PDB Information

PDB4GKJ
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Expanded use of sense codons is regulated by modified cytidines in tRNA.
Cantara, W.A., Murphy, F.V., Demirci, H., Agris, P.F.
Proc.Natl.Acad.Sci.USA
HeaderRibosome/Antibiotic
Released2012-08-11
Resolution3.300
CATH Insert Date07 Jul, 2013

PDB Images (49)

PDB Prints

PDB Chains (23)

Chain ID Date inserted into CATH CATH Status
A 08 Jul, 2013 Rejected
B 08 Jul, 2013 Chopped
C 08 Jul, 2013 Chopped
D 08 Jul, 2013 Chopped
E 08 Jul, 2013 Chopped
F 08 Jul, 2013 Chopped
G 08 Jul, 2013 Chopped
H 08 Jul, 2013 Chopped
I 08 Jul, 2013 Chopped
J 08 Jul, 2013 Chopped
K 08 Jul, 2013 Chopped
L 08 Jul, 2013 Chopped
M 08 Jul, 2013 Chopped
N 08 Jul, 2013 Chopped
O 08 Jul, 2013 Chopped
P 08 Jul, 2013 Chopped
Q 08 Jul, 2013 Chopped
R 08 Jul, 2013 Chopped
S 08 Jul, 2013 Chopped
T 08 Jul, 2013 Chopped
V 08 Jul, 2013 Rejected
W 08 Jul, 2013 Rejected
X 08 Jul, 2013 Rejected

CATH Domains (25)

Domain ID Date inserted into CATH Superfamily CATH Status
4gkjB01 09 Aug, 2013 3.40.50.10490 Assigned
4gkjB02 09 Aug, 2013 1.10.287.610 Assigned
4gkjC01 09 Aug, 2013 3.30.300.20 Assigned
4gkjC02 09 Aug, 2013 3.30.1140.32 Assigned
4gkjD01 09 Aug, 2013 1.10.1050.10 Assigned
4gkjD02 09 Aug, 2013 3.10.290.10 Assigned
4gkjE01 09 Aug, 2013 3.30.160.20 Assigned
4gkjE02 09 Aug, 2013 3.30.230.10 Assigned
4gkjF00 09 Aug, 2013 3.30.70.60 Assigned
4gkjG00 09 Aug, 2013 1.10.455.10 Assigned
4gkjH01 09 Aug, 2013 3.30.1370.30 Assigned
4gkjH02 09 Aug, 2013 3.30.1490.10 Assigned
4gkjI00 09 Aug, 2013 3.30.230.10 Assigned
4gkjJ00 09 Aug, 2013 3.30.70.600 Assigned
4gkjK00 09 Aug, 2013 3.30.420.80 Assigned
4gkjL00 09 Aug, 2013 2.40.50.140 Assigned
4gkjM01 09 Aug, 2013 1.10.8.50 Assigned
4gkjM02 09 Aug, 2013 4.10.910.10 Assigned
4gkjN00 09 Aug, 2013 4.10.830.10 Assigned
4gkjO00 09 Aug, 2013 1.10.287.10 Assigned
4gkjP00 09 Aug, 2013 3.30.1320.10 Assigned
4gkjQ00 09 Aug, 2013 2.40.50.140 Assigned
4gkjR00 09 Aug, 2013 4.10.640.10 Assigned
4gkjS00 09 Aug, 2013 3.30.860.10 Assigned
4gkjT00 09 Aug, 2013 1.20.58.110 Assigned

UniProtKB Entries (19)

Accession Gene ID Taxon Description
P17291 RS7_THET8 Thermus thermophilus HB8 30S ribosomal protein S7
Q5SHN3 RS12_THET8 Thermus thermophilus HB8 30S ribosomal protein S12
P0DOY9 RS8_THET8 Thermus thermophilus HB8 30S ribosomal protein S8
P80380 RS20_THET8 Thermus thermophilus HB8 30S ribosomal protein S20
P80374 RS9_THET8 Thermus thermophilus HB8 30S ribosomal protein S9
Q5SJH3 RS16_THET8 Thermus thermophilus HB8 30S ribosomal protein S16
Q5SJ76 RS15_THET8 Thermus thermophilus HB8 30S ribosomal protein S15
Q5SHQ5 RS5_THET8 Thermus thermophilus HB8 30S ribosomal protein S5
P80377 RS13_THET8 Thermus thermophilus HB8 30S ribosomal protein S13
P80376 RS11_THET8 Thermus thermophilus HB8 30S ribosomal protein S11
A0A0N0BLS5 RS17_THEAQ Thermus aquaticus 30S ribosomal protein S17
Q5SHN7 RS10_THET8 Thermus thermophilus HB8 30S ribosomal protein S10
Q5SHP2 RS19_THET8 Thermus thermophilus HB8 30S ribosomal protein S19
P80373 RS4_THET8 Thermus thermophilus HB8 30S ribosomal protein S4
A0A0N0BLP2 RS14Z_THEAQ Thermus aquaticus 30S ribosomal protein S14 type Z
P80372 RS3_THET8 Thermus thermophilus HB8 30S ribosomal protein S3
Q5SLP8 RS6_THET8 Thermus thermophilus HB8 30S ribosomal protein S6
P80371 RS2_THET8 Thermus thermophilus HB8 30S ribosomal protein S2
Q5SLQ0 RS18_THET8 Thermus thermophilus HB8 30S ribosomal protein S18