PDB 6ddg

PDB Information

PDB6DDG
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
cryoEM-Guided Development of Antibiotics for Drug-Resistant Bacteria.
Belousoff, M.J., Venugopal, H., Wright, A., Seoner, S., Stuart, I., Stubenrauch, C., Bamert, R.S., Lupton, D.W., Lithgow, T.
ChemMedChem
HeaderRibosome/Antibiotic
Released2018-05-10
Resolution3.100
CATH Insert Date24 Mar, 2019

PDB Images (49)

PDB Prints

PDB Chains (27)

Chain ID Date inserted into CATH CATH Status
1 24 Mar, 2019 Rejected
2 24 Mar, 2019 Rejected
a 24 Mar, 2019 Chopped
A 24 Mar, 2019 Chopped
B 24 Mar, 2019 Chopped
C 24 Mar, 2019 Chopped
D 24 Mar, 2019 Chopped
E 24 Mar, 2019 Chopped
F 24 Mar, 2019 Chopped
G 24 Mar, 2019 Holding pen
H 24 Mar, 2019 Holding pen
I 24 Mar, 2019 Holding pen
J 24 Mar, 2019 Chopped
K 24 Mar, 2019 Chopped
L 24 Mar, 2019 Chopped
M 24 Mar, 2019 Chopped
N 24 Mar, 2019 Chopped
O 24 Mar, 2019 Chopped
P 24 Mar, 2019 Chopped
Q 24 Mar, 2019 Chopped
R 24 Mar, 2019 Rejected
S 24 Mar, 2019 Write scan list
V 24 Mar, 2019 Chopped
W 24 Mar, 2019 Chopped
X 24 Mar, 2019 Holding pen
Y 24 Mar, 2019 Chopped
Z 24 Mar, 2019 Chopped

CATH Domains (21)

Domain ID Date inserted into CATH Superfamily CATH Status
6ddgA00 25 Mar, 2019 Holding pen
6ddga01 25 Mar, 2019 3.30.420.100 Assigned
6ddgB01 25 Mar, 2019 2.40.50.140 Assigned
6ddgB02 25 Mar, 2019 Holding pen
6ddgB03 25 Mar, 2019 4.10.950.10 Assigned
6ddgC00 25 Mar, 2019 Holding pen
6ddgD00 25 Mar, 2019 Holding pen
6ddgE00 25 Mar, 2019 3.90.470.10 Assigned
6ddgF00 25 Mar, 2019 3.30.70.330 Assigned
6ddgJ00 25 Mar, 2019 Holding pen
6ddgK00 25 Mar, 2019 Holding pen
6ddgL00 25 Mar, 2019 Holding pen
6ddgM00 25 Mar, 2019 3.30.1390.20 Assigned
6ddgN01 25 Mar, 2019 Holding pen
6ddgO00 25 Mar, 2019 2.20.28.120 Assigned
6ddgP00 25 Mar, 2019 1.10.287.3980 Assigned
6ddgQ00 25 Mar, 2019 Holding pen
6ddgV00 25 Mar, 2019 Holding pen
6ddgW00 25 Mar, 2019 2.40.150.20 Assigned
6ddgY01 25 Mar, 2019 3.90.1170.10 Assigned
6ddgZ00 25 Mar, 2019 3.90.1030.10 Assigned

UniProtKB Entries (22)

Accession Gene ID Taxon Description
Q2FXQ1 RL20_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L20
P60430 RL2_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L2
Q2FY22 RL332_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L33 2
Q2FW22 RL18_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L18
P0A0F8 RL15_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L15
Q2FXT0 RL27_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L27
Q2FZ60 RL28_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L28
Q2FW14 RL29_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L29
Q2FW08 RL23_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L23
Q2FJE0 RL25_STAA3 Staphylococcus aureus subsp. aureus USA300 50S ribosomal protein L25
Q2FW38 RL13_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L13
Q2FXQ0 RL35_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L35
Q2FW11 RL22_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L22
Q2FUQ0 RL34_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L34
Q2FZ42 RL19_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L19
P0A0G2 RL30_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L30
Q2FW07 RL4_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L4
Q2FW33 RL17_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L17
Q2FW13 RL16_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L16
Q2FW16 RL14_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L14
Q2FW06 RL3_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L3
Q2FW17 RL24_STAA8 Staphylococcus aureus subsp. aureus NCTC 8325 50S ribosomal protein L24