PDB 6dzk

PDB Information

PDB6DZK
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
Zinc depletion induces ribosome hibernation in mycobacteria.
Li, Y., Sharma, M.R., Koripella, R.K., Yang, Y., Kaushal, P.S., Lin, Q., Wade, J.T., Gray, T.A., Derbyshire, K.M., Agrawal, R.K., Ojha, A.K.
Proc. Natl. Acad. Sci. U.S.A.
HeaderRibosome
Released2018-07-05
Resolution3.600
CATH Insert Date23 Sep, 2018

PDB Images (44)

PDB Prints

PDB Chains (23)

Chain ID Date inserted into CATH CATH Status
A 23 Sep, 2018 Rejected
B 23 Sep, 2018 Rejected
C 23 Sep, 2018 Chopped
D 23 Sep, 2018 Holding pen
E 23 Sep, 2018 Holding pen
F 23 Sep, 2018 Chopped
g 23 Sep, 2018 Rejected
G 23 Sep, 2018 Holding pen
H 23 Sep, 2018 Chopped
I 23 Sep, 2018 Chopped
J 23 Sep, 2018 Chopped
K 23 Sep, 2018 Chopped
L 23 Sep, 2018 Chopped
M 23 Sep, 2018 Chopped
N 23 Sep, 2018 Chopped
O 23 Sep, 2018 Chopped
P 23 Sep, 2018 Chopped
Q 23 Sep, 2018 Chopped
r 23 Sep, 2018 Write scan list
S 23 Sep, 2018 Chopped
T 23 Sep, 2018 Chopped
V 23 Sep, 2018 Chopped
Y 23 Sep, 2018 Chopped

CATH Domains (20)

Domain ID Date inserted into CATH Superfamily CATH Status
6dzkC01 24 Sep, 2018 3.30.300.20 Assigned
6dzkC02 24 Sep, 2018 3.30.1140.32 Assigned
6dzkF00 24 Sep, 2018 Holding pen
6dzkH01 24 Sep, 2018 3.30.1370.30 Assigned
6dzkH02 24 Sep, 2018 3.30.1490.10 Assigned
6dzkI00 24 Sep, 2018 3.30.230.10 Assigned
6dzkJ00 24 Sep, 2018 3.30.70.600 Assigned
6dzkK00 24 Sep, 2018 3.30.420.80 Assigned
6dzkL00 24 Sep, 2018 2.40.50.140 Assigned
6dzkM01 24 Sep, 2018 1.10.8.50 Assigned
6dzkM02 24 Sep, 2018 4.10.910.10 Assigned
6dzkN01 24 Sep, 2018 1.10.287.1480 Assigned
6dzkO00 24 Sep, 2018 Holding pen
6dzkP00 24 Sep, 2018 Holding pen
6dzkQ00 24 Sep, 2018 2.40.50.140 Assigned
6dzkS00 24 Sep, 2018 3.30.860.10 Assigned
6dzkT00 24 Sep, 2018 1.20.58.110 Assigned
6dzkV01 24 Sep, 2018 3.40.50.10490 Assigned
6dzkV02 24 Sep, 2018 1.10.287.610 Assigned
6dzkY00 24 Sep, 2018 Write scan list

UniProtKB Entries (21)

Accession Gene ID Taxon Description
A0QSD7 RS3_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S3
A0A0D6J3X3 A0A0D6J3X3_MYCSM Mycolicibacterium smegmatis 30S ribosomal protein S6
A0QS96 RS12_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S12
A0QVQ3 RS15_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S15
A0QTK6 A0QTK6_MYCS2 Mycolicibacterium smegmatis MC2 155 Ribosome hibernation promoting factor
A0R554 A0R554_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L31
A0QVB8 RS2_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S2
A0QSL6 RS11_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S11
A0QV37 RS16_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S16
A0R549 RS181_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S18 1
A0R102 RS20_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S20
A0QSE0 RS17_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S17
A0QSP9 RS9_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S9
A0QSG6 RS5_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S5
A0QSD0 RS10_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S10
A0QSG3 RS8_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S8
A0R550 RS14_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S14
A0QSL7 RS4_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S4
A0QSL5 RS13_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S13
A0QS97 RS7_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S7
A0QSD5 RS19_MYCS2 Mycolicibacterium smegmatis MC2 155 30S ribosomal protein S19