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PDB Information
| PDB | 4DR4 |
| Method | X-RAY DIFFRACTION |
| Host Organism | |
| Gene Source | |
| Primary Citation |
A structural basis for streptomycin-induced misreading of the genetic code.
Demirci, H., Murphy, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
Nat Commun
|
| Header | Ribosome/Antibiotic |
| Released | 2012-02-16 |
| Resolution | 3.970 |
| CATH Insert Date | 18 Nov, 2012 |
PDB Images (49)
4dr4B01
CATH Domain 4dr4B01
4dr4B02
CATH Domain 4dr4B02
4dr4C01
CATH Domain 4dr4C01
4dr4C02
CATH Domain 4dr4C02
4dr4D01
CATH Domain 4dr4D01
4dr4D02
CATH Domain 4dr4D02
4dr4E01
CATH Domain 4dr4E01
4dr4E02
CATH Domain 4dr4E02
4dr4F00
CATH Domain 4dr4F00
4dr4G00
CATH Domain 4dr4G00
4dr4H01
CATH Domain 4dr4H01
4dr4H02
CATH Domain 4dr4H02
4dr4I00
CATH Domain 4dr4I00
4dr4J00
CATH Domain 4dr4J00
4dr4K00
CATH Domain 4dr4K00
4dr4L00
CATH Domain 4dr4L00
4dr4M01
CATH Domain 4dr4M01
4dr4M02
CATH Domain 4dr4M02
4dr4N00
CATH Domain 4dr4N00
4dr4O00
CATH Domain 4dr4O00
4dr4P00
CATH Domain 4dr4P00
4dr4Q00
CATH Domain 4dr4Q00
4dr4R00
CATH Domain 4dr4R00
4dr4S00
CATH Domain 4dr4S00
4dr4T00
CATH Domain 4dr4T00
PDB Chains (23)
| Chain ID | Date inserted into CATH | CATH Status |
| A | 19 Nov, 2012 | Rejected
|
| B | 19 Nov, 2012 | Chopped
|
| C | 19 Nov, 2012 | Chopped
|
| D | 19 Nov, 2012 | Chopped
|
| E | 19 Nov, 2012 | Chopped
|
| F | 19 Nov, 2012 | Chopped
|
| G | 19 Nov, 2012 | Chopped
|
| H | 19 Nov, 2012 | Chopped
|
| I | 19 Nov, 2012 | Chopped
|
| J | 19 Nov, 2012 | Chopped
|
| K | 19 Nov, 2012 | Chopped
|
| L | 19 Nov, 2012 | Chopped
|
| M | 19 Nov, 2012 | Chopped
|
| N | 19 Nov, 2012 | Chopped
|
| O | 19 Nov, 2012 | Chopped
|
| P | 19 Nov, 2012 | Chopped
|
| Q | 19 Nov, 2012 | Chopped
|
| R | 19 Nov, 2012 | Chopped
|
| S | 19 Nov, 2012 | Chopped
|
| T | 19 Nov, 2012 | Chopped
|
| U | 19 Nov, 2012 | Rejected
|
| V | 19 Nov, 2012 | Rejected
|
| W | 19 Nov, 2012 | Rejected
|
CATH Domains (25)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
| 4dr4B01 | 03 Jan, 2013 | 3.40.50.10490 | Assigned
|
| 4dr4B02 | 03 Jan, 2013 | 1.10.287.610 | Assigned
|
| 4dr4C01 | 03 Jan, 2013 | 3.30.300.20 | Assigned
|
| 4dr4C02 | 03 Jan, 2013 | 3.30.1140.32 | Assigned
|
| 4dr4D01 | 03 Jan, 2013 | 1.10.1050.10 | Assigned
|
| 4dr4D02 | 03 Jan, 2013 | 3.10.290.10 | Assigned
|
| 4dr4E01 | 03 Jan, 2013 | 3.30.160.20 | Assigned
|
| 4dr4E02 | 03 Jan, 2013 | 3.30.230.10 | Assigned
|
| 4dr4F00 | 03 Jan, 2013 | 3.30.70.60 | Assigned
|
| 4dr4G00 | 03 Jan, 2013 | 1.10.455.10 | Assigned
|
| 4dr4H01 | 08 Feb, 2013 | 3.30.1370.30 | Assigned
|
| 4dr4H02 | 08 Feb, 2013 | 3.30.1490.10 | Assigned
|
| 4dr4I00 | 03 Jan, 2013 | 3.30.230.10 | Assigned
|
| 4dr4J00 | 03 Jan, 2013 | 3.30.70.600 | Assigned
|
| 4dr4K00 | 03 Jan, 2013 | 3.30.420.80 | Assigned
|
| 4dr4L00 | 03 Jan, 2013 | 2.40.50.140 | Assigned
|
| 4dr4M01 | 02 Jan, 2013 | 1.10.8.50 | Assigned
|
| 4dr4M02 | 02 Jan, 2013 | 4.10.910.10 | Assigned
|
| 4dr4N00 | 02 Jan, 2013 | 4.10.830.10 | Assigned
|
| 4dr4O00 | 08 Feb, 2013 | 1.10.287.10 | Assigned
|
| 4dr4P00 | 08 Feb, 2013 | 3.30.1320.10 | Assigned
|
| 4dr4Q00 | 08 Feb, 2013 | 2.40.50.140 | Assigned
|
| 4dr4R00 | 02 Jan, 2013 | 4.10.640.10 | Assigned
|
| 4dr4S00 | 02 Jan, 2013 | 3.30.860.10 | Assigned
|
| 4dr4T00 | 02 Jan, 2013 | 1.20.58.110 | Assigned
|
UniProtKB Entries (19)
| Accession |
Gene ID |
Taxon |
Description |
| Q5SJH3 |
RS16_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S16 |
| Q5SHQ5 |
RS5_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S5 |
| Q5SHP2 |
RS19_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S19 |
| A0A0N0BLS5 |
RS17_THEAQ |
Thermus aquaticus |
30S ribosomal protein S17 |
| P80372 |
RS3_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S3 |
| P80377 |
RS13_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S13 |
| P80374 |
RS9_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S9 |
| P80376 |
RS11_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S11 |
| Q5SJ76 |
RS15_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S15 |
| P80373 |
RS4_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S4 |
| Q5SLP8 |
RS6_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S6 |
| A0A0N0BLP2 |
RS14Z_THEAQ |
Thermus aquaticus |
30S ribosomal protein S14 type Z |
| F6DEQ7 |
F6DEQ7_THETG |
Thermus thermophilus SG0.5JP17-16 |
30S ribosomal protein S12 |
| P0DOY9 |
RS8_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S8 |
| Q5SLQ0 |
RS18_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S18 |
| P80380 |
RS20_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S20 |
| P17291 |
RS7_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S7 |
| Q5SHN7 |
RS10_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S10 |
| P80371 |
RS2_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S2 |