CATH Domain: 1ca1A02 XML data for domain: 1ca1A02

Molscript image for 1ca1A02
1ca1A02
PDB coordinates for domain 1ca1A02

PDB 1ca1, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.60 Lipoxygenase-1
2.60.60.20 Lipoxygenase-1 Gene3D
2.60.60.20.2
2.60.60.20.2.1
2.60.60.20.2.1.1
2.60.60.20.2.1.1.2
2.60.60.20.2.1.1.2.1

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Segment boundaries for domain 1ca1A02

Chopping figure for domain 1ca1A02
DomainStart PDB ResidueStop PDB Residue
1ca1A01 1 250
1ca1A02 251 370

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.60.60.20.2.1.1.2.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1loxA02 84.76 Arachidonate 15-lipoxygenaseOryctolagus cuniculus 2.60.60.20 111 11 89 2.39 2.68
1bu8A02 81.89 Response to foodRattus norvegicusTriglyceride lipase activityZymogen granule membraneResponse to peptide hormone stimulus 2.60.60.20 106 10 85 2.85 3.32
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ca1A02
VGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWEMDNPGNDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRK
YTAFPDAYKPENIKVIANGKVVVDKDINEWISGNSTYNIK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ca1A02
VGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWEMDNPGNDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRK
YTAFPDAYKPENIKVIANGKVVVDKDINEWISGNSTYNIK
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1ca1002" to "1ca1A02" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:15

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"