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CATH Superfamily 2.170.120.40

YbbR-like domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
YbbR-like domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Superfamily: YbbR-like domain

This superfamily includes hypothetical bacterial proteins of unknown function, that are similar to the YbbR protein expressed by Bacillus subtilis (O34659 O87088). Bacillus subtilis CdaR regulates CdaA, a diadenylate cyclase that contributes to cell division PMID:26527648. One member (Q97EN2) is annotated as an uncharacterised secreted protein, whereas another member (P43521) is described as a hypothetical protein in the 5'region of the def gene of Thermus thermophilus, which encodes a deformylase but no further information was found in either case. This region is found repeated up to four times in many members of this family.

PFAM:PF07949, INTERPRO:IPR012505

GO Diversity

Unique GO annotations
1 Unique GO terms

EC Diversity

Unique EC annotations
0 Unique EC terms

Species Diversity

Unique species annotations
3981 Unique species

Sequence/Structure Diversity

Overview of the sequence / structure diversity of this superfamily compared to other superfamilies in CATH. Click on the chart to view the data in more detail.

Superfamily Summary

A general summary of information for this superfamily.
Structures
Domains: 1
Domain clusters (>95% seq id): 1
Domain clusters (>35% seq id): 1
Unique PDBs: 1
Alignments
Structural Clusters (5A): 1
Structural Clusters (9A): 1
FunFam Clusters: 15
Function
Unique EC:
Unique GO: 1
Taxonomy
Unique Species: 3981