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CATH Superfamily 3.30.1490.180

RNA polymerase ii

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
RNA polymerase ii
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Browse Functional Families

ID Function Family (FunFam) Name Total Sequences Enzyme? Structure? Structural Representative PDB Sites? Alignment Diversity (0-100)
1
DNA-directed RNA polymerase subunit
1027
3D
 3h3vB04 - 89.5
2
DNA-directed RNA polymerase subunit
358
3D
 5fj8A04 - 89.5
3
DNA-directed RNA polymerase subunit
303
3D
 4c2mP04 - 90.4
4
DNA-directed RNA polymerase subunit
89 - - 86.2
5
DNA-directed RNA polymerase subunit
52 - - 88.8
6
DNA-directed RNA polymerase subunit
33 - - 92.3
7
DNA-directed RNA polymerase subunit
21 - - 65.4
8
DNA-directed RNA polymerase subunit
20 - - 6.6
9
DNA-directed RNA polymerase subunit
17 - - 7.9
10
DNA-directed RNA polymerase subunit
15 - - 0.0
11
DNA-directed RNA polymerase I largest subunit
11 - - 41.1
12
DNA-directed RNA polymerase subunit
7 - - 3.2
14
DNA-directed RNA polymerase subunit
6 - - 0.0
13
DNA-directed RNA polymerase subunit
6 - - 51.5
18
DNA-directed RNA polymerase subunit
5 - - 6.0
17
DNA-directed RNA polymerase IV subunit 1
5 - - 0.0
16
DNA-directed RNA polymerase subunit
5 - - 11.0
15
DNA-directed RNA polymerase subunit
5 - - 34.5
20
DNA-directed RNA polymerase subunit
4 - - 0.0
19
DNA-directed RNA polymerase subunit
4 - - 0.0
21
DNA-directed RNA polymerase subunit
3 - - 0.0
22
DNA-directed RNA polymerase subunit
3 - - 0.0
29
DNA-directed RNA polymerase subunit
2 - - 0.0
26
DNA-directed RNA polymerase subunit
2 - - 0.0
27
Putative rna polymerase iii large subunit
2 - - 1.6
23
DNA-directed RNA polymerase subunit
2 - - 0.0
28
DNA-directed RNA polymerase I subunit rpa1
2 - - 10.2
30
RNA polymerase Rpb1, domain 2 family protein
2 - - 0.0
25
DNA-directed RNA polymerase subunit
2 - - 0.0
24
DNA-directed RNA polymerase subunit
2 - - 15.7
39
DNA-directed RNA polymerase subunit
1 - - 0.0
36
Uncharacterized protein
1 - - 0.0
31
DNA-directed RNA polymerase subunit
1 - - 0.0
40
DNA-directed RNA polymerase subunit
1 - - 0.0
37
DNA-directed RNA polymerase subunit
1 - - 0.0
41
DNA-directed RNA polymerase subunit
1 - - 0.0
33
Uncharacterized protein
1 - - 0.0
38
DNA-directed RNA polymerase subunit
1 - - 0.0
35
DNA-directed RNA polymerase subunit
1 - - 0.0
32
Uncharacterized protein
1 - - 0.0
34
DNA-directed RNA polymerase subunit
1 - - 0.0