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PDB Information
| PDB | 4DR3 |
| Method | X-RAY DIFFRACTION |
| Host Organism | |
| Gene Source | |
| Primary Citation |
A structural basis for streptomycin-induced misreading of the genetic code.
Demirci, H., Murphy, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
Nat Commun
|
| Header | Ribosome/Antibiotic |
| Released | 2012-02-16 |
| Resolution | 3.350 |
| CATH Insert Date | 18 Nov, 2012 |
PDB Images (47)
4dr3B01
CATH Domain 4dr3B01
4dr3B02
CATH Domain 4dr3B02
4dr3C01
CATH Domain 4dr3C01
4dr3C02
CATH Domain 4dr3C02
4dr3D01
CATH Domain 4dr3D01
4dr3D02
CATH Domain 4dr3D02
4dr3E01
CATH Domain 4dr3E01
4dr3E02
CATH Domain 4dr3E02
4dr3F00
CATH Domain 4dr3F00
4dr3G00
CATH Domain 4dr3G00
4dr3H01
CATH Domain 4dr3H01
4dr3H02
CATH Domain 4dr3H02
4dr3I00
CATH Domain 4dr3I00
4dr3J00
CATH Domain 4dr3J00
4dr3K00
CATH Domain 4dr3K00
4dr3L00
CATH Domain 4dr3L00
4dr3M01
CATH Domain 4dr3M01
4dr3M02
CATH Domain 4dr3M02
4dr3N00
CATH Domain 4dr3N00
4dr3O00
CATH Domain 4dr3O00
4dr3P00
CATH Domain 4dr3P00
4dr3Q00
CATH Domain 4dr3Q00
4dr3R00
CATH Domain 4dr3R00
4dr3S00
CATH Domain 4dr3S00
4dr3T00
CATH Domain 4dr3T00
PDB Chains (21)
| Chain ID | Date inserted into CATH | CATH Status |
| A | 19 Nov, 2012 | Rejected
|
| B | 19 Nov, 2012 | Chopped
|
| C | 19 Nov, 2012 | Chopped
|
| D | 19 Nov, 2012 | Chopped
|
| E | 19 Nov, 2012 | Chopped
|
| F | 19 Nov, 2012 | Chopped
|
| G | 19 Nov, 2012 | Chopped
|
| H | 19 Nov, 2012 | Chopped
|
| I | 19 Nov, 2012 | Chopped
|
| J | 19 Nov, 2012 | Chopped
|
| K | 19 Nov, 2012 | Chopped
|
| L | 19 Nov, 2012 | Chopped
|
| M | 19 Nov, 2012 | Chopped
|
| N | 19 Nov, 2012 | Chopped
|
| O | 19 Nov, 2012 | Chopped
|
| P | 19 Nov, 2012 | Chopped
|
| Q | 19 Nov, 2012 | Chopped
|
| R | 19 Nov, 2012 | Chopped
|
| S | 19 Nov, 2012 | Chopped
|
| T | 19 Nov, 2012 | Chopped
|
| U | 19 Nov, 2012 | Rejected
|
CATH Domains (25)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
| 4dr3B01 | 03 Jan, 2013 | 3.40.50.10490 | Assigned
|
| 4dr3B02 | 03 Jan, 2013 | 1.10.287.610 | Assigned
|
| 4dr3C01 | 03 Jan, 2013 | 3.30.300.20 | Assigned
|
| 4dr3C02 | 03 Jan, 2013 | 3.30.1140.32 | Assigned
|
| 4dr3D01 | 03 Jan, 2013 | 1.10.1050.10 | Assigned
|
| 4dr3D02 | 03 Jan, 2013 | 3.10.290.10 | Assigned
|
| 4dr3E01 | 03 Jan, 2013 | 3.30.160.20 | Assigned
|
| 4dr3E02 | 03 Jan, 2013 | 3.30.230.10 | Assigned
|
| 4dr3F00 | 03 Jan, 2013 | 3.30.70.60 | Assigned
|
| 4dr3G00 | 03 Jan, 2013 | 1.10.455.10 | Assigned
|
| 4dr3H01 | 08 Feb, 2013 | 3.30.1370.30 | Assigned
|
| 4dr3H02 | 08 Feb, 2013 | 3.30.1490.10 | Assigned
|
| 4dr3I00 | 03 Jan, 2013 | 3.30.230.10 | Assigned
|
| 4dr3J00 | 03 Jan, 2013 | 3.30.70.600 | Assigned
|
| 4dr3K00 | 03 Jan, 2013 | 3.30.420.80 | Assigned
|
| 4dr3L00 | 03 Jan, 2013 | 2.40.50.140 | Assigned
|
| 4dr3M01 | 03 Jan, 2013 | 1.10.8.50 | Assigned
|
| 4dr3M02 | 03 Jan, 2013 | 4.10.910.10 | Assigned
|
| 4dr3N00 | 03 Jan, 2013 | 4.10.830.10 | Assigned
|
| 4dr3O00 | 08 Feb, 2013 | 1.10.287.10 | Assigned
|
| 4dr3P00 | 08 Feb, 2013 | 3.30.1320.10 | Assigned
|
| 4dr3Q00 | 08 Feb, 2013 | 2.40.50.140 | Assigned
|
| 4dr3R00 | 03 Jan, 2013 | 4.10.640.10 | Assigned
|
| 4dr3S00 | 03 Jan, 2013 | 3.30.860.10 | Assigned
|
| 4dr3T00 | 03 Jan, 2013 | 1.20.58.110 | Assigned
|
UniProtKB Entries (19)
| Accession |
Gene ID |
Taxon |
Description |
| P80371 |
RS2_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S2 |
| P80374 |
RS9_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S9 |
| F6DEQ7 |
F6DEQ7_THETG |
Thermus thermophilus SG0.5JP17-16 |
30S ribosomal protein S12 |
| A0A0N0BLS5 |
RS17_THEAQ |
Thermus aquaticus |
30S ribosomal protein S17 |
| P17291 |
RS7_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S7 |
| Q5SHQ5 |
RS5_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S5 |
| P80373 |
RS4_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S4 |
| Q5SLP8 |
RS6_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S6 |
| Q5SJH3 |
RS16_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S16 |
| P80372 |
RS3_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S3 |
| A0A0N0BLP2 |
RS14Z_THEAQ |
Thermus aquaticus |
30S ribosomal protein S14 type Z |
| Q5SJ76 |
RS15_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S15 |
| Q5SHP2 |
RS19_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S19 |
| Q5SLQ0 |
RS18_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S18 |
| P80377 |
RS13_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S13 |
| P80380 |
RS20_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S20 |
| P0DOY9 |
RS8_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S8 |
| Q5SHN7 |
RS10_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S10 |
| P80376 |
RS11_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S11 |