Q9H329 (/IMP) | 
| Positive regulation of keratinocyte migration GO:0051549 Any process that activates or increases the frequency, rate or extent of keratinocyte migration. | 1 | Q9JMC8 (/ISO) | 
| Positive regulation of focal adhesion assembly GO:0051894 Any process that activates or increases the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions. | 1 | Q8BGS1 (/IMP) | 
| Regulation of establishment of protein localization GO:0070201 Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location. | 1 | Q8BGS1 (/IDA) | 
| Left/right axis specification GO:0070986 The establishment, maintenance and elaboration of the left/right axis. The left/right axis is defined by a line that runs orthogonal to both the anterior/posterior and dorsal/ventral axes. Each side is defined from the viewpoint of the organism rather of the observer (as per anatomical axes). | 1 | Q8BGS1 (/IMP) | 
| Cellular response to transforming growth factor beta stimulus GO:0071560 Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus. | 1 | Q8BGS1 (/IDA) | 
There are 18 GO terms relating to "cellular component"
			The search results have been sorted with the annotations that are found most frequently at the top of the
			list. The results can be filtered by typing text into the search box at the top of the table.
			
			
	| GO Term | Annotations | Evidence | 
|---|---|---|
| Zonula adherens GO:0005915 A cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells. | 4 | A0T1Z4 (/IDA) A0T1Z5 (/IDA) B7Z0J2 (/IDA) Q9VFU8 (/IDA) | 
| Septate junction GO:0005918 A cell-cell junction that forms a continuous band around each cell in an epithelium; within the septate junction the membranes of adjacent cells maintain a constant distance of approximately 15 nm; found in invertebrates. | 4 | A0T1Z4 (/IDA) A0T1Z5 (/IDA) B7Z0J2 (/IDA) Q9VFU8 (/IDA) | 
| Bicellular tight junction GO:0005923 An occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet; the outer leaflets of the two interacting plasma membranes are seen to be tightly apposed where sealing strands are present. Each sealing strand is composed of a long row of transmembrane adhesion proteins embedded in each of the two interacting plasma membranes. | 4 | F1Q9F0 (/IMP) F1QVV9 (/IMP) F6NJ58 (/IMP) Q6PNC5 (/IMP) | 
| Basolateral plasma membrane GO:0016323 The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis. | 4 | A0T1Z4 (/IDA) A0T1Z5 (/IDA) B7Z0J2 (/IDA) Q9VFU8 (/IDA) | 
| Protein complex GO:0043234 A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical. | 4 | F1Q9F0 (/IPI) F1QVV9 (/IPI) F6NJ58 (/IPI) Q6PNC5 (/IPI) | 
| Plasma membrane GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. | 3 | Q8BGS1 (/IDA) Q9H329 (/IDA) Q9HCM4 (/IDA) | 
| Plasma membrane GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. | 2 | Q8BGS1 (/ISO) Q9JMC8 (/ISO) | 
| Cytoplasm GO:0005737 All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | 1 | Q9H329 (/IDA) | 
| Cytoplasm GO:0005737 All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | 1 | Q9JMC8 (/ISO) | 
| Cytosol GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. | 1 | Q9H329 (/IDA) | 
| Cytosol GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. | 1 | Q9JMC8 (/ISO) | 
| Cytosol GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. | 1 | Q9HCM4 (/TAS) | 
| Cytoskeleton GO:0005856 Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. | 1 | Q9H329 (/TAS) | 
| Focal adhesion GO:0005925 Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. | 1 | Q8BGS1 (/IDA) | 
| Cell leading edge GO:0031252 The area of a motile cell closest to the direction of movement. | 1 | Q8BGS1 (/IDA) | 
| Ruffle membrane GO:0032587 The portion of the plasma membrane surrounding a ruffle. | 1 | Q8BGS1 (/IDA) | 
| Apical part of cell GO:0045177 The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue. | 1 | Q9H329 (/IDA) | 
| Apical part of cell GO:0045177 The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue. | 1 | Q9JMC8 (/ISO) | 
