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PDB Information
| PDB | 4DR5 |
| Method | X-RAY DIFFRACTION |
| Host Organism | |
| Gene Source | |
| Primary Citation |
A structural basis for streptomycin-induced misreading of the genetic code.
Demirci, H., Murphy, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
Nat Commun
|
| Header | Ribosome/Antibiotic |
| Released | 2012-02-16 |
| Resolution | 3.450 |
| CATH Insert Date | 18 Nov, 2012 |
PDB Images (49)
4dr5B01
CATH Domain 4dr5B01
4dr5B02
CATH Domain 4dr5B02
4dr5C01
CATH Domain 4dr5C01
4dr5C02
CATH Domain 4dr5C02
4dr5D01
CATH Domain 4dr5D01
4dr5D02
CATH Domain 4dr5D02
4dr5E01
CATH Domain 4dr5E01
4dr5E02
CATH Domain 4dr5E02
4dr5F00
CATH Domain 4dr5F00
4dr5G00
CATH Domain 4dr5G00
4dr5H01
CATH Domain 4dr5H01
4dr5H02
CATH Domain 4dr5H02
4dr5I00
CATH Domain 4dr5I00
4dr5J00
CATH Domain 4dr5J00
4dr5K00
CATH Domain 4dr5K00
4dr5L00
CATH Domain 4dr5L00
4dr5M01
CATH Domain 4dr5M01
4dr5M02
CATH Domain 4dr5M02
4dr5N00
CATH Domain 4dr5N00
4dr5O00
CATH Domain 4dr5O00
4dr5P00
CATH Domain 4dr5P00
4dr5Q00
CATH Domain 4dr5Q00
4dr5R00
CATH Domain 4dr5R00
4dr5S00
CATH Domain 4dr5S00
4dr5T00
CATH Domain 4dr5T00
PDB Chains (23)
| Chain ID | Date inserted into CATH | CATH Status |
| A | 19 Nov, 2012 | Rejected
|
| B | 19 Nov, 2012 | Chopped
|
| C | 19 Nov, 2012 | Chopped
|
| D | 19 Nov, 2012 | Chopped
|
| E | 19 Nov, 2012 | Chopped
|
| F | 19 Nov, 2012 | Chopped
|
| G | 19 Nov, 2012 | Chopped
|
| H | 19 Nov, 2012 | Chopped
|
| I | 19 Nov, 2012 | Chopped
|
| J | 19 Nov, 2012 | Chopped
|
| K | 19 Nov, 2012 | Chopped
|
| L | 19 Nov, 2012 | Chopped
|
| M | 19 Nov, 2012 | Chopped
|
| N | 19 Nov, 2012 | Chopped
|
| O | 19 Nov, 2012 | Chopped
|
| P | 19 Nov, 2012 | Chopped
|
| Q | 19 Nov, 2012 | Chopped
|
| R | 19 Nov, 2012 | Chopped
|
| S | 19 Nov, 2012 | Chopped
|
| T | 19 Nov, 2012 | Chopped
|
| U | 19 Nov, 2012 | Rejected
|
| V | 19 Nov, 2012 | Rejected
|
| W | 19 Nov, 2012 | Rejected
|
CATH Domains (25)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
| 4dr5B01 | 02 Jan, 2013 | 3.40.50.10490 | Assigned
|
| 4dr5B02 | 02 Jan, 2013 | 1.10.287.610 | Assigned
|
| 4dr5C01 | 02 Jan, 2013 | 3.30.300.20 | Assigned
|
| 4dr5C02 | 02 Jan, 2013 | 3.30.1140.32 | Assigned
|
| 4dr5D01 | 02 Jan, 2013 | 1.10.1050.10 | Assigned
|
| 4dr5D02 | 02 Jan, 2013 | 3.10.290.10 | Assigned
|
| 4dr5E01 | 02 Jan, 2013 | 3.30.160.20 | Assigned
|
| 4dr5E02 | 02 Jan, 2013 | 3.30.230.10 | Assigned
|
| 4dr5F00 | 02 Jan, 2013 | 3.30.70.60 | Assigned
|
| 4dr5G00 | 02 Jan, 2013 | 1.10.455.10 | Assigned
|
| 4dr5H01 | 08 Feb, 2013 | 3.30.1370.30 | Assigned
|
| 4dr5H02 | 08 Feb, 2013 | 3.30.1490.10 | Assigned
|
| 4dr5I00 | 02 Jan, 2013 | 3.30.230.10 | Assigned
|
| 4dr5J00 | 02 Jan, 2013 | 3.30.70.600 | Assigned
|
| 4dr5K00 | 02 Jan, 2013 | 3.30.420.80 | Assigned
|
| 4dr5L00 | 02 Jan, 2013 | 2.40.50.140 | Assigned
|
| 4dr5M01 | 02 Jan, 2013 | 1.10.8.50 | Assigned
|
| 4dr5M02 | 02 Jan, 2013 | 4.10.910.10 | Assigned
|
| 4dr5N00 | 02 Jan, 2013 | 4.10.830.10 | Assigned
|
| 4dr5O00 | 08 Feb, 2013 | 1.10.287.10 | Assigned
|
| 4dr5P00 | 08 Feb, 2013 | 3.30.1320.10 | Assigned
|
| 4dr5Q00 | 08 Feb, 2013 | 2.40.50.140 | Assigned
|
| 4dr5R00 | 02 Jan, 2013 | 4.10.640.10 | Assigned
|
| 4dr5S00 | 03 Jan, 2013 | 3.30.860.10 | Assigned
|
| 4dr5T00 | 02 Jan, 2013 | 1.20.58.110 | Assigned
|
UniProtKB Entries (19)
| Accession |
Gene ID |
Taxon |
Description |
| Q5SJ76 |
RS15_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S15 |
| P17291 |
RS7_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S7 |
| A0A0N0BLS5 |
RS17_THEAQ |
Thermus aquaticus |
30S ribosomal protein S17 |
| P80380 |
RS20_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S20 |
| Q5SHN7 |
RS10_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S10 |
| P80371 |
RS2_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S2 |
| P80373 |
RS4_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S4 |
| Q5SHQ5 |
RS5_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S5 |
| Q5SJH3 |
RS16_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S16 |
| P0DOY9 |
RS8_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S8 |
| Q5SLQ0 |
RS18_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S18 |
| P80376 |
RS11_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S11 |
| F6DEQ7 |
F6DEQ7_THETG |
Thermus thermophilus SG0.5JP17-16 |
30S ribosomal protein S12 |
| P80374 |
RS9_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S9 |
| Q5SHP2 |
RS19_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S19 |
| P80377 |
RS13_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S13 |
| P80372 |
RS3_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S3 |
| Q5SLP8 |
RS6_THET8 |
Thermus thermophilus HB8 |
30S ribosomal protein S6 |
| A0A0N0BLP2 |
RS14Z_THEAQ |
Thermus aquaticus |
30S ribosomal protein S14 type Z |