The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"P-loop containing nucleotide triphosphate hydrolases
".
FunFam 333: Dynein cytoplasmic 1 light intermediate chain 2
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 7 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
3 | Q6PDL0 (/IPI) Q9Y6G9 (/IPI) Q9Y6G9 (/IPI) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
2 | Q9Y6G9 (/HDA) Q9Y6G9 (/HDA) |
Microtubule motor activity GO:0003777
Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
|
2 | Q8R1Q8 (/ISS) Q8R1Q8 (/ISS) |
GDP binding GO:0019003
Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.
|
2 | Q9Y6G9 (/IDA) Q9Y6G9 (/IDA) |
GDP binding GO:0019003
Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.
|
2 | Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Dynein heavy chain binding GO:0045504
Interacting selectively and non-covalently with a heavy chain of the dynein complex.
|
2 | Q9Y6G9 (/IPI) Q9Y6G9 (/IPI) |
Dynein heavy chain binding GO:0045504
Interacting selectively and non-covalently with a heavy chain of the dynein complex.
|
2 | Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
There are 19 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
|
12 |
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
(2 more) |
Antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0019886
The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.
|
12 |
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
(2 more) |
Regulation of mitotic cell cycle, embryonic GO:0009794
Any process that modulates the frequency, rate or extent of replication and segregation of genetic material in the embryo.
|
10 | A0A0R4ICI6 (/IMP) A0A2R8QJJ3 (/IMP) A0A2R8QU45 (/IMP) A1L1S7 (/IMP) A6H8Q6 (/IMP) A8KBW4 (/IMP) F1RB89 (/IMP) Q1LUM9 (/IMP) Q1LUN0 (/IMP) Q561T1 (/IMP) |
Regulation of mitotic spindle organization GO:0060236
Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
|
10 | A0A0R4ICI6 (/IMP) A0A2R8QJJ3 (/IMP) A0A2R8QU45 (/IMP) A1L1S7 (/IMP) A6H8Q6 (/IMP) A8KBW4 (/IMP) F1RB89 (/IMP) Q1LUM9 (/IMP) Q1LUN0 (/IMP) Q561T1 (/IMP) |
Regulation of metaphase plate congression GO:0090235
Any process that modulates the rate, frequency, or extent of metaphase plate congression, the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.
|
4 | A0A2R8QJJ3 (/IMP) A8KBW4 (/IMP) F1RB89 (/IMP) Q561T1 (/IMP) |
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
3 | Q6PDL0 (/ISO) Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Positive regulation of mitotic cell cycle spindle assembly checkpoint GO:0090267
Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.
|
3 | Q8R1Q8 (/ISS) Q8R1Q8 (/ISS) Q9QXU8 (/ISS) |
Cellular response to nerve growth factor stimulus GO:1990090
A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.
|
3 | Q6PDL0 (/ISO) Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Microtubule-based movement GO:0007018
A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
|
2 | Q8R1Q8 (/ISS) Q8R1Q8 (/ISS) |
Neutrophil degranulation GO:0043312
The regulated exocytosis of secretory granules containing preformed mediators such as proteases, lipases, and inflammatory mediators by a neutrophil.
|
2 | Q9Y6G9 (/TAS) Q9Y6G9 (/TAS) |
Regulation of centrosome cycle GO:0046605
Any process that modulates the frequency, rate or extent of the centrosome cycle, the processes of centrosome duplication and separation.
|
2 | Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
2 | Q62698 (/IDA) Q9QXU8 (/IDA) |
Positive regulation of mitotic cell cycle spindle assembly checkpoint GO:0090267
Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.
|
2 | Q9Y6G9 (/IMP) Q9Y6G9 (/IMP) |
Positive regulation of mitotic cell cycle spindle assembly checkpoint GO:0090267
Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.
|
2 | Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Cellular response to nerve growth factor stimulus GO:1990090
A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.
|
2 | Q62698 (/IDA) Q9QXU8 (/IDA) |
Microtubule cytoskeleton organization GO:0000226
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
|
1 | Q6PDL0 (/IMP) |
Mitotic spindle organization GO:0007052
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
|
1 | Q9QXU8 (/TAS) |
Regulation of centrosome cycle GO:0046605
Any process that modulates the frequency, rate or extent of the centrosome cycle, the processes of centrosome duplication and separation.
|
1 | Q9QXU8 (/IDA) |
Centrosome localization GO:0051642
Any process in which a centrosome is transported to, and/or maintained in, a specific location within the cell.
|
1 | Q6PDL0 (/IMP) |
There are 17 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
|
14 |
O43237 (/IDA)
O43237 (/IDA)
O43237 (/IDA)
O43237 (/IDA)
O43237 (/IDA)
O43237 (/IDA)
O43237 (/IDA)
O43237 (/IDA)
O43237 (/IDA)
O43237 (/IDA)
(4 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
12 |
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
O43237 (/TAS)
(2 more) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
12 |
O43237 (/HDA)
O43237 (/HDA)
O43237 (/HDA)
O43237 (/HDA)
O43237 (/HDA)
O43237 (/HDA)
O43237 (/HDA)
O43237 (/HDA)
O43237 (/HDA)
O43237 (/HDA)
(2 more) |
Cytoplasmic dynein complex GO:0005868
Any dynein complex with a homodimeric dynein heavy chain core that catalyzes movement along a microtubule. Cytoplasmic dynein complexes participate in many cytoplasmic transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Some complexes participate in intraflagellar transport. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes, and may include light chains and light intermediate chains.
|
10 | O43237 (/TAS) O43237 (/TAS) O43237 (/TAS) O43237 (/TAS) O43237 (/TAS) O43237 (/TAS) O43237 (/TAS) O43237 (/TAS) O43237 (/TAS) O43237 (/TAS) |
Kinetochore GO:0000776
A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
|
4 | Q62698 (/IDA) Q9QXU8 (/IDA) Q9Y6G9 (/IDA) Q9Y6G9 (/IDA) |
Kinetochore GO:0000776
A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
|
3 | Q6PDL0 (/ISO) Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Kinetochore GO:0000776
A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
|
3 | Q8R1Q8 (/ISS) Q8R1Q8 (/ISS) Q9QXU8 (/ISS) |
Spindle pole GO:0000922
Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
|
3 | Q8R1Q8 (/ISS) Q8R1Q8 (/ISS) Q9QXU8 (/ISS) |
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
|
3 | Q6PDL0 (/ISO) Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Cytoplasmic dynein complex GO:0005868
Any dynein complex with a homodimeric dynein heavy chain core that catalyzes movement along a microtubule. Cytoplasmic dynein complexes participate in many cytoplasmic transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Some complexes participate in intraflagellar transport. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes, and may include light chains and light intermediate chains.
|
3 | Q8R1Q8 (/ISS) Q8R1Q8 (/ISS) Q9QXU8 (/ISS) |
Spindle pole GO:0000922
Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
|
2 | Q9Y6G9 (/IDA) Q9Y6G9 (/IDA) |
Spindle pole GO:0000922
Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
|
2 | Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Cytoplasmic dynein complex GO:0005868
Any dynein complex with a homodimeric dynein heavy chain core that catalyzes movement along a microtubule. Cytoplasmic dynein complexes participate in many cytoplasmic transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Some complexes participate in intraflagellar transport. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes, and may include light chains and light intermediate chains.
|
2 | Q9Y6G9 (/IDA) Q9Y6G9 (/IDA) |
Cytoplasmic dynein complex GO:0005868
Any dynein complex with a homodimeric dynein heavy chain core that catalyzes movement along a microtubule. Cytoplasmic dynein complexes participate in many cytoplasmic transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Some complexes participate in intraflagellar transport. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes, and may include light chains and light intermediate chains.
|
2 | Q8R1Q8 (/ISO) Q8R1Q8 (/ISO) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
2 | Q9Y6G9 (/TAS) Q9Y6G9 (/TAS) |
Secretory granule membrane GO:0030667
The lipid bilayer surrounding a secretory granule.
|
2 | Q9Y6G9 (/TAS) Q9Y6G9 (/TAS) |
Ficolin-1-rich granule membrane GO:0101003
The lipid bilayer surrounding a ficolin-1-rich granule.
|
2 | Q9Y6G9 (/TAS) Q9Y6G9 (/TAS) |