CATH Superfamily 2.40.50.100

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	50S ribosomal protein L27	1243		-	-	73.2
2	Efflux transporter periplasmic adaptor subunit	1194	3D	2f1mD02	-	99.2
3	Acetyl-CoA carboxylase biotin carboxyl carrier protein	1035	3D	3bg3A05	-	98.6
4	50S ribosomal protein L27	759		-	-	76.2
5	Acetyl-CoA carboxylase 1	735	3D	2kccA00	-	90.0
8	V-type proton ATPase catalytic subunit A	653	3D	5x09A02	-	97.9
6	DNA-directed RNA polymerase subunit beta	640	3D	4mexC06	-	89.1
7	Cytochrome f	638	3D	1q90A02	-	91.7
9	Acetyltransferase component of pyruvate dehydrogenase complex	483	3D	2k7vA00	-	91.7
10	Acetyltransferase component of pyruvate dehydrogenase complex	449	3D	3crlD00	-	99.3
11	Glycine cleavage system H protein	402	3D	3ab9A00	-	83.2
12	DNA-directed RNA polymerase subunit beta	375	3D	2lmcB00	-	54.1
14	Maltose/maltodextrin import ATP-binding protein MalK	335	3D	3gd7D02	-	58.0
13	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	322	3D	1k8oA00	-	94.2
15	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	288	3D	1pmrA00	-	42.5
16	DNA-directed RNA polymerase subunit beta	275	3D	4iqzE02	-	60.3
17	Spermidine/putrescine import ATP-binding protein PotA	264		-	-	48.9
19	DNA-directed RNA polymerase subunit beta	251	3D	4iqzE01	-	56.3
18	p-hydroxybenzoic acid efflux pump subunit AaeA	249		-	-	23.6
20	50S ribosomal protein L27	237		-	-	84.9
21	DNA-binding transcriptional regulator ModE	235	3D	1b9nA02	-	31.0
22	Exosome complex component RRP4	191	3D	6h25H01	-	84.4
23	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	174		-	-	77.0
24	Exosome complex component CSL4	170	3D	2nn6I01	-	96.2
27	DNA-binding transcriptional regulator ModE	159	3D	1o7lD03	-	12.9
25	UPF0194 membrane protein YbhG	157		-	-	82.2
26	50S ribosomal protein L27	155		-	-	76.5
28	Sugar ABC transporter, ATP-binding protein	148		-	-	91.2
29	propionyl-CoA carboxylase alpha chain, mitochondrial	141		-	-	61.3
30	Macrolide transporter subunit MacA	139	3D	4dk1D03	-	82.0
31	39S ribosomal protein L27, mitochondrial	133	3D	5oomW00	-	95.6
32	sn-glycerol-3-phosphate import ATP-binding protein UgpC	116		-	-	90.3
33	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	105		-	-	73.3
34	Spermidine/putrescine import ATP-binding protein PotA	104		-	-	83.6
35	Auxiliary transport protein, membrane fusion protein family	103		-	-	9.0
36	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	101		-	-	74.4
37	Molybdenum import ATP-binding protein ModC	100		-	-	48.6
38	50S ribosomal protein L27	95		-	-	70.1
39	HlyD family efflux transporter periplasmic adaptor subunit	86		-	-	61.2
40	Efflux transporter periplasmic adaptor subunit	85		-	-	97.3
41	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	85		-	-	69.2
42	50S ribosomal protein L27	81		-	-	89.5
44	exosome complex component RRP40	77	3D	6d6rG01	-	76.1
45	Glycine cleavage system H protein	76	3D	2edgA00	-	76.0
43	Multidrug resistance protein MdtN	74		-	-	21.5
46	RNA polymerase II subunit A C-terminal domain phosphatase	58		-	-	83.0
47	Exosome complex component RRP4	57		-	-	54.7
48	Protein Abitram	56		-	-	87.8
49	Auxiliary transport protein, membrane fusion protein family	55		-	-	7.1
51	50S ribosomal protein L27	54		-	-	70.2
50	Exosome complex component rrp4 protein	54		-	-	58.5
52	DNA-directed RNA polymerase subunit	53		-	-	35.6
53	DNA-directed RNA polymerase subunit beta	46		-	-	38.1
54	Exosome complex exonuclease RRP40	45		-	-	78.3
55	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	39	3D	1lacA00	-	78.3
56	Efflux RND transporter periplasmic adaptor subunit	34		-	-	27.8
63	Exosome complex component RRP4	31	3D	5vzjH01	-	72.6
58	ABC sugar transporter, ATP-binding subunit	27		-	-	35.0
57	Exosome complex component CSL4	27		-	-	83.2
59	Biotin/lipoyl attachment domain-containing protein	25		-	-	75.1
61	50S ribosomal protein L27	22		-	-	44.2
60	Apicoplast ribosomal protein L27	22		-	-	84.2
62	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	22		-	-	70.9
64	Exosome complex component RRP4, putative	21		-	-	4.1
65	2-oxoglutarate dehydrogenase E2 subunit	21		-	-	27.8
68	V-type ATP synthase alpha chain	20		-	-	19.5
66	Glycine cleavage system H protein	20		-	-	68.4
67	Glycerol-3-phosphate ABC transporter ATP-binding protein	20		-	-	19.5
69	Putative maltose ABC transporter, ATP-binding protein	19		-	-	50.0
71	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	18		-	-	12.4
72	Biotin carboxylase subunit of acetyl CoA carboxylase	18		-	-	51.3
73	Putative Exosome complex component RRP40	18		-	-	91.5
70	Mitochondrial ribosomal protein L27,putative	18		-	-	8.9
74	Glycine cleavage system H protein	17		-	-	10.2
75	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	17		-	-	12.3
76	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	16		-	-	33.8
77	Glycoside hydrolase family 43	16		-	-	97.7
79	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	16	3D	2l5tA00	-	77.6
78	Exosome complex component CSL4	15		-	-	2.4
80	Spermidine/putrescine ABC transporter, ATP-binding protein	14		-	-	55.1
82	Exosome complex component Rrp4	13		-	-	92.5
81	DNA-directed RNA polymerase subunit beta	13		-	-	1.9
83	DNA-directed RNA polymerase subunit beta	13		-	-	14.1
85	50S ribosomal protein L27	12		-	-	40.6
86	Molybdenum transport operon repressor MopB	12		-	-	69.9
84	AGAP005119-PA	12		-	-	73.7
89	Sugar ABC transporter ATP-binding protein	11		-	-	0.0
91	Molybdenum import ATP-binding protein ModC	11		-	-	11.1
90	Sugar ABC transporter ATP-binding protein SugC	11		-	-	2.2
87	Efflux RND transporter periplasmic adaptor subunit	11		-	-	0.0
88	ABC sugar transporter, ATP-binding protein	11		-	-	3.5
96	Exosome complex exonuclease RRP4, putative	10		-	-	78.6
92	EXOSome Multiexonuclease complex	10		-	-	18.4
94	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	10		-	-	6.1
95	Efflux transporter, RND family, MFP subunit	10		-	-	82.1
93	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	10		-	-	26.5
97	Exosome complex component RRP40	10		-	-	88.1
101	Exosome component 3	9		-	-	84.6
99	V-type ATP synthase alpha chain	9		-	-	9.6
98	Rrp40p	9		-	-	0.0
100	Carbohydrate ABC transporter ATP-binding protein CUT1 family	9		-	-	18.1
108	DNA-directed RNA polymerase subunit beta'	8		-	-	1.4
105	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	8		-	-	2.0
109	DNA-directed RNA polymerase subunit beta'	8		-	-	0.0
106	Carbamoyl-phosphate synthase L chain, ATP-binding	8		-	-	19.5
107	DNA-directed RNA polymerase subunit beta'	8		-	-	1.3
102	KGD2p Dihydrolipoyl transsuccinylase	8		-	-	0.0
104	Glycerol-3-phosphate ABC transporter ATP-binding protein	8		-	-	0.0
103	Cation efflux system protein	8		-	-	1.8
112	ABC transporter related protein	7		-	-	0.0
111	Oxaloacetate decarboxylase, alpha subunit	7		-	-	0.0
113	Membrane fusion protein MFP	7		-	-	0.0
110	Putative multidrug resistance protein	7		-	-	4.2
116	sn-glycerol-3-phosphate import ATP-binding protein UgpC	6		-	-	0.0
117	Multiple sugar ABC transporter ATP-bindingprotein	6		-	-	0.0
120	Molybdenum import ATP-binding protein ModC	6		-	-	0.0
121	Molybdenum ABC transporter ATP-binding protein	6		-	-	0.0
119	GD24941	6		-	-	11.3
115	Efflux RND transporter periplasmic adaptor subunit	6		-	-	10.7
122	Exosome complex exonuclease RRP4	6		-	-	80.2
118	ABC transporter ATP-binding protein	6		-	-	9.8
114	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	6		-	-	83.9
127	Sugar ABC transporter, ATP-binding protein	5		-	-	84.1
128	ABC transporter ATP-binding protein	5		-	-	0.0
129	ABC transporter related protein	5		-	-	10.7
124	Bll2173 protein	5		-	-	0.0
130	ABC transporter ATP-binding protein	5		-	-	2.6
125	Efflux transporter, RND family, MFP subunit	5		-	-	6.5
126	Putative periplasmic linker protein	5		-	-	3.6
123	Exosome complex component CSL4	5		-	-	9.1
132	Binding-protein-dependent transport system, ATP-binding component	4		-	-	0.0
149	Carbamoyl-phosphate synthase L chain, ATP binding domain protein	4	3D	4rcnB02	-	14.4
131	Predicted protein	4		-	-	89.2
133	Sodium:proton antiporter	4		-	-	3.9
153	Multidrug resistance protein VceA	3		-	-	0.0
136	RND family efflux transporter, MFP subunit	3		-	-	0.0
137	RND efflux membrane fusion protein	3		-	-	3.1
142	ABC transporter ATP-binding protein	3		-	-	0.0
147	Sll0180 protein	3		-	-	80.0
139	Exosome complex exonuclease subunit, putative	3		-	-	12.8
135	TOBE domain protein	3		-	-	0.0
145	Sugar ABC transporter, ATP-binding protein	3		-	-	0.0
152	Sugar ABC transporter ATP-binding protein	3		-	-	0.0
148	Vacuolar ATP synthase catalytic subunit A	3		-	-	6.3
141	Sugar ABC transporter ATP-binding protein	3		-	-	0.0
146	sn-glycerol-3-phosphate import ATP-binding protein UgpC	3		-	-	4.2
144	ABC transporter ATP-binding protein	3		-	-	2.5
151	Component of multidrug efflux system	3		-	-	0.0
138	Efflux transporter, RND family, MFP subunit	3		-	-	7.1
140	ABC transporter ATP-binding protein	3		-	-	10.0
150	Acetyl-CoA carboxylase/pyruvate carboxylase fusion protein, putative	3		-	-	3.2
143	ATP-binding subunit of an ABC-type osmolytetransporter	3		-	-	0.0
134	EXOSome Multiexonuclease complex	3		-	-	14.5
180	Ddl-3	2		-	-	0.0
191	Efflux pump, RND family, membrane fusion lipoprotein	2		-	-	43.4
187	Putative ABC transporter ATP-binding subunit	2		-	-	11.0
170	Exosome complex component Rrp4	2		-	-	0.0
155	Bll5772 protein	2		-	-	1.8
175	Uncharacterized protein	2		-	-	0.0
184	RND family efflux transporter MFP subunit	2		-	-	7.5
181	RND efflux system, membrane fusion protein CmeA	2		-	-	10.6
154	Efflux pump, RND family, membrane fusion protein	2		-	-	0.0
158	Ribosomal RNA processing protein 4	2		-	-	0.0
165	Efflux pump, RND family, membrane fusion lipoprotein	2		-	-	0.0
168	Putative exosome complex component rrp40	2		-	-	14.4
178	Acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase	2		-	-	11.1
161	Exosome complex component CSL4	2		-	-	0.0
174	ABC-type transport system ATP-binding protein Probable substrate glycerol-3-phosphate	2		-	-	0.0
188	Probable cation efflux system	2		-	-	0.0
183	RND family efflux transporter MFP subunit	2		-	-	7.3
157	Predicted protein	2		-	-	50.8
179	Pyruvate carboxylase	2		-	-	0.0
164	Uncharacterized protein	2		-	-	1.3
160	AT5G38890 protein	2		-	-	2.5
189	Probable cation efflux system CzcB-like	2		-	-	11.3
177	RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1	2		-	-	0.0
182	RND efflux system, membrane fusion protein CmeA	2		-	-	7.3
167	Cytochrome f	2		-	-	0.0
163	Uncharacterized protein	2		-	-	3.8
186	ABC-type transport system ATP-binding protein Probable substrate thiamine	2		-	-	0.0
173	ABC transporter, ATP binding protein Glucose	2		-	-	0.0
156	Uncharacterized protein	2		-	-	33.0
171	Sugar ABC transporter ATP-binding protein	2		-	-	0.0
176	Uncharacterized protein	2		-	-	7.2
159	Uncharacterized protein	2		-	-	0.0
162	Putative exosomal 3'-5' exoribonuclease complex subunit ski4	2		-	-	7.2
169	YALI0E33121p	2		-	-	0.0
190	Putative RND efflux membrane fusion protein	2		-	-	0.0
172	ABC transporter ATP-binding protein	2		-	-	0.0
166	HAE1 family effllux pump MFP component	2		-	-	4.9
185	Spermidine/putrescine ABC transporter ATP-binding	2		-	-	0.0
212	sn-glycerol-3-phosphate import ATP-binding protein UgpC	1		-	-	0.0
232	Fe 3+	1		-	-	0.0
225	Gll2840 protein	1		-	-	0.0
207	Putative glycine cleavage system H protein, mitochondrial	1		-	-	0.0
198	Uncharacterized protein	1		-	-	0.0
202	Uncharacterized protein	1		-	-	0.0
229	Protein CBR-LIN-7	1		-	-	0.0
222	Uncharacterized protein	1		-	-	0.0
217	Sugar ABC transportor, ATP-binding protein	1		-	-	0.0
209	Glr3987 protein	1		-	-	0.0
210	RND superfamily efflux pump MFP component	1		-	-	0.0
213	Sugar ABC transporter, ATP-binding protein	1		-	-	0.0
200	Uncharacterized protein	1		-	-	0.0
224	Sulfate/molybdate ABC transporter, ATP-binding protein	1		-	-	0.0
192	Probable membrane-fusion protein	1		-	-	0.0
233	Molybdenum import ATP-binding protein ModC	1		-	-	0.0
199	Uncharacterized protein	1		-	-	0.0
195	Predicted protein	1		-	-	0.0
203	Exosome complex component csl4	1		-	-	0.0
204	Uncharacterized protein	1		-	-	0.0
228	Sll0180 protein	1		-	-	0.0
211	ABC transporter ATP-binding protein	1		-	-	0.0
218	Iron III	1		-	-	0.0
193	Putative heavy metal efflux system protein	1		-	-	0.0
221	Uncharacterized protein	1		-	-	0.0
205	Uncharacterized protein	1		-	-	0.0
227	Putative ABC transporter ATP-binding protein MG187	1		-	-	0.0
230	Uncharacterized protein	1		-	-	0.0
214	ABC-type iron III	1		-	-	0.0
219	ABC transporter related	1		-	-	0.0
196	Predicted protein	1		-	-	0.0
206	Uncharacterized protein	1		-	-	0.0
194	Uncharacterized protein	1		-	-	0.0
220	Sugar ABC transporter, ATP-binding protein	1		-	-	0.0
226	Cytochrome f, chloroplastic	1		-	-	0.0
197	Exosome complex component RRP4	1		-	-	0.0
215	Cytoplasmic membrane protein for maltose uptake	1		-	-	0.0
208	Uncharacterized protein	1		-	-	0.0
201	Uncharacterized protein	1		-	-	0.0
231	ATPase H+-transporting V1 subunit A	1		-	-	0.0
223	Uncharacterized protein	1		-	-	0.0
216	Glr1290 protein	1		-	-	0.0