CATH Domain 3h41A03

Level	CATH Code	Description
	3	Alpha Beta
	3.90	Alpha-Beta Complex
	3.90.1720	endopeptidase fold (from Nostoc punctiforme)
	3.90.1720.10	endopeptidase domain like (from Nostoc punctiforme)

Superfamily	endopeptidase domain like (from Nostoc punctiforme)
Functional Family

3.4.14.13

Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase.

based on mapping to UniProt Q736M3

The enzyme releases L-Ala-gamma-D-Glu dipeptides from cell wall peptides via cleavage of an L-Ala-gamma-D-Glu-|-L-Lys bond.

-!- The enzyme, characterized from the bacterium Bacillus subtilis, is involved in the recycling of the murein peptide.

YKFC_BACC1

Bacillus cereus ATCC 10987

Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase

PDB	3H41
External Links	PDBSum Proteopedia
Method	X-RAY DIFFRACTION
Organism
Primary Citation	Structure of the gamma-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-[gamma]-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases Xu, Q., Abdubek, P., Astakhova, T., Axelrod, H.L., Bakolitsa, C., Cai, X., Carlton, D., Chen, C., Chiu, H.J., Chiu, M., Clayton, T., Das, D., Deller, M.C., Duan, L., Ellrott, K., Farr, C.L., Feuerhelm, J., Grant, J.C., Grzechnik, A., Han, G.W., Jaroszewski, L., Jin, K.K., Klock, H.E., Knuth, M.W., Kozbial, P., Krishna, S.S., Kumar, A., Lam, W.W., Marciano, D., Miller, M.D., Morse, A.T., Nigoghossian, E., Nopakun, A., Okach, L., Puckett, C., Reyes, R., Tien, H.J., Trame, C.B., van den Bedem, H., Weekes, D., Wooten, T., Yeh, A., Hodgson, K.O., Wooley, J., Elsliger, M.A., Deacon, A.M., Godzik, A., Lesley, S.A., Wilson, I.A. Acta Crystallogr.,Sect.F