The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Zinc/RING finger domain, C3HC4 (zinc finger)
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 118: Putative polycomb group RING finger protein 5

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 1 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
9 Q3UK78 (/IPI) Q86SE9 (/IPI) Q86SE9 (/IPI) Q86SE9 (/IPI) Q86SE9 (/IPI) Q86SE9 (/IPI) Q86SE9 (/IPI) Q86SE9 (/IPI) Q86SE9 (/IPI)

There are 6 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Histone H2A-K119 monoubiquitination GO:0036353
The modification of histone H2A by addition of a single ubiquitin group to lysine-119 (H2A- K119) in metazoans, and at the equivalent residue in other organisms.
9 A0JN86 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS)
Inactivation of X chromosome by genetic imprinting GO:0060819
Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by genetic imprinting.
9 A0JN86 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS) Q86SE9 (/ISS)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
8 Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA)
Histone H2A-K119 monoubiquitination GO:0036353
The modification of histone H2A by addition of a single ubiquitin group to lysine-119 (H2A- K119) in metazoans, and at the equivalent residue in other organisms.
1 Q3UK78 (/IMP)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
1 Q3UK78 (/ISO)
Inactivation of X chromosome by genetic imprinting GO:0060819
Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by genetic imprinting.
1 Q3UK78 (/IMP)

There are 9 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
PcG protein complex GO:0031519
A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure.
9 Q3UK78 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
8 Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
8 Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA)
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
8 Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA) Q86SE9 (/IDA)
PcG protein complex GO:0031519
A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure.
4 A0JN86 (/ISS) B3DK16 (/ISS) Q1JPS1 (/ISS) Q3UK78 (/ISS)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q3UK78 (/ISO)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
1 Q3UK78 (/ISO)
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
1 Q3UK78 (/ISO)
PcG protein complex GO:0031519
A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure.
1 Q3UK78 (/ISO)