PDB Information

PDB5BR8
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin
Sierra, R.G., Gati, C., Laksmono, H., Dao, E.H., Gul, S., Fuller, F., Kern, J., Chatterjee, R., Ibrahim, M., Brewster, A., Young, I.D., Michels-Clark, T., Aquila, A., Mengning, L., Hunter, M.S., Koglin, J.E., Boutet, S., Junco, E.A., Hayes, B., Bogan, M.J., Hampton, C.Y., Puglisi, E.V., Sauter, N.K., Stan, C.A., Zouni, A., Yano, J., Yachandra, V.K., Soltis, S.M., Puglisi, J.D., DeMirci, H.
To Be Published
HeaderRibosome
Released2015-05-29
Resolution3.400
CATH Insert Date29 Nov, 2015

PDB Images (47)

PDB Prints

PDB Chains (21)

Chain ID Date inserted into CATH CATH Status
A 30 Nov, 2015 Rejected
B 30 Nov, 2015 Chopped
C 30 Nov, 2015 Chopped
D 30 Nov, 2015 Chopped
E 30 Nov, 2015 Chopped
F 30 Nov, 2015 Chopped
G 30 Nov, 2015 Chopped
H 30 Nov, 2015 Chopped
I 30 Nov, 2015 Chopped
J 30 Nov, 2015 Chopped
K 30 Nov, 2015 Chopped
L 30 Nov, 2015 Chopped
M 30 Nov, 2015 Chopped
N 30 Nov, 2015 Chopped
O 30 Nov, 2015 Chopped
P 30 Nov, 2015 Chopped
Q 30 Nov, 2015 Chopped
R 30 Nov, 2015 Chopped
S 30 Nov, 2015 Chopped
T 30 Nov, 2015 Chopped
U 30 Nov, 2015 Rejected

CATH Domains (25)

Domain ID Date inserted into CATH Superfamily CATH Status
5br8B01 21 Dec, 2016 3.40.50.10490 Assigned
5br8B02 21 Dec, 2016 1.10.287.610 Assigned
5br8C01 03 Dec, 2015 3.30.300.20 Assigned
5br8C02 03 Dec, 2015 3.30.1140.32 Assigned
5br8D01 03 Dec, 2015 1.10.1050.10 Assigned
5br8D02 03 Dec, 2015 3.10.290.10 Assigned
5br8E01 03 Dec, 2015 3.30.160.20 Assigned
5br8E02 03 Dec, 2015 3.30.230.10 Assigned
5br8F00 03 Dec, 2015 3.30.70.60 Assigned
5br8G00 03 Dec, 2015 1.10.455.10 Assigned
5br8H01 03 Dec, 2015 3.30.1370.30 Assigned
5br8H02 03 Dec, 2015 3.30.1490.10 Assigned
5br8I00 03 Dec, 2015 3.30.230.10 Assigned
5br8J00 03 Dec, 2015 3.30.70.600 Assigned
5br8K00 20 Mar, 2016 3.30.420.80 Assigned
5br8L00 20 Mar, 2016 2.40.50.140 Assigned
5br8M01 03 Dec, 2015 1.10.8.50 Assigned
5br8M02 03 Dec, 2015 4.10.910.10 Assigned
5br8N00 03 Dec, 2015 4.10.830.10 Assigned
5br8O00 03 Dec, 2015 1.10.287.10 Assigned
5br8P00 03 Dec, 2015 3.30.1320.10 Assigned
5br8Q00 03 Dec, 2015 2.40.50.140 Assigned
5br8R00 02 Dec, 2015 4.10.640.10 Assigned
5br8S00 03 Dec, 2015 3.30.860.10 Assigned
5br8T00 03 Dec, 2015 1.20.58.110 Assigned

UniProtKB Entries (17)

Accession Gene ID Taxon Description
P80373 RS4_THET8 Thermus thermophilus HB8 30S ribosomal protein S4
Q5SHN3 RS12_THET8 Thermus thermophilus HB8 30S ribosomal protein S12
P80380 RS20_THET8 Thermus thermophilus HB8 30S ribosomal protein S20
P80374 RS9_THET8 Thermus thermophilus HB8 30S ribosomal protein S9
P80376 RS11_THET8 Thermus thermophilus HB8 30S ribosomal protein S11
Q5SHN7 RS10_THET8 Thermus thermophilus HB8 30S ribosomal protein S10
P80372 RS3_THET8 Thermus thermophilus HB8 30S ribosomal protein S3
Q5SLQ0 RS18_THET8 Thermus thermophilus HB8 30S ribosomal protein S18
P80377 RS13_THET8 Thermus thermophilus HB8 30S ribosomal protein S13
A0A0N0BLP2 RS14Z_THEAQ Thermus aquaticus 30S ribosomal protein S14 type Z
Q5SHQ5 RS5_THET8 Thermus thermophilus HB8 30S ribosomal protein S5
Q5SLP8 RS6_THET8 Thermus thermophilus HB8 30S ribosomal protein S6
P80371 RS2_THET8 Thermus thermophilus HB8 30S ribosomal protein S2
A0A0N0BLS5 RS17_THEAQ Thermus aquaticus 30S ribosomal protein S17
P17291 RS7_THET8 Thermus thermophilus HB8 30S ribosomal protein S7
Q5SHP2 RS19_THET8 Thermus thermophilus HB8 30S ribosomal protein S19
Q5SJH3 RS16_THET8 Thermus thermophilus HB8 30S ribosomal protein S16