The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 4: MHC class II H2-M beta 2 chain

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
20 B7ZNR3 (/IPI) B7ZNR4 (/IPI) P28068 (/IPI) P28068 (/IPI) P70238 (/IPI) P70239 (/IPI) P70240 (/IPI) P70241 (/IPI) P70679 (/IPI) Q31098 (/IPI)
(10 more)
MHC class II protein complex binding GO:0023026
Interacting selectively and non-covalently with the class II major histocompatibility complex.
19 B7ZNR3 (/ISO) B7ZNR4 (/ISO) P35737 (/ISO) P70238 (/ISO) P70239 (/ISO) P70240 (/ISO) P70241 (/ISO) P70679 (/ISO) Q31098 (/ISO) Q31099 (/ISO)
(9 more)
MHC class II protein complex binding GO:0023026
Interacting selectively and non-covalently with the class II major histocompatibility complex.
2 P28068 (/IDA) P28068 (/IDA)

There are 10 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Antigen processing and presentation GO:0019882
The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
19 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P35737 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA)
(9 more)
Antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0019886
The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.
19 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P35737 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA)
(9 more)
Chaperone cofactor-dependent protein refolding GO:0051085
The process of assisting in the correct posttranslational noncovalent assembly of proteins, which is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release.
19 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P35737 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA)
(9 more)
Antigen processing and presentation GO:0019882
The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
18 B7ZNR3 (/ISA) B7ZNR4 (/ISA) P70238 (/ISA) P70239 (/ISA) P70240 (/ISA) P70241 (/ISA) P70679 (/ISA) Q31098 (/ISA) Q31099 (/ISA) Q31099 (/ISA)
(8 more)
MHC class II protein complex assembly GO:0002399
The aggregation, arrangement and bonding together of a set of components to form an MHC class II protein complex.
2 P28068 (/IMP) P28068 (/IMP)
Peptide antigen assembly with MHC class II protein complex GO:0002503
The binding of a peptide to the antigen binding groove of an MHC class II protein complex.
2 P28068 (/IDA) P28068 (/IDA)
Antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0019886
The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.
2 P28068 (/IMP) P28068 (/IMP)
Antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0019886
The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.
2 P28068 (/TAS) P28068 (/TAS)
Positive regulation of T cell proliferation GO:0042102
Any process that activates or increases the rate or extent of T cell proliferation.
2 P28068 (/IMP) P28068 (/IMP)
Positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell GO:2001190
Any process that activates or increases the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.
2 P28068 (/IMP) P28068 (/IMP)

There are 9 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
MHC class II protein complex GO:0042613
A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen.
19 B7ZNR3 (/ISO) B7ZNR4 (/ISO) P35737 (/ISO) P70238 (/ISO) P70239 (/ISO) P70240 (/ISO) P70241 (/ISO) P70679 (/ISO) Q31098 (/ISO) Q31099 (/ISO)
(9 more)
Lysosome GO:0005764
A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
18 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA) Q31099 (/IDA)
(8 more)
Lysosomal membrane GO:0005765
The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
18 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA) Q31099 (/IDA)
(8 more)
Late endosome GO:0005770
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
18 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA) Q31099 (/IDA)
(8 more)
Multivesicular body GO:0005771
A type of endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.
18 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA) Q31099 (/IDA)
(8 more)
Endosome membrane GO:0010008
The lipid bilayer surrounding an endosome.
18 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA) Q31099 (/IDA)
(8 more)
Integral component of membrane GO:0016021
The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
18 B7ZNR3 (/IDA) B7ZNR4 (/IDA) P70238 (/IDA) P70239 (/IDA) P70240 (/IDA) P70241 (/IDA) P70679 (/IDA) Q31098 (/IDA) Q31099 (/IDA) Q31099 (/IDA)
(8 more)
Lysosomal membrane GO:0005765
The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
2 P28068 (/TAS) P28068 (/TAS)
MHC class II protein complex GO:0042613
A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen.
2 P28068 (/IDA) P28068 (/IDA)