PDB Information

PDB5K36
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli
Gene SourceSaccharomyces cerevisiae (strain ATCC 204508 / S288c)
Primary Citation
Nuclear RNA Exosome at 3.1 angstrom Reveals Substrate Specificities, RNA Paths, and Allosteric Inhibition of Rrp44/Dis3.
Zinder, J.C., Wasmuth, E.V., Lima, C.D.
Mol.Cell
HeaderHydrolase/Rna
Released2016-05-19
Resolution3.100
CATH Insert Date20 Nov, 2016

PDB Images (30)

PDB Prints

PDB Chains (13)

Chain ID Date inserted into CATH CATH Status
A 21 Nov, 2016 Chopped
B 21 Nov, 2016 Chopped
C 21 Nov, 2016 Chopped
D 21 Nov, 2016 Chopped
E 21 Nov, 2016 Chopped
F 21 Nov, 2016 Chopped
G 21 Nov, 2016 Chopped
H 21 Nov, 2016 Chopped
I 21 Nov, 2016 Holding pen
J 21 Nov, 2016 Domchop review
K 21 Nov, 2016 Chopped
L 21 Nov, 2016 Rejected
M 21 Nov, 2016 Rejected

CATH Domains (16)

Domain ID Date inserted into CATH Superfamily CATH Status
5k36A00 24 Nov, 2016 3.30.230.70 Assigned
5k36B00 24 Nov, 2016 3.30.230.70 Assigned
5k36C00 16 Feb, 2017 3.30.230.70 Assigned
5k36D00 24 Nov, 2016 3.30.230.70 Assigned
5k36E00 24 Nov, 2016 3.30.230.70 Assigned
5k36F00 24 Nov, 2016 3.30.230.70 Assigned
5k36G01 24 Nov, 2016 2.40.50.100 Assigned
5k36G02 24 Nov, 2016 2.40.50.140 Assigned
5k36G03 24 Nov, 2016 3.30.1370.10 Assigned
5k36H01 30 Nov, 2016 2.40.50.100 Assigned
5k36H02 30 Nov, 2016 Holding pen
5k36K01 21 Feb, 2018 Holding pen
5k36K02 21 Feb, 2018 Holding pen
5k36K03 21 Feb, 2018 2.40.50.700 Assigned
5k36K04 21 Feb, 2018 Holding pen
5k36K05 21 Feb, 2018 2.40.50.140 Assigned

UniProtKB Entries (11)

Accession Gene ID Taxon Description
P25359 RRP43_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP43
Q08285 RRP40_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP40
Q12277 RRP42_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP42
Q12149 RRP6_YEAST Saccharomyces cerevisiae S288C Exosome complex exonuclease RRP6
Q08162 RRP44_YEAST Saccharomyces cerevisiae S288C Exosome complex exonuclease DIS3
P38792 RRP4_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP4
P53256 RRP46_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP46
Q05636 RRP45_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP45
P46948 RRP41_YEAST Saccharomyces cerevisiae S288C Exosome complex component SKI6
P48240 MTR3_YEAST Saccharomyces cerevisiae S288C Exosome complex component MTR3
P53859 CSL4_YEAST Saccharomyces cerevisiae S288C Exosome complex component CSL4