PDB 5xyu
PDB Information
| PDB | 5XYU |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers.
Protein Cell
|
| Header | Ribosome |
| Released | 2017-07-10 |
| Resolution | 3.450 |
| CATH Insert Date | 14 Nov, 2017 |
PDB Images (39)
PDB Prints
PDB Chains (20)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 14 Nov, 2017 | Rejected |
| C | 14 Nov, 2017 | Chopped |
| D | 14 Nov, 2017 | Domchop review |
| E | 14 Nov, 2017 | Holding pen |
| F | 14 Nov, 2017 | Chopped |
| G | 14 Nov, 2017 | Holding pen |
| H | 14 Nov, 2017 | Chopped |
| I | 14 Nov, 2017 | Chopped |
| J | 14 Nov, 2017 | Chopped |
| K | 14 Nov, 2017 | Chopped |
| L | 14 Nov, 2017 | Chopped |
| M | 14 Nov, 2017 | Chopped |
| N | 14 Nov, 2017 | Chopped |
| O | 14 Nov, 2017 | Chopped |
| P | 14 Nov, 2017 | Chopped |
| Q | 14 Nov, 2017 | Chopped |
| R | 14 Nov, 2017 | Chopped |
| S | 14 Nov, 2017 | Chopped |
| T | 14 Nov, 2017 | Chopped |
| U | 14 Nov, 2017 | Rejected |
CATH Domains (18)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5xyuC01 | 10 Dec, 2017 | 3.30.300.20 | Assigned |
| 5xyuC02 | 10 Dec, 2017 | 3.30.1140.32 | Assigned |
| 5xyuF00 | 21 Feb, 2018 | Holding pen | |
| 5xyuH01 | 10 Dec, 2017 | 3.30.1370.30 | Assigned |
| 5xyuH02 | 10 Dec, 2017 | 3.30.1490.10 | Assigned |
| 5xyuI00 | 14 Dec, 2017 | 3.30.230.10 | Assigned |
| 5xyuJ00 | 10 Dec, 2017 | 3.30.70.600 | Assigned |
| 5xyuK00 | 10 Dec, 2017 | 3.30.420.80 | Assigned |
| 5xyuL00 | 10 Dec, 2017 | 2.40.50.140 | Assigned |
| 5xyuM01 | 10 Dec, 2017 | 1.10.8.50 | Assigned |
| 5xyuM02 | 10 Dec, 2017 | 4.10.910.10 | Assigned |
| 5xyuN00 | 10 Dec, 2017 | 4.10.830.10 | Assigned |
| 5xyuO00 | 10 Dec, 2017 | Holding pen | |
| 5xyuP00 | 16 Dec, 2017 | Holding pen | |
| 5xyuQ00 | 16 Dec, 2017 | 2.40.50.140 | Assigned |
| 5xyuR00 | 10 Dec, 2017 | 4.10.640.10 | Assigned |
| 5xyuS00 | 10 Dec, 2017 | 3.30.860.10 | Assigned |
| 5xyuT00 | 10 Dec, 2017 | 1.20.58.110 | Assigned |
UniProtKB Entries (18)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| A0QS96 | RS12_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S12 |
| A0QSL7 | RS4_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S4 |
| A0QSL5 | RS13_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S13 |
| A0QSP9 | RS9_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S9 |
| A0QS97 | RS7_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S7 |
| A0R7F9 | RS6_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S6 |
| A0R102 | RS20_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S20 |
| A0QSL6 | RS11_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S11 |
| A0QV37 | RS16_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S16 |
| A0QSG2 | RS14Z_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S14 type Z |
| A0QSE0 | RS17_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S17 |
| A0QSD7 | RS3_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S3 |
| A0QSG6 | RS5_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S5 |
| A0QSD0 | RS10_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S10 |
| A0R7F7 | RS182_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S18 2 |
| A0QVQ3 | RS15_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S15 |
| A0QSG3 | RS8_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S8 |
| A0QSD5 | RS19_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S19 |
