View in Gene3D

CATH Superfamily 1.25.40.10

Tetratricopeptide repeat domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Tetratricopeptide repeat domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 33: Lipopolysaccharide assembly protein B

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 1 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Metal ion binding GO:0046872
Interacting selectively and non-covalently with any metal ion.
 115 P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA)
(105 more)

There are 1 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Lipopolysaccharide metabolic process GO:0008653
The chemical reactions and pathways involving lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.
 115 P0AB58 (/IPI) P0AB58 (/IPI) P0AB58 (/IPI) P0AB58 (/IPI) P0AB58 (/IPI) P0AB58 (/IPI) P0AB58 (/IPI) P0AB58 (/IPI) P0AB58 (/IPI) P0AB58 (/IPI)
(105 more)

There are 2 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
 115 P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA)
(105 more)
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
 115 P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA) P0AB58 (/IDA)
(105 more)