The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Probable brix-domain ribosomal biogenesis protein
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Superfamily: Brix domain

This superfamily represents the Brix (biogenesis of ribosomes in Xenopus) domain, first characterised in the Brix protein. It is a structural domain found in a variety of proteins from different species, such as archaea and eukaryotes: Peter Pan (D. melanogaster) and SSF1/2 (S.cerevisiae), RPFAM:PF1 (S. cerevisiae), IMP4 (S. cerevisiae), Brix (X.laevis) and BRX1 (S. cerevisiae) and RPFAM:PF2 (S.cerevisiae).

Typically, a protein sequence belonging to the Brix domain superfamily contains a highly charged N-terminal segment (about 50 residues) followed by a single copy of the Brix domain and another highly charged C-terminal region (about 100 residues). The archaean sequences have two unique characteristics: (1) the charged regions are totally absent at the N terminus and are reduced in number to about 10 residues at the C terminus; and (2) the C-terminal part of the Brix domain itself is minimal. Two eukaryote groups have large insertions within the C-terminal region: about 70 residues in the group III and about 120 in the group II. Biological data for some proteins in this family suggest a role in ribosome biogenesis and rRNA binding.

PFAM:PF04427, INTERPRO:IPR007109,PMID:11406393,PMID:11246005

GO Diversity

Unique GO annotations
31 Unique GO terms

EC Diversity

Unique EC annotations
0 Unique EC terms

Species Diversity

Unique species annotations
1845 Unique species

Sequence/Structure Diversity

Overview of the sequence / structure diversity of this superfamily compared to other superfamilies in CATH. Click on the chart to view the data in more detail.

Superfamily Summary

A general summary of information for this superfamily.
Structures
Domains: 3
Domain clusters (>95% seq id): 2
Domain clusters (>35% seq id): 2
Unique PDBs: 2
Alignments
Structural Clusters (5A): 1
Structural Clusters (9A): 1
FunFam Clusters: 18
Function
Unique EC:
Unique GO: 31
Taxonomy
Unique Species: 1845