PDB 4ji8

PDB Information

PDB4JI8
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Demirci, H., Wang, L., Murphy, F.V., Murphy, E.L., Carr, J.F., Blanchard, S.C., Jogl, G., Dahlberg, A.E., Gregory, S.T.
Rna
HeaderRibosome/Antibiotic
Released2013-03-05
Resolution3.740
CATH Insert Date10 Nov, 2013

PDB Images (47)

PDB Prints

PDB Chains (21)

Chain ID Date inserted into CATH CATH Status
A 11 Nov, 2013 Rejected
B 11 Nov, 2013 Chopped
C 11 Nov, 2013 Chopped
D 11 Nov, 2013 Chopped
E 11 Nov, 2013 Chopped
F 11 Nov, 2013 Chopped
G 11 Nov, 2013 Chopped
H 11 Nov, 2013 Chopped
I 11 Nov, 2013 Chopped
J 11 Nov, 2013 Chopped
K 11 Nov, 2013 Chopped
L 11 Nov, 2013 Chopped
M 11 Nov, 2013 Chopped
N 11 Nov, 2013 Chopped
O 11 Nov, 2013 Chopped
P 11 Nov, 2013 Chopped
Q 11 Nov, 2013 Chopped
R 11 Nov, 2013 Chopped
S 11 Nov, 2013 Chopped
T 11 Nov, 2013 Chopped
U 11 Nov, 2013 Rejected

CATH Domains (25)

Domain ID Date inserted into CATH Superfamily CATH Status
4ji8B01 13 Nov, 2013 3.40.50.10490 Assigned
4ji8B02 13 Nov, 2013 1.10.287.610 Assigned
4ji8C01 13 Nov, 2013 3.30.300.20 Assigned
4ji8C02 13 Nov, 2013 3.30.1140.32 Assigned
4ji8D01 13 Nov, 2013 1.10.1050.10 Assigned
4ji8D02 13 Nov, 2013 3.10.290.10 Assigned
4ji8E01 13 Nov, 2013 3.30.160.20 Assigned
4ji8E02 13 Nov, 2013 3.30.230.10 Assigned
4ji8F00 13 Nov, 2013 3.30.70.60 Assigned
4ji8G00 13 Nov, 2013 1.10.455.10 Assigned
4ji8H01 13 Nov, 2013 3.30.1370.30 Assigned
4ji8H02 13 Nov, 2013 3.30.1490.10 Assigned
4ji8I00 13 Nov, 2013 3.30.230.10 Assigned
4ji8J00 13 Nov, 2013 3.30.70.600 Assigned
4ji8K00 13 Nov, 2013 3.30.420.80 Assigned
4ji8L00 13 Nov, 2013 2.40.50.140 Assigned
4ji8M01 13 Nov, 2013 1.10.8.50 Assigned
4ji8M02 13 Nov, 2013 4.10.910.10 Assigned
4ji8N00 13 Nov, 2013 4.10.830.10 Assigned
4ji8O00 13 Nov, 2013 1.10.287.10 Assigned
4ji8P00 13 Nov, 2013 3.30.1320.10 Assigned
4ji8Q00 13 Nov, 2013 2.40.50.140 Assigned
4ji8R00 13 Nov, 2013 4.10.640.10 Assigned
4ji8S00 13 Nov, 2013 3.30.860.10 Assigned
4ji8T00 13 Nov, 2013 1.20.58.110 Assigned

UniProtKB Entries (19)

Accession Gene ID Taxon Description
P80374 RS9_THET8 Thermus thermophilus HB8 30S ribosomal protein S9
Q5SJH3 RS16_THET8 Thermus thermophilus HB8 30S ribosomal protein S16
Q5SHQ5 RS5_THET8 Thermus thermophilus HB8 30S ribosomal protein S5
P80371 RS2_THET8 Thermus thermophilus HB8 30S ribosomal protein S2
P80380 RS20_THET8 Thermus thermophilus HB8 30S ribosomal protein S20
P17291 RS7_THET8 Thermus thermophilus HB8 30S ribosomal protein S7
A0A0N0BLP2 RS14Z_THEAQ Thermus aquaticus 30S ribosomal protein S14 type Z
Q5SHN7 RS10_THET8 Thermus thermophilus HB8 30S ribosomal protein S10
P80372 RS3_THET8 Thermus thermophilus HB8 30S ribosomal protein S3
Q5SHP2 RS19_THET8 Thermus thermophilus HB8 30S ribosomal protein S19
P80373 RS4_THET8 Thermus thermophilus HB8 30S ribosomal protein S4
Q5SLQ0 RS18_THET8 Thermus thermophilus HB8 30S ribosomal protein S18
P80376 RS11_THET8 Thermus thermophilus HB8 30S ribosomal protein S11
Q5SJ76 RS15_THET8 Thermus thermophilus HB8 30S ribosomal protein S15
A0A0N0BLS5 RS17_THEAQ Thermus aquaticus 30S ribosomal protein S17
P0DOY9 RS8_THET8 Thermus thermophilus HB8 30S ribosomal protein S8
Q5SLP8 RS6_THET8 Thermus thermophilus HB8 30S ribosomal protein S6
P80377 RS13_THET8 Thermus thermophilus HB8 30S ribosomal protein S13
Q5SHN3 RS12_THET8 Thermus thermophilus HB8 30S ribosomal protein S12