PDB 2vqe

PDB Information

PDB2VQE
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Modified Uridines with C5-Methylene Substituents at the First Position of the tRNA Anticodon Stabilize U.G Wobble Pairing During Decoding.
Kurata, S., Weixlbaumer, A., Ohtsuki, T., Shimazaki, T., Wada, T., Kirino, Y., Takai, K., Watanabe, K., Ramakrishnan, V., Suzuki, T.
J.Biol.Chem.
HeaderRibosome
Released2008-03-13
Resolution2.500
CATH Insert Date01 May, 2008

PDB Images (49)

PDB Prints

PDB Chains (23)

Chain ID Date inserted into CATH CATH Status
A 01 May, 2008 Rejected
B 01 May, 2008 Chopped
C 01 May, 2008 Chopped
D 01 May, 2008 Chopped
E 01 May, 2008 Chopped
F 01 May, 2008 Chopped
G 01 May, 2008 Chopped
H 01 May, 2008 Chopped
I 01 May, 2008 Chopped
J 01 May, 2008 Chopped
K 01 May, 2008 Chopped
L 01 May, 2008 Chopped
M 01 May, 2008 Chopped
N 01 May, 2008 Chopped
O 01 May, 2008 Chopped
P 01 May, 2008 Chopped
Q 01 May, 2008 Chopped
R 01 May, 2008 Chopped
S 01 May, 2008 Chopped
T 01 May, 2008 Chopped
U 01 May, 2008 Rejected
X 01 May, 2008 Rejected
Y 01 May, 2008 Rejected

CATH Domains (25)

Domain ID Date inserted into CATH Superfamily CATH Status
2vqeB01 30 Jul, 2008 3.40.50.10490 Assigned
2vqeB02 30 Jul, 2008 1.10.287.610 Assigned
2vqeC01 02 May, 2008 3.30.300.20 Assigned
2vqeC02 02 May, 2008 3.30.1140.32 Assigned
2vqeD01 02 May, 2008 1.10.1050.10 Assigned
2vqeD02 02 May, 2008 3.10.290.10 Assigned
2vqeE01 02 May, 2008 3.30.160.20 Assigned
2vqeE02 02 May, 2008 3.30.230.10 Assigned
2vqeF00 02 May, 2008 3.30.70.60 Assigned
2vqeG00 02 May, 2008 1.10.455.10 Assigned
2vqeH01 02 May, 2008 3.30.1370.30 Assigned
2vqeH02 02 May, 2008 3.30.1490.10 Assigned
2vqeI00 02 May, 2008 3.30.230.10 Assigned
2vqeJ00 02 May, 2008 3.30.70.600 Assigned
2vqeK00 02 May, 2008 3.30.420.80 Assigned
2vqeL00 02 May, 2008 2.40.50.140 Assigned
2vqeM01 02 May, 2008 1.10.8.50 Assigned
2vqeM02 02 May, 2008 4.10.910.10 Assigned
2vqeN00 02 May, 2008 4.10.830.10 Assigned
2vqeO00 02 May, 2008 1.10.287.10 Assigned
2vqeP00 02 May, 2008 3.30.1320.10 Assigned
2vqeQ00 02 May, 2008 2.40.50.140 Assigned
2vqeR00 02 May, 2008 4.10.640.10 Assigned
2vqeS00 02 May, 2008 3.30.860.10 Assigned
2vqeT00 02 May, 2008 1.20.58.110 Assigned

UniProtKB Entries (19)

Accession Gene ID Taxon Description
Q5SJ76 RS15_THET8 Thermus thermophilus HB8 30S ribosomal protein S15
P62661 RS20_THET2 Thermus thermophilus HB27 30S ribosomal protein S20
P80372 RS3_THET8 Thermus thermophilus HB8 30S ribosomal protein S3
Q5SHP2 RS19_THET8 Thermus thermophilus HB8 30S ribosomal protein S19
Q5SJH3 RS16_THET8 Thermus thermophilus HB8 30S ribosomal protein S16
P80382 RS18_THETH Thermus thermophilus 30S ribosomal protein S18
Q5SHN3 RS12_THET8 Thermus thermophilus HB8 30S ribosomal protein S12
P0DOY9 RS8_THET8 Thermus thermophilus HB8 30S ribosomal protein S8
P80371 RS2_THET8 Thermus thermophilus HB8 30S ribosomal protein S2
P80373 RS4_THET8 Thermus thermophilus HB8 30S ribosomal protein S4
P17291 RS7_THET8 Thermus thermophilus HB8 30S ribosomal protein S7
P62669 RS9_THET2 Thermus thermophilus HB27 30S ribosomal protein S9
P80376 RS11_THET8 Thermus thermophilus HB8 30S ribosomal protein S11
Q5SLP8 RS6_THET8 Thermus thermophilus HB8 30S ribosomal protein S6
A0A0N0BLP2 RS14Z_THEAQ Thermus aquaticus 30S ribosomal protein S14 type Z
Q5SHQ5 RS5_THET8 Thermus thermophilus HB8 30S ribosomal protein S5
P24321 RS17_THETH Thermus thermophilus 30S ribosomal protein S17
P80377 RS13_THET8 Thermus thermophilus HB8 30S ribosomal protein S13
Q5SHN7 RS10_THET8 Thermus thermophilus HB8 30S ribosomal protein S10