PDB Information

PDB5OPT
MethodELECTRON MICROSCOPY
Host OrganismTrypanosoma cruzi
Gene SourceTrypanosoma cruzi (strain CL Brener)
Primary Citation
The cryo-EM Structure of a Novel 40S Kinetoplastid-Specific Ribosomal Protein.
Brito Querido, J., Mancera-Martinez, E., Vicens, Q., Bochler, A., Chicher, J., Simonetti, A., Hashem, Y.
Structure
HeaderRibosome
Released2017-08-10
Resolution4.000
CATH Insert Date17 Dec, 2017

PDB Images (70)

PDB Prints

PDB Chains (35)

Chain ID Date inserted into CATH CATH Status
a 17 Dec, 2017 Chopped
b 17 Dec, 2017 Chopped
c 17 Dec, 2017 Holding pen
d 17 Dec, 2017 Chopped
e 17 Dec, 2017 Chopped
E 17 Dec, 2017 Rejected
f 17 Dec, 2017 Chopped
g 17 Dec, 2017 Chopped
h 17 Dec, 2017 Domchop review
i 17 Dec, 2017 Chopped
j 17 Dec, 2017 Chopped
k 17 Dec, 2017 Chopped
l 17 Dec, 2017 Chopped
L 17 Dec, 2017 Chopped
m 17 Dec, 2017 Chopped
M 17 Dec, 2017 Chopped
n 17 Dec, 2017 Chopped
o 17 Dec, 2017 Domchop review
O 17 Dec, 2017 Chopped
p 17 Dec, 2017 Chopped
P 17 Dec, 2017 Domchop review
q 17 Dec, 2017 Rejected
Q 17 Dec, 2017 Chopped
r 17 Dec, 2017 Chopped
R 17 Dec, 2017 Chopped
S 17 Dec, 2017 Chopped
t 17 Dec, 2017 Chopped
T 17 Dec, 2017 Chopped
u 17 Dec, 2017 Domchop review
U 17 Dec, 2017 Chopped
V 17 Dec, 2017 Chopped
W 17 Dec, 2017 Chopped
X 17 Dec, 2017 Chopped
Y 17 Dec, 2017 Chopped
Z 17 Dec, 2017 Chopped

CATH Domains (34)

Domain ID Date inserted into CATH Superfamily CATH Status
5opta00 22 Dec, 2017 Holding pen
5optb01 22 Dec, 2017 Holding pen
5optd01 22 Dec, 2017 3.30.160.20 Assigned
5optd02 22 Dec, 2017 3.30.230.10 Assigned
5opte01 22 Dec, 2017 3.30.1370.30 Assigned
5opte02 22 Dec, 2017 3.30.1490.10 Assigned
5optf01 22 Dec, 2017 3.40.50.10490 Assigned
5optg00 22 Dec, 2017 3.30.1230.20 Assigned
5opti00 22 Dec, 2017 3.30.1330.30 Assigned
5optj00 21 Feb, 2018 Holding pen
5optk01 22 Dec, 2017 1.10.60.20 Assigned
5optl00 22 Dec, 2017 3.30.70.600 Assigned
5optL01 22 Dec, 2017 3.10.290.10 Assigned
5optL02 22 Dec, 2017 2.40.50.740 Assigned
5optL03 22 Dec, 2017 2.30.30.30 Assigned
5optM00 22 Dec, 2017 Holding pen
5optm01 22 Dec, 2017 3.30.300.20 Assigned
5optm02 22 Dec, 2017 3.30.1140.32 Assigned
5optn00 22 Dec, 2017 1.10.10.10 Assigned
5optO00 22 Dec, 2017 1.10.455.10 Assigned
5optp01 22 Dec, 2017 2.130.10.10 Assigned
5optQ00 21 Feb, 2018 Write scan list
5optr00 22 Dec, 2017 3.30.230.10 Assigned
5optR01 22 Dec, 2017 Holding pen
5optR02 22 Dec, 2017 1.10.287.10 Assigned
5optS00 22 Dec, 2017 2.20.25.100 Assigned
5optt00 22 Dec, 2017 Holding pen
5optT00 22 Dec, 2017 3.30.1740.20 Assigned
5optU00 22 Dec, 2017 2.40.50.140 Assigned
5optV00 22 Dec, 2017 3.30.420.80 Assigned
5optW01 22 Dec, 2017 Holding pen
5optX00 22 Dec, 2017 2.40.50.1000 Assigned
5optY00 22 Dec, 2017 3.30.70.3370 Assigned
5optZ01 22 Dec, 2017 Holding pen

UniProtKB Entries (31)

Accession Gene ID Taxon Description
Q4DTN2 Q4DTN2_TRYCC Trypanosoma cruzi strain CL Brener Activated protein kinase C receptor, putative
Q4DU83 Q4DU83_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S8
Q4D6I5 Q4D6I5_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S14, putative
Q4DN73 Q4DN73_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S27, putative
Q4DIZ9 Q4DIZ9_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S2, putative
Q4DSU0 Q4DSU0_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S6
Q4DGZ5 Q4DGZ5_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S15, putative
Q4CQ63 Q4CQ63_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein SA
Q4E3M0 Q4E3M0_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S21, putative
Q4E088 Q4E088_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S10, putative
Q4DTX6 Q4DTX6_TRYCC Trypanosoma cruzi strain CL Brener Ribosomal protein S25, putative
Q4DJY1 Q4DJY1_TRYCC Trypanosoma cruzi strain CL Brener Ribosomal protein S19, putative
Q4E093 Q4E093_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S18, putative
Q4DC38 Q4DC38_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S13, putative
Q4DK40 Q4DK40_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S17, putative
Q4D5P4 Q4D5P4_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S4
Q4DY32 Q4DY32_TRYCC Trypanosoma cruzi strain CL Brener RNA-binding protein, putative
Q4E0Q3 Q4E0Q3_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S5, putative
Q4D1T6 Q4D1T6_TRYCC Trypanosoma cruzi strain CL Brener Ubiquitin/ribosomal protein S27a, putative
Q4DMK9 Q4DMK9_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S3, putative
Q4E0N6 Q4E0N6_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S15a, putative
Q4CSL1 Q4CSL1_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S12
Q4DEK4 Q4DEK4_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S16, putative
Q4D7C8 Q4D7C8_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S33, putative
Q4D4S1 Q4D4S1_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S9, putative
Q4DW38 Q4DW38_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S24
Q4CYE4 Q4CYE4_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S26
Q4D0U7 Q4D0U7_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S11, putative
Q4DTQ1 Q4DTQ1_TRYCC Trypanosoma cruzi strain CL Brener 40S ribosomal protein S23, putative
Q4CXR4 Q4CXR4_TRYCC Trypanosoma cruzi strain CL Brener Ribosomal protein S29, putative
Q4D6H7 Q4D6H7_TRYCC Trypanosoma cruzi strain CL Brener Ribosomal protein S20, putative