CATH Classification

Domain Context

CATH Clusters

Superfamily 2.60.120.200
Functional Family

Enzyme Information

3.2.1.178
Beta-porphyranase.
based on mapping to UniProt D7GXF9
Hydrolysis of beta-D-galactopyranose-(1->4)-alpha-L-galactopyranose-6- sulfate linkages in porphyran.
-!- The backbone of porphyran consists largely (approximately 70%) of (1->3)-linked beta-D-galactopyranose followed by (1->4)-linked alpha- L-galactopyranose-6-sulfate (the other 30% are mostly agarobiose repeating units of (1->3)-linked beta-D-galactopyranose followed by (1->4)-linked 3,6-anhydro-alpha-L-galactopyranose). -!- This enzyme cleaves the (1->4) linkages between beta-D- galactopyranose and alpha-L-galactopyranose-6-sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6-sulfate-(1->3)-beta-D- galactose, although some longer oligosaccharides of even number of residues are also observed. -!- Since the enzyme is inactive on the non-sulfated agarose portion of the porphyran backbone, some agarose fragments are also included in the products. -!- Methylation of the D-galactose prevents its binding at position -1.

UniProtKB Entries (1)

D7GXF9
PORB_ZOBGA
Zobellia galactanivorans
Beta-porphyranase B

PDB Structure

PDB 3JUU
External Links
Method X-RAY DIFFRACTION
Organism
Primary Citation
Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota.
Hehemann, J.H., Correc, G., Barbeyron, T., Helbert, W., Czjzek, M., Michel, G.
Nature